Pregenerated sensors for ZCCHC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029179Ensembl transcript IDs: ENSMUST00000031077.13, ENSMUST00000113904.9
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGGCGTTAAAGGGTGGAAAAGCGTGGAGAGAGAGCCAGGCAACCTaGTGCCTACAGAAGGCTCCCCGGTCTGCAGAGGCAGCTGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: EALKGGKAWRESQAT*CLQKAPRSAEAAEG Trigger: CCCTTCAGCTGCCTCTGCAGACCGGGGAGCCTTCTGTAGGCAGCAGGTTGCCTGGCTCTCTCTCCACGCTTTTCCACCCTTTAACGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
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| 3UTR TCA 90 bp | AGAGGTGCCCACTCGCCCCCACTCCCCAATCCTGGCTGTCCTGTGTaGAAGCTGTCAAGGCAGGACTCCCTGATGCACACACTCTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: RGAHSPPLPNPGCPV*KLSRQDSLMHTLSA Trigger: AGCAGAGAGTGTGTGCATCAGGGAGTCCTGCCTTGACAGCTTTCACACAGGACAGCCAGGATTGGGGAGTGGGGGCGAGTGGGCACCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR TCA 90 bp | GGCAACCTGCTGCCTACAGAAGGCTCCCCGGTCTGCAGAGGCAGCTaGAGGGACATAGCCAGCAAATGCCACCTGCCCATTACCAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: GNLLPTEGSPVCRGS*RDIASKCHLPITRL Trigger: AAGCCTGGTAATGGGCAGGTGGCATTTGCTGGCTATGTCCCTTCAGCTGCCTCTGCAGACCGGGGAGCCTTCTGTAGGCAGCAGGTTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
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| 3UTR GCA 90 bp | GCGTTAAAGGGTGGAAAAGCGTGGAGAGAGAGCCAGGCAACCTGCTaGCTACAGAAGGCTCCCCGGTCTGCAGAGGCAGCTGAAGGGACA | + |
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Preference number: 1 (lower is better) Translates to: ALKGGKAWRESQATC*LQKAPRSAEAAEGT Trigger: TGTCCCTTCAGCTGCCTCTGCAGACCGGGGAGCCTTCTGTAGGCAGCAGGTTGCCTGGCTCTCTCTCCACGCTTTTCCACCCTTTAACGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
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| 3UTR GCA 90 bp | TGTGAGCTCCTCAGACATCAGGCACTCAGGATGCCCAGACATCCATaGAGGCAGGTCACCCACACACAGTTAAAGGGGGCTGCTGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: CELLRHQALRMPRHP*RQVTHTQLKGAAGL Trigger: CAGCCCAGCAGCCCCCTTTAACTGTGTGTGGGTGACCTGCCTGCATGGATGTCTGGGCATCCTGAGTGCCTGATGTCTGAGGAGCTCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR TCA 90 bp | CGGGTTGATCTTCCAGAGGACCCAGGTTCACTGCCAGCACCTTCATaGAAGCTCGAAACTGTCTGTAGCTCCAGTTCCAGGGGATCCGAT | + |
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Preference number: 1 (lower is better) Translates to: RVDLPEDPGSLPAPS*KLETVCSSSSRGSD Trigger: ATCGGATCCCCTGGAACTGGAGCTACAGACAGTTTCGAGCTTTCATGAAGGTGCTGGCAGTGAACCTGGGTCCTCTGGAAGATCAACCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR GCA 90 bp | AGTGGTTTAGAGGCCGGGTTGATCTTCCAGAGGACCCAGGTTCACTaGCAGCACCTTCATGAAAGCTCGAAACTGTCTGTAGCTCCAGTT | + |
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Preference number: 1 (lower is better) Translates to: SGLEAGLIFQRTQVH*QHLHESSKLSVAPV Trigger: AACTGGAGCTACAGACAGTTTCGAGCTTTCATGAAGGTGCTGGCAGTGAACCTGGGTCCTCTGGAAGATCAACCCGGCCTCTAAACCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR TCA 90 bp | CCTCACTTCTTGATCCTCCAGGAAGACACCTGGGAAAGGCCACGGTaGACAGCAGACTCTTTCTGTTCCTTTAGCATAGGTTGTATTGGG | + |
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Preference number: 1 (lower is better) Translates to: PHFLILQEDTWERPR*TADSFCSFSIGCIG Trigger: CCCAATACAACCTATGCTAAAGGAACAGAAAGAGTCTGCTGTTCACCGTGGCCTTTCCCAGGTGTCTTCCTGGAGGATCAAGAAGTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR CCA 90 bp | CTTATTGAGAGAGCCTATAGTCCATTAGTAAACACCACTCCAGTGTaGCAGCACAGGCCTGTGAGCCCAGCGTGTGGGGAAACTCAATTT | + |
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Preference number: 1 (lower is better) Translates to: LIERAYSPLVNTTPV*QHRPVSPACGETQF Trigger: AAATTGAGTTTCCCCACACGCTGGGCTCACAGGCCTGTGCTGCCACACTGGAGTGGTGTTTACTAATGGACTATAGGCTCTCTCAATAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR GCA 90 bp | CCGCCTCATCTGATAATAACTACCCAACTAGTAAAACGGCAGCCCTaGAGGACCATCCATGAACACCAGTTAGTTGAAGTTTTACTTGGC | + |
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Preference number: 1 (lower is better) Translates to: PPHLIITTQLVKRQP*RTIHEHQLVEVLLG Trigger: GCCAAGTAAAACTTCAACTAACTGGTGTTCATGGATGGTCCTGCAGGGCTGCCGTTTTACTAGTTGGGTAGTTATTATCAGATGAGGCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR CCA 90 bp | TGGCATCAAAGGTTGGACTATAAATCTTGCTTATTCTCAAGTCACTaGACATTTAGGAGTGAGGATATTGATGGCCCCTTCCCTCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: WHQRLDYKSCLFSSH*TFRSEDIDGPFPPL Trigger: AAGAGGAGGGAAGGGGCCATCAATATCCTCACTCCTAAATGTCCAGTGACTTGAGAATAAGCAAGATTTATAGTCCAACCTTTGATGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
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| 3UTR GCA 90 bp | TGTGGCACGCGGAGAAAATGGCATCAAAGGTTGGACTATAAATCTTaGTTATTCTCAAGTCACTGGACATTTAGGAGTGAGGATATTGAT | + |
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Preference number: 1 (lower is better) Translates to: CGTRRKWHQRLDYKS*LFSSHWTFRSEDID Trigger: ATCAATATCCTCACTCCTAAATGTCCAGTGACTTGAGAATAAGCAAGATTTATAGTCCAACCTTTGATGCCATTTTCTCCGCGTGCCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
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| 3UTR CCA 90 bp | CTAACTAGTACTAACATAAATAAGGTGTACTTCAAATCTTATGGCTaGTTCGCTCAGCTCATTTTAATTTGGCTCAGAGTTCTAGGGGCA | + |
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Preference number: 1 (lower is better) Translates to: LTSTNINKVYFKSYG*FAQLILIWLRVLGA Trigger: TGCCCCTAGAACTCTGAGCCAAATTAAAATGAGCTGAGCGAACCAGCCATAAGATTTGAAGTACACCTTATTTATGTTAGTACTAGTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR-3UTR CCA 90 bp | GCAACCTGCCACGGCGGACAGAACAGATCCTCTGCTCTGCTGCTCTCACCACCAAACACCACTCCAGTGTaGCAGCACAGGCCTGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: ATCHGGQNRSSALLLSPPNTTPV*QHRPVS Trigger: GCTCACAGGCCTGTGCTGCCACACTGGAGTGGTGTT...TGGTGGTGAGAGCAGCAGAGCAGAGGATCTGTTCTGTCCGCCGTGGCAGGTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR-3UTR GCA 90 bp | GCAACCTGCCACGGCGGACAGAACAGATCCTCTGCTCTGCTGCTCTCACCACCACTGGAAGTCAGTCTCTaGTCCCCACCCCTGAAACAG | + |
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Preference number: 2 (lower is better) Translates to: ATCHGGQNRSSALLLSPPLEVSL*SPPLKQ Trigger: CTGTTTCAGGGGTGGGGAGCAGAGACTGACTTCCAG...TGGTGGTGAGAGCAGCAGAGCAGAGGATCTGTTCTGTCCGCCGTGGCAGGTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR-3UTR GCA 90 bp | GACCAGGCTGACCTCAAACTCAGAAATCGACCTGCCTCTTCCACCCAAGTGCTGAGCCAGGCAACCTGCTaGCTACAGAAGGCTCCCCGG | + |
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Preference number: 2 (lower is better) Translates to: DQADLKLRNRPASSTQVLSQATC*LQKAPR Trigger: CCGGGGAGCCTTCTGTAGGCAGCAGGTTGCCTGGCT...CAGCACTTGGGTGGAAGAGGCAGGTCGATTTCTGAGTTTGAGGTCAGCCTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
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| 3UTR-3UTR GCA 90 bp | TTCAGGGCTGGAGAGGTTGATGCTCTTGCAGAGAGCCTGGGCCTGATTCCCAGCATGCCCAGACATCCATaGAGGCAGGTCACCCACACA | + |
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Preference number: 2 (lower is better) Translates to: FRAGEVDALAESLGLIPSMPRHP*RQVTHT Trigger: TGTGTGGGTGACCTGCCTGCATGGATGTCTGGGCAT...GCTGGGAATCAGGCCCAGGCTCTCTGCAAGAGCATCAACCTCTCCAGCCCTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR-3UTR CCA 90 bp | GCACCTCAAGGGATGCCTGACTTCTGTGTCCCAAGCTTCCTGAAAGCAAGCTGTTTCCAGGGCATCTTCTaGCCTCTGCAGACATCAGGC | + |
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Preference number: 2 (lower is better) Translates to: APQGMPDFCVPSFLKASCFQGIF*PLQTSG Trigger: GCCTGATGTCTGCAGAGGCCAGAAGATGCCCTGGAA...ACAGCTTGCTTTCAGGAAGCTTGGGACACAGAAGTCAGGCATCCCTTGAGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR-3UTR CCA 90 bp | GCACCTCAAGGGATGCCTGACTTCTGTGTCCCAAGCTTCCTGAAAGCAAGCTGTTATCGAGGACTGTGCTaGTGCACACACTGTGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: APQGMPDFCVPSFLKASCYRGLC*CTHCAP Trigger: AGGGGCACAGTGTGTGCACCAGCACAGTCCTCGATA...ACAGCTTGCTTTCAGGAAGCTTGGGACACAGAAGTCAGGCATCCCTTGAGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR-3UTR TCA 90 bp | CACCCCAATGGGCTTGTCTCTTTGCTACATTTATACTGCTCAACTCAGCACTTCCAGAGAGCCTGGGCCTaGTTCCCAGCACCCATGTGG | + |
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Preference number: 2 (lower is better) Translates to: HPNGLVSLLHLYCSTQHFQRAWA*FPAPMW Trigger: CCACATGGGTGCTGGGAATCAGGCCCAGGCTCTCTG...GAAGTGCTGAGTTGAGCAGTATAAATGTAGCAAAGAGACAAGCCCATTGGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR CAA 90 bp | GCAAATGCCACCTGCCCATTACCAGGCTTAGGAAGGGGCACACCTTaGAAAGCAGCTGGATTTAAGTCCATGTGGCACGCGGAGAAAATG | + |
