Pregenerated sensors for ZDHHC15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033906Ensembl transcript IDs: ENSMUST00000042070.6
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCAAGCTGGCCTGGAGCTCATATGGAGAGCAACCAGGGTGGTCTTaGAGTGATCCCCCTCCTCTGCATCCCAGGAGCTGGGACAGGCAT | + |
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Preference number: 1 (lower is better) Translates to: PKLAWSSYGEQPGWS*SDPPPLHPRSWDRH Trigger: ATGCCTGTCCCAGCTCCTGGGATGCAGAGGAGGGGGATCACTGCAAGACCACCCTGGTTGCTCTCCATATGAGCTCCAGGCCAGCTTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR GCA 90 bp | CATATGGAGAGCAACCAGGGTGGTCTTGCAGTGATCCCCCTCCTCTaGATCCCAGGAGCTGGGACAGGCATTCACTATTATACCTGGTCT | + |
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Preference number: 1 (lower is better) Translates to: HMESNQGGLAVIPLL*IPGAGTGIHYYTWS Trigger: AGACCAGGTATAATAGTGAATGCCTGTCCCAGCTCCTGGGATGCAGAGGAGGGGGATCACTGCAAGACCACCCTGGTTGCTCTCCATATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR TCA 90 bp | GAACACCCGAACTGTGACACTAGCAGTCCAAACGGTGGCTTAGTTTaGGGATTAGAGTTGTTCCCAATATTGAAATCTGTAAGCCTCACG | + |
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Preference number: 1 (lower is better) Translates to: EHPNCDTSSPNGGLV*GLELFPILKSVSLT Trigger: CGTGAGGCTTACAGATTTCAATATTGGGAACAACTCTAATCCTCAAACTAAGCCACCGTTTGGACTGCTAGTGTCACAGTTCGGGTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR TCA 90 bp | CGCATGTTGATGAACATGTTGATGAGAGTTGAAAGACATAGAGTGTaGATGGTTATGACATTCCTGTCATTTGGGGCCTTGTTAAATCTC | + |
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Preference number: 1 (lower is better) Translates to: RMLMNMLMRVERHRV*MVMTFLSFGALLNL Trigger: GAGATTTAACAAGGCCCCAAATGACAGGAATGTCATAACCATTCACACTCTATGTCTTTCAACTCTCATCAACATGTTCATCAACATGCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR CCA 90 bp | GGGTTTCTTCTTTCTCCAAGCATCCAGAGAAAATCCTGGTTTATTTaGCCTTTTGGAAACAGCATAAGTCTTAAGACACTGAACAATCAG | + |
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Preference number: 1 (lower is better) Translates to: GFLLSPSIQRKSWFI*PFGNSISLKTLNNQ Trigger: CTGATTGTTCAGTGTCTTAAGACTTATGCTGTTTCCAAAAGGCCAAATAAACCAGGATTTTCTCTGGATGCTTGGAGAAAGAAGAAACCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR CCA 90 bp | CTTTATAGAAAGGTACATTTGTATAGGACTAAAAGGCAAGGTCTGTaGGCCATAAAGCCACATAGATGGCTAAATATGCTTCCAAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: LYRKVHLYRTKRQGL*AIKPHRWLNMLPRK Trigger: TTTCCTTGGAAGCATATTTAGCCATCTATGTGGCTTTATGGCCCACAGACCTTGCCTTTTAGTCCTATACAAATGTACCTTTCTATAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR CCA 90 bp | ACAAGAATAGGGTTTCTTCTTTCTCCAAGCATCCAGAGAAAATCCTaGTTTATTTGGCCTTTTGGAAACAGCATAAGTCTTAAGACACTG | + |
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Preference number: 1 (lower is better) Translates to: TRIGFLLSPSIQRKS*FIWPFGNSISLKTL Trigger: CAGTGTCTTAAGACTTATGCTGTTTCCAAAAGGCCAAATAAACCAGGATTTTCTCTGGATGCTTGGAGAAAGAAGAAACCCTATTCTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR CCA 90 bp | AAGTTCCAATGCCTTCCAGACTTTACAGCCCAGACAGCAGCTTCTGTACTGTCCGCAGAAGACGATAGGTaGGGTCAGGGAAGGCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: KFQCLPDFTAQTAASVLSAEDDR*GQGRLL Trigger: AAGCAGCCTTCCCTGACCCCACCTATCGTCTTCTGC...GGACAGTACAGAAGCTGCTGTCTGGGCTGTAAAGTCTGGAAGGCATTGGAACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR GCA 90 bp | AAGTTCCAATGCCTTCCAGACTTTACAGCCCAGACAGCAGCTTCTGTACTGTCCGTTTTCCTTCTCAGTTaGACTGGAACCCCAACACAG | + |
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Preference number: 2 (lower is better) Translates to: KFQCLPDFTAQTAASVLSVFLLS*TGTPTQ Trigger: CTGTGTTGGGGTTCCAGTGCAACTGAGAAGGAAAAC...GGACAGTACAGAAGCTGCTGTCTGGGCTGTAAAGTCTGGAAGGCATTGGAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR CAA 90 bp | CTTGAAGCAATTGTTTCCGATTGGAGTTCATTCAGCCAAGTAAAGTaGCCAAGTCTGGAAAGATCTGCACAGGGGTGCAATGGAACACCC | + |
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Preference number: 2 (lower is better) Translates to: LEAIVSDWSSFSQVK*PSLERSAQGCNGTP Trigger: GGGTGTTCCATTGCACCCCTGTGCAGATCTTTCCAGACTTGGCAACTTTACTTGGCTGAATGAACTCCAATCGGAAACAATTGCTTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR GCA 90 bp | AAGTTCCAATGCCTTCCAGACTTTACAGCCCAGACAGCAGCTTCTGTACTGTCCCTGCACATTAACTCCTaGTGTGAAAACACAGACCTT | + |
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Preference number: 2 (lower is better) Translates to: KFQCLPDFTAQTAASVLSLHINS*CENTDL Trigger: AAGGTCTGTGTTTTCACAGCAGGAGTTAATGTGCAG...GGACAGTACAGAAGCTGCTGTCTGGGCTGTAAAGTCTGGAAGGCATTGGAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR CCA 90 bp | TTGTTTTCCTTCTCAGTTGCACTGGAACCCCAACACAGATTTGTTTGTACCAGGCTGCATCCCAGGAGCTaGGACAGGCATTCACTATTA | + |
