Pregenerated sensors for ZCWPW2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032443Ensembl transcript IDs: ENSMUST00000111769.11, ENSMUST00000187803.3, ENSMUST00000191100.2, ENSMUST00000238919.2
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTGTAACGTGCTTAGACAATCACACAGCACTCGGCCCTGTCTGTTaGGGCAGGAGCAGGGAGAGGACGGAGTGTCTCCCTGAATGCAGA | + |
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Preference number: 1 (lower is better) Translates to: CVTCLDNHTALGPVC*GRSRERTECLPECR Trigger: TCTGCATTCAGGGAGACACTCCGTCCTCTCCCTGCTCCTGCCTCAACAGACAGGGCCGAGTGCTGTGTGATTGTCTAAGCACGTTACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR CCA 90 bp | GGACGATGCTCCCAGCTCTGTGCATCCCCAGCTAAGATTTGCTGTTaGGAGATTCATGGTGATTCCTCCAGAGGATTGGGTAGAGCTAAG | + |
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Preference number: 1 (lower is better) Translates to: GRCSQLCASPAKICC*EIHGDSSRGLGRAK Trigger: CTTAGCTCTACCCAATCCTCTGGAGGAATCACCATGAATCTCCCAACAGCAAATCTTAGCTGGGGATGCACAGAGCTGGGAGCATCGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR GCA 90 bp | TCCAGGGAGCATGAAGTCATCAGTGTAATGAATCCATGTGACATCTaGTCTCCCTGTGACTCATCCTCTCTTGCTGTGGGTTCTTGGATT | + |
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Preference number: 1 (lower is better) Translates to: SREHEVISVMNPCDI*SPCDSSSLAVGSWI Trigger: AATCCAAGAACCCACAGCAAGAGAGGATGAGTCACAGGGAGAGCAGATGTCACATGGATTCATTACACTGATGACTTCATGCTCCCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR CCA 90 bp | GACATCTGCTCTCCCTGTGACTCATCCTCTCTTGCTGTGGGTTCTTaGATTTGTTGCAGCATTTTCTCCAGTTCTTTCAGCAAACCTTCA | + |
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Preference number: 1 (lower is better) Translates to: DICSPCDSSSLAVGS*ICCSIFSSSFSKPS Trigger: TGAAGGTTTGCTGAAAGAACTGGAGAAAATGCTGCAACAAATCCAAGAACCCACAGCAAGAGAGGATGAGTCACAGGGAGAGCAGATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR CCA 90 bp | ATCCATGTGACATCTGCTCTCCCTGTGACTCATCCTCTCTTGCTGTaGGTTCTTGGATTTGTTGCAGCATTTTCTCCAGTTCTTTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: IHVTSALPVTHPLLL*VLGFVAAFSPVLSA Trigger: TGCTGAAAGAACTGGAGAAAATGCTGCAACAAATCCAAGAACCCACAGCAAGAGAGGATGAGTCACAGGGAGAGCAGATGTCACATGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR TCA 90 bp | GAGGAACTTTTGAATTTGACAGATTTTTCCTTCTGTAGTATTCGGTaGTGCTGGGCACTAAGTTGGTTCCACCTTAGCTACAGGGACAAG | + |
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Preference number: 1 (lower is better) Translates to: EELLNLTDFSFCSIR*CWALSWFHLSYRDK Trigger: CTTGTCCCTGTAGCTAAGGTGGAACCAACTTAGTGCCCAGCATCACCGAATACTACAGAAGGAAAAATCTGTCAAATTCAAAAGTTCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR-3UTR CCA 90 bp | GCCACGGTTGTTGTCCTCAGGAAAGAAAATTCCGGGGATTCCGTGTCCTCAGCTGTCCTCAGCTTGACCTaGGGACATGCTGGGAGCTCG | + |
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Preference number: 2 (lower is better) Translates to: ATVVVLRKENSGDSVSSAVLSLT*GHAGSS Trigger: CGAGCTCCCAGCATGTCCCCAGGTCAAGCTGAGGAC...AGCTGAGGACACGGAATCCCCGGAATTTTCTTTCCTGAGGACAACAACCGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCACTCGGCCCTGTCTGTTGAGGCAGGAGCAGGGAGAGGACGGAGTGTCTCCTCACCACAGCAGCTTTaGTATCTGTTTTGGCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: QHSALSVEAGAGRGRSVSSPQQL*YLFWLC Trigger: ACAGAGCCAAAACAGATACCAAAGCTGCTGTGGTGA...GGAGACACTCCGTCCTCTCCCTGCTCCTGCCTCAACAGACAGGGCCGAGTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187803.3 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCAAGGCGCTTGGTGTCATTAGAGAACAGGGTGGGATTCAACCGTGGTGTCTTGCATCCCTTTCTTaGTCACCACAGCAGCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: LCKALGVIREQGGIQPWCLASLS*SPQQLW Trigger: CCAAAGCTGCTGTGGTGACCAAGAAAGGGATGCAAG...ACACCACGGTTGAATCCCACCCTGTTCTCTAATGACACCAAGCGCCTTGCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187803.3 |
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| 3UTR CAA 90 bp | GGAAGTAAACACAAGTTGTCGCCACTTGATTTCTCTGCAAGGCGCTaGGTGTCATTAGAGAACAGGGTGGGATTCAACCGTGGTGTGCGA | + |
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Preference number: 2 (lower is better) Translates to: GSKHKLSPLDFSARR*VSLENRVGFNRGVR Trigger: TCGCACACCACGGTTGAATCCCACCCTGTTCTCTAATGACACCAAGCGCCTTGCAGAGAAATCAAGTGGCGACAACTTGTGTTTACTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR-3UTR GCA 90 bp | ACTCGGGTGTGCAGGTGTCTCTGTAGTCTGATGATATGGAGTTCTTCAGGACCCACAGATGCTAACAGTTaGTGCTTTTGGCTCACAAGG | + |