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Preference number: 2 (lower is better) Translates to: ANATCPLPGLGRGTP*KAAGFKSMWHAEKM Trigger: CATTTTCTCCGCGTGCCACATGGACTTAAATCCAGCTGCTTTCAAAGGTGTGCCCCTTCCTAAGCCTGGTAATGGGCAGGTGGCATTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
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| 3UTR-3UTR GCA 90 bp | TTCAGGGCTGGAGAGGTTGATGCTCTTGCAGAGAGCCTGGGCCTGATTCCCAGCGAATTTCTGCTTTGCTaGTATAAAACGGCATGCTCC | + |
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Preference number: 2 (lower is better) Translates to: FRAGEVDALAESLGLIPSEFLLC*YKTACS Trigger: GGAGCATGCCGTTTTATAGCAGCAAAGCAGAAATTC...GCTGGGAATCAGGCCCAGGCTCTCTGCAAGAGCATCAACCTCTCCAGCCCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR-3UTR CCA 90 bp | TCACTTCTCCACACTAGCAGAACCATGCCACTTGCCCTATCGAGGACTGTGCTGGATTCAATTTTCAGCTaGGCGTGGTGGTGCACGCTT | + |
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Preference number: 2 (lower is better) Translates to: SLLHTSRTMPLALSRTVLDSIFS*AWWCTL Trigger: AAGCGTGCACCACCACGCCCAGCTGAAAATTGAATC...CAGCACAGTCCTCGATAGGGCAAGTGGCATGGTTCTGCTAGTGTGGAGAAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR-3UTR GCA 90 bp | TGTGACGCTTCCAGTTATAAGGCAACAAATTCAGCCCTTTTCTGCTTTGGAATTCTCTGCTTGCCGTGGTaGCCGCCCTGCAATCCTCGG | + |
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Preference number: 2 (lower is better) Translates to: CDASSYKATNSALFCFGILCLPW*PPCNPR Trigger: CCGAGGATTGCAGGGCGGGCACCACGGCAAGCAGAG...AATTCCAAAGCAGAAAAGGGCTGAATTTGTTGCCTTATAACTGGAAGCGTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR-3UTR GCA 90 bp | GAGGCCAAAATAAACACTGGTGAGGCGTTAAAGGGTGGAAAAGCGTGGAGAGAGCCAGCAAATGCCACCTaGCCATTACCAGGCTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: EAKINTGEALKGGKAWREPANAT*PLPGLG Trigger: TCCTAAGCCTGGTAATGGGCAGGTGGCATTTGCTGG...CTCTCTCCACGCTTTTCCACCCTTTAACGCCTCACCAGTGTTTATTTTGGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
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| 3UTR-3UTR CCA 90 bp | TCACTTCTCCACACTAGCAGAACCATGCCACTTGCCCTATCGAGGACTGTGCTGCTAGAGAGATGTCAGTaGTTTAGAGGCCGGGTTGAT | + |
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Preference number: 2 (lower is better) Translates to: SLLHTSRTMPLALSRTVLLERCQ*FRGRVD Trigger: ATCAACCCGGCCTCTAAACCACTGACATCTCTCTAG...CAGCACAGTCCTCGATAGGGCAAGTGGCATGGTTCTGCTAGTGTGGAGAAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCCACCCCAATGGGCTTGTCTCTTTGCTACATTTATACTGCTCAACTCAGGGAGGCAGAAGCAGGTaGATTTCTGAGTTCGAGACC | + |
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Preference number: 2 (lower is better) Translates to: SSHPNGLVSLLHLYCSTQGGRSR*ISEFET Trigger: GGTCTCGAACTCAGAAATCCACCTGCTTCTGCCTCC...CTGAGTTGAGCAGTATAAATGTAGCAAAGAGACAAGCCCATTGGGGTGGCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR-3UTR TCA 90 bp | AGCAGCCACCCCAATGGGCTTGTCTCTTTGCTACATTTATACTGCTCAACTCAGAGCTGGCAAAGGCTCTaGCTACCAAGCAGCATTAGT | + |
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Preference number: 2 (lower is better) Translates to: SSHPNGLVSLLHLYCSTQSWQRL*LPSSIS Trigger: ACTAATGCTGCTTGGTAGTCAGAGCCTTTGCCAGCT...CTGAGTTGAGCAGTATAAATGTAGCAAAGAGACAAGCCCATTGGGGTGGCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR-3UTR GCA 90 bp | AGCAGCCACCCCAATGGGCTTGTCTCTTTGCTACATTTATACTGCTCAACTCAGACAGATCCTCTGCTCTaGTGCTCTCACCACCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: SSHPNGLVSLLHLYCSTQTDPLL*CSHHQD Trigger: ATCTTGGTGGTGAGAGCAGCAGAGCAGAGGATCTGT...CTGAGTTGAGCAGTATAAATGTAGCAAAGAGACAAGCCCATTGGGGTGGCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR-3UTR CCA 90 bp | GCACCTCAAGGGATGCCTGACTTCTGTGTCCCAAGCTTCCTGAAAGCAAGCTGTCAGCTCATTTTAATTTaGCTCAGAGTTCTAGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: APQGMPDFCVPSFLKASCQLILI*LRVLGA Trigger: TGCCCCTAGAACTCTGAGCCAAATTAAAATGAGCTG...ACAGCTTGCTTTCAGGAAGCTTGGGACACAGAAGTCAGGCATCCCTTGAGGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR-3UTR TCA 90 bp | GCACCATTCCAGTTCACATCTGAGGGAAAAATTAACCATGGAAAAACAAACTACCCTGGCTGTCCTGTGTaGAAGCTGTCAAGGCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: APFQFTSEGKINHGKTNYPGCPV*KLSRQD Trigger: GTCCTGCCTTGACAGCTTTCACACAGGACAGCCAGG...GTAGTTTGTTTTTCCATGGTTAATTTTTCCCTCAGATGTGAACTGGAATGGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR-3UTR CCA 90 bp | TTTAAGAAAGGGATTAATACATGCGGCAGTCAGCAGGGGCAGAGAAATGAAACTTTCAGCTGGGCGTGGTaGTGCACGCTTTTAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: FKKGINTCGSQQGQRNETFSWAW*CTLLIP Trigger: TGGGATTAAAAGCGTGCACCACCACGCCCAGCTGAA...AGTTTCATTTCTCTGCCCCTGCTGACTGCCGCATGTATTAATCCCTTTCTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR-3UTR TCA 90 bp | CAGCACCATTCCAGTTCACATCTGAGGGAAAAATTAACCATGGAAAAACAAACTTCCGATAGCCCTTTGTaGGCTCCTCAGACATCAGGC | + |
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Preference number: 2 (lower is better) Translates to: QHHSSSHLREKLTMEKQTSDSPL*APQTSG Trigger: GCCTGATGTCTGAGGAGCTCACAAAGGGCTATCGGA...AGTTTGTTTTTCCATGGTTAATTTTTCCCTCAGATGTGAACTGGAATGGTGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR-3UTR GCA 90 bp | CAGCACCATTCCAGTTCACATCTGAGGGAAAAATTAACCATGGAAAAACAAACTGCATCTTCTGGCCTCTaGAGACATCAGGCAGGGACA | + |
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Preference number: 2 (lower is better) Translates to: QHHSSSHLREKLTMEKQTASSGL*RHQAGT Trigger: TGTCCCTGCCTGATGTCTGCAGAGGCCAGAAGATGC...AGTTTGTTTTTCCATGGTTAATTTTTCCCTCAGATGTGAACTGGAATGGTGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR-3UTR CCA 90 bp | CAGCACCATTCCAGTTCACATCTGAGGGAAAAATTAACCATGGAAAAACAAACTCCCACTCCCCAATCCTaGCTGTCCTGTGTGAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: QHHSSSHLREKLTMEKQTPTPQS*LSCVKA Trigger: AGCTTTCACACAGGACAGCCAGGATTGGGGAGTGGG...AGTTTGTTTTTCCATGGTTAATTTTTCCCTCAGATGTGAACTGGAATGGTGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR-3UTR TCA 90 bp | ATAGCTCAAGAGCTGGTCCTTAATGGAAAATGTCCTACTGGATTTAAACAAACACAAGGCAGGACTCCCTaGTGCACACACTCTCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: IAQELVLNGKCPTGFKQTQGRTP*CTHSLL Trigger: AAGCAGAGAGTGTGTGCATCAGGGAGTCCTGCCTTG...TGTTTGTTTAAATCCAGTAGGACATTTTCCATTAAGGACCAGCTCTTGAGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR-3UTR GCA 90 bp | AGCAGCCACCCCAATGGGCTTGTCTCTTTGCTACATTTATACTGCTCAACTCAGTTGGAATTTCTGCTTTaGTGCTATAAAACGGCATGC | + |
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Preference number: 2 (lower is better) Translates to: SSHPNGLVSLLHLYCSTQLEFLL*CYKTAC Trigger: GCATGCCGTTTTATAGCAGCAAAGCAGAAATTCCAA...CTGAGTTGAGCAGTATAAATGTAGCAAAGAGACAAGCCCATTGGGGTGGCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR-3UTR TCA 90 bp | TCAAGGTCTGTGAGAACAAGTCATGACCAAAATCTCACAAAAAGCCTCACAATGGAAGGGGCACACCTTTaGAAGCAGCTGGATTTAAGT | + |
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Preference number: 2 (lower is better) Translates to: SRSVRTSHDQNLTKSLTMEGAHL*KQLDLS Trigger: ACTTAAATCCAGCTGCTTTCAAAGGTGTGCCCCTTC...CATTGTGAGGCTTTTTGTGAGATTTTGGTCATGACTTGTTCTCACAGACCTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
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| 3UTR-3UTR GCA 90 bp | GAGGCCAAAATAAACACTGGTGAGGCGTTAAAGGGTGGAAAAGCGTGGAGAGAGTTGGACTATAAATCTTaGTTATTCTCAAGTCACTGG | + |
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Preference number: 2 (lower is better) Translates to: EAKINTGEALKGGKAWRELDYKS*LFSSHW Trigger: CCAGTGACTTGAGAATAAGCAAGATTTATAGTCCAA...CTCTCTCCACGCTTTTCCACCCTTTAACGCCTCACCAGTGTTTATTTTGGCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
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| 3UTR CAA 90 bp | CTGGATTTAAGTCCATGTGGCACGCGGAGAAAATGGCATCAAAGGTaGGACTATAAATCTTGCTTATTCTCAAGTCACTGGACATTTAGG | + |
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Preference number: 2 (lower is better) Translates to: LDLSPCGTRRKWHQR*DYKSCLFSSHWTFR Trigger: CCTAAATGTCCAGTGACTTGAGAATAAGCAAGATTTATAGTCCAACCTTTGATGCCATTTTCTCCGCGTGCCACATGGACTTAAATCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
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| 3UTR-3UTR TCA 90 bp | CAGCACCATTCCAGTTCACATCTGAGGGAAAAATTAACCATGGAAAAACAAACTTACCATCATAGCAGCTaGAGCTTCAAAAACCTCTCG | + |