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Preference number: 2 (lower is better) Translates to: LFSFSVALEPQHRFVCTRLHPRS*DRHSLL Trigger: TAATAGTGAATGCCTGTCCCAGCTCCTGGGATGCAG...CCTGGTACAAACAAATCTGTGTTGGGGTTCCAGTGCAACTGAGAAGGAAAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR TCA 90 bp | ACTTCAAGATGTTGGAGAGAGAGGGACTCTTGGAATGGGATTCTGTTCTCTTTGCAGCTTGTATTAACCTaGGCTTTACCCTTCCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: TSRCWRERDSWNGILFSLQLVLT*ALPFQC Trigger: GCACTGGAAGGGTAAAGCTCAGGTTAATACAAGCTG...CAAAGAGAACAGAATCCCATTCCAAGAGTCCCTCTCTCTCCAACATCTTGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR CCA 90 bp | ACTTCAAGATGTTGGAGAGAGAGGGACTCTTGGAATGGGATTCTGTTCTCTTTGTTATGTAACCCAAGCTaGCCTGGAGCTCATATGGAG | + |
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Preference number: 2 (lower is better) Translates to: TSRCWRERDSWNGILFSLLCNPS*PGAHME Trigger: CTCCATATGAGCTCCAGGCCAGCTTGGGTTACATAA...CAAAGAGAACAGAATCCCATTCCAAGAGTCCCTCTCTCTCCAACATCTTGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGAAGTTCCAATGCCTTCCAGACTTTACAGCCCAGACAGCAGCTTCTGTAATCTCCGTTAAGAGTTaGGGCTTTTATTGTCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: TEKFQCLPDFTAQTAASVISVKS*GFYCQQ Trigger: CTGCTGACAATAAAAGCCCCAACTCTTAACGGAGAT...TACAGAAGCTGCTGTCTGGGCTGTAAAGTCTGGAAGGCATTGGAACTTCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR TCA 90 bp | CCGTTAAGAGTTGGGGCTTTTATTGTCAGCAGCTGTGCATTAGAGTGCTGGTTGTCTAAGGCAATCTTCTaGATTCCCTTTTACCAGACT | + |
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Preference number: 2 (lower is better) Translates to: PLRVGAFIVSSCALECWLSKAIF*IPFYQT Trigger: AGTCTGGTAAAAGGGAATTCAGAAGATTGCCTTAGA...CAACCAGCACTCTAATGCACAGCTGCTGACAATAAAAGCCCCAACTCTTAACGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR TCA 90 bp | CCGTTAAGAGTTGGGGCTTTTATTGTCAGCAGCTGTGCATTAGAGTGCTGGTTGTTTCAGAAACTTCTGTaGCAGGACAGATTTTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: PLRVGAFIVSSCALECWLFQKLL*QDRFCL Trigger: AAGGCAAAATCTGTCCTGTCACAGAAGTTTCTGAAA...CAACCAGCACTCTAATGCACAGCTGCTGACAATAAAAGCCCCAACTCTTAACGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR TCA 90 bp | GAATACCTACACTTTGTGCAATTTGGCATGAACATGAGGAAGCACATTGTTTTCGATGCTGGTTTCTTCTaGAGTGCTGCTTGCACCCCT | + |
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Preference number: 2 (lower is better) Translates to: EYLHFVQFGMNMRKHIVFDAGFF*SAACTP Trigger: AGGGGTGCAAGCAGCACTTCAGAAGAAACCAGCATC...GAAAACAATGTGCTTCCTCATGTTCATGCCAAATTGCACAAAGTGTAGGTATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR GCA 90 bp | AAGTTCCAATGCCTTCCAGACTTTACAGCCCAGACAGCAGCTTCTGTACTGTCCAGCTGTGCATTAGAGTaGTGGTTGAAAAATGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: KFQCLPDFTAQTAASVLSSCALE*WLKNEN Trigger: GTTTTCATTTTTCAACCAGCACTCTAATGCACAGCT...GGACAGTACAGAAGCTGCTGTCTGGGCTGTAAAGTCTGGAAGGCATTGGAACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR CAA 90 bp | GGGGAAGAGGCACATATTGCATTAGAAAACAAAGAGCTGTCTAAATaGCAAACTTCAAGATGTTGGAGAGAGAGGGACTCTTGGAATGGG | + |
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Preference number: 2 (lower is better) Translates to: GEEAHIALENKELSK*QTSRCWRERDSWNG Trigger: CCCATTCCAAGAGTCCCTCTCTCTCCAACATCTTGAAGTTTGCAATTTAGACAGCTCTTTGTTTTCTAATGCAATATGTGCCTCTTCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGAAGTTCCAATGCCTTCCAGACTTTACAGCCCAGACAGCAGCTTCTGTACTTCAGAAGGAGCAATaGAAAGGCAATTATTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: TEKFQCLPDFTAQTAASVLQKEQ*KGNYFP Trigger: AGGAAAATAATTGCCTTTCCATTGCTCCTTCTGAAG...TACAGAAGCTGCTGTCTGGGCTGTAAAGTCTGGAAGGCATTGGAACTTCTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR CCA 90 bp | ATTCCAGCACTAGAAAGTAAAGTCTCTCTAATAATATCTGTGTGTTTTGGGATGTGCACAGGGGTGCAATaGAACACCCGAACTGTGACA | + |
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Preference number: 2 (lower is better) Translates to: IPALESKVSLIISVCFGMCTGVQ*NTRTVT Trigger: TGTCACAGTTCGGGTGTTCCATTGCACCCCTGTGCA...CATCCCAAAACACACAGATATTATTAGAGAGACTTTACTTTCTAGTGCTGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR CCA 90 bp | CCGTTAAGAGTTGGGGCTTTTATTGTCAGCAGCTGTGCATTAGAGTGCTGGTTGCTGGTTATAAATAAGTaGGGAAATGGATGTAAACTC | + |
