Pregenerated sensors for ZDHHC12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015335Ensembl transcript IDs: ENSMUST00000081838.7, ENSMUST00000102865.11
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTAGGAAGACGTAAAGGCCTTAGGCTGAGTGGGCTGATCCCTAGCTaGCACAGCCTCTGGCTTTTAGGCACAACAGCAGCCTTCTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: LGRRKGLRLSGLIPS*HSLWLLGTTAAFSP Trigger: TGGAGAGAAGGCTGCTGTTGTGCCTAAAAGCCAGAGGCTGTGCCAGCTAGGGATCAGCCCACTCAGCCTAAGGCCTTTACGTCTTCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| 3UTR-3UTR TCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGTGTCTACTTCTCTCCTaGGGGCTGGAAGCCCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: IKLIKLYTRGSQARGCVVCLLLS*GLEALG Trigger: TCCTAGGGCTTCCAGCCCTCAGGAGAGAAGTAGACA...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| 3UTR-3UTR CCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGGGGCTGATCCCTAGCTaGCACAGCCTCTGGCTTTTA | + |
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Preference number: 2 (lower is better) Translates to: IKLIKLYTRGSQARGCVVGLIPS*HSLWLL Trigger: TAAAAGCCAGAGGCTGTGCCAGCTAGGGATCAGCCC...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| 3UTR CCA 72 bp | AGGCTGAGTGGGCTGATCCCTAGCTGGCACAGCCTCTaGCTTTTAGGCACAACAGCAGCCTTCTCTCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: RLSGLIPSWHSL*LLGTTAAFSPA Trigger: TGCTGGAGAGAAGGCTGCTGTTGTGCCTAAAAGCCAGAGGCTGTGCCAGCTAGGGATCAGCCCACTCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| 3UTR CCA 72 bp | CGTAAAGGCCTTAGGCTGAGTGGGCTGATCCCTAGCTaGCACAGCCTCTGGCTTTTAGGCACAACAGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: RKGLRLSGLIPS*HSLWLLGTTAA Trigger: GGCTGCTGTTGTGCCTAAAAGCCAGAGGCTGTGCCAGCTAGGGATCAGCCCACTCAGCCTAAGGCCTTTACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS-3UTR GCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGCGGGCACGCAGGGGCTaGAGCACCAGACAGTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: IKLIKLYTRGSQARGCVVRARRG*STRQCL Trigger: CAGACACTGTCTGGTGCTGCAGCCCCTGCGTGCCCG...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS-3UTR TCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGGCAGCAGGAAGGTGGTaGACAGGAGCCCAGTGGACC | + |
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Preference number: 4 (lower is better) Translates to: IKLIKLYTRGSQARGCVVAAGRW*TGAQWT Trigger: GGTCCACTGGGCTCCTGTTCACCACCTTCCTGCTGC...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS-3UTR GCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGCAGGTCAGCACGGTGTaGCCAGTCCGCACCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: IKLIKLYTRGSQARGCVVQVSTV*PVRTSI Trigger: GATGCTGGTGCGGACTGGGCACACCGTGCTGACCTG...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS-3UTR GCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGCTGAAGGCCAGACCATaGCAGGCACAGGCCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: IKLIKLYTRGSQARGCVVLKARP*QAQAPQ Trigger: CTGTGGGGCCTGTGCCTGGCATGGTCTGGCCTTCAG...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS-3UTR GCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGCAAAGGGGTTGCTGGTaGGCTGGCGGAGGTAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: IKLIKLYTRGSQARGCVVQRGCW*AGGGRR Trigger: TCGCCTACCTCCGCCAGCGCACCAGCAACCCCTTTG...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS-3UTR GCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGCTCGGTCAAAGGGGTTaGTGGTGCGCTGGCGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: IKLIKLYTRGSQARGCVVLGQRG*WCAGGG Trigger: ACCTCCGCCAGCGCACCAGCAACCCCTTTGACCGAG...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS-3UTR CCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGTCTGCAGCGCCGGAGTaGGACGGCCTGAGGAACCAT | + |
