Pregenerated sensors for ZDHHC13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030471Ensembl transcript IDs: ENSMUST00000118927.8, ENSMUST00000125280.8
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | TCTGACGGAAGGTCCACTCTTGCTGAAGACTGTATCCCTTATCCTTaGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGA | + |
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Preference number: 2 (lower is better) Translates to: SDGRSTLAEDCIPYP*TVVAEYLTSLSAIR Trigger: TCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATAAGGGATACAGTCTTCAGCAAGAGTGGACCTTCCGTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR TCA 90 bp | TTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCAGCATGGGAGCCATGGCTGTaGTTCCTGCACTGCGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LTVVAEYLTSLSAIRAPAWEPWL*FLHCEP Trigger: GGGCTCGCAGTGCAGGAATCACAGCCATGGCTCCCA...TGCTGGTGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR GCA 90 bp | TTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCAGCACATGGCTGTGATTCCTaGACTGCGAGCCCAGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: LTVVAEYLTSLSAIRAPAHGCDS*TASPGP Trigger: CGGGCCTGGGCTCGCAGTGCAGGAATCACAGCCATG...TGCTGGTGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR GCA 90 bp | TGTATCCCTTATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAGAGCCACACAGGAGTTaGACACGTGGCAATGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: CIPYPLTVVAEYLTSLSAEPHRS*TRGNGV Trigger: CACTCCATTGCCACGTGTGCAACTCCTGTGTGGCTC...TGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATAAGGGATACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CCA 90 bp | TTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCAGCAAACAGGACCGCCAGATaGATGCTGCTGAATCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LTVVAEYLTSLSAIRAPANRTAR*MLLNPS Trigger: AGAGGGATTCAGCAGCATCCATCTGGCGGTCCTGTT...TGCTGGTGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR TCA 90 bp | TGTATCCCTTATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAGTCCAAAAGCAGTGCTaGTCAAAGCGAGCCACACAG | + |
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Preference number: 4 (lower is better) Translates to: CIPYPLTVVAEYLTSLSAVQKQC*SKRATQ Trigger: CTGTGTGGCTCGCTTTGATCAGCACTGCTTTTGGAC...TGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATAAGGGATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR TCA 90 bp | TTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCAGCATGTCGGATGGCCCAGTaGAGAGGAGTTGAATTTAGG | + |
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Preference number: 4 (lower is better) Translates to: LTVVAEYLTSLSAIRAPACRMAQ*RGVEFR Trigger: CCTAAATTCAACTCCTCTTCACTGGGCCATCCGACA...TGCTGGTGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR TCA 90 bp | TTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCAGCACCAAAGCAGCCACACTaGAAGAAATCTGCCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTVVAEYLTSLSAIRAPAPKQPH*KKSARF Trigger: GAACCTGGCAGATTTCTTTCAGTGTGGCTGCTTTGG...TGCTGGTGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR GCA 90 bp | TGTATCCCTTATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAGTGGGGTCTGCACCGTaGTGGAGCAATAATATGACC | + |
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Preference number: 4 (lower is better) Translates to: CIPYPLTVVAEYLTSLSAVGSAP*WSNNMT Trigger: GGTCATATTATTGCTCCAGCACGGTGCAGACCCCAC...TGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATAAGGGATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CCA 90 bp | TATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACTCCATCAATCAGAGTaGGGTCTGCACCGTGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: YPLTVVAEYLTSLSAIRALHQSE*GLHRAG Trigger: TCCAGCACGGTGCAGACCCCACTCTGATTGATGGAG...TGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR TCA 90 bp | TGTATCCCTTATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAGCGGCGTCTGTCCATTaGCATCTGTCATATTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: CIPYPLTVVAEYLTSLSAAASVH*HLSYSH Trigger: GTGTGAATATGACAGATGTCAATGGACAGACGCCGC...TGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATAAGGGATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR TCA 90 bp | TTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCAGCACAGTCTCTGCTAGGGTaGCGATATTCACTTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTVVAEYLTSLSAIRAPAQSLLG*RYSLSS Trigger: AGAGGAAAGTGAATATCGTCACCCTAGCAGAGACTG...TGCTGGTGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR TCA 90 bp | TGTATCCCTTATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAAGGTCACCACCCAACTaGTCTATCACAGCACCTTTG | + |
