Pregenerated sensors for ZDHHC18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037553Ensembl transcript IDs: ENSMUST00000084238.5
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGTCGGGGCAGGTCACAGCTGGGAGCCTAACCTGGGGGCTGGGTaGTGGCGTCTAAAGGGCCGGAGCGGGTGGTCTCTCTCCTGTGAC | + |
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Preference number: 1 (lower is better) Translates to: PVGAGHSWEPNLGAG*WRLKGRSGWSLSCD Trigger: GTCACAGGAGAGAGACCACCCGCTCCGGCCCTTTAGACGCCACCACCCAGCCCCCAGGTTAGGCTCCCAGCTGTGACCTGCCCCGACAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR CCA 90 bp | GTAGGACAGGCTGGGGGACGGGACGGACCCTGTAGGCACAGATGGTaGCAGATGGGCCACAGGTTAGGCAGGTGGAGGTGCCGGGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: VGQAGGRDGPCRHRW*QMGHRLGRWRCRVP Trigger: AGGCACCCGGCACCTCCACCTGCCTAACCTGTGGCCCATCTGCCACCATCTGTGCCTACAGGGTCCGTCCCGTCCCCCAGCCTGTCCTAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR CCA 90 bp | GGAAAAGACTGGCAGCTCTGGCGGCTCTGCTTCCCTCAGATGGCATaGGGAGGGTCCCCGCAGGTGTGGAGGACGGCAGGTGGCAAGCAC | + |
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Preference number: 1 (lower is better) Translates to: GKDWQLWRLCFPQMA*GGSPQVWRTAGGKH Trigger: GTGCTTGCCACCTGCCGTCCTCCACACCTGCGGGGACCCTCCCCATGCCATCTGAGGGAAGCAGAGCCGCCAGAGCTGCCAGTCTTTTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR TCA 90 bp | TGGGTGGTGGCGTCTAAAGGGCCGGAGCGGGTGGTCTCTCTCCTGTaGCTAACACAGCCTCCCACCCAGTCCCCCATACCTCAGGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: WVVASKGPERVVSLL*LTQPPTQSPIPQAA Trigger: AGCAGCCTGAGGTATGGGGGACTGGGTGGGAGGCTGTGTTAGTCACAGGAGAGAGACCACCCGCTCCGGCCCTTTAGACGCCACCACCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR GCA 90 bp | GCCACAGCCCCCTCGACTCCTCAGAGTTCCCACCAATCACTGGGCTaGCCGCCTGCCTGCCTGCTCTCTAACTCCCAGGAAAAGACCCGA | + |
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Preference number: 1 (lower is better) Translates to: ATAPSTPQSSHQSLG*PPACLLSNSQEKTR Trigger: TCGGGTCTTTTCCTGGGAGTTAGAGAGCAGGCAGGCAGGCGGGCAGCCCAGTGATTGGTGGGAACTCTGAGGAGTCGAGGGGGCTGTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR CCA 90 bp | GCTGAGGCTGCGGTATGGCTTTCTACACTCTGGCCAGCAAGGAGTTaGGGTTCCTGGACTAGAGCCCAGCGCCTGCCCACTGTTGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: AEAAVWLSTLWPARS*GSWTRAQRLPTVGG Trigger: CCCACCAACAGTGGGCAGGCGCTGGGCTCTAGTCCAGGAACCCCAACTCCTTGCTGGCCAGAGTGTAGAAAGCCATACCGCAGCCTCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR TCA 90 bp | CAGGCAGTGACTTGGCATGGTCTCCTTAGTGGCCTCCAGAGGCTGTaGCTCTCCTCTCCTGCCACTGACCAGCTAGGGGGCCTAAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: QAVTWHGLLSGLQRL*LSSPATDQLGGLRP Trigger: AGGCCTTAGGCCCCCTAGCTGGTCAGTGGCAGGAGAGGAGAGTCACAGCCTCTGGAGGCCACTAAGGAGACCATGCCAAGTCACTGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR GCA 90 bp | CAAGGTCCAAGCACGCCTCCAGCTAGGAGGCCACCATTCAGTTCATaGCCTCACTCAGGCTGGGTCTCCCTCCCACAGGCAGTGACTTGG | + |
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Preference number: 1 (lower is better) Translates to: QGPSTPPARRPPFSS*PHSGWVSLPQAVTW Trigger: CCAAGTCACTGCCTGTGGGAGGGAGACCCAGCCTGAGTGAGGGCATGAACTGAATGGTGGCCTCCTAGCTGGAGGCGTGCTTGGACCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR CCA 90 bp | TACTGTGCTGCCCAGGACTCTACAGGAGCTGAGGTTCTGCGGGCCTaGATGGCTTGTTTGGCTTCCCCTGACACAGGCTGCTTCCCACCC | + |
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Preference number: 1 (lower is better) Translates to: YCAAQDSTGAEVLRA*MACLASPDTGCFPP Trigger: GGGTGGGAAGCAGCCTGTGTCAGGGGAAGCCAAACAAGCCATCCAGGCCCGCAGAACCTCAGCTCCTGTAGAGTCCTGGGCAGCACAGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR CCA 90 bp | CCATCTCCCAGTGGCCCCTGGCACCCACCACTTCCCAGCTTTGTCTaGGACCCACTGGGCTCTGGAACAAGGAGAGGACTCAGTAGTGAC | + |
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Preference number: 1 (lower is better) Translates to: PSPSGPWHPPLPSFV*DPLGSGTRRGLSSD Trigger: GTCACTACTGAGTCCTCTCCTTGTTCCAGAGCCCAGTGGGTCCCAGACAAAGCTGGGAAGTGGTGGGTGCCAGGGGCCACTGGGAGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR CCA 90 bp | AGGACTCTACAGGAGCTGAGGTTCTGCGGGCCTGGATGGCTTGTTTaGCTTCCCCTGACACAGGCTGCTTCCCACCCCTGCTTGCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: RTLQELRFCGPGWLV*LPLTQAASHPCLLS Trigger: AGAGAGCAAGCAGGGGTGGGAAGCAGCCTGTGTCAGGGGAAGCCAAACAAGCCATCCAGGCCCGCAGAACCTCAGCTCCTGTAGAGTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR CCA 90 bp | GAACTGCCATTGCCAGCACACACGCCACACCACACACCGGACAGATaGATGGACTCCATGGGGTTGGTGAGGCATGCGATGACGGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: ELPLPAHTPHHTPDR*MDSMGLVRHAMTVG Trigger: TCCCACCGTCATCGCATGCCTCACCAACCCCATGGAGTCCATCCATCTGTCCGGTGTGTGGTGTGGCGTGTGTGCTGGCAATGGCAGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR CCA 90 bp | AGGTGGGACAAGACTAAGAGCCTTCTGTTTGGGGCAGAGGAGCCCTaGGAACTGCCATTGCCAGCACACACGCCACACCACACACCGGAC | + |
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Preference number: 1 (lower is better) Translates to: RWDKTKSLLFGAEEP*ELPLPAHTPHHTPD Trigger: GTCCGGTGTGTGGTGTGGCGTGTGTGCTGGCAATGGCAGTTCCCAGGGCTCCTCTGCCCCAAACAGAAGGCTCTTAGTCTTGTCCCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR CCA 90 bp | CAGAGAGTGGCGGTCCTCAGGAGCTCCTTAAGCCCCCGCACAGACTaGATGATCGCGGCAGGATGGCAAAGGAGGAGAAGAGAGAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: QRVAVLRSSLSPRTD*MIAAGWQRRRRERV Trigger: AACCCTCTCTCTTCTCCTCCTTTGCCATCCTGCCGCGATCATCCAGTCTGTGCGGGGGCTTAAGGAGCTCCTGAGGACCGCCACTCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR CCA 90 bp | ACGAAGCTGATCTCCCCAGGTCTGACCCTGCTCCCTTTGGGTCCTTaGAAGAACATGGAGCTGTCTAGCCCTTGCTGCCTGGGGCCAAGG | + |
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Preference number: 1 (lower is better) Translates to: TKLISPGLTLLPLGP*KNMELSSPCCLGPR Trigger: CCTTGGCCCCAGGCAGCAAGGGCTAGACAGCTCCATGTTCTTCCAAGGACCCAAAGGGAGCAGGGTCAGACCTGGGGAGATCAGCTTCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR TCA 90 bp | TCAGTTCATGCCCTCACTCAGGCTGGGTCTCCCTCCCACAGGCAGTaGCTTGGCATGGTCTCCTTAGTGGCCTCCAGAGGCTGTGACTCT | + |
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Preference number: 1 (lower is better) Translates to: SVHALTQAGSPSHRQ*LGMVSLVASRGCDS Trigger: AGAGTCACAGCCTCTGGAGGCCACTAAGGAGACCATGCCAAGTCACTGCCTGTGGGAGGGAGACCCAGCCTGAGTGAGGGCATGAACTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR GCA 90 bp | CTAAGAGCCTTCTGTTTGGGGCAGAGGAGCCCTGGGAACTGCCATTaGCAGCACACACGCCACACCACACACCGGACAGATGGATGGACT | + |
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Preference number: 1 (lower is better) Translates to: LRAFCLGQRSPGNCH*QHTRHTTHRTDGWT Trigger: AGTCCATCCATCTGTCCGGTGTGTGGTGTGGCGTGTGTGCTGGCAATGGCAGTTCCCAGGGCTCCTCTGCCCCAAACAGAAGGCTCTTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR CCA 90 bp | TCCTCTCCTGCCACTGACCAGCTAGGGGGCCTAAGGCCTAAACTGTaGGAACCTAGGTTTGGGGAGCAGAGGGCACAGCTATGGGACAGT | + |
