Pregenerated sensors for ZDHHC14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034265Ensembl transcript IDs: ENSMUST00000089185.6
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCCCAAAAGCAGCCGACAGAGGGCGCTGCACGCTGCATCCACGCTaGCTCTTTCAATTCCAGGCTCCTCCCATTGAGGGAGTCTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: VPKAADRGRCTLHPR*LFQFQAPPIEGVSS Trigger: AGAGGAGACTCCCTCAATGGGAGGAGCCTGGAATTGAAAGAGGCAGCGTGGATGCAGCGTGCAGCGCCCTCTGTCGGCTGCTTTTGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| 3UTR GCA 90 bp | TCCTCGTGTCTGTCCCAAAAGCAGCCGACAGAGGGCGCTGCACGCTaGATCCACGCTGCCTCTTTCAATTCCAGGCTCCTCCCATTGAGG | + |
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Preference number: 1 (lower is better) Translates to: SSCLSQKQPTEGAAR*IHAASFNSRLLPLR Trigger: CCTCAATGGGAGGAGCCTGGAATTGAAAGAGGCAGCGTGGATGCAGCGTGCAGCGCCCTCTGTCGGCTGCTTTTGGGACAGACACGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| 3UTR CCA 90 bp | TCCTCTTCCCGGTCCACTCTGCAGATTCCAAACAAAACGTCCTCTTaGCTATGTCCAGTAATTTGTTTTTGTTTGTCACCTGTGGTCCCC | + |
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Preference number: 1 (lower is better) Translates to: SSSRSTLQIPNKTSS*LCPVICFCLSPVVP Trigger: GGGGACCACAGGTGACAAACAAAAACAAATTACTGGACATAGCCAAGAGGACGTTTTGTTTGGAATCTGCAGAGTGGACCGGGAAGAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| 3UTR CCA 90 bp | CATCTTTTCTTCTGGAATACCACTGCTGTAACACAGACTATAGTGTaGCATGCAATCCCATGTCTGGCCGGCTTTTCCCTTTGGAACTTT | + |
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Preference number: 1 (lower is better) Translates to: HLFFWNTTAVTQTIV*HAIPCLAGFSLWNF Trigger: AAAGTTCCAAAGGGAAAAGCCGGCCAGACATGGGATTGCATGCCACACTATAGTCTGTGTTACAGCAGTGGTATTCCAGAAGAAAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| 3UTR GCA 90 bp | TTTCTTCTGGAATACCACTGCTGTAACACAGACTATAGTGTGGCATaGAATCCCATGTCTGGCCGGCTTTTCCCTTTGGAACTTTTGTTT | + |
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Preference number: 1 (lower is better) Translates to: FLLEYHCCNTDYSVA*NPMSGRLFPLELLF Trigger: AAACAAAAGTTCCAAAGGGAAAAGCCGGCCAGACATGGGATTGCATGCCACACTATAGTCTGTGTTACAGCAGTGGTATTCCAGAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| 3UTR-3UTR TCA 90 bp | CAGGGGATGCCCCCAGTAACCCTCTTCATCAGGAAACGCCCATCCTCATACAGCCCAGGCTCCTCCCATTaGGGGAGTCTCCTCTTCCCG | + |
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Preference number: 2 (lower is better) Translates to: QGMPPVTLFIRKRPSSYSPGSSH*GSLLFP Trigger: CGGGAAGAGGAGACTCCCTCAATGGGAGGAGCCTGG...GCTGTATGAGGATGGGCGTTTCCTGATGAAGAGGGTTACTGGGGGCATCCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| 3UTR-3UTR CCA 90 bp | CAGACTATAGTGTGGCATGCAATCCCATGTCTGGCCGGCTTTTCCCTTTGGAACTTTGTTTGTCACCTGTaGTCCCCAGGGCTGGCCATG | + |
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Preference number: 2 (lower is better) Translates to: QTIVWHAIPCLAGFSLWNFVCHL*SPGLAM Trigger: CATGGCCAGCCCTGGGGACCACAGGTGACAAACAAA...GTTCCAAAGGGAAAAGCCGGCCAGACATGGGATTGCATGCCACACTATAGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| 3UTR CAA 90 bp | CTCCTCTTCCCGGTCCACTCTGCAGATTCCAAACAAAACGTCCTCTaGGCTATGTCCAGTAATTTGTTTTTGTTTGTCACCTGTGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: LLFPVHSADSKQNVL*AMSSNLFLFVTCGP Trigger: GGGACCACAGGTGACAAACAAAAACAAATTACTGGACATAGCCAAGAGGACGTTTTGTTTGGAATCTGCAGAGTGGACCGGGAAGAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| 3UTR-3UTR CCA 90 bp | GGCATGCAATCCCATGTCTGGCCGGCTTTTCCCTTTGGAACTTTTGTTTCGTTTGTTTTAATGAACAAATaGAACGGCGGGTGGATTTCA | + |
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Preference number: 2 (lower is better) Translates to: GMQSHVWPAFPFGTFVSFVLMNK*NGGWIS Trigger: TGAAATCCACCCGCCGTTCCATTTGTTCATTAAAAC...AAACGAAACAAAAGTTCCAAAGGGAAAAGCCGGCCAGACATGGGATTGCATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| 3UTR GCA 72 bp | CTGTCCCAAAAGCAGCCGACAGAGGGCGCTGCACGCTaGATCCACGCTGCCTCTTTCAATTCCAGGCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: LSQKQPTEGAAR*IHAASFNSRLL Trigger: GAGGAGCCTGGAATTGAAAGAGGCAGCGTGGATGCAGCGTGCAGCGCCCTCTGTCGGCTGCTTTTGGGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| 3UTR GCA 72 bp | CTCGTGTCTGTCCCAAAAGCAGCCGACAGAGGGCGCTaGACGCTGCATCCACGCTGCCTCTTTCAATTCCAG | + |