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Preference number: 4 (lower is better) Translates to: CIPYPLTVVAEYLTSLSARSPPN*SITAPL Trigger: CAAAGGTGCTGTGATAGATCAGTTGGGTGGTGACCT...TGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATAAGGGATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR TCA 90 bp | TGTATCCCTTATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAGGGATGTCCAATCTATaGTGCAGGGCTTCACTAAGC | + |
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Preference number: 4 (lower is better) Translates to: CIPYPLTVVAEYLTSLSAGMSNL*CRASLS Trigger: GCTTAGTGAAGCCCTGCATCATAGATTGGACATCCC...TGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATAAGGGATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR GCA 90 bp | TTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCAGCAATTTCCTGCTGCAACTaGCCAGTGAAGAGGAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LTVVAEYLTSLSAIRAPAISCCN*PVKRSV Trigger: AACACTCCTCTTCACTGGGCAGTTGCAGCAGGAAAT...TGCTGGTGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CCA 90 bp | TTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCAGCAAGCCTTAGTGAAGCCTaGATCAGTTGCCCAAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: LTVVAEYLTSLSAIRAPASLSEA*ISCPSL Trigger: AAGACTTGGGCAACTGATCCAGGCTTCACTAAGGCT...TGCTGGTGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CCA 90 bp | TATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCAAATGCCCTTGTCGGATaGCCCAGTGAAGAGGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YPLTVVAEYLTSLSAIRANALVG*PSEEEL Trigger: CAACTCCTCTTCACTGGGCCATCCGACAAGGGCATT...TGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CCA 90 bp | TTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCAGCAGGGTCTGCACCGTGCTaGAGCAATAATATGACCATA | + |
|
Preference number: 4 (lower is better) Translates to: LTVVAEYLTSLSAIRAPAGSAPC*SNNMTI Trigger: TATGGTCATATTATTGCTCCAGCACGGTGCAGACCC...TGCTGGTGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR TCA 90 bp | TGTATCCCTTATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAGCTTATCAACTGCACTaGCATTTCCTGCTGCAACTG | + |
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Preference number: 4 (lower is better) Translates to: CIPYPLTVVAEYLTSLSAAYQLH*HFLLQL Trigger: CAGTTGCAGCAGGAAATGTCAGTGCAGTTGATAAGC...TGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATAAGGGATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR TCA 90 bp | TTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCAGCACTCTGTCTGGTTGTCTaGCATCATATCCTGCTTCTA | + |
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Preference number: 4 (lower is better) Translates to: LTVVAEYLTSLSAIRAPALCLVV*HHILLL Trigger: TAGAAGCAGGATATGATGTCAGACAACCAGACAGAG...TGCTGGTGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CCA 90 bp | TGTATCCCTTATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCACTGGGTGGAAAACCATaGTGTACTGGGATGTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CIPYPLTVVAEYLTSLSALGGKP*CTGMSN Trigger: ATTGGACATCCCAGTACACCATGGTTTTCCACCCAG...TGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATAAGGGATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CCA 90 bp | TGTATCCCTTATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCATTCTCTTTGGCTGGGTaGAAAACCATGGTGTACTGG | + |