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Preference number: 4 (lower is better) Translates to: IKLIKLYTRGSQARGCVVSAAPE*DGLRNH Trigger: ATGGTTCCTCAGGCCGTCCCACTCCGGCGCTGCAGA...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS-3UTR CCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGGGTCAAAGGGGTTGCTaGTGCGCTGGCGGAGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: IKLIKLYTRGSQARGCVVGQRGC*CAGGGR Trigger: CCTACCTCCGCCAGCGCACCAGCAACCCCTTTGACC...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS-3UTR TCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGGGAAGAGCACCAGAGTaGTTCCCCAGGTCAGCACGG | + |
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Preference number: 4 (lower is better) Translates to: IKLIKLYTRGSQARGCVVGRAPE*FPRSAR Trigger: CCGTGCTGACCTGGGGAATCACTCTGGTGCTCTTCC...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS-3UTR TCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGCAGGGCTGGAAGAACTaGAGGCCAGACCATGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: IKLIKLYTRGSQARGCVVQGWKN*RPDHAR Trigger: CCTGGCATGGTCTGGCCTTCAGTTCTTCCAGCCCTG...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS-3UTR GCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGGGCTCACCGGTGTCGTaGAGGAAGAGCACCAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: IKLIKLYTRGSQARGCVVGSPVS*RKSTRV Trigger: CACTCTGGTGCTCTTCCTGCACGACACCGGTGAGCC...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081838.7 |
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| CDS-3UTR CCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGCGGCCTGAGGAACCATaGCTGCCTGTTCCTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: IKLIKLYTRGSQARGCVVRPEEP*LPVPPW Trigger: CCAAGGAGGAACAGGCAGCCATGGTTCCTCAGGCCG...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS-3UTR TCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGGCCGGGGTCCATGAGTaGCACAGCCAGATAAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: IKLIKLYTRGSQARGCVVAGVHE*HSQIKQ Trigger: CTGCTTTATCTGGCTGTGTCACTCATGGACCCCGGC...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS-3UTR GCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGAGGAGCAGCTCCCCTTaGTCTTCCCATTGGCGTAGC | + |
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Preference number: 4 (lower is better) Translates to: IKLIKLYTRGSQARGCVVRSSSP*SSHWRS Trigger: GCTACGCCAATGGGAAGAGCAAGGGGAGCTGCTCCT...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS-3UTR GCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGCTGAGGAACCATGGCTaGCTGTTCCTCCTTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IKLIKLYTRGSQARGCVVLRNHG*LFLLGL Trigger: GAGCCCAAGGAGGAACAGGCAGCCATGGTTCCTCAG...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS-3UTR GCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGCGTAGCTCGGTGTCGTaGAGGAAGAGCACCAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: IKLIKLYTRGSQARGCVVRSSVS*RKSTRV Trigger: CACTCTGGTGCTCTTCCTGCACGACACCGAGCTACG...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102865.11 |
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| CDS-3UTR CCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGGCCACAAAGAGCGGGTaGTTGCGTTCACCCACACAG | + |
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Preference number: 4 (lower is better) Translates to: IKLIKLYTRGSQARGCVVATKSG*LRSPTQ Trigger: CTGTGTGGGTGAACGCAACCACCCGCTCTTTGTGGC...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS-3UTR TCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGCATAGCCGGGGTCCATaGGTGACACAGCCAGATAAA | + |