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Preference number: 2 (lower is better) Translates to: TRVCRCLCSLMIWSSSGPTDANS*CFWLTR Trigger: CCTTGTGAGCCAAAAGCAGCAACTGTTAGCATCTGT...GGGTCCTGAAGAACTCCATATCATCAGACTACAGAGACACCTGCACACCCGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR-3UTR GCA 90 bp | TATGGAGTTCTTCAGGACCCTCTAGAACTCACTCCTGTGGACGATGCTCCCAGCGGTTCTTGGATTTGTTaGAGCATTTTCTCCAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: YGVLQDPLELTPVDDAPSGSWIC*SIFSSS Trigger: AGAACTGGAGAAAATGCTGCAACAAATCCAAGAACC...GCTGGGAGCATCGTCCACAGGAGTGAGTTCTAGAGGGTCCTGAAGAACTCCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR CAA 90 bp | GAGCATGAAGTCATCAGTGTAATGAATCCATGTGACATCCCTTTCTaGGTCACCACAGCAGCTTTGGTATCTGTTTTGGCTCTGTTCGGC | + |
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Preference number: 2 (lower is better) Translates to: EHEVISVMNPCDIPF*VTTAALVSVLALFG Trigger: GCCGAACAGAGCCAAAACAGATACCAAAGCTGCTGTGGTGACCAAGAAAGGGATGTCACATGGATTCATTACACTGATGACTTCATGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191100.2 |
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| 3UTR-3UTR GCA 90 bp | TTCATGGTGATTCCTCCAGAGGATTGGGTAGAGCTAAGGGCACCAGCTTCCCTTTTAATTTTGGAAACTTaGATCCCTTTCTTGGTCACC | + |
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Preference number: 2 (lower is better) Translates to: FMVIPPEDWVELRAPASLLILET*IPFLVT Trigger: GGTGACCAAGAAAGGGATGCAAGTTTCCAAAATTAA...AAGGGAAGCTGGTGCCCTTAGCTCTACCCAATCCTCTGGAGGAATCACCATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187803.3 |
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| 3UTR-3UTR CCA 90 bp | TCATTAGAGAACAGGGTGGGATTCAACCGTGGTGTGCGAGGAACTTTTGAATTTCATCCTCTCTTGCTGTaGGTTCTTGGATTTGTTGCA | + |
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Preference number: 2 (lower is better) Translates to: SLENRVGFNRGVRGTFEFHPLLL*VLGFVA Trigger: TGCAACAAATCCAAGAACCCACAGCAAGAGAGGATG...AAATTCAAAAGTTCCTCGCACACCACGGTTGAATCCCACCCTGTTCTCTAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR-3UTR GCA 90 bp | GAAAGCTCTGAAATCCCTGAGGAGTTTTTGTCTCACCCTCTGAAACACAGATGCGGTTCTTGGATTTGTTaGAGCATTTTCTCCAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: ESSEIPEEFLSHPLKHRCGSWIC*SIFSSS Trigger: AGAACTGGAGAAAATGCTGCAACAAATCCAAGAACC...GCATCTGTGTTTCAGAGGGTGAGACAAAAACTCCTCAGGGATTTCAGAGCTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR-3UTR TCA 90 bp | TTTGAGTTCTCACTGAGACTTGTTAACAGAACAGGTAGCCATTTTAATAGTTCTGGGCCTAAATACTCATaGACAGCACCTGTTTATGAT | + |
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Preference number: 2 (lower is better) Translates to: FEFSLRLVNRTGSHFNSSGPKYS*TAPVYD Trigger: ATCATAAACAGGTGCTGTTCATGAGTATTTAGGCCC...AGAACTATTAAAATGGCTACCTGTTCTGTTAACAAGTCTCAGTGAGAACTCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
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| 3UTR-3UTR CAA 90 bp | CAGCACTCGGCCCTGTCTGTTGAGGCAGGAGCAGGGAGAGGACGGAGTGTCTCCTTCCGTGTCCTCAGCTaGACCTGGGGACATGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: QHSALSVEAGAGRGRSVSFRVLS*TWGHAG Trigger: CCCAGCATGTCCCCAGGTCAAGCTGAGGACACGGAA...GGAGACACTCCGTCCTCTCCCTGCTCCTGCCTCAACAGACAGGGCCGAGTGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR TCA 72 bp | TGCTTAGACAATCACACAGCACTCGGCCCTGTCTGTTaGGGCAGGAGCAGGGAGAGGACGGAGTGTCTCCCT | + |
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Preference number: 3 (lower is better) Translates to: CLDNHTALGPVC*GRSRERTECLP Trigger: AGGGAGACACTCCGTCCTCTCCCTGCTCCTGCCTCAACAGACAGGGCCGAGTGCTGTGTGATTGTCTAAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR CCA 72 bp | GCTGTTGGGAGATTCATGGTGATTCCTCCAGAGGATTaGGTAGAGCTAAGGGCACCAGCTTCCCTTCGGTGG | + |
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Preference number: 3 (lower is better) Translates to: AVGRFMVIPPED*VELRAPASLRW Trigger: CCACCGAAGGGAAGCTGGTGCCCTTAGCTCTACCCAATCCTCTGGAGGAATCACCATGAATCTCCCAACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR GCA 72 bp | TCTTCAGGACCCTCTAGAACTCACTCCTGTGGACGATaGTCCCAGCTCTGTGCATCCCCAGCTAAGATTTGC | + |
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Preference number: 3 (lower is better) Translates to: SSGPSRTHSCGR*SQLCASPAKIC Trigger: GCAAATCTTAGCTGGGGATGCACAGAGCTGGGAGCATCGTCCACAGGAGTGAGTTCTAGAGGGTCCTGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR-3UTR CAA 90 bp | CAGCACTCGGCCCTGTCTGTTGAGGCAGGAGCAGGGAGAGGACGGAGTGTCTCCATTAATTTTGGAAACTaGCATCCCTTTCTTGGTCAC | + |
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Preference number: 3 (lower is better) Translates to: QHSALSVEAGAGRGRSVSINFGN*HPFLGH Trigger: GTGACCAAGAAAGGGATGCAAGTTTCCAAAATTAAT...GGAGACACTCCGTCCTCTCCCTGCTCCTGCCTCAACAGACAGGGCCGAGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187803.3 |