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Preference number: 3 (lower is better) Translates to: LVSVPKAADRGR*TLHPRCLFQFQ Trigger: CTGGAATTGAAAGAGGCAGCGTGGATGCAGCGTGCAGCGCCCTCTGTCGGCTGCTTTTGGGACAGACACGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| 3UTR CCA 72 bp | TTCTGGAATACCACTGCTGTAACACAGACTATAGTGTaGCATGCAATCCCATGTCTGGCCGGCTTTTCCCTT | + |
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Preference number: 3 (lower is better) Translates to: FWNTTAVTQTIV*HAIPCLAGFSL Trigger: AAGGGAAAAGCCGGCCAGACATGGGATTGCATGCCACACTATAGTCTGTGTTACAGCAGTGGTATTCCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| 3UTR-3UTR CAA 90 bp | GGCATTACCCACCGGGTTCGGTCTGTCACATTGGAAAGTATCACAAGATTAAAAGTAATTTGTTTTTGTTaGTCACCTGTGGTCCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: GITHRVRSVTLESITRLKVICFC*SPVVPR Trigger: CCTGGGGACCACAGGTGACAAACAAAAACAAATTAC...TTTTAATCTTGTGATACTTTCCAATGTGACAGACCGAACCCGGTGGGTAATGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| 3UTR-3UTR CAA 90 bp | ACATTAGGTCCAATTTCAGTCTGGCCACCAGTGTCGAAAATTTTCCTCGTGTCTTCCAGTAATTTGTTTTaGTTTGTCACCTGTGGTCCC | + |
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Preference number: 3 (lower is better) Translates to: TLGPISVWPPVSKIFLVSSSNLF*FVTCGP Trigger: GGGACCACAGGTGACAAACAAAAACAAATTACTGGA...AGACACGAGGAAAATTTTCGACACTGGTGGCCAGACTGAAATTGGACCTAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| 3UTR CCA 72 bp | CGGTCCACTCTGCAGATTCCAAACAAAACGTCCTCTTaGCTATGTCCAGTAATTTGTTTTTGTTTGTCACCT | + |
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Preference number: 3 (lower is better) Translates to: RSTLQIPNKTSS*LCPVICFCLSP Trigger: AGGTGACAAACAAAAACAAATTACTGGACATAGCCAAGAGGACGTTTTGTTTGGAATCTGCAGAGTGGACCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| 3UTR-3UTR CAA 90 bp | GGGTGGATTTCAATTAGTAGCTGTAACATTAGGTCCAATTTCAGTCTGGCCACCGCTATGTCCAGTAATTaGTTTTTGTTTGTCACCTGT | + |
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Preference number: 3 (lower is better) Translates to: GWISISSCNIRSNFSLATAMSSN*FLFVTC Trigger: ACAGGTGACAAACAAAAACAAATTACTGGACATAGC...GGTGGCCAGACTGAAATTGGACCTAATGTTACAGCTACTAATTGAAATCCACCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| 3UTR-3UTR CAA 90 bp | CGGGTTCGGTCTGTCACATTGGAAAGTATCACAAGATTAAAAAGAAGGAAAACAGGCCGGCTTTTCCCTTaGGAACTTTTGTTTCGTTTT | + |
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Preference number: 3 (lower is better) Translates to: RVRSVTLESITRLKRRKTGRLFP*ELLFRF Trigger: AAAACGAAACAAAAGTTCCAAAGGGAAAAGCCGGCC...TGTTTTCCTTCTTTTTAATCTTGTGATACTTTCCAATGTGACAGACCGAACCCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| 3UTR CCA 72 bp | TTTCGTTTTGTTTTAATGAACAAATGGAACGGCGGGTaGATTTCAATTAGTAGCTGTAACATTAGGTCCAAT | + |
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Preference number: 3 (lower is better) Translates to: FRFVLMNKWNGG*ISISSCNIRSN Trigger: ATTGGACCTAATGTTACAGCTACTAATTGAAATCCACCCGCCGTTCCATTTGTTCATTAAAACAAAACGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR TCA 90 bp | CAGGGGATGCCCCCAGTAACCCTCTTCATCAGGAAACGCCCATCCTCATACAGCAGGCTGGGCTCGCTCTaGAGCAGGGGCGTGGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: QGMPPVTLFIRKRPSSYSRLGSL*SRGVAA Trigger: CGCAGCCACGCCCCTGCTTCAGAGCGAGCCCAGCCT...GCTGTATGAGGATGGGCGTTTCCTGATGAAGAGGGTTACTGGGGGCATCCCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CCA 90 bp | GTGCCGTCTGCAACAGGGGATGCCCCCAGTAACCCTCTTCATCAGGAAACGCCCTCGTGCAGGGAGTCCTaGCTGGCCAGACCCAACATG | + |
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Preference number: 4 (lower is better) Translates to: VPSATGDAPSNPLHQETPSCRES*LARPNM Trigger: CATGTTGGGTCTGGCCAGCCAGGACTCCCTGCACGA...GGGCGTTTCCTGATGAAGAGGGTTACTGGGGGCATCCCCTGTTGCAGACGGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR TCA 90 bp | GTGCCGTCTGCAACAGGGGATGCCCCCAGTAACCCTCTTCATCAGGAAACGCCCAGGAGCTGTGGGTGCTaGTCTGACTGTACTCGCAGT | + |
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Preference number: 4 (lower is better) Translates to: VPSATGDAPSNPLHQETPRSCGC*SDCTRS Trigger: ACTGCGAGTACAGTCAGATCAGCACCCACAGCTCCT...GGGCGTTTCCTGATGAAGAGGGTTACTGGGGGCATCCCCTGTTGCAGACGGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR GCA 90 bp | GTGCCGTCTGCAACAGGGGATGCCCCCAGTAACCCTCTTCATCAGGAAACGCCCCAAAGAAGAACAGGATaGCACCGACCACGGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: VPSATGDAPSNPLHQETPQRRTG*HRPRGW Trigger: CCATCCCCGTGGTCGGTGGCATCCTGTTCTTCTTTG...GGGCGTTTCCTGATGAAGAGGGTTACTGGGGGCATCCCCTGTTGCAGACGGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CCA 90 bp | CAGACTATAGTGTGGCATGCAATCCCATGTCTGGCCGGCTTTTCCCTTTGGAACGAGGGTGGTGTGGGCTaGCCCAGCGTCAGGCTAGCA | + |
