Pregenerated sensors for ZDHHC16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025157Ensembl transcript IDs: ENSMUST00000026154.9, ENSMUST00000223802.2, ENSMUST00000224258.2, ENSMUST00000224537.2, ENSMUST00000224562.2, ENSMUST00000224896.2, ENSMUST00000225968.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCCAGGGAGGAGGGTCCCAGCTCATCCCATTCCCATGGGGCAGGTaGCTAGAAGGTAACAGCACCCGGGTCAGCCAATGCCTTCCTGTG | + |
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Preference number: 1 (lower is better) Translates to: TQGGGSQLIPFPWGR*LEGNSTRVSQCLPV Trigger: CACAGGAAGGCATTGGCTGACCCGGGTGCTGTTACCTTCTAGTCACCTGCCCCATGGGAATGGGATGAGCTGGGACCCTCCTCCCTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| 3UTR TCA 90 bp | AATAGTGTTCAAGTTGTGGCTTACACGGCCATCACAGAGGCTGAGTaGGCAGTCACCCAGGGAGGAGGGTCCCAGCTCATCCCATTCCCA | + |
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Preference number: 1 (lower is better) Translates to: NSVQVVAYTAITEAE*AVTQGGGSQLIPFP Trigger: TGGGAATGGGATGAGCTGGGACCCTCCTCCCTGGGTGACTGCTCACTCAGCCTCTGTGATGGCCGTGTAAGCCACAACTTGAACACTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| 3UTR GCA 90 bp | ACCCTGCCCTTGGCCTGTAACCGGCGCCTCTCCTTCTTGTTGATATaGCTTTCGATGCTAGTCTCACCCCGACTGATGAGAACAGCATGC | + |
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Preference number: 1 (lower is better) Translates to: TLPLACNRRLSFLLI*LSMLVSPRLMRTAC Trigger: GCATGCTGTTCTCATCAGTCGGGGTGAGACTAGCATCGAAAGGCATATCAACAAGAAGGAGAGGCGCCGGTTACAGGCCAAGGGCAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| 3UTR TCA 90 bp | GAAATGGCAGTGACCTTGGCAATAGGCTTACTGTCTTTGTCCCGTTaGGAAGCCAGAGTTTCAACATACCTGATGGATCTTTTCCCAAAG | + |
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Preference number: 1 (lower is better) Translates to: EMAVTLAIGLLSLSR*EARVSTYLMDLFPK Trigger: CTTTGGGAAAAGATCCATCAGGTATGTTGAAACTCTGGCTTCTCAACGGGACAAAGACAGTAAGCCTATTGCCAAGGTCACTGCCATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
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| 3UTR TCA 90 bp | GCTTACTGTCTTTGTCCCGTTGAGAAGCCAGAGTTTCAACATACCTaGTGGATCTTTTCCCAAAGTGAAAGAAAGAGATGGTGTCTAGCC | + |
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Preference number: 1 (lower is better) Translates to: AYCLCPVEKPEFQHT*WIFSQSERKRWCLA Trigger: GGCTAGACACCATCTCTTTCTTTCACTTTGGGAAAAGATCCATCAGGTATGTTGAAACTCTGGCTTCTCAACGGGACAAAGACAGTAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
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| 3UTR TCA 90 bp | TTTTTACAAATCAAATGCCTTTATTTTCGCTCCCTCTGTAGCACGTaGGAAATGGCAGTGACCTTGGCAATAGGCTTACTGTCTTTGTCC | + |
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Preference number: 1 (lower is better) Translates to: FLQIKCLYFRSLCST*EMAVTLAIGLLSLS Trigger: GGACAAAGACAGTAAGCCTATTGCCAAGGTCACTGCCATTTCTCACGTGCTACAGAGGGAGCGAAAATAAAGGCATTTGATTTGTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026154.9 |
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| 3UTR CAA 90 bp | CTAAACACCCTGCCCTTGGCCTGTAACCGGCGCCTCTCCTTCTTGTaGATATGCCTTTCGATGCTAGTCTCACCCCGACTGATGAGAACA | + |
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Preference number: 2 (lower is better) Translates to: LNTLPLACNRRLSFL*ICLSMLVSPRLMRT Trigger: TGTTCTCATCAGTCGGGGTGAGACTAGCATCGAAAGGCATATCAACAAGAAGGAGAGGCGCCGGTTACAGGCCAAGGGCAGGGTGTTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| 3UTR CAA 90 bp | TTCCTAAACACCCTGCCCTTGGCCTGTAACCGGCGCCTCTCCTTCTaGTTGATATGCCTTTCGATGCTAGTCTCACCCCGACTGATGAGA | + |
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Preference number: 2 (lower is better) Translates to: FLNTLPLACNRRLSF*LICLSMLVSPRLMR Trigger: TCTCATCAGTCGGGGTGAGACTAGCATCGAAAGGCATATCAACAAGAAGGAGAGGCGCCGGTTACAGGCCAAGGGCAGGGTGTTTAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCTGATGGCTCTTCATGGTCATGGATTCCAGGAAAAGCTGCCCTTGGAAGCTGATTCCAGGAAAAGCTaGCCTTGGAAGCTCTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: SLMALHGHGFQEKLPLEADSRKS*PWKLLR Trigger: TCTCAAGAGCTTCCAAGGGCAGCTTTTCCTGGAATC...AGCTTCCAAGGGCAGCTTTTCCTGGAATCCATGACCATGAAGAGCCATCAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
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| 3UTR-3UTR GCA 90 bp | TTCATGGTCATGGATTCCAGGAAAAGCTGCCCTTGGAAGCTCTTGAGAGACAATCCAGGGCCACAGAACTaGACAGGAACCAGAGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: FMVMDSRKSCPWKLLRDNPGPQN*TGTRGR Trigger: TCTACCTCTGGTTCCTGTGCAGTTCTGTGGCCCTGG...ATTGTCTCTCAAGAGCTTCCAAGGGCAGCTTTTCCTGGAATCCATGACCATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| 3UTR-3UTR GCA 90 bp | ATGGTCATGGATTCCAGGAAAAGCTGCCCTTGGAAGCTCTTGAGAGACAATAAAACCCGGGTCAGCCAATaGCTTCCTGTGTCCACACCT | + |
