Pregenerated sensors for ZCCHC24 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055538Ensembl transcript IDs: ENSMUST00000069180.8
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGCAGCAAGACTGGAGAGTCCTTGGTGCTGGATGCTCACCGTCTaGAGCCCAGCATGCTACCACTCGAGGGCAGCACGGTGGCAGCTA | + |
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Preference number: 1 (lower is better) Translates to: AAARLESPWCWMLTV*SPACYHSRAARWQL Trigger: TAGCTGCCACCGTGCTGCCCTCGAGTGGTAGCATGCTGGGCTGCAGACGGTGAGCATCCAGCACCAAGGACTCTCCAGTCTTGCTGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR CCA 90 bp | CTTCCAGGCAGGCCTGGAACCTCCTCCGGGGTCCTTGTACCTCCTTaGGTCCTGCTGACAAGGCCACTGGGCTCACAGACCAAAGGGTCT | + |
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Preference number: 1 (lower is better) Translates to: LPGRPGTSSGVLVPP*VLLTRPLGSQTKGS Trigger: AGACCCTTTGGTCTGTGAGCCCAGTGGCCTTGTCAGCAGGACCCAAGGAGGTACAAGGACCCCGGAGGAGGTTCCAGGCCTGCCTGGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR GCA 90 bp | CTGGAGAGTCCTTGGTGCTGGATGCTCACCGTCTGCAGCCCAGCATaGTACCACTCGAGGGCAGCACGGTGGCAGCTAATAGTCTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: LESPWCWMLTVCSPA*YHSRAARWQLIVWA Trigger: AGCCCAGACTATTAGCTGCCACCGTGCTGCCCTCGAGTGGTAGCATGCTGGGCTGCAGACGGTGAGCATCCAGCACCAAGGACTCTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR TCA 90 bp | GGCCTGGAACCTCCTCCGGGGTCCTTGTACCTCCTTGGGTCCTGCTaGCAAGGCCACTGGGCTCACAGACCAAAGGGTCTGTTTGTTCGA | + |
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Preference number: 1 (lower is better) Translates to: GLEPPPGSLYLLGSC*QGHWAHRPKGLFVR Trigger: TCGAACAAACAGACCCTTTGGTCTGTGAGCCCAGTGGCCTTGTCAGCAGGACCCAAGGAGGTACAAGGACCCCGGAGGAGGTTCCAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR TCA 90 bp | GGCCTCTGTCCTTCTACAGAGCCCAGGCCTATGGTGAAGAGACCCTaGGCCTCCTGTCTCTGCACCCTGTTGGGAGCATGTCAGCTACTC | + |
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Preference number: 1 (lower is better) Translates to: GLCPSTEPRPMVKRP*ASCLCTLLGACQLL Trigger: GAGTAGCTGACATGCTCCCAACAGGGTGCAGAGACAGGAGGCTCAGGGTCTCTTCACCATAGGCCTGGGCTCTGTAGAAGGACAGAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR TCA 90 bp | AGACCTCTGCTGGCCTCTGTCCTTCTACAGAGCCCAGGCCTATGGTaGAGAGACCCTGAGCCTCCTGTCTCTGCACCCTGTTGGGAGCAT | + |
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Preference number: 1 (lower is better) Translates to: RPLLASVLLQSPGLW*RDPEPPVSAPCWEH Trigger: ATGCTCCCAACAGGGTGCAGAGACAGGAGGCTCAGGGTCTCTTCACCATAGGCCTGGGCTCTGTAGAAGGACAGAGGCCAGCAGAGGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR TCA 90 bp | ATCCCGGTCATGGGTGGGAGGCTAAGGGTCAAGAGAGAGAGCAGGTaGCAGAACCCAAGCCTACAGGACAGTCTGGGGGAGGTCATGGGA | + |
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Preference number: 1 (lower is better) Translates to: IPVMGGRLRVKRESR*QNPSLQDSLGEVMG Trigger: TCCCATGACCTCCCCCAGACTGTCCTGTAGGCTTGGGTTCTGTCACCTGCTCTCTCTCTTGACCCTTAGCCTCCCACCCATGACCGGGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR TCA 90 bp | GTGAGACAAGGACACACGCCTCCTCTGCTTAAACCCACAGGCCCGTaGCATCTCCTCAAGCATGCGGACATTCAGCCCTTTGGGCAACAC | + |
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Preference number: 1 (lower is better) Translates to: VRQGHTPPLLKPTGP*HLLKHADIQPFGQH Trigger: GTGTTGCCCAAAGGGCTGAATGTCCGCATGCTTGAGGAGATGTCACGGGCCTGTGGGTTTAAGCAGAGGAGGCGTGTGTCCTTGTCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR CCA 90 bp | TTTTTCATACGAGGCAAGCTGCAAGGTGCTGGGTGGGACAGGGCCTaGTTGGTCTTGGAGGGAGAACTTCCCTCAGGCCTCAGGATTCAC | + |
