Pregenerated sensors for ZCWPW1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037108Ensembl transcript IDs: ENSMUST00000035852.14, ENSMUST00000141642.2
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGAAATaGGAGGCTCTCCCTGCAGGCAAACAACAGCAGGGGGACCAGAAT | + |
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Preference number: 1 (lower is better) Translates to: EQVNNPNIYQLLGKK*EALPAGKQQQGDQN Trigger: ATTCTGGTCCCCCTGCTGTTGTTTGCCTGCAGGGAGAGCCTCTCATTTCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| 3UTR-3UTR GCA 90 bp | GACTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAATGAGAGGCTCTCCCTaGAGGCAAACAACAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: DLNNRAGQQPQHLSAAREMRGSP*RQTTAG Trigger: CCCTGCTGTTGTTTGCCTGCAGGGAGAGCCTCTCAT...TTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| 3UTR GCA 72 bp | CAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTaGTCGGGAAGAAATGAGAGGCTCTCCCTGCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: QQSRSTTPTFIS*SGRNERLSLQA Trigger: TGCCTGCAGGGAGAGCCTCTCATTTCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| 3UTR GCA 72 bp | GGAGTAATTCCAGAGACCTGCTTTATTAACCCAGGCTaGACAGCTGACTTGAACAACAGAGCAGGTCAACAA | + |
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Preference number: 3 (lower is better) Translates to: GVIPETCFINPG*TADLNNRAGQQ Trigger: TTGTTGACCTGCTCTGTTGTTCAAGTCAGCTGTGCAGCCTGGGTTAATAAAGCAGGTCTCTGGAATTACTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| 3UTR TCA 72 bp | AGACCTGCTTTATTAACCCAGGCTGCACAGCTGACTTaGACAACAGAGCAGGTCAACAACCCCAACATTTAT | + |
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Preference number: 3 (lower is better) Translates to: RPALLTQAAQLT*TTEQVNNPNIY Trigger: ATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTCAGCTGTGCAGCCTGGGTTAATAAAGCAGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CCA 90 bp | AACCCAGGCTGCACAGCTGACTTGAACAACAGAGCAGGTCAACAACCCCAACATGGCTTTGAGCAGGCTTaGCTTGGTCTCTGCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: NPGCTADLNNRAGQQPQHGFEQA*LGLCLW Trigger: CCAGAGGCAGAGACCAAGCCAAGCCTGCTCAAAGCC...ATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTCAGCTGTGCAGCCTGGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CCA 90 bp | ACATTTATCAGCTGCTCGGGAAGAAATGAGAGGCTCTCCCTGCAGGCAAACAACCCTTCCCTCCCAGTGTaGGTACAGGAGGGACTGTGG | + |
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Preference number: 4 (lower is better) Translates to: TFISCSGRNERLSLQANNPSLPV*VQEGLW Trigger: CCACAGTCCCTCCTGTACCCACACTGGGAGGGAAGG...GTTGTTTGCCTGCAGGGAGAGCCTCTCATTTCTTCCCGAGCAGCTGATAAATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR GCA 90 bp | CCAACATTTATCAGCTGCTCGGGAAGAAATGAGAGGCTCTCCCTGCAGGCAAACAGGTCTGAGTTCCCCTaGTCTTCCTTCCCTCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: PTFISCSGRNERLSLQANRSEFP*SSFPPS Trigger: ACTGGGAGGGAAGGAAGAGCAGGGGAACTCAGACCT...GTTTGCCTGCAGGGAGAGCCTCTCATTTCTTCCCGAGCAGCTGATAAATGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR TCA 90 bp | TTTATCAGCTGCTCGGGAAGAAATGAGAGGCTCTCCCTGCAGGCAAACAACAGCATTGCTTGGCCCAGATaGTGGATCCTGGGACATAGG | + |
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Preference number: 4 (lower is better) Translates to: FISCSGRNERLSLQANNSIAWPR*WILGHR Trigger: CCTATGTCCCAGGATCCATCATCTGGGCCAAGCAAT...GCTGTTGTTTGCCTGCAGGGAGAGCCTCTCATTTCTTCCCGAGCAGCTGATAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR GCA 90 bp | CAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGAAATGAGGCTTGGCTTGGTCTCTaGCTCTGGAGAACTGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: QQSRSTTPTFISCSGRNEAWLGL*LWRTGP Trigger: GGGACCAGTTCTCCAGAGGCAGAGACCAAGCCAAGC...CTCATTTCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR GCA 90 bp | ACATTTATCAGCTGCTCGGGAAGAAATGAGAGGCTCTCCCTGCAGGCAAACAACGAGCTGCCTCTCTGCTaGATCTCCCCTCTCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: TFISCSGRNERLSLQANNELPLC*ISPLSS Trigger: AGAAGAGAGAGGGGAGATGCAGCAGAGAGGCAGCTC...GTTGTTTGCCTGCAGGGAGAGCCTCTCATTTCTTCCCGAGCAGCTGATAAATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR GCA 90 bp | CTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGAGGAACTCCTCTGAGCTaGCTCTCTGCTGCATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LEQQSRSTTPTFISCSGRGTPLS*LSAASP Trigger: GGGAGATGCAGCAGAGAGGCAGCTCAGAGGAGTTCC...TCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CCA 90 bp | AACCCAGGCTGCACAGCTGACTTGAACAACAGAGCAGGTCAACAACCCCAACATCCTCCTTCCATGAGCTaGGCTGAGGTTTCTCGCTAT | + |
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Preference number: 4 (lower is better) Translates to: NPGCTADLNNRAGQQPQHPPSMS*AEVSRY Trigger: ATAGCGAGAAACCTCAGCCCAGCTCATGGAAGGAGG...ATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTCAGCTGTGCAGCCTGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR TCA 90 bp | CCAACATTTATCAGCTGCTCGGGAAGAAATGAGAGGCTCTCCCTGCAGGCAAACTCTTTAAGCTGGCTTTaGGCAGGCTTGGCTTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: PTFISCSGRNERLSLQANSLSWL*AGLAWS Trigger: AGACCAAGCCAAGCCTGCTCAAAGCCAGCTTAAAGA...GTTTGCCTGCAGGGAGAGCCTCTCATTTCTTCCCGAGCAGCTGATAAATGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR TCA 90 bp | TTTATCAGCTGCTCGGGAAGAAATGAGAGGCTCTCCCTGCAGGCAAACAACAGCAACACTGAACCCAGATaGCACAGTGGCCAAAACCAC | + |