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| 3UTR GCA 72 bp | CGATGCTCCCAGCTCTGTGCATCCCCAGCTAAGATTTaGTGTTGGGAGATTCATGGTGATTCCTCCAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: RCSQLCASPAKI*CWEIHGDSSRG Trigger: TCCTCTGGAGGAATCACCATGAATCTCCCAACAGCAAATCTTAGCTGGGGATGCACAGAGCTGGGAGCATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR CCA 72 bp | GATTGGGTAGAGCTAAGGGCACCAGCTTCCCTTCGGTaGCGCGGTCACTTCATAGCAACTGAAGCCAATAAA | + |
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Preference number: 3 (lower is better) Translates to: DWVELRAPASLR*RGHFIATEANK Trigger: TTTATTGGCTTCAGTTGCTATGAAGTGACCGCGCCACCGAAGGGAAGCTGGTGCCCTTAGCTCTACCCAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR CCA 72 bp | TCCCAGCTCTGTGCATCCCCAGCTAAGATTTGCTGTTaGGAGATTCATGGTGATTCCTCCAGAGGATTGGGT | + |
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Preference number: 3 (lower is better) Translates to: SQLCASPAKICC*EIHGDSSRGLG Trigger: ACCCAATCCTCTGGAGGAATCACCATGAATCTCCCAACAGCAAATCTTAGCTGGGGATGCACAGAGCTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR-3UTR CAA 90 bp | TCGCCACTTGATTTCTCTGCAAGGCGCTTGGTGTCATTAGAGAACAGGGTGGGAGTGACTCATCCTCTCTaGCTGTGGGTTCTTGGATTT | + |
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Preference number: 3 (lower is better) Translates to: SPLDFSARRLVSLENRVGVTHPL*LWVLGF Trigger: AAATCCAAGAACCCACAGCAAGAGAGGATGAGTCAC...TCCCACCCTGTTCTCTAATGACACCAAGCGCCTTGCAGAGAAATCAAGTGGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR CCA 72 bp | ACTCGGGTGTGCAGGTGTCTCTGTAGTCTGATGATATaGAGTTCTTCAGGACCCTCTAGAACTCACTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: TRVCRCLCSLMI*SSSGPSRTHSC Trigger: ACAGGAGTGAGTTCTAGAGGGTCCTGAAGAACTCCATATCATCAGACTACAGAGACACCTGCACACCCGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR CCA 72 bp | CATGTGACATCCCTTTCTTGGTCACCACAGCAGCTTTaGTATCTGTTTTGGCTCTGTTCGGCTTTGACAGGC | + |
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Preference number: 3 (lower is better) Translates to: HVTSLSWSPQQL*YLFWLCSALTG Trigger: GCCTGTCAAAGCCGAACAGAGCCAAAACAGATACCAAAGCTGCTGTGGTGACCAAGAAAGGGATGTCACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191100.2 |
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| 3UTR-3UTR CAA 90 bp | TGTTGTCCTCAGGAAAGAAAATTCCGGGGATTCCGTGTCCTCAGCTTGACCTGGGGGTTCTTGGATTTGTaGCAGCATTTTCTCCAGTTC | + |
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Preference number: 3 (lower is better) Translates to: CCPQERKFRGFRVLSLTWGFLDL*QHFLQF Trigger: GAACTGGAGAAAATGCTGCAACAAATCCAAGAACCC...CCAGGTCAAGCTGAGGACACGGAATCCCCGGAATTTTCTTTCCTGAGGACAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR CCA 72 bp | AAACTTGCATCCCTTTCTTGGTCACCACAGCAGCTTTaGTATCTGTTTTGGCTCTGTTCGGCTTTGACAGGC | + |
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Preference number: 3 (lower is better) Translates to: KLASLSWSPQQL*YLFWLCSALTG Trigger: GCCTGTCAAAGCCGAACAGAGCCAAAACAGATACCAAAGCTGCTGTGGTGACCAAGAAAGGGATGCAAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187803.3 |
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| 3UTR-3UTR CAA 90 bp | TCGCCACTTGATTTCTCTGCAAGGCGCTTGGTGTCATTAGAGAACAGGGTGGGAAATAGGCCACGGTTGTaGTCCTCAGGAAAGAAAATT | + |
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Preference number: 3 (lower is better) Translates to: SPLDFSARRLVSLENRVGNRPRL*SSGKKI Trigger: AATTTTCTTTCCTGAGGACAACAACCGTGGCCTATT...TCCCACCCTGTTCTCTAATGACACCAAGCGCCTTGCAGAGAAATCAAGTGGCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR-3UTR CAA 90 bp | TCATTAGAGAACAGGGTGGGATTCAACCGTGGTGTGCGAGGAACTTTTGAATTTGCAGATCTGAGGACCTaGGTTCCCGAGGAAGTAAAC | + |
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Preference number: 3 (lower is better) Translates to: SLENRVGFNRGVRGTFEFADLRT*VPEEVN Trigger: GTTTACTTCCTCGGGAACCAAGGTCCTCAGATCTGC...AAATTCAAAAGTTCCTCGCACACCACGGTTGAATCCCACCCTGTTCTCTAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR-3UTR CAA 90 bp | TGTGCATCCCCAGCTAAGATTTGCTGTTGGGAGATTCATGGTGATTCCTCCAGAGGGTTCTTGGATTTGTaGCAGCATTTTCTCCAGTTC | + |
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Preference number: 3 (lower is better) Translates to: CASPAKICCWEIHGDSSRGFLDL*QHFLQF Trigger: GAACTGGAGAAAATGCTGCAACAAATCCAAGAACCC...TCTGGAGGAATCACCATGAATCTCCCAACAGCAAATCTTAGCTGGGGATGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR-3UTR CAA 90 bp | TGTAGTCTGATGATATGGAGTTCTTCAGGACCCTCTAGAACTCACTCCTGTGGAGTGACTCATCCTCTCTaGCTGTGGGTTCTTGGATTT | + |