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Preference number: 4 (lower is better) Translates to: IKLIKLYTRGSQARGCVVHSRGP*VTQPDK Trigger: TTTATCTGGCTGTGTCACTCATGGACCCCGGCTATG...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS-3UTR GCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGCAAAGAGCGGGTGGTTaGGTTCACCCACACAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: IKLIKLYTRGSQARGCVVQRAGG*VHPHSS Trigger: AGAACTGTGTGGGTGAACGCAACCACCCGCTCTTTG...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS-3UTR GCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGAACTACCAGCTGCAGTaGCAGGTAGGCCACAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: IKLIKLYTRGSQARGCVVNYQLQ*QVGHKE Trigger: CTCTTTGTGGCCTACCTGGCACTGCAGCTGGTAGTT...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS-3UTR GCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGAGACAACCTGGCTGCTaGCTTCTTCCTCTTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: IKLIKLYTRGSQARGCVVRQPGC*LLPLPQ Trigger: CTGAGGAAGAGGAAGAAGGCAGCAGCCAGGTTGTCT...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS-3UTR CCA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGCAACCACAGAAAAAGTaGGCCAGGTTTCGAGTCGGC | + |
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Preference number: 4 (lower is better) Translates to: IKLIKLYTRGSQARGCVVQPQKK*ARFRVG Trigger: GCCGACTCGAAACCTGGCCCACTTTTTCTGTGGTTG...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS CCA 90 bp | AGCAGCTCCCCTTGCTCTTCCCATTGGCGTAGCTGCGTGATCGGGTaGGCTCGGGGTGGCGCGGTGTCCGGCTCACCGGTGTCGTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SSSPCSSHWRSCVIG*ARGGAVSGSPVSCR Trigger: CCTGCACGACACCGGTGAGCCGGACACCGCGCCACCCCGAGCCCACCCGATCACGCAGCTACGCCAATGGGAAGAGCAAGGGGAGCTGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081838.7 |
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| CDS GCA 90 bp | ATCGGGTGGGCTCGGGGTGGCGCGGTGTCCGGCTCACCGGTGTCGTaGAGGAAGAGCACCAGAGTGATTCCCCAGGTCAGCACGGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: IGWARGGAVSGSPVS*RKSTRVIPQVSTVC Trigger: GCACACCGTGCTGACCTGGGGAATCACTCTGGTGCTCTTCCTGCACGACACCGGTGAGCCGGACACCGCGCCACCCCGAGCCCACCCGAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081838.7 |
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| CDS TCA 90 bp | GCGCGGTGTCCGGCTCACCGGTGTCGTGCAGGAAGAGCACCAGAGTaGTTCCCCAGGTCAGCACGGTGTGCCCAGTCCGCACCAGCATCC | + |
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Preference number: 5 (lower is better) Translates to: ARCPAHRCRAGRAPE*FPRSARCAQSAPAS Trigger: GGATGCTGGTGCGGACTGGGCACACCGTGCTGACCTGGGGAATCACTCTGGTGCTCTTCCTGCACGACACCGGTGAGCCGGACACCGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081838.7 |
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| CDS CCA 90 bp | GCCGAGAGAGTCTCCCAGGGCCCAGAGGGCCAACCACAGAAAAAGTaGGCCAGGTTTCGAGTCGGCCCTCGGTCAAAGGGGTTGCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: AERVSQGPEGQPQKK*ARFRVGPRSKGLLV Trigger: CACCAGCAACCCCTTTGACCGAGGGCCGACTCGAAACCTGGCCCACTTTTTCTGTGGTTGGCCCTCTGGGCCCTGGGAGACTCTCTCGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS TCA 90 bp | CTTCCCATTGGCGTAGCTCGGTGTCGTGCAGGAAGAGCACCAGAGTaGTTCCCCAGGTCAGCACGGTGTGCCCAGTCCGCACCAGCATCC | + |
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Preference number: 5 (lower is better) Translates to: LPIGVARCRAGRAPE*FPRSARCAQSAPAS Trigger: GGATGCTGGTGCGGACTGGGCACACCGTGCTGACCTGGGGAATCACTCTGGTGCTCTTCCTGCACGACACCGAGCTACGCCAATGGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102865.11 |
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| CDS GCA 90 bp | AGGAGCAGCTCCCCTTGCTCTTCCCATTGGCGTAGCTCGGTGTCGTaGAGGAAGAGCACCAGAGTGATTCCCCAGGTCAGCACGGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: RSSSPCSSHWRSSVS*RKSTRVIPQVSTVC Trigger: GCACACCGTGCTGACCTGGGGAATCACTCTGGTGCTCTTCCTGCACGACACCGAGCTACGCCAATGGGAAGAGCAAGGGGAGCTGCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102865.11 |