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Preference number: 4 (lower is better) Translates to: QTIVWHAIPCLAGFSLWNEGGVG*PSVRLA Trigger: TGCTAGCCTGACGCTGGGCCAGCCCACACCACCCTC...GTTCCAAAGGGAAAAGCCGGCCAGACATGGGATTGCATGCCACACTATAGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CCA 90 bp | ACAGGGGATGCCCCCAGTAACCCTCTTCATCAGGAAACGCCCATCCTCATACAGTGGCAAGGTTGGGCATaGAGGAGGGTGGTGTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: TGDAPSNPLHQETPILIQWQGWA*RRVVWA Trigger: AGCCCACACCACCCTCCTCCATGCCCAACCTTGCCA...CTGTATGAGGATGGGCGTTTCCTGATGAAGAGGGTTACTGGGGGCATCCCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CCA 90 bp | GGCATGCAATCCCATGTCTGGCCGGCTTTTCCCTTTGGAACTTTTGTTTCGTTTTGTGGGGCGACTCCATaGGAGAGGAGCTGTGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: GMQSHVWPAFPFGTFVSFCGATP*ERSCGC Trigger: GCACCCACAGCTCCTCTCCCATGGAGTCGCCCCACA...AAACGAAACAAAAGTTCCAAAGGGAAAAGCCGGCCAGACATGGGATTGCATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CCA 90 bp | ATTAGGTCCAATTTCAGTCTGGCCACCAGTGTCGAAAATTTTCCTCGTGTCTGTTGGAGGAGGGTGGTGTaGGCTGGCCCAGCGTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: IRSNFSLATSVENFPRVCWRRVV*AGPASG Trigger: GCCTGACGCTGGGCCAGCCCACACCACCCTCCTCCA...ACAGACACGAGGAAAATTTTCGACACTGGTGGCCAGACTGAAATTGGACCTAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| 3UTR CAA 72 bp | GAGGAGTCATTTTATTGGCTGTCCATAGGAAGGTCATaGTCACACAGGAGGCGAGGACTGCCCCATGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: EESFYWLSIGRS*SHRRRGLPHGG Trigger: GCCACCATGGGGCAGTCCTCGCCTCCTGTGTGACAATGACCTTCCTATGGACAGCCAATAAAATGACTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR GCA 90 bp | GTGCCGTCTGCAACAGGGGATGCCCCCAGTAACCCTCTTCATCAGGAAACGCCCGCAAAACGAATTTGGTaGTCTGAATGCACTGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: VPSATGDAPSNPLHQETPAKRIW*SECTGL Trigger: AAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGC...GGGCGTTTCCTGATGAAGAGGGTTACTGGGGGCATCCCCTGTTGCAGACGGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR TCA 90 bp | GGCATTACCCACCGGGTTCGGTCTGTCACATTGGAAAGTATCACAAGATTAAAAGCAGCTCTTCGCTGGTaGGGCTGGGCTCGCTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: GITHRVRSVTLESITRLKAALRW*GWARSE Trigger: TTCAGAGCGAGCCCAGCCTCACCAGCGAAGAGCTGC...TTTTAATCTTGTGATACTTTCCAATGTGACAGACCGAACCCGGTGGGTAATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CCA 90 bp | GGGTGGATTTCAATTAGTAGCTGTAACATTAGGTCCAATTTCAGTCTGGCCACCCGGCTTCATCAGGAGTaGCTCGAGGGAGGACTCCCG | + |
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Preference number: 4 (lower is better) Translates to: GWISISSCNIRSNFSLATRLHQE*LEGGLP Trigger: CGGGAGTCCTCCCTCGAGCCACTCCTGATGAAGCCG...GGTGGCCAGACTGAAATTGGACCTAATGTTACAGCTACTAATTGAAATCCACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CCA 90 bp | TCCTCTTGGCTATGTCCAGTAATTTGTTTTTGTTTGTCACCTGTGGTCCCCAGGAGAGTGTGGCCTCCGTaGCAAGGTTGGGCATGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SSWLCPVICFCLSPVVPRRVWPP*QGWAWR Trigger: CCTCCATGCCCAACCTTGCCACGGAGGCCACACTCT...CCTGGGGACCACAGGTGACAAACAAAAACAAATTACTGGACATAGCCAAGAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR TCA 90 bp | CAGACTATAGTGTGGCATGCAATCCCATGTCTGGCCGGCTTTTCCCTTTGGAACACGAATTTGGTGCTCTaGATGCACTGGTCTTGGTCG | + |
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Preference number: 4 (lower is better) Translates to: QTIVWHAIPCLAGFSLWNTNLVL*MHWSWS Trigger: CGACCAAGACCAGTGCATTCAGAGCACCAAATTCGT...GTTCCAAAGGGAAAAGCCGGCCAGACATGGGATTGCATGCCACACTATAGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CCA 90 bp | ACAGATCAAGAAAATAACAGAGGAGTCATTTTATTGGCTGTCCATAGGAAGGTCACTCGCAGTCTTTCATaGGCCCGCCGCCGCCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: TDQENNRGVILLAVHRKVTRSLS*ARRRRE Trigger: CTCCCGGCGGCGGCGGGCCCATGAAAGACTGCGAGT...GACCTTCCTATGGACAGCCAATAAAATGACTCCTCTGTTATTTTCTTGATCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CCA 90 bp | CAGGGGATGCCCCCAGTAACCCTCTTCATCAGGAAACGCCCATCCTCATACAGCTTTAGTTTCACGGTCTaGCCATTGATGACGACTTCT | + |