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Preference number: 4 (lower is better) Translates to: FISCSGRNERLSLQANNSNTEPR*HSGQNH Trigger: GTGGTTTTGGCCACTGTGTCATCTGGGTTCAGTGTT...GCTGTTGTTTGCCTGCAGGGAGAGCCTCTCATTTCTTCCCGAGCAGCTGATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR GCA 90 bp | CCAACATTTATCAGCTGCTCGGGAAGAAATGAGAGGCTCTCCCTGCAGGCAAACGTCTCCAAGCACTCCTaGAGGGACTTCTGTAGTACA | + |
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Preference number: 4 (lower is better) Translates to: PTFISCSGRNERLSLQANVSKHS*RDFCST Trigger: TGTACTACAGAAGTCCCTGCAGGAGTGCTTGGAGAC...GTTTGCCTGCAGGGAGAGCCTCTCATTTCTTCCCGAGCAGCTGATAAATGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR GCA 90 bp | CTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGAATCACTCTCGCACCCTaGCCAGCTCTCCTCAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: LEQQSRSTTPTFISCSGRITLAP*PALLRN Trigger: ATTCCTGAGGAGAGCTGGGCAGGGTGCGAGAGTGAT...TCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR GCA 90 bp | GACTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGCGGACTGGGATCCATaGACGAGAAACCGTTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: DLNNRAGQQPQHLSAAREADWDP*TRNRFS Trigger: GGAGAAACGGTTTCTCGTGCATGGATCCCAGTCCGC...TTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR GCA 90 bp | GACTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAATCTGAGCTGCCTCTCTaGTGCATCTCCCCTCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: DLNNRAGQQPQHLSAARESELPL*CISPLS Trigger: AGAGAGAGGGGAGATGCAGCAGAGAGGCAGCTCAGA...TTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CCA 90 bp | CAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGAAATGAGCCCTTCCTTTCCCAATaGACAAGCCCCATGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: QQSRSTTPTFISCSGRNEPFLSQ*TSPMLS Trigger: GCTCAGCATGGGGCTTGTCCATTGGGAAAGGAAGGG...CTCATTTCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR TCA 90 bp | AACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGAAATGAGAAGCCCCATGCTGAGCTaGTGGAGTAGGGCATTTGGA | + |
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Preference number: 4 (lower is better) Translates to: NRAGQQPQHLSAAREEMRSPMLS*WSRAFG Trigger: TCCAAATGCCCTACTCCATCAGCTCAGCATGGGGCT...TCTCATTTCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR GCA 90 bp | AACCCAGGCTGCACAGCTGACTTGAACAACAGAGCAGGTCAACAACCCCAACATGGAAGTTCTTTAACATaGGGACTGGGATCCATGCAC | + |
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Preference number: 4 (lower is better) Translates to: NPGCTADLNNRAGQQPQHGSSLT*GLGSMH Trigger: GTGCATGGATCCCAGTCCGCATGTTAAAGAACTTCC...ATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTCAGCTGTGCAGCCTGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CCA 90 bp | CAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGAAATGAGCCTTTCCTTTCTTCTTaGCTGGCTGGTCCTGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: QQSRSTTPTFISCSGRNEPFLSS*LAGPEP Trigger: AGGCTCAGGACCAGCCAGCCAAGAAGAAAGGAAAGG...CTCATTTCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CCA 90 bp | GACTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAATGTGAGCCATCGCTATaGCTGCCTCCAGCTTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: DLNNRAGQQPQHLSAARECEPSL*LPPASD Trigger: ATCAGAAGCTGGAGGCAGCCATAGCGATGGCTCACA...TTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CCA 90 bp | TGCACAGCTGACTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTCCCGCTCCTGAATACTaGTCTGTTCTGCCCTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: CTADLNNRAGQQPQHLSAPAPEY*SVLPCE Trigger: CTCACAGGGCAGAACAGACCAGTATTCAGGAGCGGG...AGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTCAGCTGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR TCA 90 bp | ACATTTATCAGCTGCTCGGGAAGAAATGAGAGGCTCTCCCTGCAGGCAAACAACGCTGCCTCCAGCTTCTaGTTAGAGTTCTTGTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: TFISCSGRNERLSLQANNAASSF*LEFLFL Trigger: CAAGAACAAGAACTCTAATCAGAAGCTGGAGGCAGC...GTTGTTTGCCTGCAGGGAGAGCCTCTCATTTCTTCCCGAGCAGCTGATAAATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR GCA 90 bp | GAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGAAATCCCCTGTTTGGACCATaGTCTGTGGTTGGTTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: EQQSRSTTPTFISCSGRNPLFGP*SVVGFC Trigger: GCAGAAACCAACCACAGAGCATGGTCCAAACAGGGG...ATTTCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CCA 90 bp | TGCACAGCTGACTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGGTTCAGTAACTGGCTaGCCTAGCTTAGATGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: CTADLNNRAGQQPQHLSAGSVTG*PSLDVP Trigger: GGGGACATCTAAGCTAGGCCAGCCAGTTACTGAACC...AGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTCAGCTGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CCA 90 bp | GAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGAAATCGCAGTCTTCTTCTTTaGAGTCCCATCTGGTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: EQQSRSTTPTFISCSGRNRSLLL*SPIWSS Trigger: GGAGGACCAGATGGGACTCCAAAGAAGAAGACTGCG...ATTTCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CCA 90 bp | AACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGAAATGAGACCAAGTCCAGGTCACTaGAGCAATCATCGTCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: NRAGQQPQHLSAAREEMRPSPGH*SNHRQE Trigger: CTCCTGACGATGATTGCTCCAGTGACCTGGACTTGG...TCTCATTTCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR TCA 90 bp | AACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGAAATGAGACTTCCCCTTCCTCACTaGTGTCAGCTCCATTGTATC | + |