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Preference number: 4 (lower is better) Translates to: CIPYPLTVVAEYLTSLSAFSLAG*KTMVYW Trigger: CCAGTACACCATGGTTTTCCACCCAGCCAAAGAGAA...TGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATAAGGGATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR TCA 90 bp | TGTATCCCTTATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATGTGCAAAATGTTCTaGAGTCCAGAGAGCCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: CIPYPLTVVAEYLTSLSAMCKMF*SPESQS Trigger: AGACTGGCTCTCTGGACTTCAGAACATTTTGCACAT...TGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATAAGGGATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR TCA 90 bp | TTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCAGCATGTATGGTGTTTTCCTaGGGGACAATGTCTGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: LTVVAEYLTSLSAIRAPACMVFS*GTMSVS Trigger: TGAAACAGACATTGTCCCTCAGGAAAACACCATACA...TGCTGGTGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR GCA 90 bp | TTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCAGCAGAAGCCTGGATCAGTTaGCCAAGTCTTGTAGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: LTVVAEYLTSLSAIRAPAEAWIS*PSLVEK Trigger: TTTTTCTACAAGACTTGGGCAACTGATCCAGGCTTC...TGCTGGTGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CCA 90 bp | TTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCAGCATCCAGTCACATACCATaGAAAGGGAAAGCAAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: LTVVAEYLTSLSAIRAPASSHIP*KGKARR Trigger: TCTTCTTGCTTTCCCTTTCCATGGTATGTGACTGGA...TGCTGGTGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CCA 90 bp | TATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCAAGGCTGATTCTCTCATaGGAGGTTAGGCCCAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: YPLTVVAEYLTSLSAIRARLILS*EVRPRN Trigger: ATTTCTGGGCCTAACCTCCCATGAGAGAATCAGCCT...TGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CCA 90 bp | TGTATCCCTTATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAGAATCCGAGGTTGTATaGTGTTTTCCTGAGGGACAA | + |
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Preference number: 4 (lower is better) Translates to: CIPYPLTVVAEYLTSLSAESEVV*CFPEGQ Trigger: TTGTCCCTCAGGAAAACACCATACAACCTCGGATTC...TGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATAAGGGATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CCA 90 bp | TGTATCCCTTATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAGACTTTCTCTTTGGCTaGGTGGAAAACCATGGTGTA | + |
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Preference number: 4 (lower is better) Translates to: CIPYPLTVVAEYLTSLSADFLFG*VENHGV Trigger: TACACCATGGTTTTCCACCCAGCCAAAGAGAAAGTC...TGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATAAGGGATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR TCA 90 bp | TGTATCCCTTATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCATTAATGGCAGCCCAGTaGAGAAGAGACACATTTTCT | + |
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Preference number: 4 (lower is better) Translates to: CIPYPLTVVAEYLTSLSALMAAQ*RRDTFS Trigger: AGAAAATGTGTCTCTTCTTCACTGGGCTGCCATTAA...TGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATAAGGGATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR GCA 90 bp | TTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCAGCATCTGACATCATATCCTaGTTCTACCAGCTCTTTACA | + |
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Preference number: 4 (lower is better) Translates to: LTVVAEYLTSLSAIRAPASDIIS*FYQLFT Trigger: TGTAAAGAGCTGGTAGAAGCAGGATATGATGTCAGA...TGCTGGTGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR GCA 90 bp | TGTATCCCTTATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAACACTGAAAGAAATCTaGCAGGTTCTGTGTGAATCC | + |
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Preference number: 4 (lower is better) Translates to: CIPYPLTVVAEYLTSLSATLKEI*QVLCES Trigger: GGATTCACACAGAACCTGGCAGATTTCTTTCAGTGT...TGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATAAGGGATACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CCA 90 bp | TTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCAGCAAAATCCAGTTGGTTCTaGCCCAATTACTTTGTAAGC | + |