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Preference number: 4 (lower is better) Translates to: QGMPPVTLFIRKRPSSYSFSFTV*PLMTTS Trigger: AGAAGTCGTCATCAATGGCCAGACCGTGAAACTAAA...GCTGTATGAGGATGGGCGTTTCCTGATGAAGAGGGTTACTGGGGGCATCCCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR GCA 90 bp | CAAAACGTCCTCTTGGCTATGTCCAGTAATTTGTTTTTGTTTGTCACCTGTGGTCTCACGGAGTCTTCGTaGAGGGAGTCCTGGCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: QNVLLAMSSNLFLFVTCGLTESS*RESWLA Trigger: GGCCAGCCAGGACTCCCTGCACGAAGACTCCGTGAG...ACCACAGGTGACAAACAAAAACAAATTACTGGACATAGCCAAGAGGACGTTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR TCA 90 bp | GGGTGGATTTCAATTAGTAGCTGTAACATTAGGTCCAATTTCAGTCTGGCCACCTCTGCCGGGCCATCATaGTCCTCCCGTTGCAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: GWISISSCNIRSNFSLATSAGPS*SSRCKR Trigger: TCTTTTGCAACGGGAGGATCATGATGGCCCGGCAGA...GGTGGCCAGACTGAAATTGGACCTAATGTTACAGCTACTAATTGAAATCCACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR TCA 90 bp | ACAGATCAAGAAAATAACAGAGGAGTCATTTTATTGGCTGTCCATAGGAAGGTCCGGGGATGGCAGGGGTaGTCTTCTCTGCCAGGTACC | + |
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Preference number: 4 (lower is better) Translates to: TDQENNRGVILLAVHRKVRGWQG*SSLPGT Trigger: GGTACCTGGCAGAGAAGATCACCCCTGCCATCCCCG...GACCTTCCTATGGACAGCCAATAAAATGACTCCTCTGTTATTTTCTTGATCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR GCA 90 bp | GGGTGGATTTCAATTAGTAGCTGTAACATTAGGTCCAATTTCAGTCTGGCCACCAAGCAGGGGCGTGGCTaGGGCCTGCAAAACGAATTT | + |
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Preference number: 4 (lower is better) Translates to: GWISISSCNIRSNFSLATKQGRG*GLQNEF Trigger: AAATTCGTTTTGCAGGCCGCAGCCACGCCCCTGCTT...GGTGGCCAGACTGAAATTGGACCTAATGTTACAGCTACTAATTGAAATCCACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CCA 90 bp | CAAAACGTCCTCTTGGCTATGTCCAGTAATTTGTTTTTGTTTGTCACCTGTGGTCGACTTCTTTGGTTCTaGGAGGCGGGCGATACCCCC | + |
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Preference number: 4 (lower is better) Translates to: QNVLLAMSSNLFLFVTCGRLLWF*EAGDTP Trigger: GGGGGTATCGCCCGCCTCCCAGAACCAAAGAAGTCG...ACCACAGGTGACAAACAAAAACAAATTACTGGACATAGCCAAGAGGACGTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CCA 90 bp | ACAGATCAAGAAAATAACAGAGGAGTCATTTTATTGGCTGTCCATAGGAAGGTCCCTCCGTGGCAAGGTTaGGCATGGAGGAGGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: TDQENNRGVILLAVHRKVPPWQG*AWRRVV Trigger: CACCACCCTCCTCCATGCCCAACCTTGCCACGGAGG...GACCTTCCTATGGACAGCCAATAAAATGACTCCTCTGTTATTTTCTTGATCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CCA 90 bp | AAAACGTCCTCTTGGCTATGTCCAGTAATTTGTTTTTGTTTGTCACCTGTGGTCGCAGGGAGTCCTGGCTaGCCAGACCCAACATGTGCA | + |
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Preference number: 4 (lower is better) Translates to: KTSSWLCPVICFCLSPVVAGSPG*PDPTCA Trigger: TGCACATGTTGGGTCTGGCCAGCCAGGACTCCCTGC...GACCACAGGTGACAAACAAAAACAAATTACTGGACATAGCCAAGAGGACGTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR GCA 90 bp | AAAACGTCCTCTTGGCTATGTCCAGTAATTTGTTTTTGTTTGTCACCTGTGGTCTATGTGCTAGAGGGCTaGCTGCCCCCAGCATCCTTG | + |
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Preference number: 4 (lower is better) Translates to: KTSSWLCPVICFCLSPVVYVLEG*LPPASL Trigger: CAAGGATGCTGGGGGCAGGCAGCCCTCTAGCACATA...GACCACAGGTGACAAACAAAAACAAATTACTGGACATAGCCAAGAGGACGTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR TCA 90 bp | ACATTAGGTCCAATTTCAGTCTGGCCACCAGTGTCGAAAATTTTCCTCGTGTCTGTACGTGTGGAAACCTaGAAGGCCAATGATGGACCA | + |
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Preference number: 4 (lower is better) Translates to: TLGPISVWPPVSKIFLVSVRVET*KANDGP Trigger: TGGTCCATCATTGGCCTTTCAGGTTTCCACACGTAC...AGACACGAGGAAAATTTTCGACACTGGTGGCCAGACTGAAATTGGACCTAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR GCA 90 bp | ACAGGGGATGCCCCCAGTAACCCTCTTCATCAGGAAACGCCCATCCTCATACAGGTGTGTGATAACGAATaGAAATATAAAGACTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: TGDAPSNPLHQETPILIQVCDNE*KYKDCQ Trigger: CTGACAGTCTTTATATTTGCATTCGTTATCACACAC...CTGTATGAGGATGGGCGTTTCCTGATGAAGAGGGTTACTGGGGGCATCCCCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR GCA 90 bp | ACAGATCAAGAAAATAACAGAGGAGTCATTTTATTGGCTGTCCATAGGAAGGTCGGCGTGGCTGCGGCCTaGAAAACGAATTTGGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: TDQENNRGVILLAVHRKVGVAAA*KTNLVL Trigger: GAGCACCAAATTCGTTTTGCAGGCCGCAGCCACGCC...GACCTTCCTATGGACAGCCAATAAAATGACTCCTCTGTTATTTTCTTGATCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CCA 90 bp | TTTGTTTTAATGAACAAATGGAACGGCGGGTGGATTTCAATTAGTAGCTGTAACTCTGAAGCAGGGGCGTaGCTGCGGCCTGCAAAACGA | + |