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Preference number: 3 (lower is better) Translates to: CSLMIWSSSGPSRTHSCGVTHPL*LWVLGF Trigger: AAATCCAAGAACCCACAGCAAGAGAGGATGAGTCAC...TCCACAGGAGTGAGTTCTAGAGGGTCCTGAAGAACTCCATATCATCAGACTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR TCA 72 bp | GCTCTGAAATCCCTGAGGAGTTTTTGTCTCACCCTCTaGAACACAGATGCTAACAGTTGCTGCTTTTGGCTC | + |
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Preference number: 3 (lower is better) Translates to: ALKSLRSFCLTL*NTDANSCCFWL Trigger: GAGCCAAAAGCAGCAACTGTTAGCATCTGTGTTTCAGAGGGTGAGACAAAAACTCCTCAGGGATTTCAGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR CCA 72 bp | ACATCTGCTCTCCCTGTGACTCATCCTCTCTTGCTGTaGGTTCTTGGATTTGTTGCAGCATTTTCTCCAGTT | + |
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Preference number: 3 (lower is better) Translates to: TSALPVTHPLLL*VLGFVAAFSPV Trigger: AACTGGAGAAAATGCTGCAACAAATCCAAGAACCCACAGCAAGAGAGGATGAGTCACAGGGAGAGCAGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR TCA 72 bp | TTGAATTTGACAGATTTTTCCTTCTGTAGTATTCGGTaGTGCTGGGCACTAAGTTGGTTCCACCTTAGCTAC | + |
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Preference number: 3 (lower is better) Translates to: LNLTDFSFCSIR*CWALSWFHLSY Trigger: GTAGCTAAGGTGGAACCAACTTAGTGCCCAGCATCACCGAATACTACAGAAGGAAAAATCTGTCAAATTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| 3UTR TCA 72 bp | AAACACTTTCTGCATGTGTTACATTTGAGTTCTCACTaGGACTTGTTAACAGAACAGGTAGCCATTTTAATA | + |
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Preference number: 3 (lower is better) Translates to: KHFLHVLHLSSH*DLLTEQVAILI Trigger: TATTAAAATGGCTACCTGTTCTGTTAACAAGTCTCAGTGAGAACTCAAATGTAACACATGCAGAAAGTGTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
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| CDS-3UTR GCA 90 bp | CACAGCACTCGGCCCTGTCTGTTGAGGCAGGAGCAGGGAGAGGACGGAGTGTCTTGTGCACGAACTCGCTaGTCTCCGGGGCCGGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: HSTRPCLLRQEQGEDGVSCARTR*SPGPGP Trigger: TGGGCCCGGCCCCGGAGAGCAGCGAGTTCGTGCACA...AGACACTCCGTCCTCTCCCTGCTCCTGCCTCAACAGACAGGGCCGAGTGCTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187803.3 |
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| CDS-3UTR GCA 90 bp | GCCACGGTTGTTGTCCTCAGGAAAGAAAATTCCGGGGATTCCGTGTCCTCAGCTGGGGTTCACTGCGGCTaGAGCTGCAGGGGACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: ATVVVLRKENSGDSVSSAGVHCG*SCRGQQ Trigger: CTGCTGTCCCCTGCAGCTGCAGCCGCAGTGAACCCC...AGCTGAGGACACGGAATCCCCGGAATTTTCTTTCCTGAGGACAACAACCGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| CDS-3UTR GCA 90 bp | GTCACCACAGCAGCTTTGGTATCTGTTTTGGCTCTGTTCGGCTTTGACAGGCAGTGTGCACGAACTCGCTaGTCTCCGGGGCCGGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: VTTAALVSVLALFGFDRQCARTR*SPGPGP Trigger: TGGGCCCGGCCCCGGAGAGCAGCGAGTTCGTGCACA...CTGCCTGTCAAAGCCGAACAGAGCCAAAACAGATACCAAAGCTGCTGTGGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187803.3 ENSMUST00000191100.2 |
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| CDS-3UTR CCA 90 bp | CAGCACTCGGCCCTGTCTGTTGAGGCAGGAGCAGGGAGAGGACGGAGTGTCTCCCTTGCATCCCTTTCTTaGTCACCACAGCAGCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: QHSALSVEAGAGRGRSVSLASLS*SPQQLW Trigger: CCAAAGCTGCTGTGGTGACCAAGAAAGGGATGCAAG...GGAGACACTCCGTCCTCTCCCTGCTCCTGCCTCAACAGACAGGGCCGAGTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111769.11 |
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| CDS-3UTR GCA 90 bp | CCACAGCAGCTTTGGTATCTGTTTTGGCTCTGTTCGGCTTTGACAGGCAGCACACACTGCGGCTGCAGCTaGAGGGGACAGCAGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: PQQLWYLFWLCSALTGSTHCGCS*RGQQPP Trigger: TGGAGGCTGCTGTCCCCTGCAGCTGCAGCCGCAGTG...TGTGCTGCCTGTCAAAGCCGAACAGAGCCAAAACAGATACCAAAGCTGCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187803.3 ENSMUST00000191100.2 |
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| CDS-3UTR GCA 90 bp | CCCTTTCTTGGTCACCACAGCAGCTTTGGTATCTGTTTTGGCTCTGTTCGGCTTCACTGCGGCTGCAGCTaGAGGGGACAGCAGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: PFLGHHSSFGICFGSVRLHCGCS*RGQQPP Trigger: TGGAGGCTGCTGTCCCCTGCAGCTGCAGCCGCAGTG...AAGCCGAACAGAGCCAAAACAGATACCAAAGCTGCTGTGGTGACCAAGAAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187803.3 ENSMUST00000191100.2 |