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Preference number: 2 (lower is better) Translates to: MVMDSRKSCPWKLLRDNKTRVSQ*LPVSTP Trigger: AGGTGTGGACACAGGAAGGCATTGGCTGACCCGGGT...TTTATTGTCTCTCAAGAGCTTCCAAGGGCAGCTTTTCCTGGAATCCATGACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCAATGGCAGCATAAGCCTCCCGGAAAAGGTCCCAACTTCCATAGCTACAGTGGCTCTTCATGGTCATaGATTCCAGGAAAAGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: SQWQHKPPGKGPNFHSYSGSSWS*IPGKAA Trigger: GGCAGCTTTTCCTGGAATCCATGACCATGAAGAGCC...ACTGTAGCTATGGAAGTTGGGACCTTTTCCGGGAGGCTTATGCTGCCATTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTACGTCTGGTTGGCAATCGCCTGTAGTTTGTTCTTGTCAAGCTGTTTCATTACTCTAAGGCAAGCCTaGTGGCTCTTCATGGTCATG | + |
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Preference number: 2 (lower is better) Translates to: WYVWLAIACSLFLSSCFITLRQA*WLFMVM Trigger: CATGACCATGAAGAGCCATCAGGCTTGCCTTAGAGT...AATGAAACAGCTTGACAAGAACAAACTACAGGCGATTGCCAACCAGACGTACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTTCTCCACACTGCATCTTGTTTTTAGGTGGCAGAAGATTGGTCTTGATTGTTCCCTCTGTAGCACGTaGGAAATGGCAGTGACCTTG | + |
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Preference number: 2 (lower is better) Translates to: SFSTLHLVFRWQKIGLDCSLCST*EMAVTL Trigger: CAAGGTCACTGCCATTTCTCACGTGCTACAGAGGGA...ACAATCAAGACCAATCTTCTGCCACCTAAAAACAAGATGCAGTGTGGAGAAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTTGAGAGACAATAAACATCAAATAGTGTTCAAGTTGTGGCTTACACGGCCACTGATGAGAACAGCATaGCACATGGTTAGGGCACCC | + |
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Preference number: 2 (lower is better) Translates to: LLRDNKHQIVFKLWLTRPLMRTA*HMVRAP Trigger: GGGTGCCCTAACCATGTGGCATGCTGTTCTCATCAG...TGGCCGTGTAAGCCACAACTTGAACACTATTTGATGTTTATTGTCTCTCAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| 3UTR-3UTR CCA 90 bp | GCAAGCCTGATGGCTCTTCATGGTCATGGATTCCAGGAAAAGCTGCCCTTGGAACATCTTGTTTTTAGGTaGCAGAAGATTGGTCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: ASLMALHGHGFQEKLPLEHLVFR*QKIGLD Trigger: ATCAAGACCAATCTTCTGCCACCTAAAAACAAGATG...TTCCAAGGGCAGCTTTTCCTGGAATCCATGACCATGAAGAGCCATCAGGCTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
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| 3UTR CAA 90 bp | AGAAATGGCAGTGACCTTGGCAATAGGCTTACTGTCTTTGTCCCGTaGAGAAGCCAGAGTTTCAACATACCTGATGGATCTTTTCCCAAA | + |
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Preference number: 2 (lower is better) Translates to: RNGSDLGNRLTVFVP*RSQSFNIPDGSFPK Trigger: TTTGGGAAAAGATCCATCAGGTATGTTGAAACTCTGGCTTCTCAACGGGACAAAGACAGTAAGCCTATTGCCAAGGTCACTGCCATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCTAAAACTTATTTGCCTGAGTAAAGGGACTTCAATCCTTGAGTTTCTCCACACTCTAAGGCAAGCCTaGTGGCTCTTCATGGTCATG | + |
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Preference number: 2 (lower is better) Translates to: ELKLICLSKGTSILEFLHTLRQA*WLFMVM Trigger: CATGACCATGAAGAGCCATCAGGCTTGCCTTAGAGT...GTGGAGAAACTCAAGGATTGAAGTCCCTTTACTCAGGCAAATAAGTTTTAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGTTGATATGCCTTTCGATGCTAGTCTCACCCCGACTGATGAGAACAGCATGGATCTTTTCCCAAAGTaGAAGAAAGAGATGGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: LVDMPFDASLTPTDENSMDLFPK*KKEMVS Trigger: AGACACCATCTCTTTCTTTCACTTTGGGAAAAGATC...CATGCTGTTCTCATCAGTCGGGGTGAGACTAGCATCGAAAGGCATATCAACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| 3UTR-3UTR GCA 90 bp | CAATCGCCTGTAGTTTGTTCTTGTCAAGCTGTTTCATTTTCTCAATGGCAGCATGATTCCAGGAAAAGCTaGCCTTGGAAGCTCTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: QSPVVCSCQAVSFSQWQHDSRKS*PWKLLR Trigger: TCTCAAGAGCTTCCAAGGGCAGCTTTTCCTGGAATC...ATGCTGCCATTGAGAAAATGAAACAGCTTGACAAGAACAAACTACAGGCGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCATCTTGTTTTTAGGTGGCAGAAGATTGGTCTTGATTGTCCCTGTGTAGTAAGGAAAAGCTGCCCTTaGAAGCTCTTGAGAGACAAT | + |
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Preference number: 2 (lower is better) Translates to: LHLVFRWQKIGLDCPCVVRKSCP*KLLRDN Trigger: ATTGTCTCTCAAGAGCTTCCAAGGGCAGCTTTTCCT...TACTACACAGGGACAATCAAGACCAATCTTCTGCCACCTAAAAACAAGATGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
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| 3UTR CAA 90 bp | CTCTTCATGGTCATGGATTCCAGGAAAAGCTGCCCTTGGAAGCTCTaGAGAGACAATAAACATCAAATAGTGTTCAAGTTGTGGCTTACA | + |
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Preference number: 2 (lower is better) Translates to: LFMVMDSRKSCPWKL*RDNKHQIVFKLWLT Trigger: TGTAAGCCACAACTTGAACACTATTTGATGTTTATTGTCTCTCAAGAGCTTCCAAGGGCAGCTTTTCCTGGAATCCATGACCATGAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| 3UTR GCA 72 bp | TCGATGCTAGTCTCACCCCGACTGATGAGAACAGCATaGCACATGGTTAGGGCACCCAGGGCCAGGGCCACA | + |
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Preference number: 3 (lower is better) Translates to: SMLVSPRLMRTA*HMVRAPRARAT Trigger: TGTGGCCCTGGCCCTGGGTGCCCTAACCATGTGGCATGCTGTTCTCATCAGTCGGGGTGAGACTAGCATCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| 3UTR TCA 72 bp | TGTTCAAGTTGTGGCTTACACGGCCATCACAGAGGCTaGGTGAGCAGTCACCCAGGGAGGAGGGTCCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: CSSCGLHGHHRG*VSSHPGRRVPA Trigger: AGCTGGGACCCTCCTCCCTGGGTGACTGCTCACTCAGCCTCTGTGATGGCCGTGTAAGCCACAACTTGAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| 3UTR GCA 72 bp | TTGGCCTGTAACCGGCGCCTCTCCTTCTTGTTGATATaGCTTTCGATGCTAGTCTCACCCCGACTGATGAGA | + |