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Preference number: 4 (lower is better) Translates to: FVLMNKWNGGWISISSCNSEAGA*LRPAKR Trigger: TCGTTTTGCAGGCCGCAGCCACGCCCCTGCTTCAGA...GTTACAGCTACTAATTGAAATCCACCCGCCGTTCCATTTGTTCATTAAAACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR TCA 90 bp | AAAACGTCCTCTTGGCTATGTCCAGTAATTTGTTTTTGTTTGTCACCTGTGGTCCTGTGGGTGCTGATCTaGCTGTACTCGCAGTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTSSWLCPVICFCLSPVVLWVLI*LYSQSF Trigger: GAAAGACTGCGAGTACAGTCAGATCAGCACCCACAG...GACCACAGGTGACAAACAAAAACAAATTACTGGACATAGCCAAGAGGACGTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR TCA 90 bp | CAAAACGTCCTCTTGGCTATGTCCAGTAATTTGTTTTTGTTTGTCACCTGTGGTACCCAGGGACAGTGGTaGTCAAACTGTTCTACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QNVLLAMSSNLFLFVTCGTQGQW*SNCSTQ Trigger: CTGCGTAGAACAGTTTGATCACCACTGTCCCTGGGT...ACCACAGGTGACAAACAAAAACAAATTACTGGACATAGCCAAGAGGACGTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS-3UTR CCA 90 bp | GGCATTACCCACCGGGTTCGGTCTGTCACATTGGAAAGTATCACAAGATTAAAAATTTTCTTCTTCTTGTaGGGCGACTCCATGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GITHRVRSVTLESITRLKIFFFL*GDSMGE Trigger: CTCTCCCATGGAGTCGCCCCACAAGAAGAAGAAAAT...TTTTAATCTTGTGATACTTTCCAATGTGACAGACCGAACCCGGTGGGTAATGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CCA 90 bp | GGCATTACCCACCGGGTTCGGTCTGTCACATTGGAAAGTATCACAAGATTAAAACCTGCAAAACGAATTTaGTGCTCTGAATGCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GITHRVRSVTLESITRLKPAKRI*CSECTG Trigger: ACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGG...TTTTAATCTTGTGATACTTTCCAATGTGACAGACCGAACCCGGTGGGTAATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| 3UTR CAA 72 bp | CCGGTCCACTCTGCAGATTCCAAACAAAACGTCCTCTaGGCTATGTCCAGTAATTTGTTTTTGTTTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: PVHSADSKQNVL*AMSSNLFLFVT Trigger: GGTGACAAACAAAAACAAATTACTGGACATAGCCAAGAGGACGTTTTGTTTGGAATCTGCAGAGTGGACCGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR TCA 90 bp | GGCATTACCCACCGGGTTCGGTCTGTCACATTGGAAAGTATCACAAGATTAAAACGACACAGCAATTTGTaGAGATGTTTCCATAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GITHRVRSVTLESITRLKRHSNL*RCFHSC Trigger: ACAGCTATGGAAACATCTTCACAAATTGCTGTGTCG...TTTTAATCTTGTGATACTTTCCAATGTGACAGACCGAACCCGGTGGGTAATGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR TCA 90 bp | ACAGATCAAGAAAATAACAGAGGAGTCATTTTATTGGCTGTCCATAGGAAGGTCAACCTGAAAGGCCAATaGTGGACCAGACAGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TDQENNRGVILLAVHRKVNLKGQ*WTRQRR Trigger: TCTTCTCTGTCTGGTCCATCATTGGCCTTTCAGGTT...GACCTTCCTATGGACAGCCAATAAAATGACTCCTCTGTTATTTTCTTGATCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS-3UTR TCA 90 bp | TTGTTTCGTTTTGTTTTAATGAACAAATGGAACGGCGGGTGGATTTCAATTAGTCATAGTGATCCCATTTaGTGGTGCTGCTGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFRFVLMNKWNGGWISISHSDPI*WCCWLW Trigger: CCACAGCCAGCAGCACCATCAAATGGGATCACTATG...ACTAATTGAAATCCACCCGCCGTTCCATTTGTTCATTAAAACAAAACGAAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS-3UTR GCA 90 bp | ACAGATCAAGAAAATAACAGAGGAGTCATTTTATTGGCTGTCCATAGGAAGGTCATTTGGTGCTCTGAATaGACTGGTCTTGGTCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: TDQENNRGVILLAVHRKVIWCSE*TGLGRT Trigger: TGTGCGACCAAGACCAGTGCATTCAGAGCACCAAAT...GACCTTCCTATGGACAGCCAATAAAATGACTCCTCTGTTATTTTCTTGATCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS-3UTR CCA 90 bp | CGGGTTCGGTCTGTCACATTGGAAAGTATCACAAGATTAAAAAGAAGGAAAACATCTTCGTTTGTGGTCTaGTTGGAGCTGATCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RVRSVTLESITRLKRRKTSSFVV*LELIRY Trigger: GTACCTGATCAGCTCCAACCAGACCACAAACGAAGA...TGTTTTCCTTCTTTTTAATCTTGTGATACTTTCCAATGTGACAGACCGAACCCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| 3UTR CAA 72 bp | AAGGATGGCATTACCCACCGGGTTCGGTCTGTCACATaGGAAAGTATCACAAGATTAAAAAGAAGGAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: KDGITHRVRSVT*ESITRLKRRKT Trigger: TGTTTTCCTTCTTTTTAATCTTGTGATACTTTCCAATGTGACAGACCGAACCCGGTGGGTAATGCCATCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS-3UTR CCA 90 bp | TTGTTTCGTTTTGTTTTAATGAACAAATGGAACGGCGGGTGGATTTCAATTAGTCTGAACTGGTGCCGTTaGCTATATCTATTTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LFRFVLMNKWNGGWISISLNWCR*LYLFAF