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Preference number: 1 (lower is better) Translates to: SSPATDQLGGLRPKL*EPRFGEQRAQLWDS Trigger: ACTGTCCCATAGCTGTGCCCTCTGCTCCCCAAACCTAGGTTCCCACAGTTTAGGCCTTAGGCCCCCTAGCTGGTCAGTGGCAGGAGAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR CCA 90 bp | CCTCCAGCTAGGAGGCCACCATTCAGTTCATGCCCTCACTCAGGCTaGGTCTCCCTCCCACAGGCAGTGACTTGGCATGGTCTCCTTAGT | + |
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Preference number: 1 (lower is better) Translates to: PPARRPPFSSCPHSG*VSLPQAVTWHGLLS Trigger: ACTAAGGAGACCATGCCAAGTCACTGCCTGTGGGAGGGAGACCCAGCCTGAGTGAGGGCATGAACTGAATGGTGGCCTCCTAGCTGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR TCA 90 bp | AACTCAGGAGGCACCAAGTCCTGGAGGCACAAAAGGGAGACAAGATaGAGGCAGACAGGTGGTGTAGCCACAGCCCCCTCGACTCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: NSGGTKSWRHKRETR*RQTGGVATAPSTPQ Trigger: CTGAGGAGTCGAGGGGGCTGTGGCTACACCACCTGTCTGCCTTCATCTTGTCTCCCTTTTGTGCCTCCAGGACTTGGTGCCTCCTGAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR TCA 90 bp | GGGGAGGAGGGGAGGGCAAGGTTCAGCAGTGTTACAGTACTGTGCTaGGGCTGCGGTATGGCTTTCTACACTCTGGCCAGCAAGGAGTTG | + |
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Preference number: 1 (lower is better) Translates to: GEEGRARFSSVTVLC*GCGMAFYTLASKEL Trigger: CAACTCCTTGCTGGCCAGAGTGTAGAAAGCCATACCGCAGCCTCAGCACAGTACTGTAACACTGCTGAACCTTGCCCTCCCCTCCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR GCA 90 bp | ACAAGACTAAGAGCCTTCTGTTTGGGGCAGAGGAGCCCTGGGAACTaGCATTGCCAGCACACACGCCACACCACACACCGGACAGATGGA | + |
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Preference number: 1 (lower is better) Translates to: TRLRAFCLGQRSPGN*HCQHTRHTTHRTDG Trigger: TCCATCTGTCCGGTGTGTGGTGTGGCGTGTGTGCTGGCAATGGCAGTTCCCAGGGCTCCTCTGCCCCAAACAGAAGGCTCTTAGTCTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR GCA 90 bp | CTCCCTTTGGGTCCTTGGAAGAACATGGAGCTGTCTAGCCCTTGCTaGCTGGGGCCAAGGATACAGGCTCACACTCCACATCCTACTGGG | + |
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Preference number: 1 (lower is better) Translates to: LPLGPWKNMELSSPC*LGPRIQAHTPHPTG Trigger: CCCAGTAGGATGTGGAGTGTGAGCCTGTATCCTTGGCCCCAGGCAGCAAGGGCTAGACAGCTCCATGTTCTTCCAAGGACCCAAAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR CCA 90 bp | GTGTTACAGTACTGTGCTGAGGCTGCGGTATGGCTTTCTACACTCTaGCCAGCAAGGAGTTGGGGTTCCTGGACTAGAGCCCAGCGCCTG | + |
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Preference number: 1 (lower is better) Translates to: VLQYCAEAAVWLSTL*PARSWGSWTRAQRL Trigger: CAGGCGCTGGGCTCTAGTCCAGGAACCCCAACTCCTTGCTGGCCAGAGTGTAGAAAGCCATACCGCAGCCTCAGCACAGTACTGTAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR TCA 90 bp | CAAGTGTCCTCCTGGAGGAGATACCAGAGAGGTGGGCCCATGTTATaGTCTGTCTGTCTGTCCTGGCTGCCTAGGAGGTTGAGTGGGGGA | + |
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Preference number: 1 (lower is better) Translates to: QVSSWRRYQRGGPML*SVCLSWLPRRLSGG Trigger: TCCCCCACTCAACCTCCTAGGCAGCCAGGACAGACAGACAGATCATAACATGGGCCCACCTCTCTGGTATCTCCTCCAGGAGGACACTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR CCA 90 bp | GTGGCCCCTGGCACCCACCACTTCCCAGCTTTGTCTGGGACCCACTaGGCTCTGGAACAAGGAGAGGACTCAGTAGTGACTTTCTATGTT | + |
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Preference number: 1 (lower is better) Translates to: VAPGTHHFPALSGTH*ALEQGEDSVVTFYV Trigger: AACATAGAAAGTCACTACTGAGTCCTCTCCTTGTTCCAGAGCCCAGTGGGTCCCAGACAAAGCTGGGAAGTGGTGGGTGCCAGGGGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR CCA 90 bp | CTGAACCCAGGGCAATGGGGAAAGGGAACAGTCCAGGGGAGGACATaGGAGTCAGCTGTATCTGTACACCGCATGCATGGACACACATGT | + |
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Preference number: 1 (lower is better) Translates to: LNPGQWGKGTVQGRT*ESAVSVHRMHGHTC Trigger: ACATGTGTGTCCATGCATGCGGTGTACAGATACAGCTGACTCCCATGTCCTCCCCTGGACTGTTCCCTTTCCCCATTGCCCTGGGTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR TCA 90 bp | CTGCCTGCCTGCTCTCTAACTCCCAGGAAAAGACCCGAGACTGTCTaGAAGAACCGAAGAAGGCTAAGCTGCAAGCCAGGGTTTCGGCAA | + |
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Preference number: 1 (lower is better) Translates to: LPACSLTPRKRPETV*KNRRRLSCKPGFRQ Trigger: TTGCCGAAACCCTGGCTTGCAGCTTAGCCTTCTTCGGTTCTTTCAGACAGTCTCGGGTCTTTTCCTGGGAGTTAGAGAGCAGGCAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR CCA 90 bp | GCAGAGGGCACAGCTATGGGACAGTTCAAAGAAAACCACGCAGGGTaGGAAATAAATAGGAAAAGACTGGCAGCTCTGGCGGCTCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: AEGTAMGQFKENHAG*EINRKRLAALAALL Trigger: AAGCAGAGCCGCCAGAGCTGCCAGTCTTTTCCTATTTATTTCCCACCCTGCGTGGTTTTCTTTGAACTGTCCCATAGCTGTGCCCTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR TCA 90 bp | CTAGGAACAAGGAGCTCCCACTGGGACCTACTGTCTCAAACATGCTaGGCAATCAACCACTGGGGATCAGGGTGGAAAGTTAGCAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: LGTRSSHWDLLSQTC*AINHWGSGWKVSRK Trigger: TTTCCTGCTAACTTTCCACCCTGATCCCCAGTGGTTGATTGCTCAGCATGTTTGAGACAGTAGGTCCCAGTGGGAGCTCCTTGTTCCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR TCA 90 bp | GCAAAATACCCAGCATTAATAAACCCGTTTCAAGTATTACCAGCATaGGCTAACCCACCCACCTCTAGCCCTGACCTGGAAGAGGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: AKYPALINPFQVLPA*ANPPTSSPDLEEGL Trigger: CAGCCCCTCTTCCAGGTCAGGGCTAGAGGTGGGTGGGTTAGCTCATGCTGGTAATACTTGAAACGGGTTTATTAATGCTGGGTATTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR TCA 90 bp | TCAGTAGTGACTTTCTATGTTATGATCCAAGGACTTCAGCCCACCTaGAGGGCCGAGGAGAACGAGACTATTTTGATTAGAAACTACAGC | + |
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Preference number: 1 (lower is better) Translates to: SVVTFYVMIQGLQPT*RAEENETILIRNYS Trigger: GCTGTAGTTTCTAATCAAAATAGTCTCGTTCTCCTCGGCCCTTCAGGTGGGCTGAAGTCCTTGGATCATAACATAGAAAGTCACTACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR TCA 90 bp | ACGGCTACATCTGCTGTAATAAATGTATTAAACTACCTAACCTTCTaGAAACCCTTGACTTGGCACTACACGGATAGTAACACATTAACT | + |
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Preference number: 1 (lower is better) Translates to: TATSAVINVLNYLTF*KPLTWHYTDSNTLT Trigger: AGTTAATGTGTTACTATCCGTGTAGTGCCAAGTCAAGGGTTTTCAGAAGGTTAGGTAGTTTAATACATTTATTACAGCAGATGTAGCCGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR GCA 90 bp | GGCCCGACTGAGGGCCCCTCAGAGCAGGTGGGCCACTCTTCCCCGCCTCACCCCAGGAGCCCTGGGAACTaGCATTGCCAGCACACACGC | + |