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| CDS-3UTR GCA 90 bp | TCCCCAGCTAAGATTTGCTGTTGGGAGATTCATGGTGATTCCTCCAGAGGATTGCACTGCGGCTGCAGCTaGAGGGGACAGCAGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SPAKICCWEIHGDSSRGLHCGCS*RGQQPP Trigger: TGGAGGCTGCTGTCCCCTGCAGCTGCAGCCGCAGTG...CAATCCTCTGGAGGAATCACCATGAATCTCCCAACAGCAAATCTTAGCTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
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| CDS-3UTR TCA 90 bp | GTTCTTCAGGACCCTCTAGAACTCACTCCTGTGGACGATGCTCCCAGCTCTGTGCCGTTTTCAAGGAACTaGGATTCTTCAGGGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: VLQDPLELTPVDDAPSSVPFSRN*DSSGKS Trigger: GGATTTCCCTGAAGAATCTCAGTTCCTTGAAAACGG...CACAGAGCTGGGAGCATCGTCCACAGGAGTGAGTTCTAGAGGGTCCTGAAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
||
| 3UTR CAA 72 bp | TCTGAGGACCTTGGTTCCCGAGGAAGTAAACACAAGTaGTCGCCACTTGATTTCTCTGCAAGGCGCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SEDLGSRGSKHK*SPLDFSARRLV Trigger: CACCAAGCGCCTTGCAGAGAAATCAAGTGGCGACAACTTGTGTTTACTTCCTCGGGAACCAAGGTCCTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
||
| 3UTR CAA 72 bp | CACAAGTTGTCGCCACTTGATTTCTCTGCAAGGCGCTaGGTGTCATTAGAGAACAGGGTGGGATTCAACCGT | + |
|
Preference number: 4 (lower is better) Translates to: HKLSPLDFSARR*VSLENRVGFNR Trigger: ACGGTTGAATCCCACCCTGTTCTCTAATGACACCAAGCGCCTTGCAGAGAAATCAAGTGGCGACAACTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
||
| 3UTR CAA 72 bp | CCATGTGACATCCCTTTCTTGGTCACCACAGCAGCTTaGGTATCTGTTTTGGCTCTGTTCGGCTTTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PCDIPFLVTTAA*VSVLALFGFDR Trigger: CCTGTCAAAGCCGAACAGAGCCAAAACAGATACCAAAGCTGCTGTGGTGACCAAGAAAGGGATGTCACATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191100.2 |
||
| CDS-3UTR GCA 90 bp | TTTGAGTTCTCACTGAGACTTGTTAACAGAACAGGTAGCCATTTTAATAGTTCTTGTGCACGAACTCGCTaGTCTCCGGGGCCGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FEFSLRLVNRTGSHFNSSCARTR*SPGPGP Trigger: TGGGCCCGGCCCCGGAGAGCAGCGAGTTCGTGCACA...AGAACTATTAAAATGGCTACCTGTTCTGTTAACAAGTCTCAGTGAGAACTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
||
| CDS-3UTR TCA 90 bp | CATCCCTTTCTTGGTCACCACAGCAGCTTTGGTATCTGTTTTGGCTCTGTTCGGCCGTTTTCAAGGAACTaGGATTCTTCAGGGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: HPFLGHHSSFGICFGSVRPFSRN*DSSGKS Trigger: GGATTTCCCTGAAGAATCTCAGTTCCTTGAAAACGG...CCGAACAGAGCCAAAACAGATACCAAAGCTGCTGTGGTGACCAAGAAAGGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187803.3 ENSMUST00000191100.2 |
||
| CDS-3UTR GCA 90 bp | GTTACATTTGAGTTCTCACTGAGACTTGTTAACAGAACAGGTAGCCATTTTAATCACTGCGGCTGCAGCTaGAGGGGACAGCAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTFEFSLRLVNRTGSHFNHCGCS*RGQQPP Trigger: TGGAGGCTGCTGTCCCCTGCAGCTGCAGCCGCAGTG...ATTAAAATGGCTACCTGTTCTGTTAACAAGTCTCAGTGAGAACTCAAATGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
||
| CDS-3UTR GCA 90 bp | TCTGATAGCAATGTATCCACGGGCTTTCAGAAAGCTCTGAAATCCCTGAGGAGTATGTCCAACAAACGCTaGACTCATCCACGCTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SDSNVSTGFQKALKSLRSMSNKR*THPRCR Trigger: TCGACAGCGTGGATGAGTGCAGCGTTTGTTGGACAT...ACTCCTCAGGGATTTCAGAGCTTTCTGAAAGCCCGTGGATACATTGCTATCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111769.11 |
||
| CDS-3UTR CCA 90 bp | TTTGCTGTTGGGAGATTCATGGTGATTCCTCCAGAGGATTGGGTAGAGCTAAGGTCACCACAGCAGCTTTaGTATCTGTTTTGGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FAVGRFMVIPPEDWVELRSPQQL*YLFWLC Trigger: ACAGAGCCAAAACAGATACCAAAGCTGCTGTGGTGA...CCTTAGCTCTACCCAATCCTCTGGAGGAATCACCATGAATCTCCCAACAGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111769.11 |
||
| 3UTR CAA 72 bp | CATGTGACATCTGCTCTCCCTGTGACTCATCCTCTCTaGCTGTGGGTTCTTGGATTTGTTGCAGCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HVTSALPVTHPL*LWVLGFVAAFS Trigger: AGAAAATGCTGCAACAAATCCAAGAACCCACAGCAAGAGAGGATGAGTCACAGGGAGAGCAGATGTCACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
||
| CDS-3UTR TCA 90 bp | CCTGTGACTCATCCTCTCTTGCTGTGGGTTCTTGGATTTGTTGCAGCATTTTCTCCGTTTTCAAGGAACTaGGATTCTTCAGGGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: PVTHPLLLWVLGFVAAFSPFSRN*DSSGKS Trigger: GGATTTCCCTGAAGAATCTCAGTTCCTTGAAAACGG...AGAAAATGCTGCAACAAATCCAAGAACCCACAGCAAGAGAGGATGAGTCACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
||
| CDS-3UTR CCA 90 bp | CTTTCAGAAAGCTCTGAAATCCCTGAGGAGTTTTTGTCTCACCCTCTGAAACACAGGACAAAGTATTCCTaGCCAACTTGGCCAATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSESSEIPEEFLSHPLKHRTKYS*PTWPIP Trigger: CGGAATTGGCCAAGTTGGCCAGGAATACTTTGTCCT...GTGTTTCAGAGGGTGAGACAAAAACTCCTCAGGGATTTCAGAGCTTTCTGAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111769.11 |