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Preference number: 2 (lower is better) Translates to: QHHSSSHLREKLTMEKQTYHHSS*SFKNLS Trigger: CGAGAGGTTTTTGAAGCTTCAGCTGCTATGATGGTA...AGTTTGTTTTTCCATGGTTAATTTTTCCCTCAGATGTGAACTGGAATGGTGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR-3UTR TCA 90 bp | AGGTCTGTGAGAACAAGTCATGACCAAAATCTCACAAAAAGCCTCACAATGTATGTTTCATACCTAAAGTaGAACAAAAGCTCAACGCAC | + |
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Preference number: 2 (lower is better) Translates to: RSVRTSHDQNLTKSLTMYVSYLK*NKSSTH Trigger: GTGCGTTGAGCTTTTGTTTCACTTTAGGTATGAAAC...ATACATTGTGAGGCTTTTTGTGAGATTTTGGTCATGACTTGTTCTCACAGACCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCACCATTCCAGTTCACATCTGAGGGAAAAATTAACCATGGAAAAACAAACTCTGCTTTGGAATTTCTaGTTTGCTGCTATAAAACGG | + |
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Preference number: 2 (lower is better) Translates to: QHHSSSHLREKLTMEKQTLLWNF*FAAIKR Trigger: CCGTTTTATAGCAGCAAAGCAGAAATTCCAAAGCAG...AGTTTGTTTTTCCATGGTTAATTTTTCCCTCAGATGTGAACTGGAATGGTGCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR-3UTR GCA 90 bp | CAAGAGCTGGTCCTTAATGGAAAATGTCCTACTGGATTTAAACAAACAGATAAAAATTCAGCCCTTTTCTaGTTTGGAATTTCTGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: QELVLNGKCPTGFKQTDKNSALF*FGISAL Trigger: CAAAGCAGAAATTCCAAAGCAGAAAAGGGCTGAATT...TTTATCTGTTTGTTTAAATCCAGTAGGACATTTTCCATTAAGGACCAGCTCTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR GCA 72 bp | CCTGCCACGGCGGACAGAACAGATCCTCTGCTCTGCTaGTCTCACCACCAAGATGCTGCTGCCCGTGATGGC | + |
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Preference number: 3 (lower is better) Translates to: PATADRTDPLLC*SHHQDAAARDG Trigger: GCCATCACGGGCAGCAGCATCTTGGTGGTGAGAGCAGCAGAGCAGAGGATCTGTTCTGTCCGCCGTGGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
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| 3UTR GCA 72 bp | AGGAACAGGCTGGAACAGTCAGGCCCCGCTGCAACCTaGCACGGCGGACAGAACAGATCCTCTGCTCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RNRLEQSGPAAT*HGGQNRSSALL Trigger: CAGCAGAGCAGAGGATCTGTTCTGTCCGCCGTGGCAGGTTGCAGCGGGGCCTGACTGTTCCAGCCTGTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR GCA 72 bp | GGTGGAAAAGCGTGGAGAGAGAGCCAGGCAACCTGCTaGCTACAGAAGGCTCCCCGGTCTGCAGAGGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GGKAWRESQATC*LQKAPRSAEAA Trigger: AGCTGCCTCTGCAGACCGGGGAGCCTTCTGTAGGCAGCAGGTTGCCTGGCTCTCTCTCCACGCTTTTCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| 3UTR GCA 72 bp | GCTGTCAAGGCAGGACTCCCTGATGCACACACTCTCTaGTTGCCGTGGTGCCCGCCCTGCAATCCTCGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: AVKAGLPDAHTL*LPWCPPCNPRK Trigger: TTTCCGAGGATTGCAGGGCGGGCACCACGGCAAGCAGAGAGTGTGTGCATCAGGGAGTCCTGCCTTGACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR GCA 72 bp | AAGGGTGGAAAAGCGTGGAGAGAGAGCCAGGCAACCTaGTGCCTACAGAAGGCTCCCCGGTCTGCAGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: KGGKAWRESQAT*CLQKAPRSAEA Trigger: TGCCTCTGCAGACCGGGGAGCCTTCTGTAGGCAGCAGGTTGCCTGGCTCTCTCTCCACGCTTTTCCACCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| 3UTR TCA 72 bp | CTGCCTACAGAAGGCTCCCCGGTCTGCAGAGGCAGCTaGAGGGACATAGCCAGCAAATGCCACCTGCCCATT | + |
|
Preference number: 3 (lower is better) Translates to: LPTEGSPVCRGS*RDIASKCHLPI Trigger: AATGGGCAGGTGGCATTTGCTGGCTATGTCCCTTCAGCTGCCTCTGCAGACCGGGGAGCCTTCTGTAGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| 3UTR GCA 72 bp | CTAGCAGAACCATGCCACTTGCCCTATCGAGGACTGTaGTGGTGCACACACTGTGCCCCTGGGCATAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LAEPCHLPYRGL*WCTHCAPGHSW Trigger: CCAGCTATGCCCAGGGGCACAGTGTGTGCACCAGCACAGTCCTCGATAGGGCAAGTGGCATGGTTCTGCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR GCA 72 bp | GTTCTAAAGGAACAGGCTGGAACAGTCAGGCCCCGCTaGAACCTGCCACGGCGGACAGAACAGATCCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: VLKEQAGTVRPR*NLPRRTEQILC Trigger: GCAGAGGATCTGTTCTGTCCGCCGTGGCAGGTTGCAGCGGGGCCTGACTGTTCCAGCCTGTTCCTTTAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR GCA 72 bp | CCCTTTGTGAGCTCCTCAGACATCAGGCACTCAGGATaGCCAGACATCCATGCAGGCAGGTCACCCACACAC | + |
|
Preference number: 3 (lower is better) Translates to: PFVSSSDIRHSG*PDIHAGRSPTH Trigger: GTGTGTGGGTGACCTGCCTGCATGGATGTCTGGGCATCCTGAGTGCCTGATGTCTGAGGAGCTCACAAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR GCA 72 bp | GCTAACCAGGAACTCTGCCCACCACTGCTTCCCCGGTaGTGGGATTTAAGGCAGGCACCACAACACCAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ANQELCPPLLPR*WDLRQAPQHQA Trigger: AGCTTGGTGTTGTGGTGCCTGCCTTAAATCCCAGCACCGGGGAAGCAGTGGTGGGCAGAGTTCCTGGTTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR GCA 72 bp | CTCAGACATCAGGCACTCAGGATGCCCAGACATCCATaGAGGCAGGTCACCCACACACAGTTAAAGGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LRHQALRMPRHP*RQVTHTQLKGA Trigger: AGCCCCCTTTAACTGTGTGTGGGTGACCTGCCTGCATGGATGTCTGGGCATCCTGAGTGCCTGATGTCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR GCA 72 bp | CTGGGATTAAAGGCGTGCGCCACCACTGGCCGGCTGTaGCCAACTTTTGACACTGCAACACGACATCATCTA | + |
|
Preference number: 3 (lower is better) Translates to: LGLKACATTGRL*PTFDTATRHHL Trigger: TAGATGATGTCGTGTTGCAGTGTCAAAAGTTGGGCACAGCCGGCCAGTGGTGGCGCACGCCTTTAATCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| 3UTR CCA 72 bp | AGAGCCTATAGTCCATTAGTAAACACCACTCCAGTGTaGCAGCACAGGCCTGTGAGCCCAGCGTGTGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RAYSPLVNTTPV*QHRPVSPACGE Trigger: TTCCCCACACGCTGGGCTCACAGGCCTGTGCTGCCACACTGGAGTGGTGTTTACTAATGGACTATAGGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR TCA 72 bp | CTTCCAGAGGACCCAGGTTCACTGCCAGCACCTTCATaGAAGCTCGAAACTGTCTGTAGCTCCAGTTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LPEDPGSLPAPS*KLETVCSSSSR Trigger: CCTGGAACTGGAGCTACAGACAGTTTCGAGCTTTCATGAAGGTGCTGGCAGTGAACCTGGGTCCTCTGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR GCA 72 bp | GAGGCCGGGTTGATCTTCCAGAGGACCCAGGTTCACTaGCAGCACCTTCATGAAAGCTCGAAACTGTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: EAGLIFQRTQVH*QHLHESSKLSV Trigger: TACAGACAGTTTCGAGCTTTCATGAAGGTGCTGGCAGTGAACCTGGGTCCTCTGGAAGATCAACCCGGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR TCA 72 bp | GGTGTAAAAGTGCCAGCTAGCACCTCAAGGGATGCCTaGCTTCTGTGTCCCAAGCTTCCTGAAAGCAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GVKVPASTSRDA*LLCPKLPESKL Trigger: CAGCTTGCTTTCAGGAAGCTTGGGACACAGAAGTCAGGCATCCCTTGAGGTGCTAGCTGGCACTTTTACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR CCA 72 bp | GGACAGACACGCCACACGAGTGAGCAGCCACCCCAATaGGCTTGTCTCTTTGCTACATTTATACTGCTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: GQTRHTSEQPPQ*ACLFATFILLN Trigger: GTTGAGCAGTATAAATGTAGCAAAGAGACAAGCCCATTGGGGTGGCTGCTCACTCGTGTGGCGTGTCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR CCA 72 bp | ATAAACACTGGTGAGGCGTTAAAGGGTGGAAAAGCGTaGAGAGAGAGCCAGGCAACCTGCTGCCTACAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: INTGEALKGGKA*RESQATCCLQK Trigger: CTTCTGTAGGCAGCAGGTTGCCTGGCTCTCTCTCCACGCTTTTCCACCCTTTAACGCCTCACCAGTGTTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| 3UTR-3UTR CAA 90 bp | CACCCCAATGGGCTTGTCTCTTTGCTACATTTATACTGCTCAACTCAGCACTTCCTAGGCCCTCACTTCTaGATCCTCCAGGAAGACACC | + |
|