Trigger: AAAGGCAAATAGATATAGCCAACGGCACCAGTTCAG...ACTAATTGAAATCCACCCGCCGTTCCATTTGTTCATTAAAACAAAACGAAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS CCA 90 bp | GTGGCCTCCGTGGCAAGGTTGGGCATGGAGGAGGGTGGTGTGGGCTaGCCCAGCGTCAGGCTAGCACATGGGGTGCCCAGGCCGGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VASVARLGMEEGGVG*PSVRLAHGVPRPGF Trigger: GAAACCCGGCCTGGGCACCCCATGTGCTAGCCTGACGCTGGGCCAGCCCACACCACCCTCCTCCATGCCCAACCTTGCCACGGAGGCCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS CCA 90 bp | CATGGAGGAGGGTGGTGTGGGCTGGCCCAGCGTCAGGCTAGCACATaGGGTGCCCAGGCCGGGTTTCCCAGGCATATGCAGCTCTTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: HGGGWCGLAQRQAST*GAQAGFPRHMQLFA Trigger: AGCGAAGAGCTGCATATGCCTGGGAAACCCGGCCTGGGCACCCCATGTGCTAGCCTGACGCTGGGCCAGCCCACACCACCCTCCTCCATG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS TCA 90 bp | TCTTCTTCTTGTGGGGCGACTCCATGGGAGAGGAGCTGTGGGTGCTaGTCTGACTGTACTCGCAGTCTTTCATGGGCCCGCCGCCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSCGATPWERSCGC*SDCTRSLSWARRRR Trigger: CCGGCGGCGGCGGGCCCATGAAAGACTGCGAGTACAGTCAGATCAGCACCCACAGCTCCTCTCCCATGGAGTCGCCCCACAAGAAGAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS GCA 90 bp | ACGGAGTCTTCGTGCAGGGAGTCCTGGCTGGCCAGACCCAACATGTaGATGGTACGGCTATGTGCTAGAGGGCTGCCTGCCCCCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: TESSCRESWLARPNM*MVRLCARGLPAPSI Trigger: GATGCTGGGGGCAGGCAGCCCTCTAGCACATAGCCGTACCATGCACATGTTGGGTCTGGCCAGCCAGGACTCCCTGCACGAAGACTCCGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS TCA 90 bp | TTCCCAGGCATATGCAGCTCTTCGCTGGTGAGGCTGGGCTCGCTCTaGAGCAGGGGCGTGGCTGCGGCCTGCAAAACGAATTTGGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FPGICSSSLVRLGSL*SRGVAAACKTNLVL Trigger: GAGCACCAAATTCGTTTTGCAGGCCGCAGCCACGCCCCTGCTTCAGAGCGAGCCCAGCCTCACCAGCGAAGAGCTGCATATGCCTGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS GCA 90 bp | GCAGGGGCGTGGCTGCGGCCTGCAAAACGAATTTGGTGCTCTGAATaGACTGGTCTTGGTCGCACATGTCACTCTGCGACTGTGTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AGAWLRPAKRIWCSE*TGLGRTCHSATVWP Trigger: GGGCCACACAGTCGCAGAGTGACATGTGCGACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCCGCAGCCACGCCCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS GCA 90 bp | CTCTTCGCTGGTGAGGCTGGGCTCGCTCTGAAGCAGGGGCGTGGCTaGGGCCTGCAAAACGAATTTGGTGCTCTGAATGCACTGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LFAGEAGLALKQGRG*GLQNEFGALNALVL Trigger: CAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCCGCAGCCACGCCCCTGCTTCAGAGCGAGCCCAGCCTCACCAGCGAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS CCA 90 bp | GCTTTACCAAGCCCCTCACGGAGTCTTCGTGCAGGGAGTCCTGGCTaGCCAGACCCAACATGTGCATGGTACGGCTATGTGCTAGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ALPSPSRSLRAGSPG*PDPTCAWYGYVLEG Trigger: GCCCTCTAGCACATAGCCGTACCATGCACATGTTGGGTCTGGCCAGCCAGGACTCCCTGCACGAAGACTCCGTGAGGGGCTTGGTAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS TCA 90 bp | CAGCGGCTTCATCAGGAGTGGCTCGAGGGAGGACTCCCGGGTCACTaGAGCTGGTCCGAAGCAGTGTCCCCATCACAAAGAAGAACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QRLHQEWLEGGLPGH*SWSEAVSPSQRRTG Trigger: TCCTGTTCTTCTTTGTGATGGGGACACTGCTTCGGACCAGCTTCAGTGACCCGGGAGTCCTCCCTCGAGCCACTCCTGATGAAGCCGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS CCA 90 bp | GCTCGCTCTGAAGCAGGGGCGTGGCTGCGGCCTGCAAAACGAATTTaGTGCTCTGAATGCACTGGTCTTGGTCGCACATGTCACTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: ARSEAGAWLRPAKRI*CSECTGLGRTCHSA Trigger: CGCAGAGTGACATGTGCGACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCCGCAGCCACGCCCCTGCTTCAGAGCGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS GCA 90 bp | CGCTCTGAAGCAGGGGCGTGGCTGCGGCCTGCAAAACGAATTTGGTaGTCTGAATGCACTGGTCTTGGTCGCACATGTCACTCTGCGACT | + |
|