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Preference number: 3 (lower is better) Translates to: LACNRRLSFLLI*LSMLVSPRLMR Trigger: TCTCATCAGTCGGGGTGAGACTAGCATCGAAAGGCATATCAACAAGAAGGAGAGGCGCCGGTTACAGGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| 3UTR-3UTR CAA 90 bp | GCAAGCCTGATGGCTCTTCATGGTCATGGATTCCAGGAAAAGCTGCCCTTGGAACAGGAAAAGCTGCCCTaGGAAGCTCTTGAGAGACAA | + |
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Preference number: 3 (lower is better) Translates to: ASLMALHGHGFQEKLPLEQEKLP*EALERQ Trigger: TTGTCTCTCAAGAGCTTCCAAGGGCAGCTTTTCCTG...TTCCAAGGGCAGCTTTTCCTGGAATCCATGACCATGAAGAGCCATCAGGCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
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| 3UTR CCA 72 bp | ATCCTTTCTCGAAAGGAGAAGGTAGGTGGTGGAGTCTaGTGGTACGTCTGGTTGGCAATCGCCTGTAGTTTG | + |
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Preference number: 3 (lower is better) Translates to: ILSRKEKVGGGV*WYVWLAIACSL Trigger: CAAACTACAGGCGATTGCCAACCAGACGTACCACCAGACTCCACCACCTACCTTCTCCTTTCGAGAAAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| 3UTR CCA 72 bp | CTTGTGAGTTATCCTTTCTCGAAAGGAGAAGGTAGGTaGTGGAGTCTGGTGGTACGTCTGGTTGGCAATCGC | + |
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Preference number: 3 (lower is better) Translates to: LVSYPFSKGEGR*WSLVVRLVGNR Trigger: GCGATTGCCAACCAGACGTACCACCAGACTCCACCACCTACCTTCTCCTTTCGAGAAAGGATAACTCACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| 3UTR-3UTR CAA 90 bp | GCAAGCCTGATGGCTCTTCATGGTCATGGATTCCAGGAAAAGCTGCCCTTGGAAGAAATGGCAGTGACCTaGGCAATAGGCTTACTGTCT | + |
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Preference number: 3 (lower is better) Translates to: ASLMALHGHGFQEKLPLEEMAVT*AIGLLS Trigger: AGACAGTAAGCCTATTGCCAAGGTCACTGCCATTTC...TTCCAAGGGCAGCTTTTCCTGGAATCCATGACCATGAAGAGCCATCAGGCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
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| 3UTR-3UTR CAA 90 bp | GCAAGCCTGATGGCTCTTCATGGTCATGGATTCCAGGAAAAGCTGCCCTTGGAAAAGGGACTTCAATCCTaGAGTTTCTCCACACTGCAT | + |
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Preference number: 3 (lower is better) Translates to: ASLMALHGHGFQEKLPLEKGLQS*SFSTLH Trigger: ATGCAGTGTGGAGAAACTCAAGGATTGAAGTCCCTT...TTCCAAGGGCAGCTTTTCCTGGAATCCATGACCATGAAGAGCCATCAGGCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
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| 3UTR-3UTR CAA 90 bp | ATATGCCTTTCGATGCTAGTCTCACCCCGACTGATGAGAACAGCATGCCACATGTCTCCACACTGCATCTaGTTTTTAGGTGGCAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: ICLSMLVSPRLMRTACHMSPHCI*FLGGRR Trigger: TCTTCTGCCACCTAAAAACAAGATGCAGTGTGGAGA...CATGTGGCATGCTGTTCTCATCAGTCGGGGTGAGACTAGCATCGAAAGGCATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| 3UTR-3UTR CAA 90 bp | GATATGCCTTTCGATGCTAGTCTCACCCCGACTGATGAGAACAGCATGCCACATGCAATCGCCTGTAGTTaGTTCTTGTCAAGCTGTTTC | + |
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Preference number: 3 (lower is better) Translates to: DMPFDASLTPTDENSMPHAIACS*FLSSCF Trigger: GAAACAGCTTGACAAGAACAAACTACAGGCGATTGC...ATGTGGCATGCTGTTCTCATCAGTCGGGGTGAGACTAGCATCGAAAGGCATATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| 3UTR-3UTR CAA 90 bp | TCCACACTGCATCTTGTTTTTAGGTGGCAGAAGATTGGTCTTGATTGTCCCTGTTGGTGGTACGTCTGGTaGGCAATCGCCTGTAGTTTG | + |
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Preference number: 3 (lower is better) Translates to: STLHLVFRWQKIGLDCPCWWYVW*AIACSL Trigger: CAAACTACAGGCGATTGCCAACCAGACGTACCACCA...ACAGGGACAATCAAGACCAATCTTCTGCCACCTAAAAACAAGATGCAGTGTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| 3UTR-3UTR CAA 90 bp | GCTCGGCTGGAGCTAAAACTTATTTGCCTGAGTAAAGGGACTTCAATCCTTGAGTTAGGTGGCAGAAGATaGGTCTTGATTGTCCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: ARLELKLICLSKGTSILELGGRR*VLIVPV Trigger: CACAGGGACAATCAAGACCAATCTTCTGCCACCTAA...CTCAAGGATTGAAGTCCCTTTACTCAGGCAAATAAGTTTTAGCTCCAGCCGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
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| 3UTR TCA 72 bp | GTGACCTTGGCAATAGGCTTACTGTCTTTGTCCCGTTaGGAAGCCAGAGTTTCAACATACCTGATGGATCTT | + |
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Preference number: 3 (lower is better) Translates to: VTLAIGLLSLSR*EARVSTYLMDL Trigger: AAGATCCATCAGGTATGTTGAAACTCTGGCTTCTCAACGGGACAAAGACAGTAAGCCTATTGCCAAGGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
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| 3UTR TCA 72 bp | ATCAAATGCCTTTATTTTCGCTCCCTCTGTAGCACGTaGGAAATGGCAGTGACCTTGGCAATAGGCTTACTG | + |