Preference number: 3 (lower is better) Translates to: HPNGLVSLLHLYCSTQHFLGPHF*ILQEDT Trigger: GGTGTCTTCCTGGAGGATCAAGAAGTGAGGGCCTAG...GAAGTGCTGAGTTGAGCAGTATAAATGTAGCAAAGAGACAAGCCCATTGGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR TCA 72 bp | TTGATCCTCCAGGAAGACACCTGGGAAAGGCCACGGTaGACAGCAGACTCTTTCTGTTCCTTTAGCATAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LILQEDTWERPR*TADSFCSFSIG Trigger: ACCTATGCTAAAGGAACAGAAAGAGTCTGCTGTTCACCGTGGCCTTTCCCAGGTGTCTTCCTGGAGGATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR-3UTR CAA 90 bp | TTTAAGAAAGGGATTAATACATGCGGCAGTCAGCAGGGGCAGAGAAATGAAACTGGTTTAGAGGCCGGGTaGATCTTCCAGAGGACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: FKKGINTCGSQQGQRNETGLEAG*IFQRTQ Trigger: CTGGGTCCTCTGGAAGATCAACCCGGCCTCTAAACC...AGTTTCATTTCTCTGCCCCTGCTGACTGCCGCATGTATTAATCCCTTTCTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR-3UTR CAA 90 bp | AAAGAGGCCAAAATAAACACTGGTGAGGCGTTAAAGGGTGGAAAAGCGTGGAGATTAGGAGTGAGGATATaGATGGCCCCTTCCCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: KEAKINTGEALKGGKAWRLGVRI*MAPSLL Trigger: GAGGAGGGAAGGGGCCATCAATATCCTCACTCCTAA...TCTCCACGCTTTTCCACCCTTTAACGCCTCACCAGTGTTTATTTTGGCCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| 3UTR-3UTR CAA 90 bp | TCACTTCTCCACACTAGCAGAACCATGCCACTTGCCCTATCGAGGACTGTGCTGGTCACTTTATATTGTTaGTGTGTTACAGAAACCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SLLHTSRTMPLALSRTVLVTLYC*CVTETS Trigger: GGAGGTTTCTGTAACACACAAACAATATAAAGTGAC...CAGCACAGTCCTCGATAGGGCAAGTGGCATGGTTCTGCTAGTGTGGAGAAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR GCA 72 bp | CAATATGAAGATTCAATTTTCAGCTGGGCGTGGTGGTaGACGCTTTTAATCCCAGCATTTGGGAGGCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: QYEDSIFSWAWW*TLLIPAFGRQK Trigger: CTTCTGCCTCCCAAATGCTGGGATTAAAAGCGTGCACCACCACGCCCAGCTGAAAATTGAATCTTCATATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR-3UTR CAA 90 bp | CTAACCATGACAACAAGGAAAGAGATGGGCCTGATCACACAAAAGACATTTCCGGGCTGTGTTTTGTTATaGGAGGCTTCTAAGGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LTMTTRKEMGLITQKTFPGCVLL*EASKGK Trigger: TTTCCCCTTAGAAGCCTCCAATAACAAAACACAGCC...CGGAAATGTCTTTTGTGTGATCAGGCCCATCTCTTTCCTTGTTGTCATGGTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR TCA 72 bp | CAGAGAAATGAAACTGCACAACAAGTAAAGGAAAACTaGCCACATTGCAGAGGCCCTTTCCTAAAGCCTCGA | + |
|
Preference number: 3 (lower is better) Translates to: QRNETAQQVKEN*PHCRGPFLKPR Trigger: TCGAGGCTTTAGGAAAGGGCCTCTGCAATGTGGTCAGTTTTCCTTTACTTGTTGTGCAGTTTCATTTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR GCA 72 bp | CTGATAATAACTACCCAACTAGTAAAACGGCAGCCCTaGAGGACCATCCATGAACACCAGTTAGTTGAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LIITTQLVKRQP*RTIHEHQLVEV Trigger: AACTTCAACTAACTGGTGTTCATGGATGGTCCTGCAGGGCTGCCGTTTTACTAGTTGGGTAGTTATTATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR TCA 72 bp | GGGTTTGTTTGTTTGTTTGTTTTAGAGAGGAGTAACTaGGAAAAGGAGAGTCCTCTGGCTGAAGAAGGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: GFVCLFVLERSN*EKESPLAEEGN Trigger: GTTGCCTTCTTCAGCCAGAGGACTCTCCTTTTCTCAGTTACTCCTCTCTAAAACAAACAAACAAACAAACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR TCA 72 bp | GGCCGATGGGCTATGGACCAGATGTGCTTTAATGTATaGCTTGGTCATTTAACAAGAGTTTCATACCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GRWAMDQMCFNV*LGHLTRVSYLK Trigger: CTTTAGGTATGAAACTCTTGTTAAATGACCAAGTCATACATTAAAGCACATCTGGTCCATAGCCCATCGGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| 3UTR TCA 72 bp | CACGACATCATCTACAATGTTCCTACTCAAGGTCTGTaGGAACAAGTCATGACCAAAATCTCACAAAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: HDIIYNVPTQGL*EQVMTKISQKA Trigger: GGCTTTTTGTGAGATTTTGGTCATGACTTGTTCTCACAGACCTTGAGTAGGAACATTGTAGATGATGTCGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| 3UTR CCA 72 bp | AGGTTGGACTATAAATCTTGCTTATTCTCAAGTCACTaGACATTTAGGAGTGAGGATATTGATGGCCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RLDYKSCLFSSH*TFRSEDIDGPF Trigger: GAAGGGGCCATCAATATCCTCACTCCTAAATGTCCAGTGACTTGAGAATAAGCAAGATTTATAGTCCAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| 3UTR-3UTR CAA 90 bp | CAAGAGCTGGTCCTTAATGGAAAATGTCCTACTGGATTTAAACAAACAGATAAACAGCCCTTTTCTGCTTaGGAATTTCTGCTTTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QELVLNGKCPTGFKQTDKQPFSA*EFLLCC Trigger: GCAGCAAAGCAGAAATTCCAAAGCAGAAAAGGGCTG...TTTATCTGTTTGTTTAAATCCAGTAGGACATTTTCCATTAAGGACCAGCTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR GCA 72 bp | CGGAGAAAATGGCATCAAAGGTTGGACTATAAATCTTaGTTATTCTCAAGTCACTGGACATTTAGGAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RRKWHQRLDYKS*LFSSHWTFRSE Trigger: CTCACTCCTAAATGTCCAGTGACTTGAGAATAAGCAAGATTTATAGTCCAACCTTTGATGCCATTTTCTCCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| 3UTR-3UTR CAA 90 bp | CAAGAGCTGGTCCTTAATGGAAAATGTCCTACTGGATTTAAACAAACAGATAAACTTCCATTAGCCCAGTaGGTCCTTTTTCCTAAAATT | + |
|
Preference number: 3 (lower is better) Translates to: QELVLNGKCPTGFKQTDKLPLAQ*VLFPKI Trigger: AATTTTAGGAAAAAGGACCAACTGGGCTAATGGAAG...TTTATCTGTTTGTTTAAATCCAGTAGGACATTTTCCATTAAGGACCAGCTCTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR CCA 72 bp | ACTAACATAAATAAGGTGTACTTCAAATCTTATGGCTaGTTCGCTCAGCTCATTTTAATTTGGCTCAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: TNINKVYFKSYG*FAQLILIWLRV Trigger: AACTCTGAGCCAAATTAAAATGAGCTGAGCGAACCAGCCATAAGATTTGAAGTACACCTTATTTATGTTAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR CCA 90 bp | GCTCCTTCCACCAGGAATGCCTTCGCTATCTCCTCGCGCCAGCAGGTGTCTGCAGGCCCCAAACAGGAATaGTCTGGGAGTGCACAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: APSTRNAFAISSRQQVSAGPKQE*SGSAQR Trigger: TCGCTGTGCACTCCCAGACCATTCCTGTTTGGGGCC...TGCAGACACCTGCTGGCGCGAGGAGATAGCGAAGGCATTCCTGGTGGAAGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR GCA 90 bp | GCTCCTTCCACCAGGAATGCCTTCGCTATCTCCTCGCGCCAGCAGGTGTCTGCAGGAATGGTCTGGGAGTaGACAGCGATTGCAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: APSTRNAFAISSRQQVSAGMVWE*TAIAGV Trigger: AACACCTGCAATCGCTGTGCACTCCCAGACCATTCC...TGCAGACACCTGCTGGCGCGAGGAGATAGCGAAGGCATTCCTGGTGGAAGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR CCA 90 bp | GCAACCTGCCACGGCGGACAGAACAGATCCTCTGCTCTGCTGCTCTCACCACCACTTCTTGTTCTCCAGTaGGTAGAGCAGCTGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ATCHGGQNRSSALLLSPPLLVLQ*VEQLTG Trigger: CCCAGTCAGCTGCTCTACCCACTGGAGAACAAGAAG...TGGTGGTGAGAGCAGCAGAGCAGAGGATCTGTTCTGTCCGCCGTGGCAGGTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR CCA 90 bp | AGGCTCCCCGGTCTGCAGAGGCAGCTGAAGGGACATAGCCAGCAAATGCCACCTCTTCTTGTTCTCCAGTaGGTAGAGCAGCTGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLPGLQRQLKGHSQQMPPLLVLQ*VEQLTG Trigger: CCCAGTCAGCTGCTCTACCCACTGGAGAACAAGAAG...AGGTGGCATTTGCTGGCTATGTCCCTTCAGCTGCCTCTGCAGACCGGGGAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR CCA 90 bp | TTCAGGGCTGGAGAGGTTGATGCTCTTGCAGAGAGCCTGGGCCTGATTCCCAGCAGGCCTGCCAGAAACTaGCAGCTCCTGTCAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FRAGEVDALAESLGLIPSRPARN*QLLSAN Trigger: GTTTGCTGACAGGAGCTGCCAGTTTCTGGCAGGCCT...GCTGGGAATCAGGCCCAGGCTCTCTGCAAGAGCATCAACCTCTCCAGCCCTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR TCA 90 bp | ATAGCCCTTTGTGAGCTCCTCAGACATCAGGCACTCAGGATGCCCAGACATCCAATGTCAGCTGACAGCTaGTGCGTGCCGTGCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IALCELLRHQALRMPRHPMSADS*CVPCSL Trigger: GAGGGAGCACGGCACGCATCAGCTGTCAGCTGACAT...TGGATGTCTGGGCATCCTGAGTGCCTGATGTCTGAGGAGCTCACAAAGGGCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR CCA 90 bp | GCTCCTTCCACCAGGAATGCCTTCGCTATCTCCTCGCGCCAGCAGGTGTCTGCATTGCAGAGAAAGCAATaGCTCCATTTCCTGCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: APSTRNAFAISSRQQVSALQRKQ*LHFLPS Trigger: GGACGGCAGGAAATGGAGCCATTGCTTTCTCTGCAA...TGCAGACACCTGCTGGCGCGAGGAGATAGCGAAGGCATTCCTGGTGGAAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| 3UTR CAA 72 bp | GCTCCTGTGAGCCAAACTAAGCTAGGCCCTCACTTCTaGATCCTCCAGGAAGACACCTGGGAAAGGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: APVSQTKLGPHF*ILQEDTWERPR Trigger: CCGTGGCCTTTCCCAGGTGTCTTCCTGGAGGATCAAGAAGTGAGGGCCTAGCTTAGTTTGGCTCACAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR TCA 90 bp | GCAGCTGGATTTAAGTCCATGTGGCACGCGGAGAAAATGGCATCAAAGGTTGGAATGTCAGCTGACAGCTaGTGCGTGCCGTGCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AAGFKSMWHAEKMASKVGMSADS*CVPCSL Trigger: GAGGGAGCACGGCACGCATCAGCTGTCAGCTGACAT...TCCAACCTTTGATGCCATTTTCTCCGCGTGCCACATGGACTTAAATCCAGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| 3UTR CAA 72 bp | ACCTGCCCATTACCAGGCTTAGGAAGGGGCACACCTTaGAAAGCAGCTGGATTTAAGTCCATGTGGCACGCG | + |
|