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Preference number: 4 (lower is better) Translates to: NRAGQQPQHLSAAREEMRLPLPH*CQLHCI Trigger: GATACAATGGAGCTGACATCAGTGAGGAAGGGGAAG...TCTCATTTCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR TCA 90 bp | TTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGAAGGACTGTGGATTCACTaGCCAGAGATTTCTTCGCAG | + |
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Preference number: 4 (lower is better) Translates to: LNNRAGQQPQHLSAAREEGLWIH*PEISSQ Trigger: CTGCGAAGAAATCTCTGGTCAGTGAATCCACAGTCC...TTCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR GCA 90 bp | CAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGAAATGAGAATACTGGTCTGTTCTaGCCTGTGAGCCATCGCTAT | + |
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Preference number: 4 (lower is better) Translates to: QQSRSTTPTFISCSGRNENTGLF*PVSHRY Trigger: ATAGCGATGGCTCACAGGGCAGAACAGACCAGTATT...CTCATTTCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CCA 90 bp | ACAGCTGACTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTTTTAGCTTTCTCTCCTaGCCCCTGTTTGGACCATGC | + |
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Preference number: 4 (lower is better) Translates to: TADLNNRAGQQPQHLSAAFSFLS*PLFGPC Trigger: GCATGGTCCAAACAGGGGCCAGGAGAGAAAGCTAAA...AGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTCAGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CCA 90 bp | TGCACAGCTGACTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTCTCCCCTCTCTCTTCTaGCTCTCCAATGTCTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: CTADLNNRAGQQPQHLSALPSLF*LSNVFH Trigger: ATGGAAGACATTGGAGAGCCAGAAGAGAGAGGGGAG...AGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTCAGCTGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR GCA 90 bp | TGCACAGCTGACTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTATGTCTTCCATGAGTTaGTCCAAGTCCAGGTCACTG | + |
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Preference number: 4 (lower is better) Translates to: CTADLNNRAGQQPQHLSAMSSMS*SKSRSL Trigger: CAGTGACCTGGACTTGGAGCAACTCATGGAAGACAT...AGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTCAGCTGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CCA 90 bp | AACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGAAATGAGATTGGACCATGCTCTGTaGTTGGTTTCTGCTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: NRAGQQPQHLSAAREEMRLDHAL*LVSAPS Trigger: AGAAGGAGCAGAAACCAACCACAGAGCATGGTCCAA...TCTCATTTCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CCA 90 bp | TTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGAACCACTTCTCACACTTTaGAGAGGAACACTGAACCCA | + |
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Preference number: 4 (lower is better) Translates to: LNNRAGQQPQHLSAAREEPLLTL*RGTLNP Trigger: TGGGTTCAGTGTTCCTCTCCAAAGTGTGAGAAGTGG...TTCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| 3UTR CAA 72 bp | GAGACCTGCTTTATTAACCCAGGCTGCACAGCTGACTaGAACAACAGAGCAGGTCAACAACCCCAACATTTA | + |
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Preference number: 4 (lower is better) Translates to: ETCFINPGCTAD*NNRAGQQPQHL Trigger: TAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTCAGCTGTGCAGCCTGGGTTAATAAAGCAGGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR GCA 90 bp | TGCACAGCTGACTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTATCTTTCTTATCAGTTaGAGGAGGAACAATGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: CTADLNNRAGQQPQHLSAIFLIS*RRNNAR Trigger: CCGGGCATTGTTCCTCCTGCAACTGATAAGAAAGAT...AGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTCAGCTGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CCA 90 bp | ACAGCTGACTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCACTCACGGCCATCTTaGATCTTCTCCATTTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: TADLNNRAGQQPQHLSAAHSRPS*IFSIFS Trigger: TGAGAAAATGGAGAAGATCCAAGATGGCCGTGAGTG...AGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTCAGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CCA 90 bp | CTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGAGGGTCTAGGCAAAGTTaGATCTTTCTTCTCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LEQQSRSTTPTFISCSGRGSRQS*IFLLFF Trigger: GAAGAAGAGAAGAAAGATCCAACTTTGCCTAGACCC...TCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CCA 90 bp | CTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGATCTCCTCAGATAAGTTaGTGGCTGAAGTCTTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LEQQSRSTTPTFISCSGRSPQIS*WLKSCS Trigger: AGAACAAGACTTCAGCCACCAACTTATCTGAGGAGA...TCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CCA 90 bp | TTTATCAGCTGCTCGGGAAGAAATGAGAGGCTCTCCCTGCAGGCAAACAACAGCAGTTATTACCTTCTCTaGATCAGCATCTTTCTTATC | + |