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Preference number: 4 (lower is better) Translates to: LTVVAEYLTSLSAIRAPAKSSWF*PNYFVS Trigger: GCTTACAAAGTAATTGGGCCAGAACCAACTGGATTT...TGCTGGTGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CCA 90 bp | TATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCATTGCACACGTGGCAATaGAGTGATCTTAAAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: YPLTVVAEYLTSLSAIRALHTWQ*SDLKGF Trigger: GAAGCCTTTAAGATCACTCCATTGCCACGTGTGCAA...TGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CCA 90 bp | TTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCAGCAAAAACCATGGTGTACTaGGATGTCCAATCTATGATG | + |
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Preference number: 4 (lower is better) Translates to: LTVVAEYLTSLSAIRAPAKTMVY*DVQSMM Trigger: CATCATAGATTGGACATCCCAGTACACCATGGTTTT...TGCTGGTGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR TCA 90 bp | TATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCAGCCAAGAATCTGAATTaGAGTCCAGGATGTATCCAA | + |
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Preference number: 4 (lower is better) Translates to: YPLTVVAEYLTSLSAIRAAKNLN*SPGCIQ Trigger: TTGGATACATCCTGGACTTCAATTCAGATTCTTGGC...TGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR TCA 90 bp | TATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACGAAAGATCCATATATaGTCCAGTCACATACCATGG | + |
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Preference number: 4 (lower is better) Translates to: YPLTVVAEYLTSLSAIRARKIHI*SSHIPW Trigger: CCATGGTATGTGACTGGATCATATATGGATCTTTCG...TGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR GCA 90 bp | TATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACAAAAGCTTATCAACTaGACTGACATTTCCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: YPLTVVAEYLTSLSAIRAQKLIN*TDISCC Trigger: GCAGCAGGAAATGTCAGTGCAGTTGATAAGCTTTTG...TGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CCA 90 bp | TTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCAGCAGCCAACCAAAAACCTTaGAAACAAAGATGTCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: LTVVAEYLTSLSAIRAPAANQKP*KQRCQK Trigger: TTTCTGACATCTTTGTTTCCAAGGTTTTTGGTTGGC...TGCTGGTGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR TCA 90 bp | TATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCAATAGTCCATCTTCCTTaGATGTTGTGGCACAATGAT | + |
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Preference number: 4 (lower is better) Translates to: YPLTVVAEYLTSLSAIRAIVHLP*MLWHND Trigger: ATCATTGTGCCACAACATTCAAGGAAGATGGACTAT...TGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CCA 90 bp | TATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACACATTTTCTCTGTCTaGTTGTCTGACATCATATCC | + |
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Preference number: 4 (lower is better) Translates to: YPLTVVAEYLTSLSAIRAHIFSV*LSDIIS Trigger: GGATATGATGTCAGACAACCAGACAGAGAAAATGTG...TGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS CCA 90 bp | AAGTTCTTTGTTTTCATGTACACAGATGCCGTGTCGCCCAAATCCTaGAACGTGGGAGCCATGGCTGTGATTCCTGCACTGCGAGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: KFFVFMYTDAVSPKS*NVGAMAVIPALRAQ Trigger: CTGGGCTCGCAGTGCAGGAATCACAGCCATGGCTCCCACGTTCCAGGATTTGGGCGACACGGCATCTGTGTACATGAAAACAAAGAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS TCA 90 bp | ACACTCTGTCCCTTTGAGATGAGATACGCTATGATGGGCATGTGCTaGAACAGGACCGCCAGATGGATGCTGCTGAATCCCTCTCCATCA | + |
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Preference number: 5 (lower is better) Translates to: TLCPFEMRYAMMGMC*NRTARWMLLNPSPS Trigger: TGATGGAGAGGGATTCAGCAGCATCCATCTGGCGGTCCTGTTTCAGCACATGCCCATCATAGCGTATCTCATCTCAAAGGGACAGAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118927.8 ENSMUST00000125280.8 |
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| CDS-3UTR CAA 90 bp | TTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCAGCACGAGCCACACAGGAGTaGCACACGTGGCAATGGAGT | + |