||
| CDS-3UTR CCA 90 bp | TTTGCTGTTGGGAGATTCATGGTGATTCCTCCAGAGGATTGGGTAGAGCTAAGGCTTTGGTATCTGTTTTaGCTCTGTTCGGCTTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: FAVGRFMVIPPEDWVELRLWYLF*LCSALT Trigger: TGTCAAAGCCGAACAGAGCCAAAACAGATACCAAAG...CCTTAGCTCTACCCAATCCTCTGGAGGAATCACCATGAATCTCCCAACAGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111769.11 |
||
| 3UTR CAA 72 bp | ACAGGGTGGGATTCAACCGTGGTGTGCGAGGAACTTTaGAATTTGACAGATTTTTCCTTCTGTAGTATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TGWDSTVVCEEL*NLTDFSFCSIR Trigger: CCGAATACTACAGAAGGAAAAATCTGTCAAATTCAAAAGTTCCTCGCACACCACGGTTGAATCCCACCCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
||
| CDS-3UTR GCA 90 bp | GTTACATTTGAGTTCTCACTGAGACTTGTTAACAGAACAGGTAGCCATTTTAATATGTCCAACAAACGCTaGACTCATCCACGCTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VTFEFSLRLVNRTGSHFNMSNKR*THPRCR Trigger: TCGACAGCGTGGATGAGTGCAGCGTTTGTTGGACAT...ATTAAAATGGCTACCTGTTCTGTTAACAAGTCTCAGTGAGAACTCAAATGTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
||
| CDS-3UTR GCA 90 bp | TCATTAGAGAACAGGGTGGGATTCAACCGTGGTGTGCGAGGAACTTTTGAATTTTTAATTTTGGAAACTTaGATCCCTTTCTTGGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SLENRVGFNRGVRGTFEFLILET*IPFLVT Trigger: GGTGACCAAGAAAGGGATGCAAGTTTCCAAAATTAA...AAATTCAAAAGTTCCTCGCACACCACGGTTGAATCCCACCCTGTTCTCTAATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111769.11 |
||
| CDS-3UTR CCA 90 bp | GTTACATTTGAGTTCTCACTGAGACTTGTTAACAGAACAGGTAGCCATTTTAATCTTGCATCCCTTTCTTaGTCACCACAGCAGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTFEFSLRLVNRTGSHFNLASLS*SPQQLW Trigger: CCAAAGCTGCTGTGGTGACCAAGAAAGGGATGCAAG...ATTAAAATGGCTACCTGTTCTGTTAACAAGTCTCAGTGAGAACTCAAATGTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
||
| CDS-3UTR CCA 90 bp | CAAACTTATATGCCACTTGATAGACTCTCAAAGCCATGGACATTCATAAAGTATAGGACAAAGTATTCCTaGCCAACTTGGCCAATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QTYMPLDRLSKPWTFIKYRTKYS*PTWPIP Trigger: CGGAATTGGCCAAGTTGGCCAGGAATACTTTGTCCT...ATACTTTATGAATGTCCATGGCTTTGAGAGTCTATCAAGTGGCATATAAGTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAGTTCTCACTGAGACTTGTTAACAGAACAGGTAGCCATTTTAATAGTTCTATGGTAGCTCTGAAATaGGCTGCCTGTAGGAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: FEFSLRLVNRTGSHFNSSMVALK*AACRRF Trigger: GAATCTCCTACAGGCAGCCCATTTCAGAGCTACCAT...AGAACTATTAAAATGGCTACCTGTTCTGTTAACAAGTCTCAGTGAGAACTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
||
| CDS-3UTR TCA 90 bp | CAAACTTATATGCCACTTGATAGACTCTCAAAGCCATGGACATTCATAAAGTATCCGTTTTCAAGGAACTaGGATTCTTCAGGGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: QTYMPLDRLSKPWTFIKYPFSRN*DSSGKS Trigger: GGATTTCCCTGAAGAATCTCAGTTCCTTGAAAACGG...ATACTTTATGAATGTCCATGGCTTTGAGAGTCTATCAAGTGGCATATAAGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
||
| CDS-3UTR CCA 90 bp | TTTGAGTTCTCACTGAGACTTGTTAACAGAACAGGTAGCCATTTTAATAGTTCTCATCCTCTCTTGCTGTaGGTTCTTGGATTTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FEFSLRLVNRTGSHFNSSHPLLL*VLGFVA Trigger: TGCAACAAATCCAAGAACCCACAGCAAGAGAGGATG...AGAACTATTAAAATGGCTACCTGTTCTGTTAACAAGTCTCAGTGAGAACTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
||
| CDS-3UTR CCA 90 bp | GTTACATTTGAGTTCTCACTGAGACTTGTTAACAGAACAGGTAGCCATTTTAATCTTTGGTATCTGTTTTaGCTCTGTTCGGCTTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: VTFEFSLRLVNRTGSHFNLWYLF*LCSALT Trigger: TGTCAAAGCCGAACAGAGCCAAAACAGATACCAAAG...ATTAAAATGGCTACCTGTTCTGTTAACAAGTCTCAGTGAGAACTCAAATGTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
||
| CDS-3UTR GCA 90 bp | TTTGAGTTCTCACTGAGACTTGTTAACAGAACAGGTAGCCATTTTAATAGTTCTGGTTCTTGGATTTGTTaGAGCATTTTCTCCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FEFSLRLVNRTGSHFNSSGSWIC*SIFSSS Trigger: AGAACTGGAGAAAATGCTGCAACAAATCCAAGAACC...AGAACTATTAAAATGGCTACCTGTTCTGTTAACAAGTCTCAGTGAGAACTCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
||
| CDS-3UTR GCA 90 bp | GTTACATTTGAGTTCTCACTGAGACTTGTTAACAGAACAGGTAGCCATTTTAATTTAATTTTGGAAACTTaGATCCCTTTCTTGGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VTFEFSLRLVNRTGSHFNLILET*IPFLVT Trigger: GGTGACCAAGAAAGGGATGCAAGTTTCCAAAATTAA...ATTAAAATGGCTACCTGTTCTGTTAACAAGTCTCAGTGAGAACTCAAATGTAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
||
| CDS TCA 90 bp | GCCTGTAGGAGATTCCGGGCTGCACTGAGACAACTGCTCTCCCTGTaGCTCATCCTCTCTTGCTGTGGGTTCTTGGATTTGTTGCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: ACRRFRAALRQLLSL*LILSCCGFLDLLQH Trigger: ATGCTGCAACAAATCCAAGAACCCACAGCAAGAGAGGATGAGTCACAGGGAGAGCAGTTGTCTCAGTGCAGCCCGGAATCTCCTACAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