Preference number: 5 (lower is better) Translates to: RSEAGAWLRPAKRIW*SECTGLGRTCHSAT Trigger: AGTCGCAGAGTGACATGTGCGACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCCGCAGCCACGCCCCTGCTTCAGAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS CCA 90 bp | CTGAGCTTTACCAAGCCCCTCACGGAGTCTTCGTGCAGGGAGTCCTaGCTGGCCAGACCCAACATGTGCATGGTACGGCTATGTGCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSFTKPLTESSCRES*LARPNMCMVRLCAR Trigger: TCTAGCACATAGCCGTACCATGCACATGTTGGGTCTGGCCAGCCAGGACTCCCTGCACGAAGACTCCGTGAGGGGCTTGGTAAAGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS TCA 90 bp | TCACAAAGAAGAACAGGATGCCACCGACCACGGGGATGGCAGGGGTaGTCTTCTCTGCCAGGTACCGACAGTCGAAGGCGAAGAAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SQRRTGCHRPRGWQG*SSLPGTDSRRRRRV Trigger: GACTCTTCTTCGCCTTCGACTGTCGGTACCTGGCAGAGAAGATCACCCCTGCCATCCCCGTGGTCGGTGGCATCCTGTTCTTCTTTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CAA 90 bp | GTGCCGTCTGCAACAGGGGATGCCCCCAGTAACCCTCTTCATCAGGAAACGCCCGTTGGCTATATCTATTaGCCTTTCCAGATCAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VPSATGDAPSNPLHQETPVGYIY*PFQISG Trigger: GCCGCTGATCTGGAAAGGCAAATAGATATAGCCAAC...GGGCGTTTCCTGATGAAGAGGGTTACTGGGGGCATCCCCTGTTGCAGACGGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CAA 90 bp | CAGGGGATGCCCCCAGTAACCCTCTTCATCAGGAAACGCCCATCCTCATACAGCTCGTTTGTGGTCTGGTaGGAGCTGATCAGGTACGTG | + |
|
Preference number: 5 (lower is better) Translates to: QGMPPVTLFIRKRPSSYSSFVVW*ELIRYV Trigger: CACGTACCTGATCAGCTCCAACCAGACCACAAACGA...GCTGTATGAGGATGGGCGTTTCCTGATGAAGAGGGTTACTGGGGGCATCCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CAA 90 bp | ACAGGGGATGCCCCCAGTAACCCTCTTCATCAGGAAACGCCCATCCTCATACAGCCTGAACTGGTGCCGTaGGCTATATCTATTTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TGDAPSNPLHQETPILIQPELVP*AISICL Trigger: AAGGCAAATAGATATAGCCAACGGCACCAGTTCAGG...CTGTATGAGGATGGGCGTTTCCTGATGAAGAGGGTTACTGGGGGCATCCCCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CAA 90 bp | CGGGTTCGGTCTGTCACATTGGAAAGTATCACAAGATTAAAAAGAAGGAAAACAGCCTCCGTGGCAAGGTaGGGCATGGAGGAGGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RVRSVTLESITRLKRRKTASVAR*GMEEGG Trigger: ACCACCCTCCTCCATGCCCAACCTTGCCACGGAGGC...TGTTTTCCTTCTTTTTAATCTTGTGATACTTTCCAATGTGACAGACCGAACCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CAA 90 bp | ATTAGGTCCAATTTCAGTCTGGCCACCAGTGTCGAAAATTTTCCTCGTGTCTGTTTGATGACGACTTCTTaGGTTCTGGGAGGCGGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: IRSNFSLATSVENFPRVCLMTTS*VLGGGR Trigger: TCGCCCGCCTCCCAGAACCAAAGAAGTCGTCATCAA...ACAGACACGAGGAAAATTTTCGACACTGGTGGCCAGACTGAAATTGGACCTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CAA 90 bp | TCCTCTTGGCTATGTCCAGTAATTTGTTTTTGTTTGTCACCTGTGGTCCCCAGGTTCACGGTCTGGCCATaGATGACGACTTCTTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSWLCPVICFCLSPVVPRFTVWP*MTTSLV Trigger: AACCAAAGAAGTCGTCATCAATGGCCAGACCGTGAA...CCTGGGGACCACAGGTGACAAACAAAAACAAATTACTGGACATAGCCAAGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CAA 90 bp | CAAAACGTCCTCTTGGCTATGTCCAGTAATTTGTTTTTGTTTGTCACCTGTGGTCTGAATGCACTGGTCTaGGTCGCACATGTCACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QNVLLAMSSNLFLFVTCGLNALV*VAHVTL Trigger: CAGAGTGACATGTGCGACCAAGACCAGTGCATTCAG...ACCACAGGTGACAAACAAAAACAAATTACTGGACATAGCCAAGAGGACGTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CAA 90 bp | ACAGATCAAGAAAATAACAGAGGAGTCATTTTATTGGCTGTCCATAGGAAGGTCGCGATTTTCTTCTTCTaGTGGGGCGACTCCATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TDQENNRGVILLAVHRKVAIFFF*WGDSMG Trigger: TCCCATGGAGTCGCCCCACAAGAAGAAGAAAATCGC...GACCTTCCTATGGACAGCCAATAAAATGACTCCTCTGTTATTTTCTTGATCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CAA 90 bp | ATTAGGTCCAATTTCAGTCTGGCCACCAGTGTCGAAAATTTTCCTCGTGTCTGTATCATGATCCTCCCGTaGCAAAAGAACTTGTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: IRSNFSLATSVENFPRVCIMILP*QKNLFL Trigger: AAGAAACAAGTTCTTTTGCAACGGGAGGATCATGAT...ACAGACACGAGGAAAATTTTCGACACTGGTGGCCAGACTGAAATTGGACCTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS-3UTR CAA 90 bp | ATTAGGTCCAATTTCAGTCTGGCCACCAGTGTCGAAAATTTTCCTCGTGTCTGTTCTTTACCTCTTTTATaGGACCAAGAGCCTTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: IRSNFSLATSVENFPRVCSLPLL*DQEPLM Trigger: CATCAAAGGCTCTTGGTCCAATAAAAGAGGTAAAGA...ACAGACACGAGGAAAATTTTCGACACTGGTGGCCAGACTGAAATTGGACCTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS CCA 72 bp | TGTCTGAGAGTGTGGCCTCCGTGGCAAGGTTGGGCATaGAGGAGGGTGGTGTGGGCTGGCCCAGCGTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: CLRVWPPWQGWA*RRVVWAGPASG Trigger: GCCTGACGCTGGGCCAGCCCACACCACCCTCCTCCATGCCCAACCTTGCCACGGAGGCCACACTCTCAGACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS GCA 72 bp | GCCACCGACCACGGGGATGGCAGGGGTGATCTTCTCTaGCAGGTACCGACAGTCGAAGGCGAAGAAGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ATDHGDGRGDLL*QVPTVEGEEES Trigger: GGACTCTTCTTCGCCTTCGACTGTCGGTACCTGGCAGAGAAGATCACCCCTGCCATCCCCGTGGTCGGTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS GCA 72 bp | TCGTGCAGGGAGTCCTGGCTGGCCAGACCCAACATGTaGATGGTACGGCTATGTGCTAGAGGGCTGCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SCRESWLARPNM*MVRLCARGLPA Trigger: GGCAGGCAGCCCTCTAGCACATAGCCGTACCATGCACATGTTGGGTCTGGCCAGCCAGGACTCCCTGCACGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS CAA 72 bp | GGCTATGTGCTAGAGGGCTGCCTGCCCCCAGCATCCTaGGCGGTGAGGGTGCCTCATCTGGGGTCAGAAACT | + |