Preference number: 4 (lower is better) Translates to: TCPLPGLGRGTP*KAAGFKSMWHA Trigger: CGCGTGCCACATGGACTTAAATCCAGCTGCTTTCAAAGGTGTGCCCCTTCCTAAGCCTGGTAATGGGCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| 3UTR CAA 72 bp | CTTACTCACTTCTCCACACTAGCAGAACCATGCCACTaGCCCTATCGAGGACTGTGCTGGTGCACACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTHFSTLAEPCH*PYRGLCWCTHC Trigger: ACAGTGTGTGCACCAGCACAGTCCTCGATAGGGCAAGTGGCATGGTTCTGCTAGTGTGGAGAAGTGAGTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR TCA 90 bp | CTCAGAAATCGACCTGCCTCTTCCACCCAAGTGCTGGGATTAAAGGCGTGCGCCCTGTCATCTTGGCTTTaGCCTTCTTTCCACATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRNRPASSTQVLGLKACALSSWL*PSFHIA Trigger: TGCTATGTGGAAAGAAGGTCAAAGCCAAGATGACAG...GGCGCACGCCTTTAATCCCAGCACTTGGGTGGAAGAGGCAGGTCGATTTCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR GCA 90 bp | ATAGCCCTTTGTGAGCTCCTCAGACATCAGGCACTCAGGATGCCCAGACATCCAATAAAAGGCTCCTCATaGCGGACCTCTCACCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: IALCELLRHQALRMPRHPIKGSS*RTSHLM Trigger: CATCAGGTGAGAGGTCCGGCATGAGGAGCCTTTTAT...TGGATGTCTGGGCATCCTGAGTGCCTGATGTCTGAGGAGCTCACAAAGGGCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR CCA 90 bp | TCACTTCTCCACACTAGCAGAACCATGCCACTTGCCCTATCGAGGACTGTGCTGTCAGCAAACAGGTACTaGGCGTGCGTCTTCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLLHTSRTMPLALSRTVLSANRY*ACVFLF Trigger: GAACAAGAAGACGCACGCCCAGTACCTGTTTGCTGA...CAGCACAGTCCTCGATAGGGCAAGTGGCATGGTTCTGCTAGTGTGGAGAAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR CCA 90 bp | GAGGCCAAAATAAACACTGGTGAGGCGTTAAAGGGTGGAAAAGCGTGGAGAGAGAGGCCTGCCAGAAACTaGCAGCTCCTGTCAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EAKINTGEALKGGKAWRERPARN*QLLSAN Trigger: GTTTGCTGACAGGAGCTGCCAGTTTCTGGCAGGCCT...CTCTCTCCACGCTTTTCCACCCTTTAACGCCTCACCAGTGTTTATTTTGGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR TCA 90 bp | GCTCCTTCCACCAGGAATGCCTTCGCTATCTCCTCGCGCCAGCAGGTGTCTGCACAAAGAAATGATGGTTaGACATGTTATAGCGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: APSTRNAFAISSRQQVSAQRNDG*TCYSGK Trigger: TTTGCCGCTATAACATGTTCAACCATCATTTCTTTG...TGCAGACACCTGCTGGCGCGAGGAGATAGCGAAGGCATTCCTGGTGGAAGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR TCA 90 bp | TTCAGGGCTGGAGAGGTTGATGCTCTTGCAGAGAGCCTGGGCCTGATTCCCAGCAAGCTCGGGAAAAACTaGCAAATCCGTGATTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FRAGEVDALAESLGLIPSKLGKN*QIRDSK Trigger: TTTTGAATCACGGATTTGTCAGTTTTTCCCGAGCTT...GCTGGGAATCAGGCCCAGGCTCTCTGCAAGAGCATCAACCTCTCCAGCCCTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR GCA 90 bp | GCAGCTGGATTTAAGTCCATGTGGCACGCGGAGAAAATGGCATCAAAGGTTGGAGGAATGGTCTGGGAGTaGACAGCGATTGCAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AAGFKSMWHAEKMASKVGGMVWE*TAIAGV Trigger: AACACCTGCAATCGCTGTGCACTCCCAGACCATTCC...TCCAACCTTTGATGCCATTTTCTCCGCGTGCCACATGGACTTAAATCCAGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR TCA 90 bp | ATAGCCCTTTGTGAGCTCCTCAGACATCAGGCACTCAGGATGCCCAGACATCCACCAAGGGCAACTGAATaGAACTCAGGTACCTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: IALCELLRHQALRMPRHPPRATE*NSGTFL Trigger: TAGAAAGGTACCTGAGTTTCATTCAGTTGCCCTTGG...TGGATGTCTGGGCATCCTGAGTGCCTGATGTCTGAGGAGCTCACAAAGGGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR TCA 90 bp | TTCAGGGCTGGAGAGGTTGATGCTCTTGCAGAGAGCCTGGGCCTGATTCCCAGCTTCCAGGTAAAACTGTaGATATCGAAAGTCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: FRAGEVDALAESLGLIPSFQVKL*ISKVNV Trigger: GACATTGACTTTCGATATTCACAGTTTTACCTGGAA...GCTGGGAATCAGGCCCAGGCTCTCTGCAAGAGCATCAACCTCTCCAGCCCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR TCA 90 bp | ATAGCCCTTTGTGAGCTCCTCAGACATCAGGCACTCAGGATGCCCAGACATCCACTGTCATCTTGGCTTTaGCCTTCTTTCCACATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IALCELLRHQALRMPRHPLSSWL*PSFHIA Trigger: TGCTATGTGGAAAGAAGGTCAAAGCCAAGATGACAG...TGGATGTCTGGGCATCCTGAGTGCCTGATGTCTGAGGAGCTCACAAAGGGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR GCA 90 bp | GCAGCTGGATTTAAGTCCATGTGGCACGCGGAGAAAATGGCATCAAAGGTTGGAAACAGGTACTGGGCGTaGGTCTTCTTGTTCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AAGFKSMWHAEKMASKVGNRYWA*VFLFSS Trigger: ACTGGAGAACAAGAAGACGCACGCCCAGTACCTGTT...TCCAACCTTTGATGCCATTTTCTCCGCGTGCCACATGGACTTAAATCCAGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR CCA 90 bp | TTCAGGGCTGGAGAGGTTGATGCTCTTGCAGAGAGCCTGGGCCTGATTCCCAGCGATTATTTTGTTGGGTaGAACGTTGGTGAAAATTCG | + |
|
Preference number: 4 (lower is better) Translates to: FRAGEVDALAESLGLIPSDYFVG*NVGENS Trigger: CGAATTTTCACCAACGTTCCACCCAACAAAATAATC...GCTGGGAATCAGGCCCAGGCTCTCTGCAAGAGCATCAACCTCTCCAGCCCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR GCA 90 bp | TTTAAGAAAGGGATTAATACATGCGGCAGTCAGCAGGGGCAGAGAAATGAAACTGGTAGCAAGGAGGCCTaGCAGAAACTGGCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FKKGINTCGSQQGQRNETGSKEA*QKLAAP Trigger: AGGAGCTGCCAGTTTCTGGCAGGCCTCCTTGCTACC...AGTTTCATTTCTCTGCCCCTGCTGACTGCCGCATGTATTAATCCCTTTCTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR GCA 90 bp | TGTGGCACGCGGAGAAAATGGCATCAAAGGTTGGACTATAAATCTTGCTTATTCGGTAGCAAGGAGGCCTaGCAGAAACTGGCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CGTRRKWHQRLDYKSCLFGSKEA*QKLAAP Trigger: AGGAGCTGCCAGTTTCTGGCAGGCCTCCTTGCTACC...GAATAAGCAAGATTTATAGTCCAACCTTTGATGCCATTTTCTCCGCGTGCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR TCA 90 bp | TCACTTCTCCACACTAGCAGAACCATGCCACTTGCCCTATCGAGGACTGTGCTGAACGATTTAGCACTCTaGAAAATTCTGAGTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLLHTSRTMPLALSRTVLNDLAL*KILSPL Trigger: CAGAGGACTCAGAATTTTTCAGAGTGCTAAATCGTT...CAGCACAGTCCTCGATAGGGCAAGTGGCATGGTTCTGCTAGTGTGGAGAAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR CCA 90 bp | GAGGCCAAAATAAACACTGGTGAGGCGTTAAAGGGTGGAAAAGCGTGGAGAGAGTTGCAGGTGTTACAATaGATCCAGGAAGGCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: EAKINTGEALKGGKAWRELQVLQ*IQEGFT Trigger: TGTGAAGCCTTCCTGGATCCATTGTAACACCTGCAA...CTCTCTCCACGCTTTTCCACCCTTTAACGCCTCACCAGTGTTTATTTTGGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR TCA 90 bp | CACCCCAATGGGCTTGTCTCTTTGCTACATTTATACTGCTCAACTCAGCACTTCCGAGAGACATATCTCTaGCAGAGGGAGCAAAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HPNGLVSLLHLYCSTQHFRETYL*QREQNL Trigger: CAGATTTTGCTCCCTCTGTCAGAGATATGTCTCTCG...GAAGTGCTGAGTTGAGCAGTATAAATGTAGCAAAGAGACAAGCCCATTGGGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR GCA 90 bp | CACCAATATGAAGATTCAATTTTCAGCTGGGCGTGGTGGTGCACGCTTTTAATCAACAGGTACTGGGCGTaGGTCTTCTTGTTCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HQYEDSIFSWAWWCTLLINRYWA*VFLFSS Trigger: ACTGGAGAACAAGAAGACGCACGCCCAGTACCTGTT...GATTAAAAGCGTGCACCACCACGCCCAGCTGAAAATTGAATCTTCATATTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR TCA 90 bp | TTGAAAGCAGCTGGATTTAAGTCCATGTGGCACGCGGAGAAAATGGCATCAAAGCCAAGGGCAACTGAATaGAACTCAGGTACCTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LKAAGFKSMWHAEKMASKPRATE*NSGTFL Trigger: TAGAAAGGTACCTGAGTTTCATTCAGTTGCCCTTGG...CTTTGATGCCATTTTCTCCGCGTGCCACATGGACTTAAATCCAGCTGCTTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCTGGATTTAAGTCCATGTGGCACGCGGAGAAAATGGCATCAAAGGTTGGAATTTCCTGCCGTCCTTaGATGTGCAAGAATTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: AAGFKSMWHAEKMASKVGISCRP*MCKNYN Trigger: ATTGTAATTCTTGCACATCCAAGGACGGCAGGAAAT...TCCAACCTTTGATGCCATTTTCTCCGCGTGCCACATGGACTTAAATCCAGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR GCA 90 bp | CTAACCATGACAACAAGGAAAGAGATGGGCCTGATCACACAAAAGACATTTCCGGCTTCACACACTTTTTaGAGAGAAAGCAATGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTMTTRKEMGLITQKTFPASHTF*RESNGS Trigger: GGAGCCATTGCTTTCTCTGCAAAAAGTGTGTGAAGC...CGGAAATGTCTTTTGTGTGATCAGGCCCATCTCTTTCCTTGTTGTCATGGTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR CCA 90 bp | ATCAAAGGTTGGACTATAAATCTTGCTTATTCTCAAGTCACTGGACATTTAGGAGGCCCCAAACAGGAATaGTCTGGGAGTGCACAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: IKGWTINLAYSQVTGHLGGPKQE*SGSAQR Trigger: TCGCTGTGCACTCCCAGACCATTCCTGTTTGGGGCC...TCCTAAATGTCCAGTGACTTGAGAATAAGCAAGATTTATAGTCCAACCTTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR TCA 90 bp | AAAGAGGCCAAAATAAACACTGGTGAGGCGTTAAAGGGTGGAAAAGCGTGGAGAAAGCTCGGGAAAAACTaGCAAATCCGTGATTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KEAKINTGEALKGGKAWRKLGKN*QIRDSK Trigger: TTTTGAATCACGGATTTGTCAGTTTTTCCCGAGCTT...TCTCCACGCTTTTCCACCCTTTAACGCCTCACCAGTGTTTATTTTGGCCTCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR CCA 90 bp | CGGAGAAAATGGCATCAAAGGTTGGACTATAAATCTTGCTTATTCTCAAGTCACTTGCAGAGAAAGCAATaGCTCCATTTCCTGCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRKWHQRLDYKSCLFSSHLQRKQ*LHFLPS Trigger: GGACGGCAGGAAATGGAGCCATTGCTTTCTCTGCAA...GTGACTTGAGAATAAGCAAGATTTATAGTCCAACCTTTGATGCCATTTTCTCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR TCA 90 bp | AGGTCTGTGAGAACAAGTCATGACCAAAATCTCACAAAAAGCCTCACAATGTATCGAGAGACATATCTCTaGCAGAGGGAGCAAAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSVRTSHDQNLTKSLTMYRETYL*QREQNL Trigger: CAGATTTTGCTCCCTCTGTCAGAGATATGTCTCTCG...ATACATTGTGAGGCTTTTTGTGAGATTTTGGTCATGACTTGTTCTCACAGACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR GCA 90 bp | CAGCACCATTCCAGTTCACATCTGAGGGAAAAATTAACCATGGAAAAACAAACTTGCCGTCCTTGGATGTaGAAGAATTACAATGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: QHHSSSHLREKLTMEKQTCRPWM*KNYNAH Trigger: GTGTGCATTGTAATTCTTGCACATCCAAGGACGGCA...AGTTTGTTTTTCCATGGTTAATTTTTCCCTCAGATGTGAACTGGAATGGTGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR GCA 90 bp | AGGTCTGTGAGAACAAGTCATGACCAAAATCTCACAAAAAGCCTCACAATGTATGCTTCACACACTTTTTaGAGAGAAAGCAATGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSVRTSHDQNLTKSLTMYASHTF*RESNGS Trigger: GGAGCCATTGCTTTCTCTGCAAAAAGTGTGTGAAGC...ATACATTGTGAGGCTTTTTGTGAGATTTTGGTCATGACTTGTTCTCACAGACCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR CCA 90 bp | CAGCACCATTCCAGTTCACATCTGAGGGAAAAATTAACCATGGAAAAACAAACTTTGCAGGTGTTACAATaGATCCAGGAAGGCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: QHHSSSHLREKLTMEKQTLQVLQ*IQEGFT Trigger: TGTGAAGCCTTCCTGGATCCATTGTAACACCTGCAA...AGTTTGTTTTTCCATGGTTAATTTTTCCCTCAGATGTGAACTGGAATGGTGCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR CCA 90 bp | TGTGACGCTTCCAGTTATAAGGCAACAAATTCAGCCCTTTTCTGCTTTGGAATTATTTCCTGCCGTCCTTaGATGTGCAAGAATTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: CDASSYKATNSALFCFGIISCRP*MCKNYN Trigger: ATTGTAATTCTTGCACATCCAAGGACGGCAGGAAAT...AATTCCAAAGCAGAAAAGGGCTGAATTTGTTGCCTTATAACTGGAAGCGTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR TCA 90 bp | TCAAGGTCTGTGAGAACAAGTCATGACCAAAATCTCACAAAAAGCCTCACAATGCAAAGAAATGATGGTTaGACATGTTATAGCGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SRSVRTSHDQNLTKSLTMQRNDG*TCYSGK Trigger: TTTGCCGCTATAACATGTTCAACCATCATTTCTTTG...CATTGTGAGGCTTTTTGTGAGATTTTGGTCATGACTTGTTCTCACAGACCTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR GCA 90 bp | ATCAAAGGTTGGACTATAAATCTTGCTTATTCTCAAGTCACTGGACATTTAGGATGCCGTCCTTGGATGTaGAAGAATTACAATGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: IKGWTINLAYSQVTGHLGCRPWM*KNYNAH Trigger: GTGTGCATTGTAATTCTTGCACATCCAAGGACGGCA...TCCTAAATGTCCAGTGACTTGAGAATAAGCAAGATTTATAGTCCAACCTTTGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR GCA 90 bp | CGGAGAAAATGGCATCAAAGGTTGGACTATAAATCTTGCTTATTCTCAAGTCACCGTTTTCTTTGCTTCTaGTTTCTGACAGCTTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RRKWHQRLDYKSCLFSSHRFLCF*FLTALL Trigger: TAACAAAGCTGTCAGAAAGCAGAAGCAAAGAAAACG...GTGACTTGAGAATAAGCAAGATTTATAGTCCAACCTTTGATGCCATTTTCTCCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGACAATACCTATAATACCATCATAGCAGCTGAAGCTTCAAAAACCTCTGTTTCTTCCTTCCCTTaGTTCACTTTTACAAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KADNTYNTIIAAEASKTSVSSFP*FTFTKR Trigger: TCTCTTTGTAAAAGTGAACCAAGGGAAGGAAGAAAC...AGAGGTTTTTGAAGCTTCAGCTGCTATGATGGTATTATAGGTATTGTCTGCCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR CCA 90 bp | AGGTCTGTGAGAACAAGTCATGACCAAAATCTCACAAAAAGCCTCACAATGTATGTTTCTTCCTTCCCTTaGTTCACTTTTACAAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSVRTSHDQNLTKSLTMYVSSFP*FTFTKR Trigger: TCTCTTTGTAAAAGTGAACCAAGGGAAGGAAGAAAC...ATACATTGTGAGGCTTTTTGTGAGATTTTGGTCATGACTTGTTCTCACAGACCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR CCA 90 bp | AGGTCTGTGAGAACAAGTCATGACCAAAATCTCACAAAAAGCCTCACAATGTATGATTATTTTGTTGGGTaGAACGTTGGTGAAAATTCG | + |
|
Preference number: 4 (lower is better) Translates to: RSVRTSHDQNLTKSLTMYDYFVG*NVGENS Trigger: CGAATTTTCACCAACGTTCCACCCAACAAAATAATC...ATACATTGTGAGGCTTTTTGTGAGATTTTGGTCATGACTTGTTCTCACAGACCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| 3UTR CAA 72 bp | CTCAGCAGAACTCTAATGATTTATATCTTCCATATTTaGTGCTATGGACTAAGAATACCCACCAGCTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSRTLMIYIFHI*CYGLRIPTSSK Trigger: TTTTGAGCTGGTGGGTATTCTTAGTCCATAGCACAAAATATGGAAGATATAAATCATTAGAGTTCTGCTGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS GCA 90 bp | TCCAACACACAACACTCTGCTGAATCCGAGGGTAGCAAGGAGGCCTaGCAGAAACTGGCAGCTCCTGTCAGCAAACAGGTACTGGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SNTQHSAESEGSKEA*QKLAAPVSKQVLGV Trigger: CACGCCCAGTACCTGTTTGCTGACAGGAGCTGCCAGTTTCTGGCAGGCCTCCTTGCTACCCTCGGATTCAGCAGAGTGTTGTGTGTTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS CCA 90 bp | ACTGGGCGTGCGTCTTCTTGTTCTCCAGTGGGTAGAGCAGCTGACTaGGCCTTCCAAGCTGGGCGACAGAAATGTCAGCTGACAGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: TGRASSCSPVGRAAD*AFQAGRQKCQLTAD Trigger: ATCAGCTGTCAGCTGACATTTCTGTCGCCCAGCTTGGAAGGCCCAGTCAGCTGCTCTACCCACTGGAGAACAAGAAGACGCACGCCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS CCA 90 bp | CCTGTCAGCAAACAGGTACTGGGCGTGCGTCTTCTTGTTCTCCAGTaGGTAGAGCAGCTGACTGGGCCTTCCAAGCTGGGCGACAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PVSKQVLGVRLLVLQ*VEQLTGPSKLGDRN Trigger: ATTTCTGTCGCCCAGCTTGGAAGGCCCAGTCAGCTGCTCTACCCACTGGAGAACAAGAAGACGCACGCCCAGTACCTGTTTGCTGACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS CCA 90 bp | CTCATGCCGGACCTCTCACCTGATGCTGTTAGCCTGATCTGCTCGTaGAGCCTTGGTGCTCCAACACACAACACTCTGCTGAATCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LMPDLSPDAVSLICS*SLGAPTHNTLLNPR Trigger: CCTCGGATTCAGCAGAGTGTTGTGTGTTGGAGCACCAAGGCTCCACGAGCAGATCAGGCTAACAGCATCAGGTGAGAGGTCCGGCATGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS GCA 90 bp | AGGCTCCTCATGCCGGACCTCTCACCTGATGCTGTTAGCCTGATCTaGTCGTGGAGCCTTGGTGCTCCAACACACAACACTCTGCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RLLMPDLSPDAVSLI*SWSLGAPTHNTLLN Trigger: ATTCAGCAGAGTGTTGTGTGTTGGAGCACCAAGGCTCCACGAGCAGATCAGGCTAACAGCATCAGGTGAGAGGTCCGGCATGAGGAGCCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS-3UTR CAA 90 bp | TTCAGGGCTGGAGAGGTTGATGCTCTTGCAGAGAGCCTGGGCCTGATTCCCAGCTCCTGTAAGAATTCCTaGCACACTTCAAGGGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FRAGEVDALAESLGLIPSSCKNS*HTSRAA Trigger: GGCTGCCCTTGAAGTGTGCAAGGAATTCTTACAGGA...GCTGGGAATCAGGCCCAGGCTCTCTGCAAGAGCATCAACCTCTCCAGCCCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR CAA 90 bp | GCAACCTGCCACGGCGGACAGAACAGATCCTCTGCTCTGCTGCTCTCACCACCAGCTGTCATCTTGGCTTaGACCTTCTTTCCACATAGC | + |
|
Preference number: 5 (lower is better) Translates to: ATCHGGQNRSSALLLSPPAVILA*TFFPHS Trigger: GCTATGTGGAAAGAAGGTCAAAGCCAAGATGACAGC...TGGTGGTGAGAGCAGCAGAGCAGAGGATCTGTTCTGTCCGCCGTGGCAGGTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR CAA 90 bp | GCACCTCAAGGGATGCCTGACTTCTGTGTCCCAAGCTTCCTGAAAGCAAGCTGTTCTGCTCGTGGAGCCTaGGTGCTCCAACACACAACA | + |
|
Preference number: 5 (lower is better) Translates to: APQGMPDFCVPSFLKASCSARGA*VLQHTT Trigger: TGTTGTGTGTTGGAGCACCAAGGCTCCACGAGCAGA...ACAGCTTGCTTTCAGGAAGCTTGGGACACAGAAGTCAGGCATCCCTTGAGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR CAA 90 bp | GCTCCTTCCACCAGGAATGCCTTCGCTATCTCCTCGCGCCAGCAGGTGTCTGCATTTGTGGCTGTCATCTaGGCTTTGACCTTCTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: APSTRNAFAISSRQQVSAFVAVI*ALTFFP Trigger: TGGAAAGAAGGTCAAAGCCAAGATGACAGCCACAAA...TGCAGACACCTGCTGGCGCGAGGAGATAGCGAAGGCATTCCTGGTGGAAGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR CAA 90 bp | GACCAGGCTGACCTCAAACTCAGAAATCGACCTGCCTCTTCCACCCAAGTGCTGACCATAATCACCCCCTaGCCTTCCTCTTCCTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: DQADLKLRNRPASSTQVLTIITP*PSSSCK Trigger: CTTACAGGAAGAGGAAGGCAAGGGGGTGATTATGGT...CAGCACTTGGGTGGAAGAGGCAGGTCGATTTCTGAGTTTGAGGTCAGCCTGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR CAA 90 bp | GCTCCTTCCACCAGGAATGCCTTCGCTATCTCCTCGCGCCAGCAGGTGTCTGCAGGAAGGATTATTTTGTaGGGTGGAACGTTGGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: APSTRNAFAISSRQQVSAGRIIL*GGTLVK Trigger: TTTCACCAACGTTCCACCCAACAAAATAATCCTTCC...TGCAGACACCTGCTGGCGCGAGGAGATAGCGAAGGCATTCCTGGTGGAAGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR CAA 90 bp | GCTCCTTCCACCAGGAATGCCTTCGCTATCTCCTCGCGCCAGCAGGTGTCTGCATTGTACTTCTGTAGATaGCTCCTAGGAAGCTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: APSTRNAFAISSRQQVSALYFCR*LLGSLT Trigger: TGTCAAGCTTCCTAGGAGCAATCTACAGAAGTACAA...TGCAGACACCTGCTGGCGCGAGGAGATAGCGAAGGCATTCCTGGTGGAAGGAGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR CAA 90 bp | CTCAGAAATCGACCTGCCTCTTCCACCCAAGTGCTGGGATTAAAGGCGTGCGCCCATTTCCTGCCGTCCTaGGATGTGCAAGAATTACAA | + |
|