||
| CDS CCA 90 bp | TGCACCATCAGGCACAATATAGTCCTCTTCATGGTAGCTCTGAAATaGGCTGCCTGTAGGAGATTCCGGGCTGCACTGAGACAACTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CTIRHNIVLFMVALK*AACRRFRAALRQLL Trigger: GAGCAGTTGTCTCAGTGCAGCCCGGAATCTCCTACAGGCAGCCCATTTCAGAGCTACCATGAAGAGGACTATATTGTGCCTGATGGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTTCAGGACCCTCTAGAACTCACTCCTGTGGACGATGCTCCCAGCTCTGTGGCTCTCATTCTCACATaGTACCCATGTTCTGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VLQDPLELTPVDDAPSSVALILT*YPCSVH Trigger: GTGCACAGAACATGGGTACAATGTGAGAATGAGAGC...CACAGAGCTGGGAGCATCGTCCACAGGAGTGAGTTCTAGAGGGTCCTGAAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
||
| CDS GCA 90 bp | CTCGAGGGCACTTCTATACCACCTCTTCTTCTTCGTACAGTCTGCTaGCTTGGCCAATTCCGTAATTTTACCAAAACCAGGCTTCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LEGTSIPPLLLRTVC*LGQFRNFTKTRLPR Trigger: TCTCGGAAGCCTGGTTTTGGTAAAATTACGGAATTGGCCAAGGCAGCAGACTGTACGAAGAAGAAGAGGTGGTATAGAAGTGCCCTCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187803.3 ENSMUST00000191100.2 |
||
| CDS GCA 90 bp | TTCCTCGAGGGCACTTCTATACCACCTCTTCTTCTTCGTACAGTCTaGTGCCTTGGCCAATTCCGTAATTTTACCAAAACCAGGCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: FLEGTSIPPLLLRTV*CLGQFRNFTKTRLP Trigger: CGGAAGCCTGGTTTTGGTAAAATTACGGAATTGGCCAAGGCAGCAGACTGTACGAAGAAGAAGAGGTGGTATAGAAGTGCCCTCGAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187803.3 ENSMUST00000191100.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCAGCTTTGGTATCTGTTTTGGCTCTGTTCGGCTTTGACAGGCAGCACACTGCTCTCATTCTCACATaGTACCCATGTTCTGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TAALVSVLALFGFDRQHTALILT*YPCSVH Trigger: GTGCACAGAACATGGGTACAATGTGAGAATGAGAGC...AGTGTGCTGCCTGTCAAAGCCGAACAGAGCCAAAACAGATACCAAAGCTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187803.3 ENSMUST00000191100.2 |
||
| CDS CCA 90 bp | TGCACTGAGACAACTGCTCTCCCTGTGACTCATCCTCTCTTGCTGTaGGTTCTTGGATTTGTTGCAGCATTTTCTCCAGTTCTTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CTETTALPVTHPLLL*VLGFVAAFSPVLSA Trigger: TGCTGAAAGAACTGGAGAAAATGCTGCAACAAATCCAAGAACCCACAGCAAGAGAGGATGAGTCACAGGGAGAGCAGTTGTCTCAGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCAGCTAAGATTTGCTGTTGGGAGATTCATGGTGATTCCTCCAGAGGATTGGCTCTCATTCTCACATaGTACCCATGTTCTGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SPAKICCWEIHGDSSRGLALILT*YPCSVH Trigger: GTGCACAGAACATGGGTACAATGTGAGAATGAGAGC...CAATCCTCTGGAGGAATCACCATGAATCTCCCAACAGCAAATCTTAGCTGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 |
||
| CDS CCA 90 bp | GACAACTGCTCTCCCTGTGACTCATCCTCTCTTGCTGTGGGTTCTTaGATTTGTTGCAGCATTTTCTCCAGTTCTTTCAGCAAACCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: DNCSPCDSSSLAVGS*ICCSIFSSSFSKPS Trigger: TGAAGGTTTGCTGAAAGAACTGGAGAAAATGCTGCAACAAATCCAAGAACCCACAGCAAGAGAGGATGAGTCACAGGGAGAGCAGTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTGACTCATCCTCTCTTGCTGTGGGTTCTTGGATTTGTTGCAGCATTTTCTATTAATTTTGGAAACTaGCATCCCTTTCTTGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PVTHPLLLWVLGFVAAFSINFGN*HPFLGH Trigger: GTGACCAAGAAAGGGATGCAAGTTTCCAAAATTAAT...AGAAAATGCTGCAACAAATCCAAGAACCCACAGCAAGAGAGGATGAGTCACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111769.11 |
||
| CDS TCA 90 bp | ACTTTTCAACATTTCCATCCTGGTCATAGGTTACATATTTCCCTTTaGAAGGATCAGGACAAAGTATTCCTGGCCAACTTGGCCAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: TFQHFHPGHRLHISL*KDQDKVFLANLANS Trigger: GGAATTGGCCAAGTTGGCCAGGAATACTTTGTCCTGATCCTTTCAAAGGGAAATATGTAACCTATGACCAGGATGGAAATGTTGAAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111769.11 ENSMUST00000238919.2 |
||
| CDS-3UTR CAA 90 bp | CAAACTTATATGCCACTTGATAGACTCTCAAAGCCATGGACATTCATAAAGTATGCTCTCATTCTCACATaGTACCCATGTTCTGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QTYMPLDRLSKPWTFIKYALILT*YPCSVH Trigger: GTGCACAGAACATGGGTACAATGTGAGAATGAGAGC...ATACTTTATGAATGTCCATGGCTTTGAGAGTCTATCAAGTGGCATATAAGTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
||
| CDS-3UTR CAA 90 bp | TTTGAGTTCTCACTGAGACTTGTTAACAGAACAGGTAGCCATTTTAATAGTTCTGTGACTCATCCTCTCTaGCTGTGGGTTCTTGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: FEFSLRLVNRTGSHFNSSVTHPL*LWVLGF Trigger: AAATCCAAGAACCCACAGCAAGAGAGGATGAGTCAC...AGAACTATTAAAATGGCTACCTGTTCTGTTAACAAGTCTCAGTGAGAACTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
||