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Preference number: 2 (lower is better) Translates to: GPTEGPSEQVGHSSPPHPRSPGN*HCQHTR Trigger: GCGTGTGTGCTGGCAATGGCAGTTCCCAGGGCTCCT...GGGGTGAGGCGGGGAAGAGTGGCCCACCTGCTCTGAGGGGCCCTCAGTCGGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR TCA 90 bp | GGCCCGACTGAGGGCCCCTCAGAGCAGGTGGGCCACTCTTCCCCGCCTCACCCCACCTCAGGCTGCTTCTaGACCCAGGGCAATGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: GPTEGPSEQVGHSSPPHPTSGCF*TQGNGE Trigger: TTCCCCATTGCCCTGGGTTCAGAAGCAGCCTGAGGT...GGGGTGAGGCGGGGAAGAGTGGCCCACCTGCTCTGAGGGGCCCTCAGTCGGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR CCA 90 bp | CCTCAGCCTGTCGGGGCAGGTCACAGCTGGGAGCCTAACCTGGGGGCTGGGTGGTTCTGCGGGCCTGGATaGCTTGTTTGGCTTCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: PQPVGAGHSWEPNLGAGWFCGPG*LVWLPL Trigger: CAGGGGAAGCCAAACAAGCCATCCAGGCCCGCAGAA...CCACCCAGCCCCCAGGTTAGGCTCCCAGCTGTGACCTGCCCCGACAGGCTGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR CCA 90 bp | AGGAGCCCTGGGAACTGCCATTGCCAGCACACACGCCACACCACACACCGGACAGGGGCAGGTCACAGCTaGGAGCCTAACCTGGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: RSPGNCHCQHTRHTTHRTGAGHS*EPNLGA Trigger: AGCCCCCAGGTTAGGCTCCCAGCTGTGACCTGCCCC...TGTCCGGTGTGTGGTGTGGCGTGTGTGCTGGCAATGGCAGTTCCCAGGGCTCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR CCA 90 bp | AGGAGCCCTGGGAACTGCCATTGCCAGCACACACGCCACACCACACACCGGACATTCCCTCAGATGGCATaGGGAGGGTCCCCGCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: RSPGNCHCQHTRHTTHRTFPQMA*GGSPQV Trigger: CACCTGCGGGGACCCTCCCCATGCCATCTGAGGGAA...TGTCCGGTGTGTGGTGTGGCGTGTGTGCTGGCAATGGCAGTTCCCAGGGCTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR CCA 90 bp | TGGACAACCCACACGGGCCTCCGGGTCCACTCTGCCCCTGCCTCCGGTCCTGATCCTGGATGGCTTGTTTaGCTTCCCCTGACACAGGCT | + |
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Preference number: 2 (lower is better) Translates to: WTTHTGLRVHSAPASGPDPGWLV*LPLTQA Trigger: AGCCTGTGTCAGGGGAAGCCAAACAAGCCATCCAGG...ATCAGGACCGGAGGCAGGGGCAGAGTGGACCCGGAGGCCCGTGTGGGTTGTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR CCA 90 bp | CTGCTAGGCTGGCCTATGGCTCTGCTGACTGGTGGCAGGCTGCGAGGCGAGATTGAAGCCATCTCCCAGTaGCCCCTGGCACCCACCACT | + |
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Preference number: 2 (lower is better) Translates to: LLGWPMALLTGGRLRGEIEAISQ*PLAPTT Trigger: AGTGGTGGGTGCCAGGGGCCACTGGGAGATGGCTTC...AATCTCGCCTCGCAGCCTGCCACCAGTCAGCAGAGCCATAGGCCAGCCTAGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR CCA 90 bp | GAGCTCCTTAAGCCCCCGCACAGACTGGATGATCGCGGCAGGATGGCAAAGGAGTGCCCTCACTCAGGCTaGGTCTCCCTCCCACAGGCA | + |
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Preference number: 2 (lower is better) Translates to: ELLKPPHRLDDRGRMAKECPHSG*VSLPQA Trigger: TGCCTGTGGGAGGGAGACCCAGCCTGAGTGAGGGCA...CTCCTTTGCCATCCTGCCGCGATCATCCAGTCTGTGCGGGGGCTTAAGGAGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR CAA 90 bp | AATGTAGGAGCCCCAAACCACAGCAGTCCCAGAGAGGGTCCCCACTaGTCGCCTGTGGTTCAGAGCCAGCTACTCAGCAGGCCCTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: NVGAPNHSSPREGPH*SPVVQSQLLSRPWL Trigger: GAGCCAGGGCCTGCTGAGTAGCTGGCTCTGAACCACAGGCGACAAGTGGGGACCCTCTCTGGGACTGCTGTGGTTTGGGGCTCCTACATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR TCA 90 bp | GAGCTCCTTAAGCCCCCGCACAGACTGGATGATCGCGGCAGGATGGCAAAGGAGGGACTCTACAGGAGCTaGGGTTCTGCGGGCCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: ELLKPPHRLDDRGRMAKEGLYRS*GSAGLD Trigger: ATCCAGGCCCGCAGAACCTCAGCTCCTGTAGAGTCC...CTCCTTTGCCATCCTGCCGCGATCATCCAGTCTGTGCGGGGGCTTAAGGAGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR TCA 90 bp | GTTCTAAGGAAGCCTAGGCCAAGGGGGAGGTGGGACAAGACTAAGAGCCTTCTGGGTGGCCTGGGGCTCTaGAGCCATCTCCCAGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: VLRKPRPRGRWDKTKSLLGGLGL*SHLPVA Trigger: GGCCACTGGGAGATGGCTTCAGAGCCCCAGGCCACC...CAGAAGGCTCTTAGTCTTGTCCCACCTCCCCCTTGGCCTAGGCTTCCTTAGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR GCA 90 bp | AGGAGCCCTGGGAACTGCCATTGCCAGCACACACGCCACACCACACACCGGACACCATCCCTACTGTGCTaGCCAGGACTCTACAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: RSPGNCHCQHTRHTTHRTPSLLC*PGLYRS Trigger: GCTCCTGTAGAGTCCTGGGCAGCACAGTAGGGATGG...TGTCCGGTGTGTGGTGTGGCGTGTGTGCTGGCAATGGCAGTTCCCAGGGCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR GCA 90 bp | CTGCTAGGCTGGCCTATGGCTCTGCTGACTGGTGGCAGGCTGCGAGGCGAGATTCCACCATTCAGTTCATaGCCTCACTCAGGCTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: LLGWPMALLTGGRLRGEIPPFSS*PHSGWV Trigger: GACCCAGCCTGAGTGAGGGCATGAACTGAATGGTGG...AATCTCGCCTCGCAGCCTGCCACCAGTCAGCAGAGCCATAGGCCAGCCTAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR GCA 90 bp | AGCTCCTTAAGCCCCCGCACAGACTGGATGATCGCGGCAGGATGGCAAAGGAGGGCTGCTTCCCACCCCTaGTTGCTCTCTCTACTGGAC | + |
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Preference number: 2 (lower is better) Translates to: SSLSPRTDWMIAAGWQRRAASHP*LLSLLD Trigger: GTCCAGTAGAGAGAGCAAGCAGGGGTGGGAAGCAGC...CCTCCTTTGCCATCCTGCCGCGATCATCCAGTCTGTGCGGGGGCTTAAGGAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGCCCTGGGAACTGCCATTGCCAGCACACACGCCACACCACACACCGGACACCACAGGCAGTGACTTaGCATGGTCTCCTTAGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: RSPGNCHCQHTRHTTHRTPQAVT*HGLLSG Trigger: GCCACTAAGGAGACCATGCCAAGTCACTGCCTGTGG...TGTCCGGTGTGTGGTGTGGCGTGTGTGCTGGCAATGGCAGTTCCCAGGGCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR-3UTR CCA 90 bp | AGCTCCTTAAGCCCCCGCACAGACTGGATGATCGCGGCAGGATGGCAAAGGAGGCTTCCCAGCTTTGTCTaGGACCCACTGGGCTCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: SSLSPRTDWMIAAGWQRRLPSFV*DPLGSG Trigger: TCCAGAGCCCAGTGGGTCCCAGACAAAGCTGGGAAG...CCTCCTTTGCCATCCTGCCGCGATCATCCAGTCTGTGCGGGGGCTTAAGGAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR CAA 90 bp | ACTAAGAGCCTTCTGTTTGGGGCAGAGGAGCCCTGGGAACTGCCATaGCCAGCACACACGCCACACCACACACCGGACAGATGGATGGAC | + |
|
Preference number: 2 (lower is better) Translates to: TKSLLFGAEEPWELP*PAHTPHHTPDRWMD Trigger: GTCCATCCATCTGTCCGGTGTGTGGTGTGGCGTGTGTGCTGGCAATGGCAGTTCCCAGGGCTCCTCTGCCCCAAACAGAAGGCTCTTAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR-3UTR TCA 90 bp | GTTGAGTGGGGGACTAGGAACAAGGAGCTCCCACTGGGACCTACTGTCTCAAACCTCCTCTCCTGCCACTaGCCAGCTAGGGGGCCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: VEWGTRNKELPLGPTVSNLLSCH*PARGPK Trigger: CTTAGGCCCCCTAGCTGGTCAGTGGCAGGAGAGGAG...GTTTGAGACAGTAGGTCCCAGTGGGAGCTCCTTGTTCCTAGTCCCCCACTCAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR-3UTR CCA 90 bp | AGGCTGTGCAGGAGATGGCAAAGTCCTGACAAGTGTCCTCCTGGAGGAGATACCTCTGCTTCCCTCAGATaGCATGGGGAGGGTCCCCGC | + |
|