Preference number: 5 (lower is better) Translates to: LRNRPASSTQVLGLKACAHFLPS*DVQELQ Trigger: TTGTAATTCTTGCACATCCAAGGACGGCAGGAAATG...GGCGCACGCCTTTAATCCCAGCACTTGGGTGGAAGAGGCAGGTCGATTTCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS CCA 90 bp | AGCGCACCACAAATAAAGCAGCCATCTTTAGGCCCCAAACAGGAATaGTCTGGGAGTGCACAGCGATTGCAGGTGTTACAATGGATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SAPQIKQPSLGPKQE*SGSAQRLQVLQWIQ Trigger: CTGGATCCATTGTAACACCTGCAATCGCTGTGCACTCCCAGACCATTCCTGTTTGGGGCCTAAAGATGGCTGCTTTATTTGTGGTGCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS-3UTR CAA 90 bp | GACCAGGCTGACCTCAAACTCAGAAATCGACCTGCCTCTTCCACCCAAGTGCTGAAAATGGGCAGTTCTTaGTGGCTGTCATCTTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DQADLKLRNRPASSTQVLKMGSS*WLSSWL Trigger: AAGCCAAGATGACAGCCACAAAGAACTGCCCATTTT...CAGCACTTGGGTGGAAGAGGCAGGTCGATTTCTGAGTTTGAGGTCAGCCTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS TCA 90 bp | TTAGCTCTCCAAGAGGTGCCGATGTTGGGACAATTGCTGCGTTTGTaGTCCAGCGCACCACAAATAAAGCAGCCATCTTTAGGCCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LALQEVPMLGQLLRL*SSAPQIKQPSLGPK Trigger: TTTGGGGCCTAAAGATGGCTGCTTTATTTGTGGTGCGCTGGATCACAAACGCAGCAATTGTCCCAACATCGGCACCTCTTGGAGAGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS GCA 90 bp | AATAAAGCAGCCATCTTTAGGCCCCAAACAGGAATGGTCTGGGAGTaGACAGCGATTGCAGGTGTTACAATGGATCCAGGAAGGCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: NKAAIFRPQTGMVWE*TAIAGVTMDPGRLH Trigger: GTGAAGCCTTCCTGGATCCATTGTAACACCTGCAATCGCTGTGCACTCCCAGACCATTCCTGTTTGGGGCCTAAAGATGGCTGCTTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS CCA 90 bp | ACCACAAATAAAGCAGCCATCTTTAGGCCCCAAACAGGAATGGTCTaGGAGTGCACAGCGATTGCAGGTGTTACAATGGATCCAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TTNKAAIFRPQTGMV*ECTAIAGVTMDPGR Trigger: CCTTCCTGGATCCATTGTAACACCTGCAATCGCTGTGCACTCCCAGACCATTCCTGTTTGGGGCCTAAAGATGGCTGCTTTATTTGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS-3UTR CAA 90 bp | TCACTTCTCCACACTAGCAGAACCATGCCACTTGCCCTATCGAGGACTGTGCTGAGGAGGCTGGCATTTTaGATTATGAATTTCTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLLHTSRTMPLALSRTVLRRLAF*IMNFSG Trigger: GCCCGAGAAATTCATAATCAAAAATGCCAGCCTCCT...CAGCACAGTCCTCGATAGGGCAAGTGGCATGGTTCTGCTAGTGTGGAGAAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR CAA 90 bp | GCACCTCAAGGGATGCCTGACTTCTGTGTCCCAAGCTTCCTGAAAGCAAGCTGTAAAATGGGCAGTTCTTaGTGGCTGTCATCTTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: APQGMPDFCVPSFLKASCKMGSS*WLSSWL Trigger: AAGCCAAGATGACAGCCACAAAGAACTGCCCATTTT...ACAGCTTGCTTTCAGGAAGCTTGGGACACAGAAGTCAGGCATCCCTTGAGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS GCA 90 bp | GATTGCAGGTGTTACAATGGATCCAGGAAGGCTTCACACACTTTTTaGAGAGAAAGCAATGGCTCCATTTCCTGCCGTCCTTGGATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: DCRCYNGSRKASHTF*RESNGSISCRPWMC Trigger: GCACATCCAAGGACGGCAGGAAATGGAGCCATTGCTTTCTCTGCAAAAAGTGTGTGAAGCCTTCCTGGATCCATTGTAACACCTGCAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS-3UTR CAA 90 bp | CTGCTTTGGAATTTCTGCTTTGCTGCTATAAAACGGCATGCTCCTTCCACCAGGACCATAATCACCCCCTaGCCTTCCTCTTCCTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLWNFCFAAIKRHAPSTRTIITP*PSSSCK Trigger: CTTACAGGAAGAGGAAGGCAAGGGGGTGATTATGGT...CCTGGTGGAAGGAGCATGCCGTTTTATAGCAGCAAAGCAGAAATTCCAAAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR CAA 90 bp | GCACCTCAAGGGATGCCTGACTTCTGTGTCCCAAGCTTCCTGAAAGCAAGCTGTAGTCCTCTGAAAGCTTaGTACTTCTGTAGATTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: APQGMPDFCVPSFLKASCSPLKA*YFCRLL Trigger: GAGCAATCTACAGAAGTACAAAGCTTTCAGAGGACT...ACAGCTTGCTTTCAGGAAGCTTGGGACACAGAAGTCAGGCATCCCTTGAGGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS TCA 90 bp | GCTGGCAACTTTGACAGAACTTTCTTTGAGCCAAGGGCAACTGAATaGAACTCAGGTACCTTTCTATGCATTGTGCCCGGGATAGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AGNFDRTFFEPRATE*NSGTFLCIVPGIEE Trigger: CTCCTCTATCCCGGGCACAATGCATAGAAAGGTACCTGAGTTTCATTCAGTTGCCCTTGGCTCAAAGAAAGTTCTGTCAAAGTTGCCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS CCA 90 bp | AAACAGGAATGGTCTGGGAGTGCACAGCGATTGCAGGTGTTACAATaGATCCAGGAAGGCTTCACACACTTTTTGCAGAGAAAGCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: KQEWSGSAQRLQVLQ*IQEGFTHFLQRKQW Trigger: CCATTGCTTTCTCTGCAAAAAGTGTGTGAAGCCTTCCTGGATCCATTGTAACACCTGCAATCGCTGTGCACTCCCAGACCATTCCTGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS CCA 90 bp | CAATGGATCCAGGAAGGCTTCACACACTTTTTGCAGAGAAAGCAATaGCTCCATTTCCTGCCGTCCTTGGATGTGCAAGAATTACAATGC | + |
|
Preference number: 5 (lower is better) Translates to: QWIQEGFTHFLQRKQ*LHFLPSLDVQELQC Trigger: GCATTGTAATTCTTGCACATCCAAGGACGGCAGGAAATGGAGCCATTGCTTTCTCTGCAAAAAGTGTGTGAAGCCTTCCTGGATCCATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS-3UTR CAA 90 bp | TTGAAAGCAGCTGGATTTAAGTCCATGTGGCACGCGGAGAAAATGGCATCAAAGGCTGTCATCTTGGCTTaGACCTTCTTTCCACATAGC | + |
|
Preference number: 5 (lower is better) Translates to: LKAAGFKSMWHAEKMASKAVILA*TFFPHS Trigger: GCTATGTGGAAAGAAGGTCAAAGCCAAGATGACAGC...CTTTGATGCCATTTTCTCCGCGTGCCACATGGACTTAAATCCAGCTGCTTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR CAA 90 bp | CACCCCAATGGGCTTGTCTCTTTGCTACATTTATACTGCTCAACTCAGCACTTCGGCTTCACACACTTTTaGCAGAGAAAGCAATGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HPNGLVSLLHLYCSTQHFGFTHF*QRKQWL Trigger: GAGCCATTGCTTTCTCTGCAAAAAGTGTGTGAAGCC...GAAGTGCTGAGTTGAGCAGTATAAATGTAGCAAAGAGACAAGCCCATTGGGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR CAA 90 bp | CTGCTTTGGAATTTCTGCTTTGCTGCTATAAAACGGCATGCTCCTTCCACCAGGTTGACAGAACTTTCTTaGAGCCAAGGGCAACTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LLWNFCFAAIKRHAPSTRLTELS*SQGQLN Trigger: ATTCAGTTGCCCTTGGCTCAAAGAAAGTTCTGTCAA...CCTGGTGGAAGGAGCATGCCGTTTTATAGCAGCAAAGCAGAAATTCCAAAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR CAA 90 bp | CGGAGAAAATGGCATCAAAGGTTGGACTATAAATCTTGCTTATTCTCAAGTCACTCTGCTCGTGGAGCCTaGGTGCTCCAACACACAACA | + |
|
Preference number: 5 (lower is better) Translates to: RRKWHQRLDYKSCLFSSHSARGA*VLQHTT Trigger: TGTTGTGTGTTGGAGCACCAAGGCTCCACGAGCAGA...GTGACTTGAGAATAAGCAAGATTTATAGTCCAACCTTTGATGCCATTTTCTCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR CAA 90 bp | AAAGCAGCTGGATTTAAGTCCATGTGGCACGCGGAGAAAATGGCATCAAAGGTTTTTGTGGCTGTCATCTaGGCTTTGACCTTCTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KAAGFKSMWHAEKMASKVFVAVI*ALTFFP Trigger: TGGAAAGAAGGTCAAAGCCAAGATGACAGCCACAAA...AACCTTTGATGCCATTTTCTCCGCGTGCCACATGGACTTAAATCCAGCTGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS TCA 90 bp | CCTTGCACACTTCAAGGGCAGCCTTTCCATCAAAGAAATGATGGTTaGACATGTTATAGCGGCAAAAGCTTCCTTCCAGGTAAAACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PCTLQGQPFHQRNDG*TCYSGKSFLPGKTV Trigger: CACAGTTTTACCTGGAAGGAAGCTTTTGCCGCTATAACATGTTCAACCATCATTTCTTTGATGGAAAGGCTGCCCTTGAAGTGTGCAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS TCA 90 bp | GAATTACAATGCACACAGTGCTGGTTCTCACGAGAGACATATCTCTaGCAGAGGGAGCAAAATCTGTATCCTTCCTCTGATGGAAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: ELQCTQCWFSRETYL*QREQNLYPSSDGRI Trigger: AATCCTTCCATCAGAGGAAGGATACAGATTTTGCTCCCTCTGTCAGAGATATGTCTCTCGTGAGAACCAGCACTGTGTGCATTGTAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGCCACCCCAATGGGCTTGTCTCTTTGCTACATTTATACTGCTCAACTCAGTGTTTCTTCCTTCCCTaGGTTCACTTTTACAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSHPNGLVSLLHLYCSTQCFFLP*VHFYKE Trigger: CTCTTTGTAAAAGTGAACCAAGGGAAGGAAGAAACA...CTGAGTTGAGCAGTATAAATGTAGCAAAGAGACAAGCCCATTGGGGTGGCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR CAA 90 bp | AAAGCAGCTGGATTTAAGTCCATGTGGCACGCGGAGAAAATGGCATCAAAGGTTGGAAGGATTATTTTGTaGGGTGGAACGTTGGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: KAAGFKSMWHAEKMASKVGRIIL*GGTLVK Trigger: TTTCACCAACGTTCCACCCAACAAAATAATCCTTCC...AACCTTTGATGCCATTTTCTCCGCGTGCCACATGGACTTAAATCCAGCTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR CAA 90 bp | TCAAGGTCTGTGAGAACAAGTCATGACCAAAATCTCACAAAAAGCCTCACAATGAGGAGGCTGGCATTTTaGATTATGAATTTCTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SRSVRTSHDQNLTKSLTMRRLAF*IMNFSG Trigger: GCCCGAGAAATTCATAATCAAAAATGCCAGCCTCCT...CATTGTGAGGCTTTTTGTGAGATTTTGGTCATGACTTGTTCTCACAGACCTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR CAA 90 bp | CGGAGAAAATGGCATCAAAGGTTGGACTATAAATCTTGCTTATTCTCAAGTCACTGCTTTCTGACAGCTTaGTTAGCTCTCCAAGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RRKWHQRLDYKSCLFSSHCFLTA*LALQEV Trigger: CACCTCTTGGAGAGCTAACAAAGCTGTCAGAAAGCA...GTGACTTGAGAATAAGCAAGATTTATAGTCCAACCTTTGATGCCATTTTCTCCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR CAA 90 bp | ATCAAAGGTTGGACTATAAATCTTGCTTATTCTCAAGTCACTGGACATTTAGGATCCTGTAAGAATTCCTaGCACACTTCAAGGGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: IKGWTINLAYSQVTGHLGSCKNS*HTSRAA Trigger: GGCTGCCCTTGAAGTGTGCAAGGAATTCTTACAGGA...TCCTAAATGTCCAGTGACTTGAGAATAAGCAAGATTTATAGTCCAACCTTTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR CAA 90 bp | CGGAGAAAATGGCATCAAAGGTTGGACTATAAATCTTGCTTATTCTCAAGTCACGATGGAAGGATTATTTaGTTGGGTGGAACGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RRKWHQRLDYKSCLFSSHDGRII*LGGTLV Trigger: CACCAACGTTCCACCCAACAAAATAATCCTTCCATC...GTGACTTGAGAATAAGCAAGATTTATAGTCCAACCTTTGATGCCATTTTCTCCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR CAA 90 bp | ATAGCTCAAGAGCTGGTCCTTAATGGAAAATGTCCTACTGGATTTAAACAAACAGATGGAAGGATTATTTaGTTGGGTGGAACGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IAQELVLNGKCPTGFKQTDGRII*LGGTLV Trigger: CACCAACGTTCCACCCAACAAAATAATCCTTCCATC...TGTTTGTTTAAATCCAGTAGGACATTTTCCATTAAGGACCAGCTCTTGAGCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR CAA 90 bp | ATAGCTCAAGAGCTGGTCCTTAATGGAAAATGTCCTACTGGATTTAAACAAACACATTTCCTGCCGTCCTaGGATGTGCAAGAATTACAA | + |