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Preference number: 1 (lower is better) Translates to: FFIRGKLQGAGWDRA*LVLEGELPSGLRIH Trigger: GTGAATCCTGAGGCCTGAGGGAAGTTCTCCCTCCAAGACCAACCAGGCCCTGTCCCACCCAGCACCTTGCAGCTTGCCTCGTATGAAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR CCA 90 bp | TCAAGAGAGAGAGCAGGTGACAGAACCCAAGCCTACAGGACAGTCTaGGGGAGGTCATGGGAAGTGGTGATGCCTCATGTCCCTAGGATG | + |
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Preference number: 1 (lower is better) Translates to: SRERAGDRTQAYRTV*GRSWEVVMPHVPRM Trigger: CATCCTAGGGACATGAGGCATCACCACTTCCCATGACCTCCCCCAGACTGTCCTGTAGGCTTGGGTTCTGTCACCTGCTCTCTCTCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR TCA 90 bp | GAACCCAAGCCTACAGGACAGTCTGGGGGAGGTCATGGGAAGTGGTaGTGCCTCATGTCCCTAGGATGTCTTGGCACACTGGTTACTGTT | + |
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Preference number: 1 (lower is better) Translates to: EPKPTGQSGGGHGKW*CLMSLGCLGTLVTV Trigger: AACAGTAACCAGTGTGCCAAGACATCCTAGGGACATGAGGCATCACCACTTCCCATGACCTCCCCCAGACTGTCCTGTAGGCTTGGGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR CCA 90 bp | GTACAGTGCAGTGATGTCAGGGCTGGTGAGATTAAGGACTCAGTGTaGGCAGGGACAGAGGGCCACTCCTCAGTAGCTGCTAGAAGAAGT | + |
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Preference number: 1 (lower is better) Translates to: VQCSDVRAGEIKDSV*AGTEGHSSVAARRS Trigger: ACTTCTTCTAGCAGCTACTGAGGAGTGGCCCTCTGTCCCTGCCCACACTGAGTCCTTAATCTCACCAGCCCTGACATCACTGCACTGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR GCA 90 bp | CTGTCTCATTGGCAGAGGGAGGCTGTGTTTAGCTACCAGGTACAGTaGAGTGATGTCAGGGCTGGTGAGATTAAGGACTCAGTGTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: LSHWQREAVFSYQVQ*SDVRAGEIKDSVWA Trigger: TGCCCACACTGAGTCCTTAATCTCACCAGCCCTGACATCACTGCACTGTACCTGGTAGCTAAACACAGCCTCCCTCTGCCAATGAGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR GCA 90 bp | CCCTCAAGGCGGGGCTCACGGGCTCTGTTTGTCTTTTTAGCTGAGTaGACACACATAGACAGATACAGACACAGACAGGGTCACCACACA | + |
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Preference number: 1 (lower is better) Translates to: PSRRGSRALFVFLAE*THIDRYRHRQGHHT Trigger: TGTGTGGTGACCCTGTCTGTGTCTGTATCTGTCTATGTGTGTGCACTCAGCTAAAAAGACAAACAGAGCCCGTGAGCCCCGCCTTGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR GCA 90 bp | TCCAAAGACACTCAGGATGAGAGCTTTCAAGAACATCGAGACCTCTaGTGGCCTCTGTCCTTCTACAGAGCCCAGGCCTATGGTGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: SKDTQDESFQEHRDL*WPLSFYRAQAYGEE Trigger: CTCTTCACCATAGGCCTGGGCTCTGTAGAAGGACAGAGGCCAGCAGAGGTCTCGATGTTCTTGAAAGCTCTCATCCTGAGTGTCTTTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR GCA 90 bp | TTGGCACACTGGTTACTGTTCGATGTCTCCATTGCCTCACCCTCTTaGCTGTCTCATTGGCAGAGGGAGGCTGTGTTTAGCTACCAGGTA | + |
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Preference number: 1 (lower is better) Translates to: LAHWLLFDVSIASPS*LSHWQREAVFSYQV Trigger: TACCTGGTAGCTAAACACAGCCTCCCTCTGCCAATGAGACAGGCAAGAGGGTGAGGCAATGGAGACATCGAACAGTAACCAGTGTGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR GCA 90 bp | GCTCAGAGAGTATGTTCTCCCAAAATCTACCCTGCAGCTAGCTGCTaGAGACATACAACCATCTCTTCCACTTACCCCCTGGACCCTTGC | + |