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Preference number: 3 (lower is better) Translates to: IKCLYFRSLCST*EMAVTLAIGLL Trigger: CAGTAAGCCTATTGCCAAGGTCACTGCCATTTCTCACGTGCTACAGAGGGAGCGAAAATAAAGGCATTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
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| 3UTR-3UTR CAA 90 bp | TTCTTGTTGATATGCCTTTCGATGCTAGTCTCACCCCGACTGATGAGAACAGCATGCCCTTGGAAGCTCTaGAGAGACAATAAACATCAA | + |
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Preference number: 3 (lower is better) Translates to: FLLICLSMLVSPRLMRTACPWKL*RDNKHQ Trigger: TTGATGTTTATTGTCTCTCAAGAGCTTCCAAGGGCA...TGCTGTTCTCATCAGTCGGGGTGAGACTAGCATCGAAAGGCATATCAACAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| 3UTR TCA 72 bp | AGAGTTTCAACATACCTGATGGATCTTTTCCCAAAGTaGAAGAAAGAGATGGTGTCTAGCCCCAGTGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: RVSTYLMDLFPK*KKEMVSSPSAV Trigger: CACAGCACTGGGGCTAGACACCATCTCTTTCTTTCACTTTGGGAAAAGATCCATCAGGTATGTTGAAACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
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| 3UTR TCA 72 bp | CTTTGTCCCGTTGAGAAGCCAGAGTTTCAACATACCTaGTGGATCTTTTCCCAAAGTGAAAGAAAGAGATGG | + |
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Preference number: 3 (lower is better) Translates to: LCPVEKPEFQHT*WIFSQSERKRW Trigger: CCATCTCTTTCTTTCACTTTGGGAAAAGATCCATCAGGTATGTTGAAACTCTGGCTTCTCAACGGGACAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
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| 3UTR-3UTR CAA 90 bp | CTGCATCTTGTTTTTAGGTGGCAGAAGATTGGTCTTGATTGTCCCTGTGTAGTATGCCCTTGGAAGCTCTaGAGAGACAATAAACATCAA | + |
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Preference number: 3 (lower is better) Translates to: LHLVFRWQKIGLDCPCVVCPWKL*RDNKHQ Trigger: TTGATGTTTATTGTCTCTCAAGAGCTTCCAAGGGCA...TACTACACAGGGACAATCAAGACCAATCTTCTGCCACCTAAAAACAAGATGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
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| CDS-3UTR TCA 90 bp | AGCCTGATGGCTCTTCATGGTCATGGATTCCAGGAAAAGCTGCCCTTGGAAGCTGGCCATCACAGAGGCTaGGTGAGCAGTCACCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SLMALHGHGFQEKLPLEAGHHRG*VSSHPG Trigger: CCCTGGGTGACTGCTCACTCAGCCTCTGTGATGGCC...AGCTTCCAAGGGCAGCTTTTCCTGGAATCCATGACCATGAAGAGCCATCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026154.9 |
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| 3UTR CAA 72 bp | CTGCCCTTGGCCTGTAACCGGCGCCTCTCCTTCTTGTaGATATGCCTTTCGATGCTAGTCTCACCCCGACTG | + |
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Preference number: 4 (lower is better) Translates to: LPLACNRRLSFL*ICLSMLVSPRL Trigger: CAGTCGGGGTGAGACTAGCATCGAAAGGCATATCAACAAGAAGGAGAGGCGCCGGTTACAGGCCAAGGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| 3UTR CAA 72 bp | ACCCTGCCCTTGGCCTGTAACCGGCGCCTCTCCTTCTaGTTGATATGCCTTTCGATGCTAGTCTCACCCCGA | + |
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Preference number: 4 (lower is better) Translates to: TLPLACNRRLSF*LICLSMLVSPR Trigger: TCGGGGTGAGACTAGCATCGAAAGGCATATCAACAAGAAGGAGAGGCGCCGGTTACAGGCCAAGGGCAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| CDS-3UTR TCA 90 bp | AGCCTGATGGCTCTTCATGGTCATGGATTCCAGGAAAAGCTGCCCTTGGAAGCTATCACAGAGGCTGAGTaGGCAGTCACCCAGGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: SLMALHGHGFQEKLPLEAITEAE*AVTQGG Trigger: TCCTCCCTGGGTGACTGCTCACTCAGCCTCTGTGAT...AGCTTCCAAGGGCAGCTTTTCCTGGAATCCATGACCATGAAGAGCCATCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026154.9 |
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| CDS-3UTR CCA 90 bp | GCAAGCCTGATGGCTCTTCATGGTCATGGATTCCAGGAAAAGCTGCCCTTGGAAATGCCAGCAGAGCCGTaGTACCGAGTAGGTTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: ASLMALHGHGFQEKLPLEMPAEP*YRVGSE Trigger: CTCCGAACCTACTCGGTACCACGGCTCTGCTGGCAT...TTCCAAGGGCAGCTTTTCCTGGAATCCATGACCATGAAGAGCCATCAGGCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
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| CDS-3UTR GCA 90 bp | AGCCTGATGGCTCTTCATGGTCATGGATTCCAGGAAAAGCTGCCCTTGGAAGCTCCAGGGCCACAGAACTaGACAGGAACCAGAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLMALHGHGFQEKLPLEAPGPQN*TGTRGR Trigger: TCTACCTCTGGTTCCTGTGCAGTTCTGTGGCCCTGG...AGCTTCCAAGGGCAGCTTTTCCTGGAATCCATGACCATGAAGAGCCATCAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026154.9 |
||
| CDS-3UTR TCA 90 bp | TGGCTCTTCATGGTCATGGATTCCAGGAAAAGCTGCCCTTGGAAGCTCTTGAGAAGTAGGTTCGGAGGATaGGGGGCAGGACACACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: WLFMVMDSRKSCPWKLLRSRFGG*GAGHTD Trigger: ATCTGTGTGTCCTGCCCCTCATCCTCCGAACCTACT...TCTCAAGAGCTTCCAAGGGCAGCTTTTCCTGGAATCCATGACCATGAAGAGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
||
| CDS-3UTR TCA 90 bp | CATCTTCAGCACACACCTGTGAGGGAGGGACACAGGCTCTGTTACGGTGGCCAAAGTAATGGAAGACGATaGGGATCAGATTCCAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HLQHTPVREGHRLCYGGQSNGRR*GSDSSD Trigger: GTCACTGGAATCTGATCCTCATCGTCTTCCATTACT...TTGGCCACCGTAACAGAGCCTGTGTCCCTCCCTCACAGGTGTGTGCTGAAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