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Preference number: 5 (lower is better) Translates to: LTVVAEYLTSLSAIRAPARATQE*HTWQWS Trigger: ACTCCATTGCCACGTGTGCAACTCCTGTGTGGCTCG...TGCTGGTGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS TCA 90 bp | GTCCAATCTATGATGCAGGGCTTCACTAAGCCAAAGCAGCCACACTaGAAGAAATCTGCCAGGTTCTGTGTGAATCCGAGGTTGTATGGT | + |
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Preference number: 5 (lower is better) Translates to: VQSMMQGFTKPKQPH*KKSARFCVNPRLYG Trigger: ACCATACAACCTCGGATTCACACAGAACCTGGCAGATTTCTTTCAGTGTGGCTGCTTTGGCTTAGTGAAGCCCTGCATCATAGATTGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CAA 90 bp | TTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCAGCAAGCCGAAACTGTTTGTaGGCTCTCATCTTGGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: LTVVAEYLTSLSAIRAPASRNCL*ALILAS Trigger: AGAGGCCAAGATGAGAGCCAACAAACAGTTTCGGCT...TGCTGGTGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS GCA 90 bp | TATGGTGTTTTCCTGAGGGACAATGTCTGTTTCATGTGCCTGCTTTaGTTTAAGAGGCTGATTCTCTCATGGGAGGTTAGGCCCAGAAAT | + |
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Preference number: 5 (lower is better) Translates to: YGVFLRDNVCFMCLL*FKRLILSWEVRPRN Trigger: ATTTCTGGGCCTAACCTCCCATGAGAGAATCAGCCTCTTAAAGCAAAGCAGGCACATGAAACAGACATTGTCCCTCAGGAAAACACCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CAA 90 bp | TTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCAGCAAGCGGCGTCTGTCCATaGACATCTGTCATATTCACA | + |
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Preference number: 5 (lower is better) Translates to: LTVVAEYLTSLSAIRAPASGVCP*TSVIFT Trigger: TGTGAATATGACAGATGTCAATGGACAGACGCCGCT...TGCTGGTGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CAA 90 bp | TGTATCCCTTATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCACAAAGCCGAAACTGTTaGTTGGCTCTCATCTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: CIPYPLTVVAEYLTSLSAQSRNC*LALILA Trigger: GGCCAAGATGAGAGCCAACAAACAGTTTCGGCTTTG...TGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATAAGGGATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CAA 90 bp | TGTATCCCTTATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCACGAAGGACTTTCTCTTaGGCTGGGTGGAAAACCATG | + |
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Preference number: 5 (lower is better) Translates to: CIPYPLTVVAEYLTSLSARRTFS*AGWKTM Trigger: CATGGTTTTCCACCCAGCCAAAGAGAAAGTCCTTCG...TGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATAAGGGATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CAA 90 bp | TATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCCAGTGAAGAGGAGTaGAATTTAGGTCACCACCCA | + |
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Preference number: 5 (lower is better) Translates to: YPLTVVAEYLTSLSAIRAPSEEE*NLGHHP Trigger: TGGGTGGTGACCTAAATTCAACTCCTCTTCACTGGG...TGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CAA 90 bp | TATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCATTGTTGGCTCTCATCTaGGCCTCTGTTCTTAGCATG | + |
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Preference number: 5 (lower is better) Translates to: YPLTVVAEYLTSLSAIRALLALI*ASVLSM Trigger: CATGCTAAGAACAGAGGCCAAGATGAGAGCCAACAA...TGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CAA 90 bp | TTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCAGCAAGCCAAGAATCTGAATaGAAGTCCAGGATGTATCCA | + |
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Preference number: 5 (lower is better) Translates to: LTVVAEYLTSLSAIRAPASQESE*KSRMYP Trigger: TGGATACATCCTGGACTTCAATTCAGATTCTTGGCT...TGCTGGTGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS TCA 90 bp | CGAAACTGTTTGTTGGCTCTCATCTTGGCCTCTGTTCTTAGCATGTaGCTAATGAGCTGGTTTTTACTTTGTAGAGCCATATCAAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: RNCLLALILASVLSM*LMSWFLLCRAISRG Trigger: ACCTCTTGATATGGCTCTACAAAGTAAAAACCAGCTCATTAGTCACATGCTAAGAACAGAGGCCAAGATGAGAGCCAACAAACAGTTTCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118927.8 ENSMUST00000125280.8 |