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Preference number: 2 (lower is better) Translates to: PLRVGAFIVSSCALECWLLVINK*GNGCKL Trigger: GAGTTTACATCCATTTCCCCACTTATTTATAACCAG...CAACCAGCACTCTAATGCACAGCTGCTGACAATAAAAGCCCCAACTCTTAACGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR CCA 90 bp | ACTTCAAGATGTTGGAGAGAGAGGGACTCTTGGAATGGGATTCTGTTCTCTTTGCATGGAGGAAAAGAATaGAGCACATTTGTTTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: TSRCWRERDSWNGILFSLHGGKE*STFVCS Trigger: TGAGCAAACAAATGTGCTCCATTCTTTTCCTCCATG...CAAAGAGAACAGAATCCCATTCCAAGAGTCCCTCTCTCTCCAACATCTTGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR CAA 90 bp | AATGATCCCTGTGAAATGTTTGTTCTAAAGACCTATCAATCTGCCTaGAAAGAAGGGCGTGCATTCATGTCTATGTGCACGCATGTTGAT | + |
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Preference number: 2 (lower is better) Translates to: NDPCEMFVLKTYQSA*KEGRAFMSMCTHVD Trigger: ATCAACATGCGTGCACATAGACATGAATGCACGCCCTTCTTTCAAGGCAGATTGATAGGTCTTTAGAACAAACATTTCACAGGGATCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR TCA 90 bp | ATTCCAGCACTAGAAAGTAAAGTCTCTCTAATAATATCTGTGTGTTTTGGGATGTCACCCTTGTTAAAATaGCCCAGGGGGACCAAATGG | + |
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Preference number: 2 (lower is better) Translates to: IPALESKVSLIISVCFGMSPLLK*PRGTKW Trigger: CCATTTGGTCCCCCTGGGTCATTTTAACAAGGGTGA...CATCCCAAAACACACAGATATTATTAGAGAGACTTTACTTTCTAGTGCTGGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR GCA 90 bp | GAATACCTACACTTTGTGCAATTTGGCATGAACATGAGGAAGCACATTGTTTTCCCCATGAACATAAGCTaGAAATACATGCTGACTCCC | + |
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Preference number: 2 (lower is better) Translates to: EYLHFVQFGMNMRKHIVFPMNIS*KYMLTP Trigger: GGGAGTCAGCATGTATTTGCAGCTTATGTTCATGGG...GAAAACAATGTGCTTCCTCATGTTCATGCCAAATTGCACAAAGTGTAGGTATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR CCA 90 bp | CTATCTTTTTCCAAGGACATCGTTGCAGCAAACGGAAGAACATTAACAAAGTACAAAAGGCAAGGTCTGTaGGCCATAAAGCCACATAGA | + |
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Preference number: 2 (lower is better) Translates to: LSFSKDIVAANGRTLTKYKRQGL*AIKPHR Trigger: TCTATGTGGCTTTATGGCCCACAGACCTTGCCTTTT...GTACTTTGTTAATGTTCTTCCGTTTGCTGCAACGATGTCCTTGGAAAAAGATAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR CCA 90 bp | CTCATTCTGCTGATGGATGTTAACCAGACTTCTCCAAAGAACACATTTAATGGTCAAACTTCAAGATGTTaGAGAGAGAGGGACTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: LILLMDVNQTSPKNTFNGQTSRC*RERDSW Trigger: CCAAGAGTCCCTCTCTCTCCAACATCTTGAAGTTTG...ACCATTAAATGTGTTCTTTGGAGAAGTCTGGTTAACATCCATCAGCAGAATGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR TCA 90 bp | CTCATTCTGCTGATGGATGTTAACCAGACTTCTCCAAAGAACACATTTAATGGTTCACTCCTCAATTTGTaGGTTTTAGAACCAGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LILLMDVNQTSPKNTFNGSLLNL*VLEPVS Trigger: GGAGACTGGTTCTAAAACTCACAAATTGAGGAGTGA...ACCATTAAATGTGTTCTTTGGAGAAGTCTGGTTAACATCCATCAGCAGAATGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR CCA 90 bp | ACTTCAAGATGTTGGAGAGAGAGGGACTCTTGGAATGGGATTCTGTTCTCTTTGTTCCTTTTTGTTCATTaGTTTTTCTCAAGACAGGGT | + |
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Preference number: 2 (lower is better) Translates to: TSRCWRERDSWNGILFSLFLFVH*FFSRQG Trigger: ACCCTGTCTTGAGAAAAACCAATGAACAAAAAGGAA...CAAAGAGAACAGAATCCCATTCCAAGAGTCCCTCTCTCTCCAACATCTTGAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR CAA 90 bp | CTTAGGTACTATTATTATAAAGAAGCAGCATTAGTGTCCATCTCATaGATCCAGGCACTAGGACTGAAAGGAAGGCTGGTTATAAATAAG | + |
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Preference number: 2 (lower is better) Translates to: LRYYYYKEAALVSIS*IQALGLKGRLVINK Trigger: CTTATTTATAACCAGCCTTCCTTTCAGTCCTAGTGCCTGGATCAATGAGATGGACACTAATGCTGCTTCTTTATAATAATAGTACCTAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR GCA 90 bp | GAATACCTACACTTTGTGCAATTTGGCATGAACATGAGGAAGCACATTGTTTTCGGAAGAGGCACATATTaGATTAGAAAACAAAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: EYLHFVQFGMNMRKHIVFGRGTY*IRKQRA Trigger: AGCTCTTTGTTTTCTAATGCAATATGTGCCTCTTCC...GAAAACAATGTGCTTCCTCATGTTCATGCCAAATTGCACAAAGTGTAGGTATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR TCA 90 bp | ATTCCAGCACTAGAAAGTAAAGTCTCTCTAATAATATCTGTGTGTTTTGGGATGAAGGAAAAACTGGCTTaGAGCAATTGTTTCCGATTG | + |
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Preference number: 2 (lower is better) Translates to: IPALESKVSLIISVCFGMKEKLA*SNCFRL Trigger: CAATCGGAAACAATTGCTTCAAGCCAGTTTTTCCTT...CATCCCAAAACACACAGATATTATTAGAGAGACTTTACTTTCTAGTGCTGGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR CCA 90 bp | CTATCTTTTTCCAAGGACATCGTTGCAGCAAACGGAAGAACATTAACAAAGTACTGTGCATTAGAGTGCTaGTTGAAAAATGAAAACCAT | + |