||
| CDS-3UTR GCA 90 bp | GATGATCCATCTTCAGCACACACCTGTGAGGGAGGGACACAGGCTCTGTTACGGCAACGGCAGTGTCACTaGCTCCAAAGGAATTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: DDPSSAHTCEGGTQALLRQRQCH*LQRNCR Trigger: TCTACAATTCCTTTGGAGGCAGTGACACTGCCGTTG...CCGTAACAGAGCCTGTGTCCCTCCCTCACAGGTGTGTGCTGAAGATGGATCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTCTTCATGGTCATGGATTCCAGGAAAAGCTGCCCTTGGAAGCTCTTGAGAGGTGGTACGTCTCAATaGCAGCATAAGCCTCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: WLFMVMDSRKSCPWKLLRGGTSQ*QHKPPG Trigger: TCCGGGAGGCTTATGCTGCCATTGAGACGTACCACC...TCTCAAGAGCTTCCAAGGGCAGCTTTTCCTGGAATCCATGACCATGAAGAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026154.9 |
||
| CDS-3UTR GCA 90 bp | GCTCGGCTGGAGCTAAAACTTATTTGCCTGAGTAAAGGGACTTCAATCCTTGAGACCCGGGTCAGCCAATaGCTTCCTGTGTCCACACCT | + |
|
Preference number: 4 (lower is better) Translates to: ARLELKLICLSKGTSILETRVSQ*LPVSTP Trigger: AGGTGTGGACACAGGAAGGCATTGGCTGACCCGGGT...CTCAAGGATTGAAGTCCCTTTACTCAGGCAAATAAGTTTTAGCTCCAGCCGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026154.9 |
||
| CDS-3UTR CCA 90 bp | TTCATGGTCATGGATTCCAGGAAAAGCTGCCCTTGGAAGCTCTTGAGAGACAATATTCCTGCCCTGGGGTaGGTATCCAGGAGGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FMVMDSRKSCPWKLLRDNIPALG*VSRRSG Trigger: ACCACTCCTCCTGGATACCCACCCCAGGGCAGGAAT...ATTGTCTCTCAAGAGCTTCCAAGGGCAGCTTTTCCTGGAATCCATGACCATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
||
| CDS-3UTR GCA 90 bp | TTCATGGTCATGGATTCCAGGAAAAGCTGCCCTTGGAAGCTCTTGAGAGACAATAGCGCAGGCAAACCTTaGCATAACGCCAGCGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FMVMDSRKSCPWKLLRDNSAGKP*HNASAV Trigger: TACAGCGCTGGCGTTATGGCAAGGTTTGCCTGCGCT...ATTGTCTCTCAAGAGCTTCCAAGGGCAGCTTTTCCTGGAATCCATGACCATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
||
| CDS-3UTR CCA 90 bp | CACCTTCCAGTTGTCCAAGCAGCCATAGTTGTAAGGATTCCTAAACACCCTGCCGTGGTGTGTTCGGGCTaGCTTGGGATAAATGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: HLPVVQAAIVVRIPKHPAVVCSG*LGINAL Trigger: AAGTGCATTTATCCCAAGCCAGCCCGAACACACCAC...GGCAGGGTGTTTAGGAATCCTTACAACTATGGCTGCTTGGACAACTGGAAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
||
| CDS-3UTR TCA 90 bp | AGCCTGATGGCTCTTCATGGTCATGGATTCCAGGAAAAGCTGCCCTTGGAAGCTAGTAATGGAAGACGATaGGGATCAGATTCCAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLMALHGHGFQEKLPLEASNGRR*GSDSSD Trigger: GTCACTGGAATCTGATCCTCATCGTCTTCCATTACT...AGCTTCCAAGGGCAGCTTTTCCTGGAATCCATGACCATGAAGAGCCATCAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
||
| CDS-3UTR TCA 90 bp | GCTCGGCTGGAGCTAAAACTTATTTGCCTGAGTAAAGGGACTTCAATCCTTGAGATCCAGGAGGAGTGGTaGTGGCCTGGTAGTAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: ARLELKLICLSKGTSILEIQEEW*WPGSNG Trigger: TCCATTACTACCAGGCCATCACCACTCCTCCTGGAT...CTCAAGGATTGAAGTCCCTTTACTCAGGCAAATAAGTTTTAGCTCCAGCCGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
||
| CDS-3UTR GCA 90 bp | CACCTTCCAGTTGTCCAAGCAGCCATAGTTGTAAGGATTCCTAAACACCCTGCCCTAGGACCAGCATCCTaGTATTACAGATGCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLPVVQAAIVVRIPKHPALGPAS*YYRCCS Trigger: ACTGCAGCATCTGTAATAGCAGGATGCTGGTCCTAG...GGCAGGGTGTTTAGGAATCCTTACAACTATGGCTGCTTGGACAACTGGAAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGGAAAAGCTGCCCTTGGAAGCTCTTGAGAGACAATAAACATCAAATAGTGATGCCAGCAGAGCCGTaGTACCGAGTAGGTTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRKSCPWKLLRDNKHQIVMPAEP*YRVGSE Trigger: CTCCGAACCTACTCGGTACCACGGCTCTGCTGGCAT...CACTATTTGATGTTTATTGTCTCTCAAGAGCTTCCAAGGGCAGCTTTTCCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGGAAAAGCTGCCCTTGGAAGCTCTTGAGAGACAATAAACATCAAATAGTGATTCCTGCCCTGGGGTaGGTATCCAGGAGGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRKSCPWKLLRDNKHQIVIPALG*VSRRSG Trigger: ACCACTCCTCCTGGATACCCACCCCAGGGCAGGAAT...CACTATTTGATGTTTATTGTCTCTCAAGAGCTTCCAAGGGCAGCTTTTCCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTCTTCATGGTCATGGATTCCAGGAAAAGCTGCCCTTGGAAGCTCTTGAGAGTGTTCGGGCTGGCTTaGGATAAATGCACTTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: WLFMVMDSRKSCPWKLLRVFGLA*DKCTSY Trigger: GTAAGAAGTGCATTTATCCCAAGCCAGCCCGAACAC...TCTCAAGAGCTTCCAAGGGCAGCTTTTCCTGGAATCCATGACCATGAAGAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
||
| CDS-3UTR TCA 90 bp | CGGCTGGAGCTAAAACTTATTTGCCTGAGTAAAGGGACTTCAATCCTTGAGTTTAGTAGGTTCGGAGGATaGGGGGCAGGACACACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RLELKLICLSKGTSILEFSRFGG*GAGHTD Trigger: ATCTGTGTGTCCTGCCCCTCATCCTCCGAACCTACT...AAACTCAAGGATTGAAGTCCCTTTACTCAGGCAAATAAGTTTTAGCTCCAGCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
||