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Preference number: 1 (lower is better) Translates to: AQRVCSPKIYPAASC*RHTTISSTYPLDPC Trigger: GCAAGGGTCCAGGGGGTAAGTGGAAGAGATGGTTGTATGTCTGCAGCAGCTAGCTGCAGGGTAGATTTTGGGAGAACATACTCTCTGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR CCA 90 bp | AAAGACACTCAGGATGAGAGCTTTCAAGAACATCGAGACCTCTGCTaGCCTCTGTCCTTCTACAGAGCCCAGGCCTATGGTGAAGAGACC | + |
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Preference number: 1 (lower is better) Translates to: KDTQDESFQEHRDLC*PLSFYRAQAYGEET Trigger: GGTCTCTTCACCATAGGCCTGGGCTCTGTAGAAGGACAGAGGCCAGCAGAGGTCTCGATGTTCTTGAAAGCTCTCATCCTGAGTGTCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR CCA 90 bp | GTCCACTGTGGCTACAGATCAGGAATGACTTGGGACTTTCTAGAGTaGTTTTTCATACGAGGCAAGCTGCAAGGTGCTGGGTGGGACAGG | + |
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Preference number: 1 (lower is better) Translates to: VHCGYRSGMTWDFLE*FFIRGKLQGAGWDR Trigger: CCTGTCCCACCCAGCACCTTGCAGCTTGCCTCGTATGAAAAACCACTCTAGAAAGTCCCAAGTCATTCCTGATCTGTAGCCACAGTGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR CCA 90 bp | GGACATCAATCAGGTAAGGAGGGCTATAGGAGAGGACATCTTAAGTaGCTATCAGGACAGAGGCTGGAGGGCGGGGCACCTAGATGTTTA | + |
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Preference number: 1 (lower is better) Translates to: GHQSGKEGYRRGHLK*LSGQRLEGGAPRCL Trigger: TAAACATCTAGGTGCCCCGCCCTCCAGCCTCTGTCCTGATAGCCACTTAAGATGTCCTCTCCTATAGCCCTCCTTACCTGATTGATGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR CCA 90 bp | CCAGCATGCTACCACTCGAGGGCAGCACGGTGGCAGCTAATAGTCTaGGCTGCCACAGATAATACCTTTGTTAAGTGCTCAGAGAGTATG | + |
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Preference number: 1 (lower is better) Translates to: PACYHSRAARWQLIV*AATDNTFVKCSESM Trigger: CATACTCTCTGAGCACTTAACAAAGGTATTATCTGTGGCAGCCCAGACTATTAGCTGCCACCGTGCTGCCCTCGAGTGGTAGCATGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR GCA 90 bp | AGTGCTCAGAGAGTATGTTCTCCCAAAATCTACCCTGCAGCTAGCTaGTGCAGACATACAACCATCTCTTCCACTTACCCCCTGGACCCT | + |
|
Preference number: 1 (lower is better) Translates to: SAQRVCSPKIYPAAS*CRHTTISSTYPLDP Trigger: AGGGTCCAGGGGGTAAGTGGAAGAGATGGTTGTATGTCTGCAGCAGCTAGCTGCAGGGTAGATTTTGGGAGAACATACTCTCTGAGCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR CCA 90 bp | AACTTCCCTCAGGCCTCAGGATTCACAGTTCATTTAGTGTACTTGTaGCAGATGCAGGGTCGCTCAGCCTCCAAAGACACTCAGGATGAG | + |
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Preference number: 1 (lower is better) Translates to: NFPQASGFTVHLVYL*QMQGRSASKDTQDE Trigger: CTCATCCTGAGTGTCTTTGGAGGCTGAGCGACCCTGCATCTGCCACAAGTACACTAAATGAACTGTGAATCCTGAGGCCTGAGGGAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR CCA 90 bp | TTACTGTTCGATGTCTCCATTGCCTCACCCTCTTGCCTGTCTCATTaGCAGAGGGAGGCTGTGTTTAGCTACCAGGTACAGTGCAGTGAT | + |
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Preference number: 1 (lower is better) Translates to: LLFDVSIASPSCLSH*QREAVFSYQVQCSD Trigger: ATCACTGCACTGTACCTGGTAGCTAAACACAGCCTCCCTCTGCCAATGAGACAGGCAAGAGGGTGAGGCAATGGAGACATCGAACAGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR CCA 90 bp | ACAAAGATGCAGGGGGAAAGATTCCATGCCACCTGTCATCTTCATTaGAAGAGGCACAAAGGATCGCTGTTCCCTTTTTACCGTGTTGCC | + |