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Preference number: 4 (lower is better) Translates to: FISCSGRNERLSLQANNSSYYLL*ISIFLI Trigger: GATAAGAAAGATGCTGATCCAGAGAAGGTAATAACT...GCTGTTGTTTGCCTGCAGGGAGAGCCTCTCATTTCTTCCCGAGCAGCTGATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CCA 90 bp | GACTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAATTATAATTCGGATCTaGATTCTGGTCACAAGACCA | + |
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Preference number: 4 (lower is better) Translates to: DLNNRAGQQPQHLSAAREIIIRI*ILVTRP Trigger: TGGTCTTGTGACCAGAATCCAGATCCGAATTATAAT...TTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CCA 90 bp | GGCTGCACAGCTGACTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAAGAAGATGCAATCTTTaGAGTATCAGGAGTTATTAC | + |
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Preference number: 4 (lower is better) Translates to: GCTADLNNRAGQQPQHLSRRCNL*SIRSYY Trigger: GTAATAACTCCTGATACTCCAAAGATTGCATCTTCT...TGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTCAGCTGTGCAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS GCA 90 bp | CAAGTCCAGGTCACTGGAGCAATCATCGTCAGGAGGGAAACTTGCTaGCTCCTGTGTCGGGGGCATGTGGGGCACAAGCCCTTCCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: QVQVTGAIIVRRETC*LLCRGHVGHKPFLS Trigger: GGAAAGGAAGGGCTTGTGCCCCACATGCCCCCGACACAGGAGGCAGCAAGTTTCCCTCCTGACGATGATTGCTCCAGTGACCTGGACTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS GCA 90 bp | CTCCAAGTCCAGGTCACTGGAGCAATCATCGTCAGGAGGGAAACTTaGTGCCTCCTGTGTCGGGGGCATGTGGGGCACAAGCCCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LQVQVTGAIIVRRET*CLLCRGHVGHKPFL Trigger: AAGGAAGGGCTTGTGCCCCACATGCCCCCGACACAGGAGGCAGCAAGTTTCCCTCCTGACGATGATTGCTCCAGTGACCTGGACTTGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS CCA 90 bp | TGGCCACCATGGGTAGCCATATTGCTTGGCCCAGATGATGGATCCTaGGACATAGGAGGCATAGGCCACATCACTCTCGCACCCTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: WPPWVAILLGPDDGS*DIGGIGHITLAPCP Trigger: TGGGCAGGGTGCGAGAGTGATGTGGCCTATGCCTCCTATGTCCCAGGATCCATCATCTGGGCCAAGCAATATGGCTACCCATGGTGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035852.14 ENSMUST00000141642.2 |
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| CDS GCA 90 bp | TACTCCTCAAAGAGGGCCGCCAGGAACTCCTCTGAGCTGCCTCTCTaGTGCATCTCCCCTCTCTCTTCTGGCTCTCCAATGTCTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: YSSKRAARNSSELPL*CISPLSSGSPMSSM Trigger: CATGGAAGACATTGGAGAGCCAGAAGAGAGAGGGGAGATGCAGCAGAGAGGCAGCTCAGAGGAGTTCCTGGCGGCCCTCTTTGAGGAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS TCA 90 bp | TCTGGAGAACTGGTCCCTGGGGCGTCCTCCTTCCATGAGCTGGGCTaGGGTTTCTCGCTATGTAATTTTTGTGTAGGTGGAGCAAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SGELVPGASSFHELG*GFSLCNFCVGGAKV Trigger: AACCTTTGCTCCACCTACACAAAAATTACATAGCGAGAAACCTCAGCCCAGCTCATGGAAGGAGGACGCCCCAGGGACCAGTTCTCCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS GCA 90 bp | TTTCTCTCCTGGCCCCTGTTTGGACCATGCTCTGTGGTTGGTTTCTaGTCCTTCTTTAAGCTGGCTTTGAGCAGGCTTGGCTTGGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FLSWPLFGPCSVVGF*SFFKLALSRLGLVS Trigger: AGAGACCAAGCCAAGCCTGCTCAAAGCCAGCTTAAAGAAGGAGCAGAAACCAACCACAGAGCATGGTCCAAACAGGGGCCAGGAGAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS GCA 90 bp | TGCATCTCCCCTCTCTCTTCTGGCTCTCCAATGTCTTCCATGAGTTaGTCCAAGTCCAGGTCACTGGAGCAATCATCGTCAGGAGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: CISPLSSGSPMSSMS*SKSRSLEQSSSGGK Trigger: TTTCCCTCCTGACGATGATTGCTCCAGTGACCTGGACTTGGAGCAACTCATGGAAGACATTGGAGAGCCAGAAGAGAGAGGGGAGATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS GCA 90 bp | CCAGAAACCAAACAAGTTAACCCGCTCCTGAATACTGGTCTGTTCTaGCCTGTGAGCCATCGCTATGGCTGCCTCCAGCTTCTGATTAGA | + |
|
Preference number: 5 (lower is better) Translates to: PETKQVNPLLNTGLF*PVSHRYGCLQLLIR Trigger: TCTAATCAGAAGCTGGAGGCAGCCATAGCGATGGCTCACAGGGCAGAACAGACCAGTATTCAGGAGCGGGTTAACTTGTTTGGTTTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
||
| CDS-3UTR CAA 90 bp | AACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGAAATGAGATCTCCTGGCCCCTGTTaGGACCATGCTCTGTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NRAGQQPQHLSAAREEMRSPGPC*DHALWL Trigger: CAACCACAGAGCATGGTCCAAACAGGGGCCAGGAGA...TCTCATTTCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS CCA 90 bp | GGAACAATGCCCGGTTCTTCATCCAATTTGGTAGGTCTGATGTGTTaGACACAGGAAGAAGTCTCCAAGCACTCCTGCAGGGACTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GTMPGSSSNLVGLMC*TQEEVSKHSCRDFC Trigger: ACAGAAGTCCCTGCAGGAGTGCTTGGAGACTTCTTCCTGTGTCCAACACATCAGACCTACCAAATTGGATGAAGAACCGGGCATTGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
||
| CDS-3UTR CAA 90 bp | TGCACAGCTGACTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTTTGAGCAGGCTTGGCTaGGTCTCTGCCTCTGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CTADLNNRAGQQPQHLSALSRLG*VSASGE Trigger: TTCTCCAGAGGCAGAGACCAAGCCAAGCCTGCTCAA...AGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTCAGCTGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CAA 90 bp | AACCCAGGCTGCACAGCTGACTTGAACAACAGAGCAGGTCAACAACCCCAACATCATCTTTCTTATCAGTaGCAGGAGGAACAATGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: NPGCTADLNNRAGQQPQHHLSYQ*QEEQCP Trigger: CGGGCATTGTTCCTCCTGCAACTGATAAGAAAGATG...ATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTCAGCTGTGCAGCCTGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS TCA 90 bp | GGGCACAAGCCCTTCCTTTCCCAATGGACAAGCCCCATGCTGAGCTaGTGGAGTAGGGCATTTGGACACAATTTTAATTTCTTTCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GHKPFLSQWTSPMLS*WSRAFGHNFNFFLL Trigger: GAGGAGAAAGAAATTAAAATTGTGTCCAAATGCCCTACTCCATCAGCTCAGCATGGGGCTTGTCCATTGGGAAAGGAAGGGCTTGTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035852.14 ENSMUST00000141642.2 |