Preference number: 2 (lower is better) Translates to: RLCRRWQSPDKCPPGGDTSASLR*HGEGPR Trigger: GCGGGGACCCTCCCCATGCCATCTGAGGGAAGCAGA...GGTATCTCCTCCAGGAGGACACTTGTCAGGACTTTGCCATCTCCTGCACAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR CCA 90 bp | GAGCTCCTTAAGCCCCCGCACAGACTGGATGATCGCGGCAGGATGGCAAAGGAGCTGAACCCAGGGCAATaGGGAAAGGGAACAGTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: ELLKPPHRLDDRGRMAKELNPGQ*GKGTVQ Trigger: CTGGACTGTTCCCTTTCCCCATTGCCCTGGGTTCAG...CTCCTTTGCCATCCTGCCGCGATCATCCAGTCTGTGCGGGGGCTTAAGGAGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR-3UTR CCA 90 bp | GTGGGAACAGCGTCAAGCCCGTTGTGCTTAGAGCAGTTGCCAAACTTGTTCAGCCACAGGTTAGGCAGGTaGAGGTGCCGGGTGCCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: VGTASSPLCLEQLPNLFSHRLGR*RCRVPG Trigger: GCCAGGCACCCGGCACCTCCACCTGCCTAACCTGTG...GCTGAACAAGTTTGGCAACTGCTCTAAGCACAACGGGCTTGACGCTGTTCCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR CCA 90 bp | AAGGTTCAGCAGTGTTACAGTACTGTGCTGAGGCTGCGGTATGGCTTTCTACACCTGGGGGCTGGGTGGTaGCGTCTAAAGGGCCGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: KVQQCYSTVLRLRYGFLHLGAGW*RLKGRS Trigger: GCTCCGGCCCTTTAGACGCCACCACCCAGCCCCCAG...GTGTAGAAAGCCATACCGCAGCCTCAGCACAGTACTGTAACACTGCTGAACCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR CCA 90 bp | AGGAGCCCTGGGAACTGCCATTGCCAGCACACACGCCACACCACACACCGGACAACAAGGAGCTCCCACTaGGACCTACTGTCTCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: RSPGNCHCQHTRHTTHRTTRSSH*DLLSQT Trigger: TGTTTGAGACAGTAGGTCCCAGTGGGAGCTCCTTGT...TGTCCGGTGTGTGGTGTGGCGTGTGTGCTGGCAATGGCAGTTCCCAGGGCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR-3UTR GCA 90 bp | GTTCTAAGGAAGCCTAGGCCAAGGGGGAGGTGGGACAAGACTAAGAGCCTTCTGCTTCCCACCCCTGCTTaGTCTCTCTACTGGACCCCA | + |
|
Preference number: 2 (lower is better) Translates to: VLRKPRPRGRWDKTKSLLLPTPA*SLYWTP Trigger: TGGGGTCCAGTAGAGAGAGCAAGCAGGGGTGGGAAG...CAGAAGGCTCTTAGTCTTGTCCCACCTCCCCCTTGGCCTAGGCTTCCTTAGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR CCA 90 bp | GTTGAGTGGGGGACTAGGAACAAGGAGCTCCCACTGGGACCTACTGTCTCAAACGGACCCACTGGGCTCTaGAACAAGGAGAGGACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: VEWGTRNKELPLGPTVSNGPTGL*NKERTQ Trigger: CTGAGTCCTCTCCTTGTTCCAGAGCCCAGTGGGTCC...GTTTGAGACAGTAGGTCCCAGTGGGAGCTCCTTGTTCCTAGTCCCCCACTCAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR-3UTR CCA 90 bp | CAGTGTTACAGTACTGTGCTGAGGCTGCGGTATGGCTTTCTACACTCTGGCCAGCCCTGTAGGCACAGATaGTGGCAGATGGGCCACAGG | + |
|
Preference number: 2 (lower is better) Translates to: QCYSTVLRLRYGFLHSGQPCRHR*WQMGHR Trigger: CCTGTGGCCCATCTGCCACCATCTGTGCCTACAGGG...CTGGCCAGAGTGTAGAAAGCCATACCGCAGCCTCAGCACAGTACTGTAACACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR CAA 90 bp | GATGGGGGCGTGGGAACAGCGTCAAGCCCGTTGTGCTTAGAGCAGTaGCCAAACTTGTTCAGCAGCGTCATCAACACCCAGATAGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: DGGVGTASSPLCLEQ*PNLFSSVINTQIAP Trigger: AGGAGCTATCTGGGTGTTGATGACGCTGCTGAACAAGTTTGGCAACTGCTCTAAGCACAACGGGCTTGACGCTGTTCCCACGCCCCCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR-3UTR GCA 90 bp | CAGTGTTACAGTACTGTGCTGAGGCTGCGGTATGGCTTTCTACACTCTGGCCAGCAGGAGCTGAGGTTCTaGGGGCCTGGATGGCTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: QCYSTVLRLRYGFLHSGQQELRF*GPGWLV Trigger: AACAAGCCATCCAGGCCCGCAGAACCTCAGCTCCTG...CTGGCCAGAGTGTAGAAAGCCATACCGCAGCCTCAGCACAGTACTGTAACACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR CCA 90 bp | GTTGAGTGGGGGACTAGGAACAAGGAGCTCCCACTGGGACCTACTGTCTCAAACGGAGGCACCAAGTCCTaGAGGCACAAAAGGGAGACA | + |
|
Preference number: 2 (lower is better) Translates to: VEWGTRNKELPLGPTVSNGGTKS*RHKRET Trigger: TGTCTCCCTTTTGTGCCTCCAGGACTTGGTGCCTCC...GTTTGAGACAGTAGGTCCCAGTGGGAGCTCCTTGTTCCTAGTCCCCCACTCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR CAA 90 bp | GTGGGAACAGCGTCAAGCCCGTTGTGCTTAGAGCAGTTGCCAAACTaGTTCAGCAGCGTCATCAACACCCAGATAGCTCCTGAAGGAACC | + |
|
Preference number: 2 (lower is better) Translates to: VGTASSPLCLEQLPN*FSSVINTQIAPEGT Trigger: GGTTCCTTCAGGAGCTATCTGGGTGTTGATGACGCTGCTGAACAAGTTTGGCAACTGCTCTAAGCACAACGGGCTTGACGCTGTTCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR-3UTR CCA 90 bp | GTGGGAACAGCGTCAAGCCCGTTGTGCTTAGAGCAGTTGCCAAACTTGTTCAGCTCTGTCTGTCTGTCCTaGCTGCCTAGGAGGTTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: VGTASSPLCLEQLPNLFSSVCLS*LPRRLS Trigger: ACTCAACCTCCTAGGCAGCCAGGACAGACAGACAGA...GCTGAACAAGTTTGGCAACTGCTCTAAGCACAACGGGCTTGACGCTGTTCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR TCA 90 bp | AAGGTTCAGCAGTGTTACAGTACTGTGCTGAGGCTGCGGTATGGCTTTCTACACGGTGGGCCCATGTTATaGTCTGTCTGTCTGTCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: KVQQCYSTVLRLRYGFLHGGPML*SVCLSW Trigger: CCAGGACAGACAGACAGATCATAACATGGGCCCACC...GTGTAGAAAGCCATACCGCAGCCTCAGCACAGTACTGTAACACTGCTGAACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR CCA 90 bp | GAGCTCCTTAAGCCCCCGCACAGACTGGATGATCGCGGCAGGATGGCAAAGGAGGAAAACCACGCAGGGTaGGAAATAAATAGGAAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: ELLKPPHRLDDRGRMAKEENHAG*EINRKR Trigger: TCTTTTCCTATTTATTTCCCACCCTGCGTGGTTTTC...CTCCTTTGCCATCCTGCCGCGATCATCCAGTCTGTGCGGGGGCTTAAGGAGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR CCA 90 bp | GTTCTAAGGAAGCCTAGGCCAAGGGGGAGGTGGGACAAGACTAAGAGCCTTCTGCAGAGGGCACAGCTATaGGACAGTTCAAAGAAAACC | + |
|
Preference number: 2 (lower is better) Translates to: VLRKPRPRGRWDKTKSLLQRAQL*DSSKKT Trigger: GGTTTTCTTTGAACTGTCCCATAGCTGTGCCCTCTG...CAGAAGGCTCTTAGTCTTGTCCCACCTCCCCCTTGGCCTAGGCTTCCTTAGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR TCA 90 bp | CAGTGTTACAGTACTGTGCTGAGGCTGCGGTATGGCTTTCTACACTCTGGCCAGCCTTCTGAAAACCCTTaGCTTGGCACTACACGGATA | + |
|
Preference number: 2 (lower is better) Translates to: QCYSTVLRLRYGFLHSGQPSENP*LGTTRI Trigger: TATCCGTGTAGTGCCAAGTCAAGGGTTTTCAGAAGG...CTGGCCAGAGTGTAGAAAGCCATACCGCAGCCTCAGCACAGTACTGTAACACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR CCA 90 bp | GTGGGAACAGCGTCAAGCCCGTTGTGCTTAGAGCAGTTGCCAAACTTGTTCAGCGAGATACCAGAGAGGTaGGCCCATGTTATGATCTGT | + |
|
Preference number: 2 (lower is better) Translates to: VGTASSPLCLEQLPNLFSEIPER*AHVMIC Trigger: ACAGATCATAACATGGGCCCACCTCTCTGGTATCTC...GCTGAACAAGTTTGGCAACTGCTCTAAGCACAACGGGCTTGACGCTGTTCCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR GCA 90 bp | GCTGAGCAATCAACCACTGGGGATCAGGGTGGAAAGTTAGCAGGAAAGAACTCATATCTGTACACCGCATaGATGGACACACATGTGCGC | + |
|
Preference number: 2 (lower is better) Translates to: AEQSTTGDQGGKLAGKNSYLYTA*MDTHVR Trigger: GCGCACATGTGTGTCCATGCATGCGGTGTACAGATA...TGAGTTCTTTCCTGCTAACTTTCCACCCTGATCCCCAGTGGTTGATTGCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR TCA 90 bp | AAGGTTCAGCAGTGTTACAGTACTGTGCTGAGGCTGCGGTATGGCTTTCTACACAAAAGGGAGACAAGATaGAGGCAGACAGGTGGTGTA | + |
|
Preference number: 2 (lower is better) Translates to: KVQQCYSTVLRLRYGFLHKRETR*RQTGGV Trigger: TACACCACCTGTCTGCCTTCATCTTGTCTCCCTTTT...GTGTAGAAAGCCATACCGCAGCCTCAGCACAGTACTGTAACACTGCTGAACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR CCA 90 bp | GCTGAGCAATCAACCACTGGGGATCAGGGTGGAAAGTTAGCAGGAAAGAACTCAAGTGGTTATCACAGATaGAATGTAGGAGCCCCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: AEQSTTGDQGGKLAGKNSSGYHR*NVGAPN Trigger: GTTTGGGGCTCCTACATTCCATCTGTGATAACCACT...TGAGTTCTTTCCTGCTAACTTTCCACCCTGATCCCCAGTGGTTGATTGCTCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR CCA 90 bp | AAGAACCGAAGAAGGCTAAGCTGCAAGCCAGGGTTTCGGCAAAATAAAAGCAAACTAAGGCCTAAACTGTaGGAACCTAGGTTTGGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: KNRRRLSCKPGFRQNKSKLRPKL*EPRFGE Trigger: CTCCCCAAACCTAGGTTCCCACAGTTTAGGCCTTAG...TTTGCTTTTATTTTGCCGAAACCCTGGCTTGCAGCTTAGCCTTCTTCGGTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR GCA 90 bp | AAGGTTCAGCAGTGTTACAGTACTGTGCTGAGGCTGCGGTATGGCTTTCTACACCCTCACGGCTACATCTaGTGTAATAAATGTATTAAA | + |