|
Preference number: 6 (lower is better) Translates to: GYVLEGCLPPAS*AVRVPHLGSET Trigger: AGTTTCTGACCCCAGATGAGGCACCCTCACCGCCAAGGATGCTGGGGGCAGGCAGCCCTCTAGCACATAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS TCA 72 bp | TGTGGGGCGACTCCATGGGAGAGGAGCTGTGGGTGCTaGTCTGACTGTACTCGCAGTCTTTCATGGGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: CGATPWERSCGC*SDCTRSLSWAR Trigger: GCGGGCCCATGAAAGACTGCGAGTACAGTCAGATCAGCACCCACAGCTCCTCTCCCATGGAGTCGCCCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS TCA 72 bp | AGAACAGGATGCCACCGACCACGGGGATGGCAGGGGTaGTCTTCTCTGCCAGGTACCGACAGTCGAAGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: RTGCHRPRGWQG*SSLPGTDSRRR Trigger: TCGCCTTCGACTGTCGGTACCTGGCAGAGAAGATCACCCCTGCCATCCCCGTGGTCGGTGGCATCCTGTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS TCA 72 bp | ATATGCAGCTCTTCGCTGGTGAGGCTGGGCTCGCTCTaGAGCAGGGGCGTGGCTGCGGCCTGCAAAACGAAT | + |
|
Preference number: 6 (lower is better) Translates to: ICSSSLVRLGSL*SRGVAAACKTN Trigger: ATTCGTTTTGCAGGCCGCAGCCACGCCCCTGCTTCAGAGCGAGCCCAGCCTCACCAGCGAAGAGCTGCATAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS GCA 72 bp | GAGCTGAGCTTTACCAAGCCCCTCACGGAGTCTTCGTaGAGGGAGTCCTGGCTGGCCAGACCCAACATGTGC | + |
|
Preference number: 6 (lower is better) Translates to: ELSFTKPLTESS*RESWLARPNMC Trigger: GCACATGTTGGGTCTGGCCAGCCAGGACTCCCTGCACGAAGACTCCGTGAGGGGCTTGGTAAAGCTCAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS CCA 72 bp | AGCCCCTCACGGAGTCTTCGTGCAGGGAGTCCTGGCTaGCCAGACCCAACATGTGCATGGTACGGCTATGTG | + |
|
Preference number: 6 (lower is better) Translates to: SPSRSLRAGSPG*PDPTCAWYGYV Trigger: CACATAGCCGTACCATGCACATGTTGGGTCTGGCCAGCCAGGACTCCCTGCACGAAGACTCCGTGAGGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS CCA 72 bp | ACCAAGCCCCTCACGGAGTCTTCGTGCAGGGAGTCCTaGCTGGCCAGACCCAACATGTGCATGGTACGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: TKPLTESSCRES*LARPNMCMVRL Trigger: TAGCCGTACCATGCACATGTTGGGTCTGGCCAGCCAGGACTCCCTGCACGAAGACTCCGTGAGGGGCTTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS TCA 72 bp | CATCAGGAGTGGCTCGAGGGAGGACTCCCGGGTCACTaGAGCTGGTCCGAAGCAGTGTCCCCATCACAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: HQEWLEGGLPGH*SWSEAVSPSQR Trigger: TCTTTGTGATGGGGACACTGCTTCGGACCAGCTTCAGTGACCCGGGAGTCCTCCCTCGAGCCACTCCTGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS CAA 72 bp | ACCTCCCATTTCCTCCGGGCCGCGATTTTCTTCTTCTaGTGGGGCGACTCCATGGGAGAGGAGCTGTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TSHFLRAAIFFF*WGDSMGEELWV Trigger: CACCCACAGCTCCTCTCCCATGGAGTCGCCCCACAAGAAGAAGAAAATCGCGGCCCGGAGGAAATGGGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS TCA 72 bp | GGCGTGGCTGCGGCCTGCAAAACGAATTTGGTGCTCTaGATGCACTGGTCTTGGTCGCACATGTCACTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GVAAACKTNLVL*MHWSWSHMSLC Trigger: GCAGAGTGACATGTGCGACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCCGCAGCCACGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
||
| CDS CCA 72 bp | GAAGCAGGGGCGTGGCTGCGGCCTGCAAAACGAATTTaGTGCTCTGAATGCACTGGTCTTGGTCGCACATGT | + |
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Preference number: 6 (lower is better) Translates to: EAGAWLRPAKRI*CSECTGLGRTC Trigger: ACATGTGCGACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCCGCAGCCACGCCCCTGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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| CDS GCA 72 bp | TGGCTGCGGCCTGCAAAACGAATTTGGTGCTCTGAATaGACTGGTCTTGGTCGCACATGTCACTCTGCGACT | + |
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Preference number: 6 (lower is better) Translates to: WLRPAKRIWCSE*TGLGRTCHSAT Trigger: AGTCGCAGAGTGACATGTGCGACCAAGACCAGTGCATTCAGAGCACCAAATTCGTTTTGCAGGCCGCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089185.6 |
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