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| CDS CCA 90 bp | AAACCAAACAAGTTAACCCGCTCCACTAGCTCCAAAGACAGCTCCTaGAAGTTCTTTAACATGCGGACTGGGATCCATGCACGAGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: KPNKLTRSTSSKDSS*KFFNMRTGIHARET Trigger: GGTTTCTCGTGCATGGATCCCAGTCCGCATGTTAAAGAACTTCCAGGAGCTGTCTTTGGAGCTAGTGGAGCGGGTTAACTTGTTTGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141642.2 |
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| CDS-3UTR CAA 90 bp | ACAGCTGACTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTTCGCAGTCTTCTTCTTaGGAGTCCCATCTGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TADLNNRAGQQPQHLSAASQSSS*ESHLVL Trigger: GAGGACCAGATGGGACTCCAAAGAAGAAGACTGCGA...AGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTCAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CAA 90 bp | TTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGAATTCTTTAAGCTGGCTTaGAGCAGGCTTGGCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LNNRAGQQPQHLSAAREEFFKLA*SRLGLV Trigger: GACCAAGCCAAGCCTGCTCAAAGCCAGCTTAAAGAA...TTCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CAA 90 bp | CTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGAGACCATGCTCTGTGGTaGGTTTCTGCTCCTTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LEQQSRSTTPTFISCSGRDHALW*VSAPSL Trigger: TAAAGAAGGAGCAGAAACCAACCACAGAGCATGGTC...TCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CAA 90 bp | GAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGAAATGGTAGGTCTGATGTGTaGGACACAGGAAGAAGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: EQQSRSTTPTFISCSGRNGRSDV*DTGRSL Trigger: GAGACTTCTTCCTGTGTCCAACACATCAGACCTACC...ATTTCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CAA 90 bp | GACTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAATGCATTTTAGCTGGCTaGGGTCTAGGCAAAGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: DLNNRAGQQPQHLSAARECILAG*GLGKVG Trigger: TCCAACTTTGCCTAGACCCAAGCCAGCTAAAATGCA...TTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CAA 90 bp | AACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGAAATGAGAAATGTCTTCCATGAGTaGCTCCAAGTCCAGGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: NRAGQQPQHLSAAREEMRNVFHE*LQVQVT Trigger: AGTGACCTGGACTTGGAGCAACTCATGGAAGACATT...TCTCATTTCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS GCA 90 bp | GTAGGTCTGATGTGTTGGACACAGGAAGAAGTCTCCAAGCACTCCTaGAGGGACTTCTGTAGTACAATCTGGAAAATCTCCTCAAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: VGLMCWTQEEVSKHS*RDFCSTIWKISSNS Trigger: AGAATTTGAGGAGATTTTCCAGATTGTACTACAGAAGTCCCTGCAGGAGTGCTTGGAGACTTCTTCCTGTGTCCAACACATCAGACCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CAA 90 bp | CTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTGCTCGGGAAGATTGGTGGCTGAAGTCTaGTTCTCAGGAGCTTTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LEQQSRSTTPTFISCSGRLVAEV*FSGALN Trigger: ATTTAAAGCTCCTGAGAACAAGACTTCAGCCACCAA...TCTTCCCGAGCAGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CAA 90 bp | TGCACAGCTGACTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGCTTTCTCCTCAGATAAGTaGGTGGCTGAAGTCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CTADLNNRAGQQPQHLSAFSSDK*VAEVLF Trigger: GAACAAGACTTCAGCCACCAACTTATCTGAGGAGAA...AGCTGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTCAGCTGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS GCA 90 bp | TCTGAGACTGATCCTGAATCACTATCTTCTGTTTCTCCTTCAGACTaGACTCACGGCCATCTTGGATCTTCTCCATTTTCTCATCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SETDPESLSSVSPSD*THGHLGSSPFSHLQ Trigger: CTGAAGATGAGAAAATGGAGAAGATCCAAGATGGCCGTGAGTGCAGTCTGAAGGAGAAACAGAAGATAGTGATTCAGGATCAGTCTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CAA 90 bp | ACATTTATCAGCTGCTCGGGAAGAAATGAGAGGCTCTCCCTGCAGGCAAACAACGATGGAGTAGGGCATTaGGACACAATTTTAATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TFISCSGRNERLSLQANNDGVGH*DTILIS Trigger: AGAAATTAAAATTGTGTCCAAATGCCCTACTCCATC...GTTGTTTGCCTGCAGGGAGAGCCTCTCATTTCTTCCCGAGCAGCTGATAAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS GCA 90 bp | ATCAGGAGTTATTACCTTCTCTGGATCAGCATCTTTCTTATCAGTTaGAGGAGGAACAATGCCCGGTTCTTCATCCAATTTGGTAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: IRSYYLLWISIFLIS*RRNNARFFIQFGRS Trigger: AGACCTACCAAATTGGATGAAGAACCGGGCATTGTTCCTCCTGCAACTGATAAGAAAGATGCTGATCCAGAGAAGGTAATAACTCCTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS CCA 90 bp | GAAGAAGTCTCCAAGCACTCCTGCAGGGACTTCTGTAGTACAATCTaGAAAATCTCCTCAAATTCTGCACTGGTAAGAGTTCTTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: EEVSKHSCRDFCSTI*KISSNSALVRVLSF Trigger: AAAGGAAAGAACTCTTACCAGTGCAGAATTTGAGGAGATTTTCCAGATTGTACTACAGAAGTCCCTGCAGGAGTGCTTGGAGACTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS-3UTR CAA 90 bp | GGCTGCACAGCTGACTTGAACAACAGAGCAGGTCAACAACCCCAACATTTATCAGAGCAAAGGTTTTCTTaGTTCCCTTTTCGTATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GCTADLNNRAGQQPQHLSEQRFS*FPFRIL Trigger: AAGAATACGAAAAGGGAACAAAGAAAACCTTTGCTC...TGATAAATGTTGGGGTTGTTGACCTGCTCTGTTGTTCAAGTCAGCTGTGCAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS CCA 90 bp | AAAGAGAGTCTATTAAATTTCTTCTTAGAGGGTTCAGTAACTGGCTaGCCTAGCTTAGATGTCCCCATCTCAGAATTCACTTCCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KESLLNFFLEGSVTG*PSLDVPISEFTSSS Trigger: AGAAGAGGAAGTGAATTCTGAGATGGGGACATCTAAGCTAGGCCAGCCAGTTACTGAACCCTCTAAGAAGAAATTTAATAGACTCTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS GCA 72 bp | GTCACTGGAGCAATCATCGTCAGGAGGGAAACTTGCTaGCTCCTGTGTCGGGGGCATGTGGGGCACAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VTGAIIVRRETC*LLCRGHVGHKP Trigger: GGGCTTGTGCCCCACATGCCCCCGACACAGGAGGCAGCAAGTTTCCCTCCTGACGATGATTGCTCCAGTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS CAA 90 bp | GCTCCAAGTCCAGGTCACTGGAGCAATCATCGTCAGGAGGGAAACTaGCTGCCTCCTGTGTCGGGGGCATGTGGGGCACAAGCCCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: APSPGHWSNHRQEGN*LPPVSGACGAQALP Trigger: AGGAAGGGCTTGTGCCCCACATGCCCCCGACACAGGAGGCAGCAAGTTTCCCTCCTGACGATGATTGCTCCAGTGACCTGGACTTGGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS GCA 72 bp | CAGGTCACTGGAGCAATCATCGTCAGGAGGGAAACTTaGTGCCTCCTGTGTCGGGGGCATGTGGGGCACAAG | + |
|
Preference number: 6 (lower is better) Translates to: QVTGAIIVRRET*CLLCRGHVGHK Trigger: CTTGTGCCCCACATGCCCCCGACACAGGAGGCAGCAAGTTTCCCTCCTGACGATGATTGCTCCAGTGACCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS CAA 72 bp | CCAGGTCACTGGAGCAATCATCGTCAGGAGGGAAACTaGCTGCCTCCTGTGTCGGGGGCATGTGGGGCACAA | + |
|
Preference number: 6 (lower is better) Translates to: PGHWSNHRQEGN*LPPVSGACGAQ Trigger: TTGTGCCCCACATGCCCCCGACACAGGAGGCAGCAAGTTTCCCTCCTGACGATGATTGCTCCAGTGACCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS GCA 72 bp | TTCTTAGGGACTGGATGGTCCAGGTCTGAGTTCCCCTaGTCTTCCTTCCCTCCCAGTGTGGGTACAGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: FLGTGWSRSEFP*SSFPPSVGTGG Trigger: CCCTCCTGTACCCACACTGGGAGGGAAGGAAGAGCAGGGGAACTCAGACCTGGACCATCCAGTCCCTAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035852.14 ENSMUST00000141642.2 |
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| CDS CAA 72 bp | TGCTCCTTCTTTAAGCTGGCTTTGAGCAGGCTTGGCTaGGTCTCTGCCTCTGGAGAACTGGTCCCTGGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: CSFFKLALSRLG*VSASGELVPGA Trigger: CGCCCCAGGGACCAGTTCTCCAGAGGCAGAGACCAAGCCAAGCCTGCTCAAAGCCAGCTTAAAGAAGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS CAA 90 bp | GTTGGTTTCTGCTCCTTCTTTAAGCTGGCTTTGAGCAGGCTTGGCTaGGTCTCTGCCTCTGGAGAACTGGTCCCTGGGGCGTCCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VGFCSFFKLALSRLG*VSASGELVPGASSF Trigger: GAAGGAGGACGCCCCAGGGACCAGTTCTCCAGAGGCAGAGACCAAGCCAAGCCTGCTCAAAGCCAGCTTAAAGAAGGAGCAGAAACCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS TCA 72 bp | CTGGCCACCATGGGTAGCCATATTGCTTGGCCCAGATaGTGGATCCTGGGACATAGGAGGCATAGGCCACAT | + |
|
Preference number: 6 (lower is better) Translates to: LATMGSHIAWPR*WILGHRRHRPH Trigger: ATGTGGCCTATGCCTCCTATGTCCCAGGATCCATCATCTGGGCCAAGCAATATGGCTACCCATGGTGGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035852.14 ENSMUST00000141642.2 |
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| CDS CAA 90 bp | TGGCTGGCTGGTCCTGAGCCTTTAGCTTTCTCTCCTGGCCCCTGTTaGGACCATGCTCTGTGGTTGGTTTCTGCTCCTTCTTTAAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WLAGPEPLAFSPGPC*DHALWLVSAPSLSW Trigger: CCAGCTTAAAGAAGGAGCAGAAACCAACCACAGAGCATGGTCCAAACAGGGGCCAGGAGAGAAAGCTAAAGGCTCAGGACCAGCCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS TCA 72 bp | AGCTGCCGCCACTTCTCACACTTTGGAGAGGAACACTaGACCCAGATGACACAGTGGCCAAAACCACTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SCRHFSHFGEEH*TQMTQWPKPLS Trigger: GGAGAGTGGTTTTGGCCACTGTGTCATCTGGGTTCAGTGTTCCTCTCCAAAGTGTGAGAAGTGGCGGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS GCA 72 bp | TGGCCCCTGTTTGGACCATGCTCTGTGGTTGGTTTCTaGTCCTTCTTTAAGCTGGCTTTGAGCAGGCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: WPLFGPCSVVGF*SFFKLALSRLG Trigger: GCCAAGCCTGCTCAAAGCCAGCTTAAAGAAGGAGCAGAAACCAACCACAGAGCATGGTCCAAACAGGGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS GCA 72 bp | GACATAGGAGGCATAGGCCACATCACTCTCGCACCCTaGCCAGCTCTCCTCAGGAATGTCACAGCGATTATA | + |
|
Preference number: 6 (lower is better) Translates to: DIGGIGHITLAP*PALLRNVTAII Trigger: TATAATCGCTGTGACATTCCTGAGGAGAGCTGGGCAGGGTGCGAGAGTGATGTGGCCTATGCCTCCTATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS CCA 72 bp | TGGGTAGCCATATTGCTTGGCCCAGATGATGGATCCTaGGACATAGGAGGCATAGGCCACATCACTCTCGCA | + |
|
Preference number: 6 (lower is better) Translates to: WVAILLGPDDGS*DIGGIGHITLA Trigger: TGCGAGAGTGATGTGGCCTATGCCTCCTATGTCCCAGGATCCATCATCTGGGCCAAGCAATATGGCTACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035852.14 ENSMUST00000141642.2 |