| CDS-3UTR GCA 90 bp | GCTCGGCTGGAGCTAAAACTTATTTGCCTGAGTAAAGGGACTTCAATCCTTGAGCACACCTATTACAGATaGTGCAGTGGTGTGTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: ARLELKLICLSKGTSILEHTYYR*CSGVFG Trigger: CCCGAACACACCACTGCAGCATCTGTAATAGGTGTG...CTCAAGGATTGAAGTCCCTTTACTCAGGCAAATAAGTTTTAGCTCCAGCCGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026154.9 |
||
| CDS-3UTR GCA 90 bp | TTCATGGTCATGGATTCCAGGAAAAGCTGCCCTTGGAAGCTCTTGAGAGACAATTCCTGCTATTACAGATaGTGCAGTGGTGTGTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FMVMDSRKSCPWKLLRDNSCYYR*CSGVFG Trigger: CCCGAACACACCACTGCAGCATCTGTAATAGCAGGA...ATTGTCTCTCAAGAGCTTCCAAGGGCAGCTTTTCCTGGAATCCATGACCATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
||
| CDS-3UTR CCA 90 bp | AGTTTCTCCACACTGCATCTTGTTTTTAGGTGGCAGAAGATTGGTCTTGATTGTGAACAGCATGCCACATaGTTAGGGCACCCAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFSTLHLVFRWQKIGLDCEQHAT*LGHPGP Trigger: TGGCCCTGGGTGCCCTAACCATGTGGCATGCTGTTC...ACAATCAAGACCAATCTTCTGCCACCTAAAAACAAGATGCAGTGTGGAGAAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026154.9 |
||
| CDS-3UTR GCA 90 bp | AGTTTCTCCACACTGCATCTTGTTTTTAGGTGGCAGAAGATTGGTCTTGATTGTAGCGCAGGCAAACCTTaGCATAACGCCAGCGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SFSTLHLVFRWQKIGLDCSAGKP*HNASAV Trigger: TACAGCGCTGGCGTTATGGCAAGGTTTGCCTGCGCT...ACAATCAAGACCAATCTTCTGCCACCTAAAAACAAGATGCAGTGTGGAGAAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTAAAACTTATTTGCCTGAGTAAAGGGACTTCAATCCTTGAGTTTCTCCACATGTCATTCCTGCCCTaGGGTGGGTATCCAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ELKLICLSKGTSILEFLHMSFLP*GGYPGG Trigger: TCCTCCTGGATACCCACCCCAGGGCAGGAATGACAT...GTGGAGAAACTCAAGGATTGAAGTCCCTTTACTCAGGCAAATAAGTTTTAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
||
| CDS-3UTR CCA 90 bp | ATGGTCATGGATTCCAGGAAAAGCTGCCCTTGGAAGCTCTTGAGAGACAATAAAAAAGGAGAAGGTAGGTaGTGGAGTCTGGTGGTACGT | + |
|
Preference number: 4 (lower is better) Translates to: MVMDSRKSCPWKLLRDNKKGEGR*WSLVVR Trigger: ACGTACCACCAGACTCCACCACCTACCTTCTCCTTT...TTTATTGTCTCTCAAGAGCTTCCAAGGGCAGCTTTTCCTGGAATCCATGACCAT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026154.9 |
||
| 3UTR CAA 72 bp | AGTGACCTTGGCAATAGGCTTACTGTCTTTGTCCCGTaGAGAAGCCAGAGTTTCAACATACCTGATGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: SDLGNRLTVFVP*RSQSFNIPDGS Trigger: AGATCCATCAGGTATGTTGAAACTCTGGCTTCTCAACGGGACAAAGACAGTAAGCCTATTGCCAAGGTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
||
| 3UTR CAA 72 bp | GTCTGGTGGTACGTCTGGTTGGCAATCGCCTGTAGTTaGTTCTTGTCAAGCTGTTTCATTTTCTCAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VWWYVWLAIACS*FLSSCFIFSMA Trigger: TGCCATTGAGAAAATGAAACAGCTTGACAAGAACAAACTACAGGCGATTGCCAACCAGACGTACCACCAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAGAGTTTCAACATACCTGATGGATCTTTTCCCAAAGTGAAAGAAAGAGATCTGATGAGAACAGCATaGCACATGGTTAGGGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: SQSFNIPDGSFPKVKERDLMRTA*HMVRAP Trigger: GGGTGCCCTAACCATGTGGCATGCTGTTCTCATCAG...ATCTCTTTCTTTCACTTTGGGAAAAGATCCATCAGGTATGTTGAAACTCTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026154.9 |
||
| CDS-3UTR GCA 90 bp | AGTTTCTCCACACTGCATCTTGTTTTTAGGTGGCAGAAGATTGGTCTTGATTGTTGCTATTACAGATGCTaGAGTGGTGTGTTCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SFSTLHLVFRWQKIGLDCCYYRC*SGVFGL Trigger: CAGCCCGAACACACCACTGCAGCATCTGTAATAGCA...ACAATCAAGACCAATCTTCTGCCACCTAAAAACAAGATGCAGTGTGGAGAAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| CDS-3UTR CCA 90 bp | GAGCTAAAACTTATTTGCCTGAGTAAAGGGACTTCAATCCTTGAGTTTCTCCACGTGGTGTGTTCGGGCTaGCTTGGGATAAATGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: ELKLICLSKGTSILEFLHVVCSG*LGINAL Trigger: AAGTGCATTTATCCCAAGCCAGCCCGAACACACCAC...GTGGAGAAACTCAAGGATTGAAGTCCCTTTACTCAGGCAAATAAGTTTTAGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
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| CDS-3UTR GCA 90 bp | TGCCCTTGGAAGCTCTTGAGAGACAATAAACATCAAATAGTGTTCAAGTTGTGGCAACGGCAGTGTCACTaGCTCCAAAGGAATTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CPWKLLRDNKHQIVFKLWQRQCH*LQRNCR Trigger: TCTACAATTCCTTTGGAGGCAGTGACACTGCCGTTG...CCACAACTTGAACACTATTTGATGTTTATTGTCTCTCAAGAGCTTCCAAGGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAGAGTTTCAACATACCTGATGGATCTTTTCCCAAAGTGAAAGAAAGAGATACCTATTACAGATGCTaGAGTGGTGTGTTCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQSFNIPDGSFPKVKERDTYYRC*SGVFGL Trigger: CAGCCCGAACACACCACTGCAGCATCTGTAATAGGT...ATCTCTTTCTTTCACTTTGGGAAAAGATCCATCAGGTATGTTGAAACTCTGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026154.9 |
||
| CDS-3UTR CCA 90 bp | GAGCTAAAACTTATTTGCCTGAGTAAAGGGACTTCAATCCTTGAGTTTCTCCACGTGTTCGGGCTGGCTTaGGATAAATGCACTTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ELKLICLSKGTSILEFLHVFGLA*DKCTSY Trigger: GTAAGAAGTGCATTTATCCCAAGCCAGCCCGAACAC...GTGGAGAAACTCAAGGATTGAAGTCCCTTTACTCAGGCAAATAAGTTTTAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
||