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| CDS GCA 90 bp | CTTAGCACCAGGAGCAGGAATGTGAGGGGCAGGAGCAGCTCCCCTTaGTCTTCCCATTGGCGTAGCTCGGTGTCGTGCAGGAAGAGCACC | + |
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Preference number: 5 (lower is better) Translates to: LSTRSRNVRGRSSSP*SSHWRSSVSCRKST Trigger: GGTGCTCTTCCTGCACGACACCGAGCTACGCCAATGGGAAGAGCAAGGGGAGCTGCTCCTGCCCCTCACATTCCTGCTCCTGGTGCTAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102865.11 |
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| CDS CCA 90 bp | AGCAGGAATGTGAGGGGCAGGAGCAGCTCCCCTTGCTCTTCCCATTaGCGTAGCTCGGTGTCGTGCAGGAAGAGCACCAGAGTGATTCCC | + |
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Preference number: 5 (lower is better) Translates to: SRNVRGRSSSPCSSH*RSSVSCRKSTRVIP Trigger: GGGAATCACTCTGGTGCTCTTCCTGCACGACACCGAGCTACGCCAATGGGAAGAGCAAGGGGAGCTGCTCCTGCCCCTCACATTCCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102865.11 |
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| CDS TCA 90 bp | GTCAAAGGGGTTGCTGGTGCGCTGGCGGAGGTAGGCGATTCGGTGTaGAGATATGAACTCCCAGGTAGTCGTGTTCCTGGCTACCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: VKGVAGALAEVGDSV*RYELPGSRVPGYQV Trigger: TACCTGGTAGCCAGGAACACGACTACCTGGGAGTTCATATCTTCACACCGAATCGCCTACCTCCGCCAGCGCACCAGCAACCCCTTTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS-3UTR CAA 90 bp | ATTAAATTAATAAAACTGTACACTCGAGGTAGCCAGGCCAGGGGTTGTGTAGTGACAAAGAGCGGGTGGTaGCGTTCACCCACACAGTTC | + |
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Preference number: 5 (lower is better) Translates to: IKLIKLYTRGSQARGCVVTKSGW*RSPTQF Trigger: GAACTGTGTGGGTGAACGCAACCACCCGCTCTTTGT...CACTACACAACCCCTGGCCTGGCTACCTCGAGTGTACAGTTTTATTAATTTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS GCA 72 bp | GCAGCGCCGGAGTGGGACGGCCTGAGGAACCATGGCTaGCTGTTCCTCCTTGGGCTCGCCCTGAGGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: AAPEWDGLRNHG*LFLLGLALRLG Trigger: CCCCAGCCTCAGGGCGAGCCCAAGGAGGAACAGGCAGCCATGGTTCCTCAGGCCGTCCCACTCCGGCGCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS TCA 72 bp | GCAGCTCCCCTTGCTCTTCCCATTGGCGTAGCTGCGTaGTCGGGTGGGCTCGGGGTGGCGCGGTGTCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: AAPLALPIGVAA*SGGLGVARCPA Trigger: AGCCGGACACCGCGCCACCCCGAGCCCACCCGATCACGCAGCTACGCCAATGGGAAGAGCAAGGGGAGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081838.7 |
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| CDS CCA 72 bp | CCTTGCTCTTCCCATTGGCGTAGCTGCGTGATCGGGTaGGCTCGGGGTGGCGCGGTGTCCGGCTCACCGGTG | + |
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Preference number: 6 (lower is better) Translates to: PCSSHWRSCVIG*ARGGAVSGSPV Trigger: CACCGGTGAGCCGGACACCGCGCCACCCCGAGCCCACCCGATCACGCAGCTACGCCAATGGGAAGAGCAAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081838.7 |
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| CDS GCA 72 bp | GCTCGGGGTGGCGCGGTGTCCGGCTCACCGGTGTCGTaGAGGAAGAGCACCAGAGTGATTCCCCAGGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: ARGGAVSGSPVS*RKSTRVIPQVS Trigger: GCTGACCTGGGGAATCACTCTGGTGCTCTTCCTGCACGACACCGGTGAGCCGGACACCGCGCCACCCCGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081838.7 |
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| CDS GCA 72 bp | AGGAGCAGCTCCCCTTGCTCTTCCCATTGGCGTAGCTaGGTGATCGGGTGGGCTCGGGGTGGCGCGGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: RSSSPCSSHWRS*VIGWARGGAVS Trigger: GGACACCGCGCCACCCCGAGCCCACCCGATCACGCAGCTACGCCAATGGGAAGAGCAAGGGGAGCTGCTCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081838.7 |