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| CDS CAA 72 bp | GGTCCTGAGCCTTTAGCTTTCTCTCCTGGCCCCTGTTaGGACCATGCTCTGTGGTTGGTTTCTGCTCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GPEPLAFSPGPC*DHALWLVSAPS Trigger: AGAAGGAGCAGAAACCAACCACAGAGCATGGTCCAAACAGGGGCCAGGAGAGAAAGCTAAAGGCTCAGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS TCA 72 bp | CTCCCAGTGTGGGTACAGGAGGGACTGTGGATTCACTaGCCAGAGATTTCTTCGCAGTCTTCTTCTTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LPVWVQEGLWIH*PEISSQSSSLE Trigger: CTCCAAAGAAGAAGACTGCGAAGAAATCTCTGGTCAGTGAATCCACAGTCCCTCCTGTACCCACACTGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035852.14 ENSMUST00000141642.2 |
||
| CDS GCA 72 bp | GCCTTTAGCTTTCTCTCCTGGCCCCTGTTTGGACCATaGTCTGTGGTTGGTTTCTGCTCCTTCTTTAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AFSFLSWPLFGP*SVVGFCSFFKL Trigger: CAGCTTAAAGAAGGAGCAGAAACCAACCACAGAGCATGGTCCAAACAGGGGCCAGGAGAGAAAGCTAAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
||
| CDS GCA 72 bp | ACTGGTCTGTTCTGCCCTGTGAGCCATCGCTATGGCTaGCTCCAGCTTCTGATTAGAGTTCTTGTTCTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: TGLFCPVSHRYG*LQLLIRVLVLA Trigger: TGCAAGAACAAGAACTCTAATCAGAAGCTGGAGGCAGCCATAGCGATGGCTCACAGGGCAGAACAGACCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
||
| CDS CCA 72 bp | CCCGGTTCTTCATCCAATTTGGTAGGTCTGATGTGTTaGACACAGGAAGAAGTCTCCAAGCACTCCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PGSSSNLVGLMC*TQEEVSKHSCR Trigger: CCTGCAGGAGTGCTTGGAGACTTCTTCCTGTGTCCAACACATCAGACCTACCAAATTGGATGAAGAACCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
||
| CDS CAA 72 bp | GCCCGGTTCTTCATCCAATTTGGTAGGTCTGATGTGTaGGACACAGGAAGAAGTCTCCAAGCACTCCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ARFFIQFGRSDV*DTGRSLQALLQ Trigger: CTGCAGGAGTGCTTGGAGACTTCTTCCTGTGTCCAACACATCAGACCTACCAAATTGGATGAAGAACCGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS CAA 90 bp | AGGAACAATGCCCGGTTCTTCATCCAATTTGGTAGGTCTGATGTGTaGGACACAGGAAGAAGTCTCCAAGCACTCCTGCAGGGACTTCTG | + |
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Preference number: 6 (lower is better) Translates to: RNNARFFIQFGRSDV*DTGRSLQALLQGLL Trigger: CAGAAGTCCCTGCAGGAGTGCTTGGAGACTTCTTCCTGTGTCCAACACATCAGACCTACCAAATTGGATGAAGAACCGGGCATTGTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS GCA 72 bp | CTAGCTCCAAAGACAGCTCCTGGAAGTTCTTTAACATaGGGACTGGGATCCATGCACGAGAAACCGTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LAPKTAPGSSLT*GLGSMHEKPFL Trigger: GAGAAACGGTTTCTCGTGCATGGATCCCAGTCCGCATGTTAAAGAACTTCCAGGAGCTGTCTTTGGAGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035852.14 ENSMUST00000141642.2 |
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| CDS CCA 72 bp | CCTTCTCTTCCTTCTCCAGACAAGACTCAGGGTTGTTaGACTCACAGAGAGTCAAATCTTCCCCTTCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: PSLPSPDKTQGC*THRESNLPLPH Trigger: GTGAGGAAGGGGAAGATTTGACTCTCTGTGAGTCCAACAACCCTGAGTCTTGTCTGGAGAAGGAAGAGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035852.14 ENSMUST00000141642.2 |
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| CDS CAA 90 bp | TCCTCCTCTAAGTCCTTCTCTTCCTTCTCCAGACAAGACTCAGGGTaGTTGGACTCACAGAGAGTCAAATCTTCCCCTTCCTCACTGATG | + |
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Preference number: 6 (lower is better) Translates to: SSSKSFSSFSRQDSG*LDSQRVKSSPSSLM Trigger: CATCAGTGAGGAAGGGGAAGATTTGACTCTCTGTGAGTCCAACAACCCTGAGTCTTGTCTGGAGAAGGAAGAGAAGGACTTAGAGGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035852.14 ENSMUST00000141642.2 |
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| CDS TCA 72 bp | GGCCAAAACCACTCTCCTCTTCCTTCTGGGGACCTCTaGTCTGAGACTGATCCTGAATCACTATCTTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: GQNHSPLPSGDL*SETDPESLSSV Trigger: AACAGAAGATAGTGATTCAGGATCAGTCTCAGATCAGAGGTCCCCAGAAGGAAGAGGAGAGTGGTTTTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS TCA 72 bp | ACTTCTCACACTTTGGAGAGGAACACTGAACCCAGATaGCACAGTGGCCAAAACCACTCTCCTCTTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: TSHTLERNTEPR*HSGQNHSPLPS Trigger: AGAAGGAAGAGGAGAGTGGTTTTGGCCACTGTGTCATCTGGGTTCAGTGTTCCTCTCCAAAGTGTGAGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS TCA 72 bp | AATGTCACGTGGTACTTAGACGGCAGGGAATCAAGATaGGAAGCAAACAGAAAGTACTCCCCCAGGTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: NVTWYLDGRESR*EANRKYSPRSG Trigger: TCCTGACCTGGGGGAGTACTTTCTGTTTGCTTCTCATCTTGATTCCCTGCCGTCTAAGTACCACGTGACATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035852.14 ENSMUST00000141642.2 |
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| CDS TCA 72 bp | ACAAGCCCTTCCTTTCCCAATGGACAAGCCCCATGCTaGGCTGATGGAGTAGGGCATTTGGACACAATTTTA | + |
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Preference number: 6 (lower is better) Translates to: TSPSFPNGQAPC*ADGVGHLDTIL Trigger: TAAAATTGTGTCCAAATGCCCTACTCCATCAGCTCAGCATGGGGCTTGTCCATTGGGAAAGGAAGGGCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035852.14 ENSMUST00000141642.2 |
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| CDS CAA 72 bp | GTTGCAGGAGGAACAATGCCCGGTTCTTCATCCAATTaGGTAGGTCTGATGTGTTGGACACAGGAAGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: VAGGTMPGSSSN*VGLMCWTQEEV Trigger: GACTTCTTCCTGTGTCCAACACATCAGACCTACCAAATTGGATGAAGAACCGGGCATTGTTCCTCCTGCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS CAA 72 bp | AAGTCCTTCTCTTCCTTCTCCAGACAAGACTCAGGGTaGTTGGACTCACAGAGAGTCAAATCTTCCCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: KSFSSFSRQDSG*LDSQRVKSSPS Trigger: GGAAGGGGAAGATTTGACTCTCTGTGAGTCCAACAACCCTGAGTCTTGTCTGGAGAAGGAAGAGAAGGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035852.14 ENSMUST00000141642.2 |