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Preference number: 2 (lower is better) Translates to: LSFSKDIVAANGRTLTKYCALEC*LKNENH Trigger: ATGGTTTTCATTTTTCAACCAGCACTCTAATGCACA...GTACTTTGTTAATGTTCTTCCGTTTGCTGCAACGATGTCCTTGGAAAAAGATAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR CAA 90 bp | AGGACCTTGGTCACAGTCTGTTTGATCTCCTTAAATTTCAGATACTaGATACAGGGTTTGTTCAGAGCTCATCAAATATTTAAATTGCTA | + |
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Preference number: 2 (lower is better) Translates to: RTLVTVCLISLNFRY*IQGLFRAHQIFKLL Trigger: TAGCAATTTAAATATTTGATGAGCTCTGAACAAACCCTGTATCAAGTATCTGAAATTTAAGGAGATCAAACAGACTGTGACCAAGGTCCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR CCA 90 bp | ATTCCAGCACTAGAAAGTAAAGTCTCTCTAATAATATCTGTGTGTTTTGGGATGGTTGCTTTCAATAGCTaGATTGTTTTCCTTCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: IPALESKVSLIISVCFGMVAFNS*IVFLLS Trigger: ACTGAGAAGGAAAACAATCCAGCTATTGAAAGCAAC...CATCCCAAAACACACAGATATTATTAGAGAGACTTTACTTTCTAGTGCTGGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR GCA 72 bp | GCCTGGAGCTCATATGGAGAGCAACCAGGGTGGTCTTaGAGTGATCCCCCTCCTCTGCATCCCAGGAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: AWSSYGEQPGWS*SDPPPLHPRSW Trigger: CCAGCTCCTGGGATGCAGAGGAGGGGGATCACTGCAAGACCACCCTGGTTGCTCTCCATATGAGCTCCAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR GCA 72 bp | AGCAACCAGGGTGGTCTTGCAGTGATCCCCCTCCTCTaGATCCCAGGAGCTGGGACAGGCATTCACTATTAT | + |
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Preference number: 3 (lower is better) Translates to: SNQGGLAVIPLL*IPGAGTGIHYY Trigger: ATAATAGTGAATGCCTGTCCCAGCTCCTGGGATGCAGAGGAGGGGGATCACTGCAAGACCACCCTGGTTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR GCA 72 bp | GGGTCCGATGATCTTGTTAGATGTCCTCTGTGCCTGTaGACAGAGCATGTCTTTCAGCCCAACTGGGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: GSDDLVRCPLCL*TEHVFQPNWVS Trigger: AGAGACCCAGTTGGGCTGAAAGACATGCTCTGTGCACAGGCACAGAGGACATCTAACAAGATCATCGGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR CCA 72 bp | GTTGCCAAGTCTGGAAAGATCTGCACAGGGGTGCAATaGAACACCCGAACTGTGACACTAGCAGTCCAAACG | + |
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Preference number: 3 (lower is better) Translates to: VAKSGKICTGVQ*NTRTVTLAVQT Trigger: CGTTTGGACTGCTAGTGTCACAGTTCGGGTGTTCCATTGCACCCCTGTGCAGATCTTTCCAGACTTGGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR GCA 72 bp | GCATTAGGGTCCGATGATCTTGTTAGATGTCCTCTGTaGCTGTGCACAGAGCATGTCTTTCAGCCCAACTGG | + |
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Preference number: 3 (lower is better) Translates to: ALGSDDLVRCPL*LCTEHVFQPNW Trigger: CCAGTTGGGCTGAAAGACATGCTCTGTGCACAGGCACAGAGGACATCTAACAAGATCATCGGACCCTAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR CAA 90 bp | AAGTTCCAATGCCTTCCAGACTTTACAGCCCAGACAGCAGCTTCTGTACTGTCCTTAGTGTCCATCTCATaGATCCAGGCACTAGGACTG | + |
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Preference number: 3 (lower is better) Translates to: KFQCLPDFTAQTAASVLSLVSIS*IQALGL Trigger: CAGTCCTAGTGCCTGGATCAATGAGATGGACACTAA...GGACAGTACAGAAGCTGCTGTCTGGGCTGTAAAGTCTGGAAGGCATTGGAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR CCA 72 bp | GGGATATCAACAACAAGTAGTTCCACTTTCCAACTGTaGAAGCAGAGTACCGAAGATTGGGGGATGAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: GISTTSSSTFQL*KQSTEDWGMSS Trigger: GGAGCTCATCCCCCAATCTTCGGTACTCTGCTTCCACAGTTGGAAAGTGGAACTACTTGTTGTTGATATCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR CAA 90 bp | ACAGAGAAGTTCCAATGCCTTCCAGACTTTACAGCCCAGACAGCAGCTTCTGTATTAGGCTTTCATGGATaGGGGGAGGGTAAAAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: TEKFQCLPDFTAQTAASVLGFHG*GEGKKE Trigger: TTCCTTTTTACCCTCCCCCAATCCATGAAAGCCTAA...TACAGAAGCTGCTGTCTGGGCTGTAAAGTCTGGAAGGCATTGGAACTTCTCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR CAA 90 bp | CTCATTCTGCTGATGGATGTTAACCAGACTTCTCCAAAGAACACATTTAATGGTGCAGAGTACCGAAGATaGGGGGATGAGCTCCCACAG | + |
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Preference number: 3 (lower is better) Translates to: LILLMDVNQTSPKNTFNGAEYRR*GDELPQ Trigger: CTGTGGGAGCTCATCCCCCAATCTTCGGTACTCTGC...ACCATTAAATGTGTTCTTTGGAGAAGTCTGGTTAACATCCATCAGCAGAATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| 3UTR-3UTR CAA 90 bp | CCGTTAAGAGTTGGGGCTTTTATTGTCAGCAGCTGTGCATTAGAGTGCTGGTTGGAGTTGTTCCCAATATaGAAATCTGTAAGCCTCACG | + |
|