| CDS-3UTR CAA 90 bp | CAAACTTATATGCCACTTGATAGACTCTCAAAGCCATGGACATTCATAAAGTATGGGTTCTTGGATTTGTaGCAGCATTTTCTCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QTYMPLDRLSKPWTFIKYGFLDL*QHFLQF Trigger: GAACTGGAGAAAATGCTGCAACAAATCCAAGAACCC...ATACTTTATGAATGTCCATGGCTTTGAGAGTCTATCAAGTGGCATATAAGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
||
| CDS-3UTR CAA 90 bp | GTTACATTTGAGTTCTCACTGAGACTTGTTAACAGAACAGGTAGCCATTTTAATCAACCATGTTTTCCTTaGATAGGGCTTCATCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VTFEFSLRLVNRTGSHFNQPCFP*IGLHQN Trigger: GTTCTGATGAAGCCCTATCAAAGGAAAACATGGTTG...ATTAAAATGGCTACCTGTTCTGTTAACAAGTCTCAGTGAGAACTCAAATGTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
||
| CDS GCA 72 bp | GTACCAGGGCTCGCTGGGGTTCACTGCGGCTGCAGCTaGAGGGGACAGCAGCCTCCATTTCAGGCAGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VPGLAGVHCGCS*RGQQPPFQAAL Trigger: GAGAGCTGCCTGAAATGGAGGCTGCTGTCCCCTGCAGCTGCAGCCGCAGTGAACCCCAGCGAGCCCTGGTAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 ENSMUST00000191100.2 ENSMUST00000238919.2 |
||
| CDS GCA 72 bp | GTTCATGAAGCAGTACCAGGGCTCGCTGGGGTTCACTaGGGCTGCAGCTGCAGGGGACAGCAGCCTCCATTT | + |
|
Preference number: 6 (lower is better) Translates to: VHEAVPGLAGVH*GCSCRGQQPPF Trigger: AAATGGAGGCTGCTGTCCCCTGCAGCTGCAGCCGCAGTGAACCCCAGCGAGCCCTGGTACTGCTTCATGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111769.11 ENSMUST00000187803.3 ENSMUST00000191100.2 ENSMUST00000238919.2 |
||
| CDS CAA 72 bp | CAGCAGCCTCCATTTCAGGCAGCTCTCATTCTCACATaGTACCCATGTTCTGTGCACGAACTCGCTGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: QQPPFQAALILT*YPCSVHELAAL Trigger: GAGAGCAGCGAGTTCGTGCACAGAACATGGGTACAATGTGAGAATGAGAGCTGCCTGAAATGGAGGCTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187803.3 ENSMUST00000191100.2 ENSMUST00000238919.2 |
||
| CDS CAA 90 bp | CCGGGCTGCACTGAGACAACTGCTCTCCCTGTGACTCATCCTCTCTaGCTGTGGGTTCTTGGATTTGTTGCAGCATTTTCTCCAGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PGCTETTALPVTHPL*LWVLGFVAAFSPVL Trigger: AAGAACTGGAGAAAATGCTGCAACAAATCCAAGAACCCACAGCAAGAGAGGATGAGTCACAGGGAGAGCAGTTGTCTCAGTGCAGCCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
||
| CDS CAA 90 bp | AGGGCACTTCTATACCACCTCTTCTTCTTCGTACAGTCTGCTGCCTaGGCCAATTCCGTAATTTTACCAAAACCAGGCTTCCGAGAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: RALLYHLFFFVQSAA*ANSVILPKPGFREV Trigger: TACCTCTCGGAAGCCTGGTTTTGGTAAAATTACGGAATTGGCCAAGGCAGCAGACTGTACGAAGAAGAAGAGGTGGTATAGAAGTGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187803.3 ENSMUST00000191100.2 |
||
| CDS CCA 72 bp | ACAACTGCTCTCCCTGTGACTCATCCTCTCTTGCTGTaGGTTCTTGGATTTGTTGCAGCATTTTCTCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: TTALPVTHPLLL*VLGFVAAFSPV Trigger: AACTGGAGAAAATGCTGCAACAAATCCAAGAACCCACAGCAAGAGAGGATGAGTCACAGGGAGAGCAGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
||
| CDS CAA 72 bp | ACTGAGACAACTGCTCTCCCTGTGACTCATCCTCTCTaGCTGTGGGTTCTTGGATTTGTTGCAGCATTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: TETTALPVTHPL*LWVLGFVAAFS Trigger: AGAAAATGCTGCAACAAATCCAAGAACCCACAGCAAGAGAGGATGAGTCACAGGGAGAGCAGTTGTCTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238919.2 |
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| CDS GCA 72 bp | GGCACTTCTATACCACCTCTTCTTCTTCGTACAGTCTaGTGCCTTGGCCAATTCCGTAATTTTACCAAAACC | + |
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Preference number: 6 (lower is better) Translates to: GTSIPPLLLRTV*CLGQFRNFTKT Trigger: GGTTTTGGTAAAATTACGGAATTGGCCAAGGCAGCAGACTGTACGAAGAAGAAGAGGTGGTATAGAAGTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187803.3 ENSMUST00000191100.2 |
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| CDS CAA 72 bp | CTATACCACCTCTTCTTCTTCGTACAGTCTGCTGCCTaGGCCAATTCCGTAATTTTACCAAAACCAGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LYHLFFFVQSAA*ANSVILPKPGF Trigger: GAAGCCTGGTTTTGGTAAAATTACGGAATTGGCCAAGGCAGCAGACTGTACGAAGAAGAAGAGGTGGTATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187803.3 ENSMUST00000191100.2 |
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| CDS GCA 72 bp | ACTTCTATACCACCTCTTCTTCTTCGTACAGTCTGCTaGCTTGGCCAATTCCGTAATTTTACCAAAACCAGG | + |
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Preference number: 6 (lower is better) Translates to: TSIPPLLLRTVC*LGQFRNFTKTR Trigger: CCTGGTTTTGGTAAAATTACGGAATTGGCCAAGGCAGCAGACTGTACGAAGAAGAAGAGGTGGTATAGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187803.3 ENSMUST00000191100.2 |
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