|
Preference number: 2 (lower is better) Translates to: KVQQCYSTVLRLRYGFLHPHGYI*CNKCIK Trigger: TTTAATACATTTATTACAGCAGATGTAGCCGTGAGG...GTGTAGAAAGCCATACCGCAGCCTCAGCACAGTACTGTAACACTGCTGAACCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR CCA 72 bp | TGGCAGCTCTGGCGGCTCTGCTTCCCTCAGATGGCATaGGGAGGGTCCCCGCAGGTGTGGAGGACGGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: WQLWRLCFPQMA*GGSPQVWRTAG Trigger: ACCTGCCGTCCTCCACACCTGCGGGGACCCTCCCCATGCCATCTGAGGGAAGCAGAGCCGCCAGAGCTGCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR CCA 72 bp | GGTCACAGCTGGGAGCCTAACCTGGGGGCTGGGTGGTaGCGTCTAAAGGGCCGGAGCGGGTGGTCTCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GHSWEPNLGAGW*RLKGRSGWSLS Trigger: GGAGAGAGACCACCCGCTCCGGCCCTTTAGACGCCACCACCCAGCCCCCAGGTTAGGCTCCCAGCTGTGACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR TCA 72 bp | GCCCTCACTCAGGCTGGGTCTCCCTCCCACAGGCAGTaGCTTGGCATGGTCTCCTTAGTGGCCTCCAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: ALTQAGSPSHRQ*LGMVSLVASRG Trigger: GCCTCTGGAGGCCACTAAGGAGACCATGCCAAGTCACTGCCTGTGGGAGGGAGACCCAGCCTGAGTGAGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR-3UTR CAA 90 bp | GAACCCAGGGCAATGGGGAAAGGGAACAGTCCAGGGGAGGACATGGGAGTCAGCGCTTCCCACCCCTGCTaGCTCTCTCTACTGGACCCC | + |
|
Preference number: 3 (lower is better) Translates to: EPRAMGKGNSPGEDMGVSASHPC*LSLLDP Trigger: GGGGTCCAGTAGAGAGAGCAAGCAGGGGTGGGAAGC...GCTGACTCCCATGTCCTCCCCTGGACTGTTCCCTTTCCCCATTGCCCTGGGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR GCA 72 bp | AGAGCCTTCTGTTTGGGGCAGAGGAGCCCTGGGAACTaGCATTGCCAGCACACACGCCACACCACACACCGG | + |
|
Preference number: 3 (lower is better) Translates to: RAFCLGQRSPGN*HCQHTRHTTHR Trigger: CCGGTGTGTGGTGTGGCGTGTGTGCTGGCAATGGCAGTTCCCAGGGCTCCTCTGCCCCAAACAGAAGGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR CCA 72 bp | ACAGCAGTCCCAGAGAGGGTCCCCACTTGTCGCCTGTaGTTCAGAGCCAGCTACTCAGCAGGCCCTGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TAVPERVPTCRL*FRASYSAGPGS Trigger: TGAGCCAGGGCCTGCTGAGTAGCTGGCTCTGAACCACAGGCGACAAGTGGGGACCCTCTCTGGGACTGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR GCA 72 bp | GTTCCCACCAATCACTGGGCTGCCCGCCTGCCTGCCTaGTCTCTAACTCCCAGGAAAAGACCCGAGACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: VPTNHWAARLPA*SLTPRKRPETV Trigger: GACAGTCTCGGGTCTTTTCCTGGGAGTTAGAGAGCAGGCAGGCAGGCGGGCAGCCCAGTGATTGGTGGGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR GCA 72 bp | CAGAGTTCCCACCAATCACTGGGCTGCCCGCCTGCCTaGCTGCTCTCTAACTCCCAGGAAAAGACCCGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: QSSHQSLGCPPA*LLSNSQEKTRD Trigger: GTCTCGGGTCTTTTCCTGGGAGTTAGAGAGCAGGCAGGCAGGCGGGCAGCCCAGTGATTGGTGGGAACTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR CCA 72 bp | GCGGTCCTCAGGAGCTCCTTAAGCCCCCGCACAGACTaGATGATCGCGGCAGGATGGCAAAGGAGGAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: AVLRSSLSPRTD*MIAAGWQRRRR Trigger: TCTTCTCCTCCTTTGCCATCCTGCCGCGATCATCCAGTCTGTGCGGGGGCTTAAGGAGCTCCTGAGGACCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| 3UTR CCA 72 bp | GCGGTATGGCTTTCTACACTCTGGCCAGCAAGGAGTTaGGGTTCCTGGACTAGAGCCCAGCGCCTGCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: AVWLSTLWPARS*GSWTRAQRLPT Trigger: AGTGGGCAGGCGCTGGGCTCTAGTCCAGGAACCCCAACTCCTTGCTGGCCAGAGTGTAGAAAGCCATACCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTCCTTAAGCCCCCGCACAGACTGGATGATCGCGGCAGGATGGCAAAGGAGATGGACTCCATGGGGTaGGTGAGGCATGCGATGACG | + |
|
Preference number: 3 (lower is better) Translates to: ELLKPPHRLDDRGRMAKEMDSMG*VRHAMT Trigger: CGTCATCGCATGCCTCACCAACCCCATGGAGTCCAT...CTCCTTTGCCATCCTGCCGCGATCATCCAGTCTGTGCGGGGGCTTAAGGAGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR TCA 72 bp | GGCACCAAGTCCTGGAGGCACAAAAGGGAGACAAGATaGAGGCAGACAGGTGGTGTAGCCACAGCCCCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: GTKSWRHKRETR*RQTGGVATAPS Trigger: CGAGGGGGCTGTGGCTACACCACCTGTCTGCCTTCATCTTGTCTCCCTTTTGTGCCTCCAGGACTTGGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR GCA 72 bp | TTCTGTTTGGGGCAGAGGAGCCCTGGGAACTGCCATTaGCAGCACACACGCCACACCACACACCGGACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: FCLGQRSPGNCH*QHTRHTTHRTD Trigger: ATCTGTCCGGTGTGTGGTGTGGCGTGTGTGCTGGCAATGGCAGTTCCCAGGGCTCCTCTGCCCCAAACAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR GCA 72 bp | GGGGATGGGGGCGTGGGAACAGCGTCAAGCCCGTTGTaGTTAGAGCAGTTGCCAAACTTGTTCAGCAGCGTC | + |
|
Preference number: 3 (lower is better) Translates to: GDGGVGTASSPL*LEQLPNLFSSV Trigger: GACGCTGCTGAACAAGTTTGGCAACTGCTCTAAGCACAACGGGCTTGACGCTGTTCCCACGCCCCCATCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR CCA 72 bp | GCCACTGACCAGCTAGGGGGCCTAAGGCCTAAACTGTaGGAACCTAGGTTTGGGGAGCAGAGGGCACAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: ATDQLGGLRPKL*EPRFGEQRAQL Trigger: TAGCTGTGCCCTCTGCTCCCCAAACCTAGGTTCCCACAGTTTAGGCCTTAGGCCCCCTAGCTGGTCAGTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR CCA 72 bp | AGGAGGCCACCATTCAGTTCATGCCCTCACTCAGGCTaGGTCTCCCTCCCACAGGCAGTGACTTGGCATGGT | + |
|
Preference number: 3 (lower is better) Translates to: RRPPFSSCPHSG*VSLPQAVTWHG Trigger: ACCATGCCAAGTCACTGCCTGTGGGAGGGAGACCCAGCCTGAGTGAGGGCATGAACTGAATGGTGGCCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR CCA 72 bp | TTGCCAGCACACACGCCACACCACACACCGGACAGATaGATGGACTCCATGGGGTTGGTGAGGCATGCGATG | + |
|
Preference number: 3 (lower is better) Translates to: LPAHTPHHTPDR*MDSMGLVRHAM Trigger: CATCGCATGCCTCACCAACCCCATGGAGTCCATCCATCTGTCCGGTGTGTGGTGTGGCGTGTGTGCTGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR TCA 72 bp | AAAGGGCCAAAGCTCAGGCAGCAGACAACAGGCAGGTaGGAGCGTGGCAGGGATGCGAAGCGGGATGTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: KGPKLRQQTTGR*ERGRDAKRDVS Trigger: ACTAACATCCCGCTTCGCATCCCTGCCACGCTCTCACCTGCCTGTTGTCTGCTGCCTGAGCTTTGGCCCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR GCA 72 bp | TACAAAAGGGAGTGGGCAGCAGGTGAGCAGACGCTATaGTGGACGAAGCTGATCTCCCCAGGTCTGACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: YKREWAAGEQTL*WTKLISPGLTL Trigger: CAGGGTCAGACCTGGGGAGATCAGCTTCGTCCAGCATAGCGTCTGCTCACCTGCTGCCCACTCCCTTTTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR CCA 72 bp | AAGACTAAGAGCCTTCTGTTTGGGGCAGAGGAGCCCTaGGAACTGCCATTGCCAGCACACACGCCACACCAC | + |
|