| 3UTR CAA 72 bp | GTCATGGATTCCAGGAAAAGCTGCCCTTGGAAGCTCTaGAGAGACAATAAACATCAAATAGTGTTCAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VMDSRKSCPWKL*RDNKHQIVFKL Trigger: CAACTTGAACACTATTTGATGTTTATTGTCTCTCAAGAGCTTCCAAGGGCAGCTTTTCCTGGAATCCATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000225968.2 |
||
| CDS-3UTR GCA 90 bp | GAGCTAAAACTTATTTGCCTGAGTAAAGGGACTTCAATCCTTGAGTTTCTCCACTCCTTCTTGTTGATATaGCTTTCGATGCTAGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ELKLICLSKGTSILEFLHSFLLI*LSMLVS Trigger: TGAGACTAGCATCGAAAGGCATATCAACAAGAAGGA...GTGGAGAAACTCAAGGATTGAAGTCCCTTTACTCAGGCAAATAAGTTTTAGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026154.9 |
||
| CDS CCA 90 bp | AACCTTGCCATAACGCCAGCGCTGTACCAGGCCCCGGAGCAGAGGTaGGCATCGACGCCGGTAGCCCAGGAGCAAAAGGAGGCGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: NLAITPALYQAPEQR*ASTPVAQEQKEAQA Trigger: TGCCTGCGCCTCCTTTTGCTCCTGGGCTACCGGCGTCGATGCCCACCTCTGCTCCGGGGCCTGGTACAGCGCTGGCGTTATGGCAAGGTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026154.9 ENSMUST00000224258.2 ENSMUST00000224562.2 ENSMUST00000224896.2 |
||
| CDS TCA 90 bp | AGAAGAAATGCCAGCAGAGCCGTGGTACCGAGTAGGTTCGGAGGATaGGGGGCAGGACACACAGATAAGCAATGGCCACGATGGACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RRNASRAVVPSRFGG*GAGHTDKQWPRWTR Trigger: CCGGGTCCATCGTGGCCATTGCTTATCTGTGTGTCCTGCCCCTCATCCTCCGAACCTACTCGGTACCACGGCTCTGCTGGCATTTCTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026154.9 ENSMUST00000224562.2 ENSMUST00000225968.2 |
||
| CDS GCA 90 bp | CCAGCCAGTAGACAGGCTCAAAGGCAGCATCAACGGCAGTGTCACTaGCTCCAAAGGAATTGTAGAGCAGGGAGCGCAGGCAAACCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PASRQAQRQHQRQCH*LQRNCRAGSAGKPC Trigger: GCAAGGTTTGCCTGCGCTCCCTGCTCTACAATTCCTTTGGAGGCAGTGACACTGCCGTTGATGCTGCCTTTGAGCCTGTCTACTGGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026154.9 ENSMUST00000224258.2 ENSMUST00000224562.2 ENSMUST00000224896.2 ENSMUST00000225968.2 |
||
| CDS-3UTR CAA 90 bp | TCTAAGGCAAGCCTGATGGCTCTTCATGGTCATGGATTCCAGGAAAAGCTGCCCCGGCGCCTCTCCTTCTaGTTGATATGCCTTTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: SKASLMALHGHGFQEKLPRRLSF*LICLSM Trigger: CATCGAAAGGCATATCAACAAGAAGGAGAGGCGCCG...GGGCAGCTTTTCCTGGAATCCATGACCATGAAGAGCCATCAGGCTTGCCTTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026154.9 |
||
| CDS CCA 90 bp | GACAAGACTCTTGTGAGTTATCCTTTCTCGAAAGGAGAAGGTAGGTaGTGGAGTCTGGTGGTACGTCTCAATGGCAGCATAAGCCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: DKTLVSYPFSKGEGR*WSLVVRLNGSISLP Trigger: CGGGAGGCTTATGCTGCCATTGAGACGTACCACCAGACTCCACCACCTACCTTCTCCTTTCGAGAAAGGATAACTCACAAGAGTCTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026154.9 |
||
| CDS GCA 90 bp | GACAATCCTTTCCTACTAGGACCAGCATCCTGCTATTACAGATGCTaGAGTGGTGTGTTCGGGCTGGCTTGGGATAAATGCACTTCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: DNPFLLGPASCYYRC*SGVFGLAWDKCTSY Trigger: GTAAGAAGTGCATTTATCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGTAATAGCAGGATGCTGGTCCTAGTAGGAAAGGATTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
||
| CDS GCA 90 bp | AGTGACAATCCTTTCCTACTAGGACCAGCATCCTGCTATTACAGATaGTGCAGTGGTGTGTTCGGGCTGGCTTGGGATAAATGCACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SDNPFLLGPASCYYR*CSGVFGLAWDKCTS Trigger: AGAAGTGCATTTATCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGTAATAGCAGGATGCTGGTCCTAGTAGGAAAGGATTGTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
||
| CDS CCA 90 bp | GACCAGCATCCTGCTATTACAGATGCTGCAGTGGTGTGTTCGGGCTaGCTTGGGATAAATGCACTTCTTACAGATGGAGACAGTAGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: DQHPAITDAAVVCSG*LGINALLTDGDSSN Trigger: ATTGCTACTGTCTCCATCTGTAAGAAGTGCATTTATCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGTAATAGCAGGATGCTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
||
| CDS CCA 90 bp | CTTCAGCACACACCTATTACAGATGCTGCAGTGGTGTGTTCGGGCTaGCTTGGGATAAATGCACTTCTTACAGATGGAGACAGTAGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LQHTPITDAAVVCSG*LGINALLTDGDSSN Trigger: ATTGCTACTGTCTCCATCTGTAAGAAGTGCATTTATCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGTAATAGGTGTGTGCTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000224537.2 |
||
| CDS CCA 90 bp | CCAACTTCCATAGCTATTACAGATGCTGCAGTGGTGTGTTCGGGCTaGCTTGGGATAAATGCACTTCTTACAGATGGAGACAGTAGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: PTSIAITDAAVVCSG*LGINALLTDGDSSN Trigger: ATTGCTACTGTCTCCATCTGTAAGAAGTGCATTTATCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGTAATAGCTATGGAAGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224562.2 |
||
| CDS-3UTR CAA 90 bp | ATGGTCATGGATTCCAGGAAAAGCTGCCCTTGGAAGCTCTTGAGAGACAATAAACGCCTCTCCTTCTTGTaGATATGCCTTTCGATGCTA | + |
|
Preference number: 5 (lower is better) Translates to: MVMDSRKSCPWKLLRDNKRLSFL*ICLSML Trigger: TAGCATCGAAAGGCATATCAACAAGAAGGAGAGGCG...TTTATTGTCTCTCAAGAGCTTCCAAGGGCAGCTTTTCCTGGAATCCATGACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026154.9 |
||