|
Preference number: 5 (lower is better) Translates to: IAQELVLNGKCPTGFKQTHFLPS*DVQELQ Trigger: TTGTAATTCTTGCACATCCAAGGACGGCAGGAAATG...TGTTTGTTTAAATCCAGTAGGACATTTTCCATTAAGGACCAGCTCTTGAGCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031077.13 |
||
| CDS-3UTR CAA 90 bp | ATCAAAGGTTGGACTATAAATCTTGCTTATTCTCAAGTCACTGGACATTTAGGAGGCTTCACACACTTTTaGCAGAGAAAGCAATGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IKGWTINLAYSQVTGHLGGFTHF*QRKQWL Trigger: GAGCCATTGCTTTCTCTGCAAAAAGTGTGTGAAGCC...TCCTAAATGTCCAGTGACTTGAGAATAAGCAAGATTTATAGTCCAACCTTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS-3UTR CAA 90 bp | ATCAAAGGTTGGACTATAAATCTTGCTTATTCTCAAGTCACTGGACATTTAGGATGTTTCTTCCTTCCCTaGGTTCACTTTTACAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: IKGWTINLAYSQVTGHLGCFFLP*VHFYKE Trigger: CTCTTTGTAAAAGTGAACCAAGGGAAGGAAGAAACA...TCCTAAATGTCCAGTGACTTGAGAATAAGCAAGATTTATAGTCCAACCTTTGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
||
| CDS TCA 72 bp | CTTCCAAGCTGGGCGACAGAAATGTCAGCTGACAGCTaGTGCGTGCCGTGCTCCCTCCAGTCTGCAGGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: LPSWATEMSADS*CVPCSLQSAGN Trigger: GTTACCTGCAGACTGGAGGGAGCACGGCACGCATCAGCTGTCAGCTGACATTTCTGTCGCCCAGCTTGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS CCA 72 bp | AAACAGGTACTGGGCGTGCGTCTTCTTGTTCTCCAGTaGGTAGAGCAGCTGACTGGGCCTTCCAAGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: KQVLGVRLLVLQ*VEQLTGPSKLG Trigger: GCCCAGCTTGGAAGGCCCAGTCAGCTGCTCTACCCACTGGAGAACAAGAAGACGCACGCCCAGTACCTGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS CCA 72 bp | GCGTCTTCTTGTTCTCCAGTGGGTAGAGCAGCTGACTaGGCCTTCCAAGCTGGGCGACAGAAATGTCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ASSCSPVGRAAD*AFQAGRQKCQL Trigger: CAGCTGACATTTCTGTCGCCCAGCTTGGAAGGCCCAGTCAGCTGCTCTACCCACTGGAGAACAAGAAGACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS GCA 72 bp | CAACACTCTGCTGAATCCGAGGGTAGCAAGGAGGCCTaGCAGAAACTGGCAGCTCCTGTCAGCAAACAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: QHSAESEGSKEA*QKLAAPVSKQV Trigger: TACCTGTTTGCTGACAGGAGCTGCCAGTTTCTGGCAGGCCTCCTTGCTACCCTCGGATTCAGCAGAGTGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS CCA 72 bp | GACCTCTCACCTGATGCTGTTAGCCTGATCTGCTCGTaGAGCCTTGGTGCTCCAACACACAACACTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DLSPDAVSLICS*SLGAPTHNTLL Trigger: CAGCAGAGTGTTGTGTGTTGGAGCACCAAGGCTCCACGAGCAGATCAGGCTAACAGCATCAGGTGAGAGGTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS CAA 90 bp | TCCACCAAGCCGCCAAAGGGAGGGTCTGTCACCATAATCACCCCCTaGCCTTCCTCTTCCTGTAAGAATTCCTTGCACACTTCAAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: STKPPKGGSVTIITP*PSSSCKNSLHTSRA Trigger: TGCCCTTGAAGTGTGCAAGGAATTCTTACAGGAAGAGGAAGGCAAGGGGGTGATTATGGTGACAGACCCTCCCTTTGGCGGCTTGGTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS CAA 72 bp | CCGCCAAAGGGAGGGTCTGTCACCATAATCACCCCCTaGCCTTCCTCTTCCTGTAAGAATTCCTTGCACACT | + |
|
Preference number: 6 (lower is better) Translates to: PPKGGSVTIITP*PSSSCKNSLHT Trigger: AGTGTGCAAGGAATTCTTACAGGAAGAGGAAGGCAAGGGGGTGATTATGGTGACAGACCCTCCCTTTGGCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS CCA 72 bp | TGGTCTGGGAGTGCACAGCGATTGCAGGTGTTACAATaGATCCAGGAAGGCTTCACACACTTTTTGCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: WSGSAQRLQVLQ*IQEGFTHFLQR Trigger: TCTCTGCAAAAAGTGTGTGAAGCCTTCCTGGATCCATTGTAACACCTGCAATCGCTGTGCACTCCCAGACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS CCA 72 bp | AAAGCAGCCATCTTTAGGCCCCAAACAGGAATGGTCTaGGAGTGCACAGCGATTGCAGGTGTTACAATGGAT | + |
|
Preference number: 6 (lower is better) Translates to: KAAIFRPQTGMV*ECTAIAGVTMD Trigger: ATCCATTGTAACACCTGCAATCGCTGTGCACTCCCAGACCATTCCTGTTTGGGGCCTAAAGATGGCTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS CAA 90 bp | CGATTGCAGGTGTTACAATGGATCCAGGAAGGCTTCACACACTTTTaGCAGAGAAAGCAATGGCTCCATTTCCTGCCGTCCTTGGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: RLQVLQWIQEGFTHF*QRKQWLHFLPSLDV Trigger: CACATCCAAGGACGGCAGGAAATGGAGCCATTGCTTTCTCTGCAAAAAGTGTGTGAAGCCTTCCTGGATCCATTGTAACACCTGCAATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS TCA 72 bp | CAAGAGGTGCCGATGTTGGGACAATTGCTGCGTTTGTaGTCCAGCGCACCACAAATAAAGCAGCCATCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: QEVPMLGQLLRL*SSAPQIKQPSL Trigger: TAAAGATGGCTGCTTTATTTGTGGTGCGCTGGATCACAAACGCAGCAATTGTCCCAACATCGGCACCTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS CCA 72 bp | CAGGAAGGCTTCACACACTTTTTGCAGAGAAAGCAATaGCTCCATTTCCTGCCGTCCTTGGATGTGCAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: QEGFTHFLQRKQ*LHFLPSLDVQE Trigger: TTCTTGCACATCCAAGGACGGCAGGAAATGGAGCCATTGCTTTCTCTGCAAAAAGTGTGTGAAGCCTTCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS CAA 72 bp | GTGTTACAATGGATCCAGGAAGGCTTCACACACTTTTaGCAGAGAAAGCAATGGCTCCATTTCCTGCCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VLQWIQEGFTHF*QRKQWLHFLPS Trigger: GGACGGCAGGAAATGGAGCCATTGCTTTCTCTGCAAAAAGTGTGTGAAGCCTTCCTGGATCCATTGTAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS GCA 72 bp | CATTTCCTGCCGTCCTTGGATGTGCAAGAATTACAATaGACACAGTGCTGGTTCTCACGAGAGACATATCTC | + |
|
Preference number: 6 (lower is better) Translates to: HFLPSLDVQELQ*TQCWFSRETYL Trigger: GAGATATGTCTCTCGTGAGAACCAGCACTGTGTGCATTGTAATTCTTGCACATCCAAGGACGGCAGGAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS GCA 72 bp | TGTTACAATGGATCCAGGAAGGCTTCACACACTTTTTaGAGAGAAAGCAATGGCTCCATTTCCTGCCGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CYNGSRKASHTF*RESNGSISCRP Trigger: AGGACGGCAGGAAATGGAGCCATTGCTTTCTCTGCAAAAAGTGTGTGAAGCCTTCCTGGATCCATTGTAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS TCA 72 bp | TTTGACAGAACTTTCTTTGAGCCAAGGGCAACTGAATaGAACTCAGGTACCTTTCTATGCATTGTGCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: FDRTFFEPRATE*NSGTFLCIVPG Trigger: CCCGGGCACAATGCATAGAAAGGTACCTGAGTTTCATTCAGTTGCCCTTGGCTCAAAGAAAGTTCTGTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
||
| CDS TCA 72 bp | TCTCTGACAGAGGGAGCAAAATCTGTATCCTTCCTCTaGTGGAAGGATTATTTTGTTGGGTGGAACGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: SLTEGAKSVSFL*WKDYFVGWNVG Trigger: ACCAACGTTCCACCCAACAAAATAATCCTTCCATCAGAGGAAGGATACAGATTTTGCTCCCTCTGTCAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
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| CDS CAA 90 bp | CAGAGGGAGCAAAATCTGTATCCTTCCTCTGATGGAAGGATTATTTaGTTGGGTGGAACGTTGGTGAAAATTCGGACAGGAGACTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: QREQNLYPSSDGRII*LGGTLVKIRTGDCF Trigger: AAAACAGTCTCCTGTCCGAATTTTCACCAACGTTCCACCCAACAAAATAATCCTTCCATCAGAGGAAGGATACAGATTTTGCTCCCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031077.13 ENSMUST00000113904.9 |
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| CDS CAA 72 bp | TTATTACGTTTTCTTTGCTTCTGCTTTCTGACAGCTTaGTTAGCTCTCCAAGAGGTGCCGATGTTGGGACAA | + |
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Preference number: 6 (lower is better) Translates to: LLRFLCFCFLTA*LALQEVPMLGQ Trigger: TTGTCCCAACATCGGCACCTCTTGGAGAGCTAACAAAGCTGTCAGAAAGCAGAAGCAAAGAAAACGTAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113904.9 |
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