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| CDS-3UTR CAA 90 bp | TGTATCCCTTATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATTTTCTCTGTCTGGTaGTCTGACATCATATCCTGC | + |
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Preference number: 5 (lower is better) Translates to: CIPYPLTVVAEYLTSLSAIFSVW*SDIISC Trigger: GCAGGATATGATGTCAGACAACCAGACAGAGAAAAT...TGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATAAGGGATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CAA 90 bp | TGTATCCCTTATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAAGCCAACCAAAAACCTaGGAAACAAAGATGTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: CIPYPLTVVAEYLTSLSASQPKT*ETKMSE Trigger: TTCTGACATCTTTGTTTCCAAGGTTTTTGGTTGGCT...TGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATAAGGGATACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CAA 90 bp | TTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCAGCAGCTTTTGCAAGTTCTTaGTTTTCATGTACACAGATG | + |
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Preference number: 5 (lower is better) Translates to: LTVVAEYLTSLSAIRAPAAFASS*FSCTQM Trigger: CATCTGTGTACATGAAAACAAAGAACTTGCAAAAGC...TGCTGGTGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CAA 90 bp | TATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCACCATATTGTGTAGCTTaGACAATGTCACAGTTACTC | + |
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Preference number: 5 (lower is better) Translates to: YPLTVVAEYLTSLSAIRAPYCVA*TMSQLL Trigger: GAGTAACTGTGACATTGTCAAAGCTACACAATATGG...TGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS-3UTR CAA 90 bp | TATCCTTTGACCGTGGTAGCTGAATATCTCACTTCACTTTCAGCAATAAGAGCATTAAAAGAAATCCAGTaGGTTCTGGCCCAATTACTT | + |
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Preference number: 5 (lower is better) Translates to: YPLTVVAEYLTSLSAIRALKEIQ*VLAQLL Trigger: AAGTAATTGGGCCAGAACCAACTGGATTTCTTTTAA...TGCTCTTATTGCTGAAAGTGAAGTGAGATATTCAGCTACCACGGTCAAAGGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS TCA 72 bp | TGTCGCCCAAATCCTGGAACGTGGGAGCCATGGCTGTaGTTCCTGCACTGCGAGCCCAGGCCCGGGCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: CRPNPGTWEPWL*FLHCEPRPGPS Trigger: GGAGGGCCCGGGCCTGGGCTCGCAGTGCAGGAATCACAGCCATGGCTCCCACGTTCCAGGATTTGGGCGACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS TCA 72 bp | CCAAAACCTATGCAGCGTCCAGTCCAAAAGCAGTGCTaGTCAAAGCGAGCCACACAGGAGTTGCACACGTGG | + |
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Preference number: 6 (lower is better) Translates to: PKPMQRPVQKQC*SKRATQELHTW Trigger: CCACGTGTGCAACTCCTGTGTGGCTCGCTTTGATCAGCACTGCTTTTGGACTGGACGCTGCATAGGTTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118927.8 ENSMUST00000125280.8 |
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| CDS CCA 72 bp | GTTTTCATGTACACAGATGCCGTGTCGCCCAAATCCTaGAACGTGGGAGCCATGGCTGTGATTCCTGCACTG | + |
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Preference number: 6 (lower is better) Translates to: VFMYTDAVSPKS*NVGAMAVIPAL Trigger: CAGTGCAGGAATCACAGCCATGGCTCCCACGTTCCAGGATTTGGGCGACACGGCATCTGTGTACATGAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS TCA 72 bp | CCCTTTGAGATGAGATACGCTATGATGGGCATGTGCTaGAACAGGACCGCCAGATGGATGCTGCTGAATCCC | + |
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Preference number: 6 (lower is better) Translates to: PFEMRYAMMGMC*NRTARWMLLNP Trigger: GGGATTCAGCAGCATCCATCTGGCGGTCCTGTTTCAGCACATGCCCATCATAGCGTATCTCATCTCAAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118927.8 ENSMUST00000125280.8 |
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| CDS TCA 72 bp | ATGATGCAGGGCTTCACTAAGCCAAAGCAGCCACACTaGAAGAAATCTGCCAGGTTCTGTGTGAATCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: MMQGFTKPKQPH*KKSARFCVNPR Trigger: CCTCGGATTCACACAGAACCTGGCAGATTTCTTTCAGTGTGGCTGCTTTGGCTTAGTGAAGCCCTGCATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS GCA 72 bp | ATAGAGAGTATCAGCAGCAGGAAGAGCTCGCATTTGTaGAGCCATCGCCAAAGCCGAAACTGTTTGTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: IESISSRKSSHL*SHRQSRNCLLA Trigger: AGCCAACAAACAGTTTCGGCTTTGGCGATGGCTGCACAAATGCGAGCTCTTCCTGCTGCTGATACTCTCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118927.8 ENSMUST00000125280.8 |