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| CDS GCA 72 bp | GGGCCAGGTTTCGAGTCGGCCCTCGGTCAAAGGGGTTaGTGGTGCGCTGGCGGAGGTAGGCGATTCGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: GPGFESALGQRG*WCAGGGRRFGV Trigger: CACACCGAATCGCCTACCTCCGCCAGCGCACCAGCAACCCCTTTGACCGAGGGCCGACTCGAAACCTGGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS CCA 72 bp | GGGCTGCAGCACCAGACAGTGTCTGCAGCGCCGGAGTaGGACGGCCTGAGGAACCATGGCTGCCTGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GLQHQTVSAAPE*DGLRNHGCLFL Trigger: GAGGAACAGGCAGCCATGGTTCCTCAGGCCGTCCCACTCCGGCGCTGCAGACACTGTCTGGTGCTGCAGCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS TCA 72 bp | CCGGCTCACCGGTGTCGTGCAGGAAGAGCACCAGAGTaGTTCCCCAGGTCAGCACGGTGTGCCCAGTCCGCA | + |
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Preference number: 6 (lower is better) Translates to: PAHRCRAGRAPE*FPRSARCAQSA Trigger: TGCGGACTGGGCACACCGTGCTGACCTGGGGAATCACTCTGGTGCTCTTCCTGCACGACACCGGTGAGCCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081838.7 |
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| CDS TCA 72 bp | ACCAGACAGTGTCTGCAGCGCCGGAGTGGGACGGCCTaGGGAACCATGGCTGCCTGTTCCTCCTTGGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: TRQCLQRRSGTA*GTMAACSSLGS Trigger: CGAGCCCAAGGAGGAACAGGCAGCCATGGTTCCTCAGGCCGTCCCACTCCGGCGCTGCAGACACTGTCTGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS CCA 72 bp | GTCTCCCAGGGCCCAGAGGGCCAACCACAGAAAAAGTaGGCCAGGTTTCGAGTCGGCCCTCGGTCAAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: VSQGPEGQPQKK*ARFRVGPRSKG Trigger: CCCCTTTGACCGAGGGCCGACTCGAAACCTGGCCCACTTTTTCTGTGGTTGGCCCTCTGGGCCCTGGGAGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS GCA 72 bp | AGGAGCAGGAATGTGAGGGGCAGGAGCAGCTCCCCTTaGTCTTCCCATTGGCGTAGCTGCGTGATCGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: RSRNVRGRSSSP*SSHWRSCVIGW Trigger: CCACCCGATCACGCAGCTACGCCAATGGGAAGAGCAAGGGGAGCTGCTCCTGCCCCTCACATTCCTGCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081838.7 |
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| CDS GCA 72 bp | AGGAGCAGGAATGTGAGGGGCAGGAGCAGCTCCCCTTaGTCTTCCCATTGGCGTAGCTCGGTGTCGTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RSRNVRGRSSSP*SSHWRSSVSCR Trigger: CCTGCACGACACCGAGCTACGCCAATGGGAAGAGCAAGGGGAGCTGCTCCTGCCCCTCACATTCCTGCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102865.11 |
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| CDS CCA 72 bp | GTGAGGGGCAGGAGCAGCTCCCCTTGCTCTTCCCATTaGCGTAGCTCGGTGTCGTGCAGGAAGAGCACCAGA | + |
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Preference number: 6 (lower is better) Translates to: VRGRSSSPCSSH*RSSVSCRKSTR Trigger: TCTGGTGCTCTTCCTGCACGACACCGAGCTACGCCAATGGGAAGAGCAAGGGGAGCTGCTCCTGCCCCTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102865.11 |
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| CDS GCA 72 bp | GGTTTCGAGTCGGCCCTCGGTCAAAGGGGTTGCTGGTaGGCTGGCGGAGGTAGGCGATTCGGTGTGAAGATA | + |
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Preference number: 6 (lower is better) Translates to: GFESALGQRGCW*AGGGRRFGVKI Trigger: TATCTTCACACCGAATCGCCTACCTCCGCCAGCGCACCAGCAACCCCTTTGACCGAGGGCCGACTCGAAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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| CDS GCA 72 bp | TCCCCTTGCTCTTCCCATTGGCGTAGCTCGGTGTCGTaGAGGAAGAGCACCAGAGTGATTCCCCAGGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: SPCSSHWRSSVS*RKSTRVIPQVS Trigger: GCTGACCTGGGGAATCACTCTGGTGCTCTTCCTGCACGACACCGAGCTACGCCAATGGGAAGAGCAAGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102865.11 |
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| CDS TCA 72 bp | GTTGCTGGTGCGCTGGCGGAGGTAGGCGATTCGGTGTaGAGATATGAACTCCCAGGTAGTCGTGTTCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: VAGALAEVGDSV*RYELPGSRVPG Trigger: GCCAGGAACACGACTACCTGGGAGTTCATATCTTCACACCGAATCGCCTACCTCCGCCAGCGCACCAGCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081838.7 ENSMUST00000102865.11 |
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