Preference number: 3 (lower is better) Translates to: PLRVGAFIVSSCALECWLELFPI*KSVSLT Trigger: CGTGAGGCTTACAGATTTCAATATTGGGAACAACTC...CAACCAGCACTCTAATGCACAGCTGCTGACAATAAAAGCCCCAACTCTTAACGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTCCAATGCCTTCCAGACTTTACAGCCCAGACAGCAGCTTCTGTACTGTCCCCAACACAGATTTGTTaGTACCAGGCAACTCTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: KFQCLPDFTAQTAASVLSPTQIC*YQATLF Trigger: AAAAAGAGTTGCCTGGTACAAACAAATCTGTGTTGG...GGACAGTACAGAAGCTGCTGTCTGGGCTGTAAAGTCTGGAAGGCATTGGAACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTCCAATGCCTTCCAGACTTTACAGCCCAGACAGCAGCTTCTGTACTGTCCCTTTCAATAGCTGGATaGTTTTCCTTCTCAGTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: KFQCLPDFTAQTAASVLSLSIAG*FSFSVA Trigger: TGCAACTGAGAAGGAAAACAATCCAGCTATTGAAAG...GGACAGTACAGAAGCTGCTGTCTGGGCTGTAAAGTCTGGAAGGCATTGGAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTCCAATGCCTTCCAGACTTTACAGCCCAGACAGCAGCTTCTGTACTGTCCAAAGGAAAAACTGGCTaGAAGCAATTGTTTCCGATT | + |
|
Preference number: 3 (lower is better) Translates to: KFQCLPDFTAQTAASVLSKGKTG*KQLFPI Trigger: AATCGGAAACAATTGCTTCAAGCCAGTTTTTCCTTT...GGACAGTACAGAAGCTGCTGTCTGGGCTGTAAAGTCTGGAAGGCATTGGAACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAGAAGTTCCAATGCCTTCCAGACTTTACAGCCCAGACAGCAGCTTCTGTAAGGACAGATTTTGCCTaGTTAAATTCTCAACAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: TEKFQCLPDFTAQTAASVRTDFA*LNSQQD Trigger: GTCCTGTTGAGAATTTAACAAGGCAAAATCTGTCCT...TACAGAAGCTGCTGTCTGGGCTGTAAAGTCTGGAAGGCATTGGAACTTCTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR TCA 72 bp | GGATTTATAGCAAATTGGCAACTTGAGCTTAACTGTTaGAGTCCCCCAGTGTCTTTCCTTTTCTGGCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GFIANWQLELNC*SPPVSFLFWLS Trigger: GGAGAGCCAGAAAAGGAAAGACACTGGGGGACTTCAACAGTTAAGCTCAAGTTGCCAATTTGCTATAAATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR GCA 72 bp | GCAAACGGAAGAACATTAACAAAGTACTCTAGGCTCTaGAAGAAAACATTCTGCGCTAGGAGCATGGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: ANGRTLTKYSRL*KKTFCARSMEE Trigger: TTCCTCCATGCTCCTAGCGCAGAATGTTTTCTTGCAGAGCCTAGAGTACTTTGTTAATGTTCTTCCGTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR CCA 72 bp | AACTTCAAGATGTTGGAGAGAGAGGGACTCTTGGAATaGGATTCTGTTCTCTTTGCTCCATGGTTATTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: NFKMLEREGLLE*DSVLFAPWLFQ Trigger: CTGGAATAACCATGGAGCAAAGAGAACAGAATCCCATTCCAAGAGTCCCTCTCTCTCCAACATCTTGAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAGAAGTTCCAATGCCTTCCAGACTTTACAGCCCAGACAGCAGCTTCTGTATTGGTCACAGTCTGTTaGATCTCCTTAAATTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TEKFQCLPDFTAQTAASVLVTVC*ISLNFR Trigger: TCTGAAATTTAAGGAGATCAAACAGACTGTGACCAA...TACAGAAGCTGCTGTCTGGGCTGTAAAGTCTGGAAGGCATTGGAACTTCTCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR-3UTR CAA 90 bp | CTCATTCTGCTGATGGATGTTAACCAGACTTCTCCAAAGAACACATTTAATGGTTGTTTTCCTTCTCAGTaGCACTGGAACCCCAACACA | + |
|
Preference number: 3 (lower is better) Translates to: LILLMDVNQTSPKNTFNGCFPSQ*HWNPNT Trigger: TGTGTTGGGGTTCCAGTGCAACTGAGAAGGAAAACA...ACCATTAAATGTGTTCTTTGGAGAAGTCTGGTTAACATCCATCAGCAGAATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR-3UTR CAA 90 bp | CTCATTCTGCTGATGGATGTTAACCAGACTTCTCCAAAGAACACATTTAATGGTTCAGGGAAGGCTGCTTaGATGCTGGTTTCTTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LILLMDVNQTSPKNTFNGSGKAA*MLVSSE Trigger: TTCAGAAGAAACCAGCATCAAAGCAGCCTTCCCTGA...ACCATTAAATGTGTTCTTTGGAGAAGTCTGGTTAACATCCATCAGCAGAATGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR TCA 72 bp | AGTCTTAAGACACTGAACAATCAGCTTGTATTAACCTaGGCTTTACCCTTCCAGTGCTTCCCTGTAGTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: SLKTLNNQLVLT*ALPFQCFPVVY Trigger: GTAAACTACAGGGAAGCACTGGAAGGGTAAAGCTCAGGTTAATACAAGCTGATTGTTCAGTGTCTTAAGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR-3UTR CAA 90 bp | TATGTAAGAGCACTAGGGAGTTACATAGCACCTGATAGCTGTGGGATATCAACAATTCCTTTTTGTTCATaGGTTTTTCTCAAGACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: YVRALGSYIAPDSCGISTIPFCS*VFLKTG Trigger: CCCTGTCTTGAGAAAAACCAATGAACAAAAAGGAAT...TGTTGATATCCCACAGCTATCAGGTGCTATGTAACTCCCTAGTGCTCTTACATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR TCA 72 bp | AACTGTGACACTAGCAGTCCAAACGGTGGCTTAGTTTaGGGATTAGAGTTGTTCCCAATATTGAAATCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: NCDTSSPNGGLV*GLELFPILKSV Trigger: TACAGATTTCAATATTGGGAACAACTCTAATCCTCAAACTAAGCCACCGTTTGGACTGCTAGTGTCACAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR TCA 72 bp | ATGAACATGTTGATGAGAGTTGAAAGACATAGAGTGTaGATGGTTATGACATTCCTGTCATTTGGGGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: MNMLMRVERHRV*MVMTFLSFGAL Trigger: CAAGGCCCCAAATGACAGGAATGTCATAACCATTCACACTCTATGTCTTTCAACTCTCATCAACATGTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR CCA 72 bp | GGGTTTCTTCTTTCTCCAAGCATCCAGAGAAAATCCTaGTTTATTTGGCCTTTTGGAAACAGCATAAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GFLLSPSIQRKS*FIWPFGNSISL Trigger: AAGACTTATGCTGTTTCCAAAAGGCCAAATAAACCAGGATTTTCTCTGGATGCTTGGAGAAAGAAGAAACCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR-3UTR CAA 90 bp | GAATACCTACACTTTGTGCAATTTGGCATGAACATGAGGAAGCACATTGTTTTCAAGGAGTTCAATTCCTaGATAACTGAGATGCCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: EYLHFVQFGMNMRKHIVFKEFNS*ITEMPV Trigger: TACAGGCATCTCAGTTATCAAGGAATTGAACTCCTT...GAAAACAATGTGCTTCCTCATGTTCATGCCAAATTGCACAAAGTGTAGGTATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCAGCACTAGAAAGTAAAGTCTCTCTAATAATATCTGTGTGTTTTGGGATGAACCCCAACACAGATTaGTTTGTACCAGGCAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: IPALESKVSLIISVCFGMNPNTD*FVPGNS Trigger: AGAGTTGCCTGGTACAAACAAATCTGTGTTGGGGTT...CATCCCAAAACACACAGATATTATTAGAGAGACTTTACTTTCTAGTGCTGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR-3UTR CAA 90 bp | CTCATTCTGCTGATGGATGTTAACCAGACTTCTCCAAAGAACACATTTAATGGTGCATTAGAGTGCTGGTaGAAAAATGAAAACCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: LILLMDVNQTSPKNTFNGALECW*KNENHQ Trigger: TTGATGGTTTTCATTTTTCAACCAGCACTCTAATGC...ACCATTAAATGTGTTCTTTGGAGAAGTCTGGTTAACATCCATCAGCAGAATGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR-3UTR CAA 90 bp | CTATCTTTTTCCAAGGACATCGTTGCAGCAAACGGAAGAACATTAACAAAGTACATGGAGCACATTTGTTaGCTCAGAAATACTGTAATG | + |
|
Preference number: 3 (lower is better) Translates to: LSFSKDIVAANGRTLTKYMEHIC*LRNTVM Trigger: CATTACAGTATTTCTGAGCAAACAAATGTGCTCCAT...GTACTTTGTTAATGTTCTTCCGTTTGCTGCAACGATGTCCTTGGAAAAAGATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR-3UTR CAA 90 bp | CTCATTCTGCTGATGGATGTTAACCAGACTTCTCCAAAGAACACATTTAATGGTAAAGAGCTGTCTAAATaGCAAACTTCAAGATGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LILLMDVNQTSPKNTFNGKELSK*QTSRCW Trigger: CCAACATCTTGAAGTTTGCAATTTAGACAGCTCTTT...ACCATTAAATGTGTTCTTTGGAGAAGTCTGGTTAACATCCATCAGCAGAATGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCAGCACTAGAAAGTAAAGTCTCTCTAATAATATCTGTGTGTTTTGGGATGTACTTGATACAGGGTTaGTTCAGAGCTCATCAAATA | + |
|
Preference number: 3 (lower is better) Translates to: IPALESKVSLIISVCFGMYLIQG*FRAHQI Trigger: TATTTGATGAGCTCTGAACAAACCCTGTATCAAGTA...CATCCCAAAACACACAGATATTATTAGAGAGACTTTACTTTCTAGTGCTGGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR CCA 72 bp | CCTGGTCTTAAAATATTAACTGTTATGTTACTAAAGTaGGAGTCTGATCTGTTCCTCTGTATTAGTTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: PGLKILTVMLLK*ESDLFLCISCG Trigger: ACCACAACTAATACAGAGGAACAGATCAGACTCCCACTTTAGTAACATAACAGTTAATATTTTAAGACCAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| CDS-3UTR TCA 90 bp | AGAACATTAACAAAGTACTCTAGGCTCTGCAAGAAAACATTCTGCGCTAGGAGCGGCAGCGGTCTGGCTTaGTTAGATGGCACCGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RTLTKYSRLCKKTFCARSGSGLA*LDGTGH Trigger: GTGACCGGTGCCATCTAATCAAGCCAGACCGCTGCC...GCTCCTAGCGCAGAATGTTTTCTTGCAGAGCCTAGAGTACTTTGTTAATGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR CAA 72 bp | TTCCACTTTCCAACTGTGGAAGCAGAGTACCGAAGATaGGGGGATGAGCTCCCACAGAAGTTATTAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FHFPTVEAEYRR*GDELPQKLLGR Trigger: CCTGCCTAATAACTTCTGTGGGAGCTCATCCCCCAATCTTCGGTACTCTGCTTCCACAGTTGGAAAGTGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| CDS-3UTR TCA 90 bp | ACAGAGAAGTTCCAATGCCTTCCAGACTTTACAGCCCAGACAGCAGCTTCTGTACAGCAGCGGGTTCTGTaGCTCATTCATAGACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TEKFQCLPDFTAQTAASVQQRVL*LIHRPH Trigger: ATGAGGTCTATGAATGAGTCACAGAACCCGCTGCTG...TACAGAAGCTGCTGTCTGGGCTGTAAAGTCTGGAAGGCATTGGAACTTCTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| CDS-3UTR CCA 90 bp | ATGCTAATACACTCCACAGAGAAGTTCCAATGCCTTCCAGACTTTACAGCCCAGGTCCATCACCAGGGCTaGACCCAATGGGTATTAACC | + |
|
Preference number: 4 (lower is better) Translates to: MLIHSTEKFQCLPDFTAQVHHQG*TQWVLT Trigger: GGTTAATACCCATTGGGTCCAGCCCTGGTGATGGAC...CTGGGCTGTAAAGTCTGGAAGGCATTGGAACTTCTCTGTGGAGTGTATTAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| CDS-3UTR TCA 90 bp | CTATCTTTTTCCAAGGACATCGTTGCAGCAAACGGAAGAACATTAACAAAGTACGCACAGACAGAACAGTaGTGGCAGCGGTCTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSFSKDIVAANGRTLTKYAQTEQ*WQRSGL Trigger: CAAGCCAGACCGCTGCCATCACTGTTCTGTCTGTGC...GTACTTTGTTAATGTTCTTCCGTTTGCTGCAACGATGTCCTTGGAAAAAGATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| CDS-3UTR GCA 90 bp | CCGTTAAGAGTTGGGGCTTTTATTGTCAGCAGCTGTGCATTAGAGTGCTGGTTGAACTTCTGGTTTGGCTaGTGTGGGAGTGTGAAGATA | + |
|