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| CDS GCA 72 bp | AAAAGCAGTGCTGATCAAAGCGAGCCACACAGGAGTTaGACACGTGGCAATGGAGTGATCTTAAAGGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: KSSADQSEPHRS*TRGNGVILKAS Trigger: GGAAGCCTTTAAGATCACTCCATTGCCACGTGTGCAACTCCTGTGTGGCTCGCTTTGATCAGCACTGCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118927.8 ENSMUST00000125280.8 |
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| CDS GCA 72 bp | AATCCCTCTCCATCAATCAGAGTGGGGTCTGCACCGTaGTGGAGCAATAATATGACCATAGGCAAATGCCCT | + |
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Preference number: 6 (lower is better) Translates to: NPSPSIRVGSAP*WSNNMTIGKCP Trigger: AGGGCATTTGCCTATGGTCATATTATTGCTCCAGCACGGTGCAGACCCCACTCTGATTGATGGAGAGGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS CAA 72 bp | TCGCATTTGTGCAGCCATCGCCAAAGCCGAAACTGTTaGTTGGCTCTCATCTTGGCCTCTGTTCTTAGCATG | + |
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Preference number: 6 (lower is better) Translates to: SHLCSHRQSRNC*LALILASVLSM Trigger: CATGCTAAGAACAGAGGCCAAGATGAGAGCCAACAAACAGTTTCGGCTTTGGCGATGGCTGCACAAATGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118927.8 ENSMUST00000125280.8 |
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| CDS CAA 72 bp | GCAAATGCCCTTGTCGGATGGCCCAGTGAAGAGGAGTaGAATTTAGGTCACCACCCAACTGATCTATCACAG | + |
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Preference number: 6 (lower is better) Translates to: ANALVGWPSEEE*NLGHHPTDLSQ Trigger: CTGTGATAGATCAGTTGGGTGGTGACCTAAATTCAACTCCTCTTCACTGGGCCATCCGACAAGGGCATTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS CCA 72 bp | ATTTGTGCAGCCATCGCCAAAGCCGAAACTGTTTGTTaGCTCTCATCTTGGCCTCTGTTCTTAGCATGTGAC | + |
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Preference number: 6 (lower is better) Translates to: ICAAIAKAETVC*LSSWPLFLACD Trigger: GTCACATGCTAAGAACAGAGGCCAAGATGAGAGCCAACAAACAGTTTCGGCTTTGGCGATGGCTGCACAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118927.8 ENSMUST00000125280.8 |
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| CDS CAA 72 bp | ATCATAGAGAGTATCAGCAGCAGGAAGAGCTCGCATTaGTGCAGCCATCGCCAAAGCCGAAACTGTTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: IIESISSRKSSH*CSHRQSRNCLL Trigger: CAACAAACAGTTTCGGCTTTGGCGATGGCTGCACAAATGCGAGCTCTTCCTGCTGCTGATACTCTCTATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118927.8 ENSMUST00000125280.8 |
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| CDS GCA 72 bp | TTCCTGAGGGACAATGTCTGTTTCATGTGCCTGCTTTaGTTTAAGAGGCTGATTCTCTCATGGGAGGTTAGG | + |
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Preference number: 6 (lower is better) Translates to: FLRDNVCFMCLL*FKRLILSWEVR Trigger: CCTAACCTCCCATGAGAGAATCAGCCTCTTAAAGCAAAGCAGGCACATGAAACAGACATTGTCCCTCAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118927.8 |
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| CDS TCA 72 bp | TTGTTGGCTCTCATCTTGGCCTCTGTTCTTAGCATGTaGCTAATGAGCTGGTTTTTACTTTGTAGAGCCATA | + |
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Preference number: 6 (lower is better) Translates to: LLALILASVLSM*LMSWFLLCRAI Trigger: TATGGCTCTACAAAGTAAAAACCAGCTCATTAGTCACATGCTAAGAACAGAGGCCAAGATGAGAGCCAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118927.8 ENSMUST00000125280.8 |
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| CDS TCA 72 bp | CACAATGATTTGACCAGTAGACGAAAGATCCATATATaGTCCAGTCACATACCATGGAAAGGGAAAGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: HNDLTSRRKIHI*SSHIPWKGKAR Trigger: TCTTGCTTTCCCTTTCCATGGTATGTGACTGGATCATATATGGATCTTTCGTCTACTGGTCAAATCATTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118927.8 ENSMUST00000125280.8 |
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