Preference number: 3 (lower is better) Translates to: KTKSLLFGAEEP*ELPLPAHTPHH Trigger: GTGGTGTGGCGTGTGTGCTGGCAATGGCAGTTCCCAGGGCTCCTCTGCCCCAAACAGAAGGCTCTTAGTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR CCA 72 bp | ATCTCCCCAGGTCTGACCCTGCTCCCTTTGGGTCCTTaGAAGAACATGGAGCTGTCTAGCCCTTGCTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: ISPGLTLLPLGP*KNMELSSPCCL Trigger: CAGGCAGCAAGGGCTAGACAGCTCCATGTTCTTCCAAGGACCCAAAGGGAGCAGGGTCAGACCTGGGGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGTGTTACAGTACTGTGCTGAGGCTGCGGTATGGCTTTCTACACTCTGGCCAGGCCTGGATGGCTTGTTaGGCTTCCCCTGACACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QCYSTVLRLRYGFLHSGQAWMAC*ASPDTG Trigger: GCCTGTGTCAGGGGAAGCCAAACAAGCCATCCAGGC...CTGGCCAGAGTGTAGAAAGCCATACCGCAGCCTCAGCACAGTACTGTAACACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR TCA 72 bp | GGGAGGGCAAGGTTCAGCAGTGTTACAGTACTGTGCTaGGGCTGCGGTATGGCTTTCTACACTCTGGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GRARFSSVTVLC*GCGMAFYTLAS Trigger: GCTGGCCAGAGTGTAGAAAGCCATACCGCAGCCTCAGCACAGTACTGTAACACTGCTGAACCTTGCCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR GCA 72 bp | GGTCCTTGGAAGAACATGGAGCTGTCTAGCCCTTGCTaGCTGGGGCCAAGGATACAGGCTCACACTCCACAT | + |
|
Preference number: 3 (lower is better) Translates to: GPWKNMELSSPC*LGPRIQAHTPH Trigger: ATGTGGAGTGTGAGCCTGTATCCTTGGCCCCAGGCAGCAAGGGCTAGACAGCTCCATGTTCTTCCAAGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR CCA 72 bp | GGGCAATGGGGAAAGGGAACAGTCCAGGGGAGGACATaGGAGTCAGCTGTATCTGTACACCGCATGCATGGA | + |
|
Preference number: 3 (lower is better) Translates to: GQWGKGTVQGRT*ESAVSVHRMHG Trigger: TCCATGCATGCGGTGTACAGATACAGCTGACTCCCATGTCCTCCCCTGGACTGTTCCCTTTCCCCATTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR CCA 72 bp | TACTGTGCTGAGGCTGCGGTATGGCTTTCTACACTCTaGCCAGCAAGGAGTTGGGGTTCCTGGACTAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: YCAEAAVWLSTL*PARSWGSWTRA Trigger: GGCTCTAGTCCAGGAACCCCAACTCCTTGCTGGCCAGAGTGTAGAAAGCCATACCGCAGCCTCAGCACAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR TCA 72 bp | TCCTGGAGGAGATACCAGAGAGGTGGGCCCATGTTATaGTCTGTCTGTCTGTCCTGGCTGCCTAGGAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: SWRRYQRGGPML*SVCLSWLPRRL Trigger: CAACCTCCTAGGCAGCCAGGACAGACAGACAGATCATAACATGGGCCCACCTCTCTGGTATCTCCTCCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR TCA 72 bp | CTTGTTCAGCAGCGTCATCAACACCCAGATAGCTCCTaGAGGAACCTGCTAGGCTGGCCTATGGCTCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LVQQRHQHPDSS*RNLLGWPMALL Trigger: CAGCAGAGCCATAGGCCAGCCTAGCAGGTTCCTTCAGGAGCTATCTGGGTGTTGATGACGCTGCTGAACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR-3UTR CAA 90 bp | AAGGTTCAGCAGTGTTACAGTACTGTGCTGAGGCTGCGGTATGGCTTTCTACACTGTGGGAACCTAGGTTaGGGGAGCAGAGGGCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: KVQQCYSTVLRLRYGFLHCGNLG*GSRGHS Trigger: GCTGTGCCCTCTGCTCCCCAAACCTAGGTTCCCACA...GTGTAGAAAGCCATACCGCAGCCTCAGCACAGTACTGTAACACTGCTGAACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR-3UTR CAA 90 bp | AAGGTTCAGCAGTGTTACAGTACTGTGCTGAGGCTGCGGTATGGCTTTCTACACCTAAGAGCCTTCTGTTaGGGGCAGAGGAGCCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: KVQQCYSTVLRLRYGFLHLRAFC*GQRSPG Trigger: CCCAGGGCTCCTCTGCCCCAAACAGAAGGCTCTTAG...GTGTAGAAAGCCATACCGCAGCCTCAGCACAGTACTGTAACACTGCTGAACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR CCA 72 bp | TGGGAACCTAGGTTTGGGGAGCAGAGGGCACAGCTATaGGACAGTTCAAAGAAAACCACGCAGGGTGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: WEPRFGEQRAQL*DSSKKTTQGGK Trigger: TTTCCCACCCTGCGTGGTTTTCTTTGAACTGTCCCATAGCTGTGCCCTCTGCTCCCCAAACCTAGGTTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR CCA 72 bp | CTGACAAGTGTCCTCCTGGAGGAGATACCAGAGAGGTaGGCCCATGTTATGATCTGTCTGTCTGTCCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LTSVLLEEIPER*AHVMICLSVLA Trigger: AGCCAGGACAGACAGACAGATCATAACATGGGCCCACCTCTCTGGTATCTCCTCCAGGAGGACACTTGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR TCA 72 bp | AGGAGCTCCCACTGGGACCTACTGTCTCAAACATGCTaGGCAATCAACCACTGGGGATCAGGGTGGAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: RSSHWDLLSQTC*AINHWGSGWKV Trigger: AACTTTCCACCCTGATCCCCAGTGGTTGATTGCTCAGCATGTTTGAGACAGTAGGTCCCAGTGGGAGCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR TCA 72 bp | TCTTTATTTCTTTTACAAAAGGGAGTGGGCAGCAGGTaGGCAGACGCTATGCTGGACGAAGCTGATCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: SLFLLQKGVGSR*ADAMLDEADLP Trigger: GGGGAGATCAGCTTCGTCCAGCATAGCGTCTGCTCACCTGCTGCCCACTCCCTTTTGTAAAAGAAATAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR TCA 72 bp | CCAGCATTAATAAACCCGTTTCAAGTATTACCAGCATaGGCTAACCCACCCACCTCTAGCCCTGACCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PALINPFQVLPA*ANPPTSSPDLE Trigger: TTCCAGGTCAGGGCTAGAGGTGGGTGGGTTAGCTCATGCTGGTAATACTTGAAACGGGTTTATTAATGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR GCA 72 bp | CATGTGCGCATACACACAACCCCTCACGGCTACATCTaGTGTAATAAATGTATTAAACTACCTAACCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: HVRIHTTPHGYI*CNKCIKLPNLL Trigger: CAGAAGGTTAGGTAGTTTAATACATTTATTACAGCAGATGTAGCCGTGAGGGGTTGTGTGTATGCGCACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR TCA 72 bp | TCTGCTGTAATAAATGTATTAAACTACCTAACCTTCTaGAAACCCTTGACTTGGCACTACACGGATAGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: SAVINVLNYLTF*KPLTWHYTDSN Trigger: GTTACTATCCGTGTAGTGCCAAGTCAAGGGTTTTCAGAAGGTTAGGTAGTTTAATACATTTATTACAGCAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS-3UTR TCA 90 bp | GGCCCGACTGAGGGCCCCTCAGAGCAGGTGGGCCACTCTTCCCCGCCTCACCCCCCACGCAGGCGAAGATaGAGGCCGTCAAGAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GPTEGPSEQVGHSSPPHPPRRRR*RPSRRR Trigger: TCTCCTTCTTGACGGCCTTCATCTTCGCCTGCGTGG...GGGGTGAGGCGGGGAAGAGTGGCCCACCTGCTCTGAGGGGCCCTCAGTCGGGCC 68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS-3UTR TCA 90 bp | TGGACAACCCACACGGGCCTCCGGGTCCACTCTGCCCCTGCCTCCGGTCCTGATTATGGCTGTAGGGGTTaGCAGAGGCCTCGCCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: WTTHTGLRVHSAPASGPDYGCRG*QRPRHP Trigger: GGGGTGGCGAGGCCTCTGTCAACCCCTACAGCCATA...ATCAGGACCGGAGGCAGGGGCAGAGTGGACCCGGAGGCCCGTGTGGGTTGTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS-3UTR CCA 90 bp | GAGCTCCTTAAGCCCCCGCACAGACTGGATGATCGCGGCAGGATGGCAAAGGAGGCGAAGACGCCGCCGTaGCCGGCCAGCATGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ELLKPPHRLDDRGRMAKEAKTPP*PASMSR Trigger: CCGGCTCATGCTGGCCGGCCACGGCGGCGTCTTCGC...CTCCTTTGCCATCCTGCCGCGATCATCCAGTCTGTGCGGGGGCTTAAGGAGCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS-3UTR TCA 90 bp | GAACCCAGGGCAATGGGGAAAGGGAACAGTCCAGGGGAGGACATGGGAGTCAGCCGTGGCCGGCCAGCATaGGCCGGCCTCCGCAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: EPRAMGKGNSPGEDMGVSRGRPA*AGLRSR Trigger: TCTACTGCGGAGGCCGGCTCATGCTGGCCGGCCACG...GCTGACTCCCATGTCCTCCCCTGGACTGTTCCCTTTCCCCATTGCCCTGGGTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS-3UTR CCA 90 bp | AGGAGCCCTGGGAACTGCCATTGCCAGCACACACGCCACACCACACACCGGACACAGCGGCCTCACAGATaGTGGCCCGGGGCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: RSPGNCHCQHTRHTTHRTQRPHR*WPGAGC Trigger: GCATCCTGCCCCGGGCCACCATCTGTGAGGCCGCTG...TGTCCGGTGTGTGGTGTGGCGTGTGTGCTGGCAATGGCAGTTCCCAGGGCTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS-3UTR CCA 90 bp | TGGACAACCCACACGGGCCTCCGGGTCCACTCTGCCCCTGCCTCCGGTCCTGATGAAAGAAGGGTCAGGTaGGTGACCACGCAGGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WTTHTGLRVHSAPASGPDERRVR*VTTQAK Trigger: CTTCGCCTGCGTGGTCACCCACCTGACCCTTCTTTC...ATCAGGACCGGAGGCAGGGGCAGAGTGGACCCGGAGGCCCGTGTGGGTTGTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR CAA 72 bp | CTCCCAGTGGCCCCTGGCACCCACCACTTCCCAGCTTaGTCTGGGACCCACTGGGCTCTGGAACAAGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPVAPGTHHFPA*SGTHWALEQGE Trigger: CTCTCCTTGTTCCAGAGCCCAGTGGGTCCCAGACAAAGCTGGGAAGTGGTGGGTGCCAGGGGCCACTGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS-3UTR GCA 90 bp | GAGCTCCTTAAGCCCCCGCACAGACTGGATGATCGCGGCAGGATGGCAAAGGAGCGCAGTAGAAGCGGTTaGGGCCCGGGAACACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ELLKPPHRLDDRGRMAKERSRSG*GPGTPP Trigger: GGGAGGTGTTCCCGGGCCGCAACCGCTTCTACTGCG...CTCCTTTGCCATCCTGCCGCGATCATCCAGTCTGTGCGGGGGCTTAAGGAGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS-3UTR GCA 90 bp | AGGAGCCCTGGGAACTGCCATTGCCAGCACACACGCCACACCACACACCGGACAAGTTGTCGCAGACACTaGAGTGCGAGGTCCGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSPGNCHCQHTRHTTHRTSCRRH*SARSGE Trigger: CTCCCCGGACCTCGCACTGCAGTGTCTGCGACAACT...TGTCCGGTGTGTGGTGTGGCGTGTGTGCTGGCAATGGCAGTTCCCAGGGCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS-3UTR GCA 90 bp | GAACCCAGGGCAATGGGGAAAGGGAACAGTCCAGGGGAGGACATGGGAGTCAGCGGTGGCCTCCTACCATaGTGGCGTCTGGCTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EPRAMGKGNSPGEDMGVSGGLLP*WRLAWL Trigger: GAGCCAAGCCAGACGCCAGCATGGTAGGAGGCCACC...GCTGACTCCCATGTCCTCCCCTGGACTGTTCCCTTTCCCCATTGCCCTGGGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS-3UTR CCA 90 bp | GAGCTCCTTAAGCCCCCGCACAGACTGGATGATCGCGGCAGGATGGCAAAGGAGGGCCTCCTACCATGCTaGCGTCTGGCTTGGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ELLKPPHRLDDRGRMAKEGLLPC*RLAWLH Trigger: GTGGAGCCAAGCCAGACGCCAGCATGGTAGGAGGCC...CTCCTTTGCCATCCTGCCGCGATCATCCAGTCTGTGCGGGGGCTTAAGGAGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR CAA 72 bp | GCCCCAAACCACAGCAGTCCCAGAGAGGGTCCCCACTaGTCGCCTGTGGTTCAGAGCCAGCTACTCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: APNHSSPREGPH*SPVVQSQLLSR Trigger: CCTGCTGAGTAGCTGGCTCTGAACCACAGGCGACAAGTGGGGACCCTCTCTGGGACTGCTGTGGTTTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS-3UTR TCA 90 bp | CCTCAGCCTGTCGGGGCAGGTCACAGCTGGGAGCCTAACCTGGGGGCTGGGTGGCAGGATGGACCAGATTaGGAAGAAGCAGATGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: PQPVGAGHSWEPNLGAGWQDGPD*EEADDQ Trigger: TTGGTCATCTGCTTCTTCTCAATCTGGTCCATCCTG...CCACCCAGCCCCCAGGTTAGGCTCCCAGCTGTGACCTGCCCCGACAGGCTGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS-3UTR TCA 90 bp | GAGCTCCTTAAGCCCCCGCACAGACTGGATGATCGCGGCAGGATGGCAAAGGAGGTACGTGTGGAACCCTaGGAGGCCCAGGATGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: ELLKPPHRLDDRGRMAKEVRVEP*EAQDGP Trigger: TGGTCCATCCTGGGCCTCTCAGGGTTCCACACGTAC...CTCCTTTGCCATCCTGCCGCGATCATCCAGTCTGTGCGGGGGCTTAAGGAGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS-3UTR GCA 90 bp | GAACCCAGGGCAATGGGGAAAGGGAACAGTCCAGGGGAGGACATGGGAGTCAGCGCCCCGGGGCTTATCTaGTGGTACTCGCAGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EPRAMGKGNSPGEDMGVSAPGLI*WYSQSF Trigger: GAAGGACTGCGAGTACCAGCAGATAAGCCCCGGGGC...GCTGACTCCCATGTCCTCCCCTGGACTGTTCCCTTTCCCCATTGCCCTGGGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR CAA 72 bp | CTTCTGTTTGGGGCAGAGGAGCCCTGGGAACTGCCATaGCCAGCACACACGCCACACCACACACCGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLFGAEEPWELP*PAHTPHHTPDR Trigger: TCTGTCCGGTGTGTGGTGTGGCGTGTGTGCTGGCAATGGCAGTTCCCAGGGCTCCTCTGCCCCAAACAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS-3UTR GCA 90 bp | AGAGAGTCTCTGTGGGCAGGGGGAAAGCCACGTCCCCATCCCTACTGTGCTGCCTCCGTGAAACTGGTCTaGAGGAGACAGCTCATGACG | + |
|
Preference number: 4 (lower is better) Translates to: RESLWAGGKPRPHPYCAASVKLV*RRQLMT Trigger: CGTCATGAGCTGTCTCCTGCAGACCAGTTTCACGGA...GGCAGCACAGTAGGGATGGGGACGTGGCTTTCCCCCTGCCCACAGAGACTCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS-3UTR TCA 90 bp | GAGCTCCTTAAGCCCCCGCACAGACTGGATGATCGCGGCAGGATGGCAAAGGAGGCAGGAGACAGCTCATaGCGAAGAAGAAGAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ELLKPPHRLDDRGRMAKEAGDSS*RRRRGW Trigger: CCATCCTCTTCTTCTTCGTCATGAGCTGTCTCCTGC...CTCCTTTGCCATCCTGCCGCGATCATCCAGTCTGTGCGGGGGCTTAAGGAGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS-3UTR TCA 90 bp | CTGCTAGGCTGGCCTATGGCTCTGCTGACTGGTGGCAGGCTGCGAGGCGAGATTAGGAAGTTGCTTCCTTaGGAAAGAAGGGTCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLGWPMALLTGGRLRGEIRKLLP*ERRVRW Trigger: CCACCTGACCCTTCTTTCTCAAGGAAGCAACTTCCT...AATCTCGCCTCGCAGCCTGCCACCAGTCAGCAGAGCCATAGGCCAGCCTAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR CAA 72 bp | ACGAAGCTGATCTCCCCAGGTCTGACCCTGCTCCCTTaGGGTCCTTGGAAGAACATGGAGCTGTCTAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TKLISPGLTLLP*GPWKNMELSSP Trigger: AGGGCTAGACAGCTCCATGTTCTTCCAAGGACCCAAAGGGAGCAGGGTCAGACCTGGGGAGATCAGCTTCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS-3UTR TCA 90 bp | GTGGGAACAGCGTCAAGCCCGTTGTGCTTAGAGCAGTTGCCAAACTTGTTCAGCCCCACCCAAGGGCAGTaGTGGTCAAACCGTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VGTASSPLCLEQLPNLFSPTQGQ*WSNRST Trigger: TGTGGAACGGTTTGACCATCACTGCCCTTGGGTGGG...GCTGAACAAGTTTGGCAACTGCTCTAAGCACAACGGGCTTGACGCTGTTCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS-3UTR GCA 90 bp | TCCTCTCCTGCCACTGACCAGCTAGGGGGCCTAAGGCCTAAACTGTGGGAACCTGAGCGGAGAGGAAGTTaGTTCCTTGAGAAAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSPATDQLGGLRPKLWEPERRGS*FLEKEG Trigger: CCCTTCTTTCTCAAGGAAGCAACTTCCTCTCCGCTC...AGGTTCCCACAGTTTAGGCCTTAGGCCCCCTAGCTGGTCAGTGGCAGGAGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS-3UTR CCA 90 bp | GTGGGAACAGCGTCAAGCCCGTTGTGCTTAGAGCAGTTGCCAAACTTGTTCAGCGGGGCGGTCGGTATGTaGAGCTGCCTGTGTTATCGA | + |
|