| CDS CCA 72 bp | ATAACGCCAGCGCTGTACCAGGCCCCGGAGCAGAGGTaGGCATCGACGCCGGTAGCCCAGGAGCAAAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ITPALYQAPEQR*ASTPVAQEQKE Trigger: CTCCTTTTGCTCCTGGGCTACCGGCGTCGATGCCCACCTCTGCTCCGGGGCCTGGTACAGCGCTGGCGTTAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000026154.9 ENSMUST00000224258.2 ENSMUST00000224562.2 ENSMUST00000224896.2 |
||
| CDS TCA 72 bp | GCCAGCAGAGCCGTGGTACCGAGTAGGTTCGGAGGATaGGGGGCAGGACACACAGATAAGCAATGGCCACGA | + |
|
Preference number: 6 (lower is better) Translates to: ASRAVVPSRFGG*GAGHTDKQWPR Trigger: TCGTGGCCATTGCTTATCTGTGTGTCCTGCCCCTCATCCTCCGAACCTACTCGGTACCACGGCTCTGCTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026154.9 ENSMUST00000224562.2 ENSMUST00000225968.2 |
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| CDS GCA 72 bp | CAAAGGAATTGTAGAGCAGGGAGCGCAGGCAAACCTTaGCATAACGCCAGCGCTGTACCAGGCCCCGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: QRNCRAGSAGKP*HNASAVPGPGA Trigger: TGCTCCGGGGCCTGGTACAGCGCTGGCGTTATGGCAAGGTTTGCCTGCGCTCCCTGCTCTACAATTCCTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026154.9 ENSMUST00000224258.2 ENSMUST00000224562.2 ENSMUST00000224896.2 ENSMUST00000225968.2 |
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| CDS CCA 72 bp | GCAGACTCCGGTGGCACTAAGCAGTCTCTGCTTCTGTaGACAGACCACTTTCCCTGCTGTGGACAGGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: ADSGGTKQSLLL*TDHFPCCGQAA Trigger: AGCGGCCTGTCCACAGCAGGGAAAGTGGTCTGTCCACAGAAGCAGAGACTGCTTAGTGCCACCGGAGTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223802.2 |
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| CDS GCA 72 bp | AGACAGGCTCAAAGGCAGCATCAACGGCAGTGTCACTaGCTCCAAAGGAATTGTAGAGCAGGGAGCGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: RQAQRQHQRQCH*LQRNCRAGSAG Trigger: GCCTGCGCTCCCTGCTCTACAATTCCTTTGGAGGCAGTGACACTGCCGTTGATGCTGCCTTTGAGCCTGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026154.9 ENSMUST00000224258.2 ENSMUST00000224562.2 ENSMUST00000224896.2 ENSMUST00000225968.2 |
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| CDS GCA 72 bp | AAGCAGTCTCTGCTTCTGTGGACAGACCACTTTCCCTaGTGTGGACAGGCCGCTTTCCCTTCCTGTGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: KQSLLLWTDHFP*CGQAAFPSCVH Trigger: GTGGACACAGGAAGGGAAAGCGGCCTGTCCACAGCAGGGAAAGTGGTCTGTCCACAGAAGCAGAGACTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223802.2 |
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| CDS GCA 72 bp | TTCCTACTAGGACCAGCATCCTGCTATTACAGATGCTaGAGTGGTGTGTTCGGGCTGGCTTGGGATAAATGC | + |
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Preference number: 6 (lower is better) Translates to: FLLGPASCYYRC*SGVFGLAWDKC Trigger: GCATTTATCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGTAATAGCAGGATGCTGGTCCTAGTAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| CDS GCA 72 bp | GATGATCCATCTTCAGCACACACCTATTACAGATGCTaGAGTGGTGTGTTCGGGCTGGCTTGGGATAAATGC | + |
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Preference number: 6 (lower is better) Translates to: DDPSSAHTYYRC*SGVFGLAWDKC Trigger: GCATTTATCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGTAATAGGTGTGTGCTGAAGATGGATCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000224537.2 |
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| CDS CCA 72 bp | CCTGCTATTACAGATGCTGCAGTGGTGTGTTCGGGCTaGCTTGGGATAAATGCACTTCTTACAGATGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: PAITDAAVVCSG*LGINALLTDGD Trigger: GTCTCCATCTGTAAGAAGTGCATTTATCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGTAATAGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225968.2 |
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| CDS CCA 72 bp | ACACCTATTACAGATGCTGCAGTGGTGTGTTCGGGCTaGCTTGGGATAAATGCACTTCTTACAGATGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: TPITDAAVVCSG*LGINALLTDGD Trigger: GTCTCCATCTGTAAGAAGTGCATTTATCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGTAATAGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026154.9 ENSMUST00000224537.2 |
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| CDS CCA 72 bp | CTTGTGAGTTATCCTTTCTCGAAAGGAGAAGGTAGGTaGTGGAGTCTGGTGGTACGTCTCAATGGCAGCATA | + |
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Preference number: 6 (lower is better) Translates to: LVSYPFSKGEGR*WSLVVRLNGSI Trigger: TATGCTGCCATTGAGACGTACCACCAGACTCCACCACCTACCTTCTCCTTTCGAGAAAGGATAACTCACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026154.9 |
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| CDS CCA 72 bp | ATAGCTATTACAGATGCTGCAGTGGTGTGTTCGGGCTaGCTTGGGATAAATGCACTTCTTACAGATGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: IAITDAAVVCSG*LGINALLTDGD Trigger: GTCTCCATCTGTAAGAAGTGCATTTATCCCAAGCCAGCCCGAACACACCACTGCAGCATCTGTAATAGCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224562.2 |
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