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| CDS CAA 90 bp | TCCTCTAAGTCCTTCTCTTCCTTCTCCAGACAAGACTCAGGGTTGTaGGACTCACAGAGAGTCAAATCTTCCCCTTCCTCACTGATGTCA | + |
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Preference number: 6 (lower is better) Translates to: SSKSFSSFSRQDSGL*DSQRVKSSPSSLMS Trigger: TGACATCAGTGAGGAAGGGGAAGATTTGACTCTCTGTGAGTCCAACAACCCTGAGTCTTGTCTGGAGAAGGAAGAGAAGGACTTAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035852.14 ENSMUST00000141642.2 |
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| CDS TCA 72 bp | TGGACTCACAGAGAGTCAAATCTTCCCCTTCCTCACTaGTGTCAGCTCCATTGTATCGACTCCAGAAACCAA | + |
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Preference number: 6 (lower is better) Translates to: WTHRESNLPLPH*CQLHCIDSRNQ Trigger: TTGGTTTCTGGAGTCGATACAATGGAGCTGACATCAGTGAGGAAGGGGAAGATTTGACTCTCTGTGAGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035852.14 ENSMUST00000141642.2 |
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| CDS TCA 72 bp | CCCTTCCTTTCCCAATGGACAAGCCCCATGCTGAGCTaGTGGAGTAGGGCATTTGGACACAATTTTAATTTC | + |
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Preference number: 6 (lower is better) Translates to: PFLSQWTSPMLS*WSRAFGHNFNF Trigger: GAAATTAAAATTGTGTCCAAATGCCCTACTCCATCAGCTCAGCATGGGGCTTGTCCATTGGGAAAGGAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035852.14 ENSMUST00000141642.2 |
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| CDS GCA 72 bp | ATGTGTTGGACACAGGAAGAAGTCTCCAAGCACTCCTaGAGGGACTTCTGTAGTACAATCTGGAAAATCTCC | + |
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Preference number: 6 (lower is better) Translates to: MCWTQEEVSKHS*RDFCSTIWKIS Trigger: GGAGATTTTCCAGATTGTACTACAGAAGTCCCTGCAGGAGTGCTTGGAGACTTCTTCCTGTGTCCAACACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS CCA 72 bp | CTCCTCAGGAATGTCACAGCGATTATAATTCGGATCTaGATTCTGGTCACAAGACCAGTCGTCTGGAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: LLRNVTAIIIRI*ILVTRPVVWKN Trigger: GTTCTTCCAGACGACTGGTCTTGTGACCAGAATCCAGATCCGAATTATAATCGCTGTGACATTCCTGAGGAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS GCA 72 bp | GATCCTGAATCACTATCTTCTGTTTCTCCTTCAGACTaGACTCACGGCCATCTTGGATCTTCTCCATTTTCT | + |
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Preference number: 6 (lower is better) Translates to: DPESLSSVSPSD*THGHLGSSPFS Trigger: AGAAAATGGAGAAGATCCAAGATGGCCGTGAGTGCAGTCTGAAGGAGAAACAGAAGATAGTGATTCAGGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS CCA 72 bp | TCCAAGCACTCCTGCAGGGACTTCTGTAGTACAATCTaGAAAATCTCCTCAAATTCTGCACTGGTAAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: SKHSCRDFCSTI*KISSNSALVRV Trigger: AACTCTTACCAGTGCAGAATTTGAGGAGATTTTCCAGATTGTACTACAGAAGTCCCTGCAGGAGTGCTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS CAA 72 bp | CTTCTGTTTCTCCTTCAGACTGCACTCACGGCCATCTaGGATCTTCTCCATTTTCTCATCTTCAGCTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LLFLLQTALTAI*DLLHFLIFSFL Trigger: AAGAAAGCTGAAGATGAGAAAATGGAGAAGATCCAAGATGGCCGTGAGTGCAGTCTGAAGGAGAAACAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS GCA 72 bp | TATTACCTTCTCTGGATCAGCATCTTTCTTATCAGTTaGAGGAGGAACAATGCCCGGTTCTTCATCCAATTT | + |
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Preference number: 6 (lower is better) Translates to: YYLLWISIFLIS*RRNNARFFIQF Trigger: AAATTGGATGAAGAACCGGGCATTGTTCCTCCTGCAACTGATAAGAAAGATGCTGATCCAGAGAAGGTAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS CCA 72 bp | TGCAATCTTTGGAGTATCAGGAGTTATTACCTTCTCTaGATCAGCATCTTTCTTATCAGTTGCAGGAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: CNLWSIRSYYLL*ISIFLISCRRN Trigger: GTTCCTCCTGCAACTGATAAGAAAGATGCTGATCCAGAGAAGGTAATAACTCCTGATACTCCAAAGATTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS CCA 72 bp | CTATTAAATTTCTTCTTAGAGGGTTCAGTAACTGGCTaGCCTAGCTTAGATGTCCCCATCTCAGAATTCACT | + |
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Preference number: 6 (lower is better) Translates to: LLNFFLEGSVTG*PSLDVPISEFT Trigger: AGTGAATTCTGAGATGGGGACATCTAAGCTAGGCCAGCCAGTTACTGAACCCTCTAAGAAGAAATTTAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS CAA 72 bp | TTATTACCTTCTCTGGATCAGCATCTTTCTTATCAGTaGCAGGAGGAACAATGCCCGGTTCTTCATCCAATT | + |
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Preference number: 6 (lower is better) Translates to: LLPSLDQHLSYQ*QEEQCPVLHPI Trigger: AATTGGATGAAGAACCGGGCATTGTTCCTCCTGCAACTGATAAGAAAGATGCTGATCCAGAGAAGGTAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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| CDS CAA 72 bp | CAGAATTCACTTCCTCTTCTAAAGAAGATGCAATCTTaGGAGTATCAGGAGTTATTACCTTCTCTGGATCAG | + |
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Preference number: 6 (lower is better) Translates to: QNSLPLLKKMQS*EYQELLPSLDQ Trigger: CTGATCCAGAGAAGGTAATAACTCCTGATACTCCAAAGATTGCATCTTCTTTAGAAGAGGAAGTGAATTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035852.14 |
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