Preference number: 4 (lower is better) Translates to: PLRVGAFIVSSCALECWLNFWFG*CGSVKI Trigger: TATCTTCACACTCCCACAGCAGCCAAACCAGAAGTT...CAACCAGCACTCTAATGCACAGCTGCTGACAATAAAAGCCCCAACTCTTAACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| CDS-3UTR CCA 90 bp | ATGCTAATACACTCCACAGAGAAGTTCCAATGCCTTCCAGACTTTACAGCCCAGACAAGCATCTGCTTCTaGACCTCAGGTCTCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MLIHSTEKFQCLPDFTAQTSICF*TSGLSS Trigger: TGAAGAGAGACCTGAGGTCCAGAAGCAGATGCTTGT...CTGGGCTGTAAAGTCTGGAAGGCATTGGAACTTCTCTGTGGAGTGTATTAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| CDS-3UTR CCA 90 bp | GAATACCTACACTTTGTGCAATTTGGCATGAACATGAGGAAGCACATTGTTTTCGACAATAACGAGCACTaGCACCCAGGACAGTACCCG | + |
|
Preference number: 4 (lower is better) Translates to: EYLHFVQFGMNMRKHIVFDNNEH*HPGQYP Trigger: CGGGTACTGTCCTGGGTGCCAGTGCTCGTTATTGTC...GAAAACAATGTGCTTCCTCATGTTCATGCCAAATTGCACAAAGTGTAGGTATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| CDS-3UTR CCA 90 bp | AGAACATTAACAAAGTACTCTAGGCTCTGCAAGAAAACATTCTGCGCTAGGAGCTCTGGCTTGATTAGATaGCACCGGTCACAGAACCGT | + |
|
Preference number: 4 (lower is better) Translates to: RTLTKYSRLCKKTFCARSSGLIR*HRSQNR Trigger: ACGGTTCTGTGACCGGTGCCATCTAATCAAGCCAGA...GCTCCTAGCGCAGAATGTTTTCTTGCAGAGCCTAGAGTACTTTGTTAATGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| CDS-3UTR CCA 90 bp | TATTATAAAGAAGCAGCATTAGTGTCCATCTCATTGATCCAGGCACTAGGACTGGACAAGTGGAACTTCTaGTTTGGCTGCTGTGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YYKEAALVSISLIQALGLDKWNF*FGCCGS Trigger: ACTCCCACAGCAGCCAAACCAGAAGTTCCACTTGTC...CAGTCCTAGTGCCTGGATCAATGAGATGGACACTAATGCTGCTTCTTTATAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR CAA 72 bp | TTTCCTTCTCAGTTGCACTGGAACCCCAACACAGATTaGTTTGTACCAGGCAACTCTTTTTCACTCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FPSQLHWNPNTD*FVPGNSFSLRD Trigger: GTCTCTGAGTGAAAAAGAGTTGCCTGGTACAAACAAATCTGTGTTGGGGTTCCAGTGCAACTGAGAAGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR CAA 72 bp | AATGGACCCATTAGGTTGTTGCTTTCAATAGCTGGATaGTTTTCCTTCTCAGTTGCACTGGAACCCCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: NGPIRLLLSIAG*FSFSVALEPQH Trigger: GTGTTGGGGTTCCAGTGCAACTGAGAAGGAAAACAATCCAGCTATTGAAAGCAACAACCTAATGGGTCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR CAA 72 bp | GAAGTGCTGCTTGCACCCCTTTATAGAAAGGTACATTaGTATAGGACTAAAAGGCAAGGTCTGTGGGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: EVLLAPLYRKVH*YRTKRQGLWAI Trigger: TATGGCCCACAGACCTTGCCTTTTAGTCCTATACAAATGTACCTTTCTATAAAGGGGTGCAAGCAGCACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| CDS-3UTR CCA 90 bp | ACTTCAAGATGTTGGAGAGAGAGGGACTCTTGGAATGGGATTCTGTTCTCTTTGGAACCCATTTTTCTCTaGTCCACTTGTGAATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSRCWRERDSWNGILFSLEPIFL*STCEYW Trigger: CCAGTATTCACAAGTGGACCAGAGAAAAATGGGTTC...CAAAGAGAACAGAATCCCATTCCAAGAGTCCCTCTCTCTCCAACATCTTGAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR CAA 72 bp | CTTCTCAGTTGCACTGGAACCCCAACACAGATTTGTTaGTACCAGGCAACTCTTTTTCACTCAGAGACATTT | + |
|
Preference number: 4 (lower is better) Translates to: LLSCTGTPTQIC*YQATLFHSETF Trigger: AAATGTCTCTGAGTGAAAAAGAGTTGCCTGGTACAAACAAATCTGTGTTGGGGTTCCAGTGCAACTGAGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| CDS-3UTR CCA 90 bp | CTCATTCTGCTGATGGATGTTAACCAGACTTCTCCAAAGAACACATTTAATGGTCAGGGCTGGACCCAATaGGTATTAACCAGAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LILLMDVNQTSPKNTFNGQGWTQ*VLTRTS Trigger: AGAAGTTCTGGTTAATACCCATTGGGTCCAGCCCTG...ACCATTAAATGTGTTCTTTGGAGAAGTCTGGTTAACATCCATCAGCAGAATGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR CAA 72 bp | TGTGAAATGTTTGTTCTAAAGACCTATCAATCTGCCTaGAAAGAAGGGCGTGCATTCATGTCTATGTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: CEMFVLKTYQSA*KEGRAFMSMCT Trigger: CGTGCACATAGACATGAATGCACGCCCTTCTTTCAAGGCAGATTGATAGGTCTTTAGAACAAACATTTCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| CDS-3UTR CCA 90 bp | TATTATAAAGAAGCAGCATTAGTGTCCATCTCATTGATCCAGGCACTAGGACTGGATAACTTTTTCCGCTaGACTCAAAACAGTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: YYKEAALVSISLIQALGLDNFFR*TQNSHQ Trigger: CTGGTGACTGTTTTGAGTCCAGCGGAAAAAGTTATC...CAGTCCTAGTGCCTGGATCAATGAGATGGACACTAATGCTGCTTCTTTATAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| CDS-3UTR CCA 90 bp | ACTTCAAGATGTTGGAGAGAGAGGGACTCTTGGAATGGGATTCTGTTCTCTTTGTTTTTAAAACACACATaGCACAGACAGAACAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TSRCWRERDSWNGILFSLFLKHT*HRQNSD Trigger: ATCACTGTTCTGTCTGTGCCATGTGTGTTTTAAAAA...CAAAGAGAACAGAATCCCATTCCAAGAGTCCCTCTCTCTCCAACATCTTGAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR CAA 72 bp | TATTATTATAAAGAAGCAGCATTAGTGTCCATCTCATaGATCCAGGCACTAGGACTGAAAGGAAGGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: YYYKEAALVSIS*IQALGLKGRLV Trigger: AACCAGCCTTCCTTTCAGTCCTAGTGCCTGGATCAATGAGATGGACACTAATGCTGCTTCTTTATAATAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| CDS-3UTR TCA 90 bp | GAATACCTACACTTTGTGCAATTTGGCATGAACATGAGGAAGCACATTGTTTTCTTAACCCATGGGCAGTaGTGGTCCATTTTTAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: EYLHFVQFGMNMRKHIVFLTHGQ*WSIFKT Trigger: TGTTTTAAAAATGGACCATCACTGCCCATGGGTTAA...GAAAACAATGTGCTTCCTCATGTTCATGCCAAATTGCACAAAGTGTAGGTATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR CAA 72 bp | GCACATATTGCATTAGAAAACAAAGAGCTGTCTAAATaGCAAACTTCAAGATGTTGGAGAGAGAGGGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: AHIALENKELSK*QTSRCWRERDS Trigger: AGAGTCCCTCTCTCTCCAACATCTTGAAGTTTGCAATTTAGACAGCTCTTTGTTTTCTAATGCAATATGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| CDS-3UTR CCA 90 bp | ATTCCAGCACTAGAAAGTAAAGTCTCTCTAATAATATCTGTGTGTTTTGGGATGGCAGTTATTAACCCATaGGCAGTGATGGTCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: IPALESKVSLIISVCFGMAVINP*AVMVHF Trigger: AAAATGGACCATCACTGCCCATGGGTTAATAACTGC...CATCCCAAAACACACAGATATTATTAGAGAGACTTTACTTTCTAGTGCTGGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
||
| 3UTR CAA 72 bp | GTCACAGTCTGTTTGATCTCCTTAAATTTCAGATACTaGATACAGGGTTTGTTCAGAGCTCATCAAATATTT | + |
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Preference number: 4 (lower is better) Translates to: VTVCLISLNFRY*IQGLFRAHQIF Trigger: AAATATTTGATGAGCTCTGAACAAACCCTGTATCAAGTATCTGAAATTTAAGGAGATCAAACAGACTGTGAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| CDS TCA 90 bp | CTCATTGTCTTCCCAGGGTTCCTCATTTGCCAGCAGCGGGTTCTGTaGCTCATTCATAGACCTCATAGGGAAGGAGTGTCCATCACCAGG | + |
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Preference number: 5 (lower is better) Translates to: LIVFPGFLICQQRVL*LIHRPHREGVSITR Trigger: CCTGGTGATGGACACTCCTTCCCTATGAGGTCTATGAATGAGTCACAGAACCCGCTGCTGGCAAATGAGGAACCCTGGGAAGACAATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| CDS-3UTR CAA 90 bp | GAATACCTACACTTTGTGCAATTTGGCATGAACATGAGGAAGCACATTGTTTTCTGGCAGCGGTCTGGCTaGATTAGATGGCACCGGTCA | + |
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Preference number: 5 (lower is better) Translates to: EYLHFVQFGMNMRKHIVFWQRSG*IRWHRS Trigger: TGACCGGTGCCATCTAATCAAGCCAGACCGCTGCCA...GAAAACAATGTGCTTCCTCATGTTCATGCCAAATTGCACAAAGTGTAGGTATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| CDS-3UTR CAA 90 bp | AAGTTCCAATGCCTTCCAGACTTTACAGCCCAGACAGCAGCTTCTGTACTGTCCTTGATGAAGCCAAGATaGAACCCATTTTTCTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: KFQCLPDFTAQTAASVLSLMKPR*NPFFSG Trigger: ACCAGAGAAAAATGGGTTCAATCTTGGCTTCATCAA...GGACAGTACAGAAGCTGCTGTCTGGGCTGTAAAGTCTGGAAGGCATTGGAACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| CDS TCA 90 bp | CCAATGGGTATTAACCAGAACTTCTTATTATCGCCAAACACCTGCTaGATATTCTTGATGAAGCCAAGATTGAACCCATTTTTCTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: PMGINQNFLLSPNTC*IFLMKPRLNPFFSG Trigger: ACCAGAGAAAAATGGGTTCAATCTTGGCTTCATCAAGAATATTCAGCAGGTGTTTGGCGATAATAAGAAGTTCTGGTTAATACCCATTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| CDS-3UTR CAA 90 bp | ATTCCAGCACTAGAAAGTAAAGTCTCTCTAATAATATCTGTGTGTTTTGGGATGGCCTCTAAGGTAGTTTaGTTTCTGCTGACAAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: IPALESKVSLIISVCFGMASKVV*FLLTSQ Trigger: TTGGCTTGTCAGCAGAAACAAAACTACCTTAGAGGC...CATCCCAAAACACACAGATATTATTAGAGAGACTTTACTTTCTAGTGCTGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| CDS CAA 72 bp | ACCGGTCACAGAACCGTACAGCTCCACTCCCGGTTCTaGTGTACACTGGTAACTTCTTGGCCATGTCCACAA | + |
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Preference number: 6 (lower is better) Translates to: TGHRTVQLHSRF*CTLVTSWPCPQ Trigger: TTGTGGACATGGCCAAGAAGTTACCAGTGTACACAAGAACCGGGAGTGGAGCTGTACGGTTCTGTGACCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| CDS TCA 72 bp | TCCATTTTTAAAACACACATGGCACAGACAGAACAGTaGTGGCAGCGGTCTGGCTTGATTAGATGGCACCGG | + |
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Preference number: 6 (lower is better) Translates to: SIFKTHMAQTEQ*WQRSGLIRWHR Trigger: CCGGTGCCATCTAATCAAGCCAGACCGCTGCCATCACTGTTCTGTCTGTGCCATGTGTGTTTTAAAAATGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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| CDS CCA 72 bp | ATTCTTGATGAAGCCAAGATTGAACCCATTTTTCTCTaGTCCACTTGTGAATACTGGTGTGCAGAAGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: ILDEAKIEPIFL*STCEYWCAEGL Trigger: GAGGCCTTCTGCACACCAGTATTCACAAGTGGACCAGAGAAAAATGGGTTCAATCTTGGCTTCATCAAGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042070.6 |
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