Preference number: 4 (lower is better) Translates to: VGTASSPLCLEQLPNLFSGAVGM*SCLCYR Trigger: TCGATAACACAGGCAGCTCCACATACCGACCGCCCC...GCTGAACAAGTTTGGCAACTGCTCTAAGCACAACGGGCTTGACGCTGTTCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS-3UTR CCA 90 bp | AAGGTTCAGCAGTGTTACAGTACTGTGCTGAGGCTGCGGTATGGCTTTCTACACGCCACGAGGTACGTGTaGAACCCTGAGAGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KVQQCYSTVLRLRYGFLHATRYV*NPERPR Trigger: CCTGGGCCTCTCAGGGTTCCACACGTACCTCGTGGC...GTGTAGAAAGCCATACCGCAGCCTCAGCACAGTACTGTAACACTGCTGAACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS-3UTR CCA 90 bp | GCTGAGCAATCAACCACTGGGGATCAGGGTGGAAAGTTAGCAGGAAAGAACTCAGCCGGTCAATCAGGCTaGGAGGCAGTGGGCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: AEQSTTGDQGGKLAGKNSAGQSG*EAVGHR Trigger: TCTGTGGCCCACTGCCTCCCAGCCTGATTGACCGGC...TGAGTTCTTTCCTGCTAACTTTCCACCCTGATCCCCAGTGGTTGATTGCTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR CAA 72 bp | GTGGGAACAGCGTCAAGCCCGTTGTGCTTAGAGCAGTaGCCAAACTTGTTCAGCAGCGTCATCAACACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VGTASSPLCLEQ*PNLFSSVINTQ Trigger: CTGGGTGTTGATGACGCTGCTGAACAAGTTTGGCAACTGCTCTAAGCACAACGGGCTTGACGCTGTTCCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| 3UTR CAA 72 bp | GCGTCAAGCCCGTTGTGCTTAGAGCAGTTGCCAAACTaGTTCAGCAGCGTCATCAACACCCAGATAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASSPLCLEQLPN*FSSVINTQIAP Trigger: AGGAGCTATCTGGGTGTTGATGACGCTGCTGAACAAGTTTGGCAACTGCTCTAAGCACAACGGGCTTGACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS GCA 90 bp | GCCGGGTCATCACTTCTGATGGGCGAGGGCAACGCGGTATCAGACTaGACGAATCCTCGCCGGTCAATCAGGCTGGGAGGCAGTGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AGSSLLMGEGNAVSD*TNPRRSIRLGGSGP Trigger: TGGCCCACTGCCTCCCAGCCTGATTGACCGGCGAGGATTCGTGCAGTCTGATACCGCGTTGCCCTCGCCCATCAGAAGTGATGACCCGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS GCA 90 bp | CAGATGGTGGCCCGGGGCAGGATGCCAGGGTCCGTGAAACTGGTCTaGAGGAGACAGCTCATGACGAAGAAGAAGAGGATGGCAGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: QMVARGRMPGSVKLV*RRQLMTKKKRMAAM Trigger: CATCGCTGCCATCCTCTTCTTCTTCGTCATGAGCTGTCTCCTGCAGACCAGTTTCACGGACCCTGGCATCCTGCCCCGGGCCACCATCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS-3UTR CAA 90 bp | GTTCTAAGGAAGCCTAGGCCAAGGGGGAGGTGGGACAAGACTAAGAGCCTTCTGTCGTTAGTTGTCAGGTaGGAGGCCACGAGGTACGTG | + |
|
Preference number: 5 (lower is better) Translates to: VLRKPRPRGRWDKTKSLLSLVVR*EATRYV Trigger: CACGTACCTCGTGGCCTCCAACCTGACAACTAACGA...CAGAAGGCTCTTAGTCTTGTCCCACCTCCCCCTTGGCCTAGGCTTCCTTAGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS GCA 90 bp | GGCCGAAACATCTTACAGGTGAAGCAATACTTGAGTTTCACTGTCTaGCCGTTGATCATCACCTCCCGAGTCCGAGGGGGCGGTCGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GRNILQVKQYLSFTV*PLIITSRVRGGGRY Trigger: ATACCGACCGCCCCCTCGGACTCGGGAGGTGATGATCAACGGGCAGACAGTGAAACTCAAGTATTGCTTCACCTGTAAGATGTTTCGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
||
| CDS-3UTR CAA 90 bp | GTTCTAAGGAAGCCTAGGCCAAGGGGGAGGTGGGACAAGACTAAGAGCCTTCTGCAGGTGAAGCAATACTaGAGTTTCACTGTCTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: VLRKPRPRGRWDKTKSLLQVKQY*SFTVCP Trigger: CGGGCAGACAGTGAAACTCAAGTATTGCTTCACCTG...CAGAAGGCTCTTAGTCTTGTCCCACCTCCCCCTTGGCCTAGGCTTCCTTAGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| CDS-3UTR CAA 90 bp | AGGCTGTGCAGGAGATGGCAAAGTCCTGACAAGTGTCCTCCTGGAGGAGATACCCCAACTCCAGCACACTaGCTGGTGTCTTTTTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: RLCRRWQSPDKCPPGGDTPTPAH*LVSFSE Trigger: CTCTGAAAAAGACACCAGCAAGTGTGCTGGAGTTGG...GGTATCTCCTCCAGGAGGACACTTGTCAGGACTTTGCCATCTCCTGCACAGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| CDS-3UTR CAA 90 bp | GCTGAGCAATCAACCACTGGGGATCAGGGTGGAAAGTTAGCAGGAAAGAACTCATTCACTGTCTGCCCGTaGATCATCACCTCCCGAGTC | + |
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Preference number: 5 (lower is better) Translates to: AEQSTTGDQGGKLAGKNSFTVCP*IITSRV Trigger: GACTCGGGAGGTGATGATCAACGGGCAGACAGTGAA...TGAGTTCTTTCCTGCTAACTTTCCACCCTGATCCCCAGTGGTTGATTGCTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| CDS-3UTR CAA 90 bp | CAGTGTTACAGTACTGTGCTGAGGCTGCGGTATGGCTTTCTACACTCTGGCCAGGAGGAAGTTGCTTCCTaGAGAAAGAAGGGTCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: QCYSTVLRLRYGFLHSGQEEVAS*RKKGQV Trigger: CACCTGACCCTTCTTTCTCAAGGAAGCAACTTCCTC...CTGGCCAGAGTGTAGAAAGCCATACCGCAGCCTCAGCACAGTACTGTAACACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| CDS-3UTR CAA 90 bp | GTGGGAACAGCGTCAAGCCCGTTGTGCTTAGAGCAGTTGCCAAACTTGTTCAGCAGCACAGCACAGCAGTaGGTGATAATACTTTTATGG | + |
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Preference number: 5 (lower is better) Translates to: VGTASSPLCLEQLPNLFSSTAQQ*VIILLW Trigger: CCATAAAAGTATTATCACCAACTGCTGTGCTGTGCT...GCTGAACAAGTTTGGCAACTGCTCTAAGCACAACGGGCTTGACGCTGTTCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| CDS GCA 72 bp | GGCGGTCGGTATGTGGAGCTGCCTGTGTTATCGATCTaGTTCTCCAGGGCAGCGGCCTCACAGATGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: GGRYVELPVLSI*FSRAAASQMVA Trigger: GGCCACCATCTGTGAGGCCGCTGCCCTGGAGAAGCAGATCGATAACACAGGCAGCTCCACATACCGACCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| CDS GCA 72 bp | TCACTTCTGATGGGCGAGGGCAACGCGGTATCAGACTaGACGAATCCTCGCCGGTCAATCAGGCTGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: SLLMGEGNAVSD*TNPRRSIRLGG Trigger: GCCTCCCAGCCTGATTGACCGGCGAGGATTCGTGCAGTCTGATACCGCGTTGCCCTCGCCCATCAGAAGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| CDS CCA 72 bp | TCATCACCTCCCGAGTCCGAGGGGGCGGTCGGTATGTaGAGCTGCCTGTGTTATCGATCTGCTTCTCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SSPPESEGAVGM*SCLCYRSASPG Trigger: CCCTGGAGAAGCAGATCGATAACACAGGCAGCTCCACATACCGACCGCCCCCTCGGACTCGGGAGGTGATGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| CDS GCA 72 bp | GCCCGGGGCAGGATGCCAGGGTCCGTGAAACTGGTCTaGAGGAGACAGCTCATGACGAAGAAGAAGAGGATG | + |
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Preference number: 6 (lower is better) Translates to: ARGRMPGSVKLV*RRQLMTKKKRM Trigger: CATCCTCTTCTTCTTCGTCATGAGCTGTCTCCTGCAGACCAGTTTCACGGACCCTGGCATCCTGCCCCGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| CDS CAA 72 bp | CAGGTGAAGCAATACTTGAGTTTCACTGTCTGCCCGTaGATCATCACCTCCCGAGTCCGAGGGGGCGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: QVKQYLSFTVCP*IITSRVRGGGR Trigger: CCGACCGCCCCCTCGGACTCGGGAGGTGATGATCAACGGGCAGACAGTGAAACTCAAGTATTGCTTCACCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| CDS CAA 72 bp | TGGTGTCTTTTTCAGAGCGGAGAGGAAGTTGCTTCCTaGAGAAAGAAGGGTCAGGTGGGTGACCACGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: WCLFQSGEEVAS*RKKGQVGDHAG Trigger: GCCTGCGTGGTCACCCACCTGACCCTTCTTTCTCAAGGAAGCAACTTCCTCTCCGCTCTGAAAAAGACACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| CDS CAA 90 bp | AACATCTTACAGGTGAAGCAATACTTGAGTTTCACTGTCTGCCCGTaGATCATCACCTCCCGAGTCCGAGGGGGCGGTCGGTATGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: NILQVKQYLSFTVCP*IITSRVRGGGRYVE Trigger: CTCCACATACCGACCGCCCCCTCGGACTCGGGAGGTGATGATCAACGGGCAGACAGTGAAACTCAAGTATTGCTTCACCTGTAAGATGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| CDS GCA 72 bp | ATCTTACAGGTGAAGCAATACTTGAGTTTCACTGTCTaGCCGTTGATCATCACCTCCCGAGTCCGAGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: ILQVKQYLSFTV*PLIITSRVRGG Trigger: GCCCCCTCGGACTCGGGAGGTGATGATCAACGGGCAGACAGTGAAACTCAAGTATTGCTTCACCTGTAAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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| CDS CAA 72 bp | GACCAAGACCCTTTGATATCTTCGTTAGTTGTCAGGTaGGAGGCCACGAGGTACGTGTGGAACCCTGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: DQDPLISSLVVR*EATRYVWNPER Trigger: CCTCTCAGGGTTCCACACGTACCTCGTGGCCTCCAACCTGACAACTAACGAAGATATCAAAGGGTCTTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084238.5 |
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