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Preference number: 1 (lower is better) Translates to: TKMQGERFHATCHLH*KRHKGSLFPFYRVA Trigger: GGCAACACGGTAAAAAGGGAACAGCGATCCTTTGTGCCTCTTCCAATGAAGATGACAGGTGGCATGGAATCTTTCCCCCTGCATCTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR GCA 90 bp | CTATTTCCAATTTGTCCTCATTTGGGACACAGGTGCACTGTTTATTaGCATGACACCCTCTTTAGAGTCCCAGTGGGATGCCAAAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: LFPICPHLGHRCTVY*HDTLFRVPVGCQKE Trigger: TTCTTTTTGGCATCCCACTGGGACTCTAAAGAGGGTGTCATGGCAATAAACAGTGCACCTGTGTCCCAAATGAGGACAAATTGGAAATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR CCA 90 bp | TTTGCATTTTTGACCCAAATTACCTATTTCCAATTTGTCCTCATTTaGGACACAGGTGCACTGTTTATTGCCATGACACCCTCTTTAGAG | + |
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Preference number: 1 (lower is better) Translates to: FAFLTQITYFQFVLI*DTGALFIAMTPSLE Trigger: CTCTAAAGAGGGTGTCATGGCAATAAACAGTGCACCTGTGTCCCAAATGAGGACAAATTGGAAATAGGTAATTTGGGTCAAAAATGCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR CAA 90 bp | GCTTCCAGGCAGGCCTGGAACCTCCTCCGGGGTCCTTGTACCTCCTaGGGTCCTGCTGACAAGGCCACTGGGCTCACAGACCAAAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: ASRQAWNLLRGPCTS*GPADKATGLTDQRV Trigger: GACCCTTTGGTCTGTGAGCCCAGTGGCCTTGTCAGCAGGACCCAAGGAGGTACAAGGACCCCGGAGGAGGTTCCAGGCCTGCCTGGAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGTCCCCTGGGCTCGTAGGCCCTCTGAACATTGACTCTCCCGGCACCCAGGGACATTCAGCCCTTTaGGCAACACAGGGAGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: FLSPGLVGPLNIDSPGTQGHSAL*ATQGGG Trigger: GCCACCTCCCTGTGTTGCCCAAAGGGCTGAATGTCC...CTGGGTGCCGGGAGAGTCAATGTTCAGAGGGCCTACGAGCCCAGGGGACAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGTCCCCTGGGCTCGTAGGCCCTCTGAACATTGACTCTCCCGGCACCCAGGGGCCTGGTTGGTCTTaGAGGGAGAACTTCCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: FLSPGLVGPLNIDSPGTQGPGWS*RENFPQ Trigger: CTGAGGGAAGTTCTCCCTCCAAGACCAACCAGGCCC...CTGGGTGCCGGGAGAGTCAATGTTCAGAGGGCCTACGAGCCCAGGGGACAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGGTGGGACAGGGCCTGGTTGGTCTTGGAGGGAGAACTTCCCTCAGGCCTCAGTCTCTGCACCCTGTTaGGAGCATGTCAGCTACTCT | + |
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Preference number: 2 (lower is better) Translates to: LGGTGPGWSWRENFPQASVSAPC*EHVSYS Trigger: AGAGTAGCTGACATGCTCCCAACAGGGTGCAGAGAC...TGAGGCCTGAGGGAAGTTCTCCCTCCAAGACCAACCAGGCCCTGTCCCACCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGTCCCCTGGGCTCGTAGGCCCTCTGAACATTGACTCTCCCGGCACCCAGCATCGAGACCTCTGCTaGCCTCTGTCCTTCTACAGA | + |
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Preference number: 2 (lower is better) Translates to: FLSPGLVGPLNIDSPGTQHRDLC*PLSFYR Trigger: TCTGTAGAAGGACAGAGGCCAGCAGAGGTCTCGATG...CTGGGTGCCGGGAGAGTCAATGTTCAGAGGGCCTACGAGCCCAGGGGACAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGCTATAGGAGAGGACATCTTAAGTGGCTATCAGGACAGAGGCTGGAGGGCGATGGTGAAGAGACCCTaGGCCTCCTGTCTCTGCACC | + |
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Preference number: 2 (lower is better) Translates to: RAIGEDILSGYQDRGWRAMVKRP*ASCLCT Trigger: GGTGCAGAGACAGGAGGCTCAGGGTCTCTTCACCAT...CGCCCTCCAGCCTCTGTCCTGATAGCCACTTAAGATGTCCTCTCCTATAGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR CAA 90 bp | GGTCCTGCTGACAAGGCCACTGGGCTCACAGACCAAAGGGTCTGTTaGTTCGATGAGTCCTCTTCGTTTGTCAGTTCCCCACCCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: GPADKATGLTDQRVC*FDESSSFVSSPPFS Trigger: GGAGAAGGGTGGGGAACTGACAAACGAAGAGGACTCATCGAACAAACAGACCCTTTGGTCTGTGAGCCCAGTGGCCTTGTCAGCAGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR-3UTR GCA 90 bp | CGAGACCTCTGCTGGCCTCTGTCCTTCTACAGAGCCCAGGCCTATGGTGAAGAGACATCTCCTCAAGCATaGGGACATTCAGCCCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: RDLCWPLSFYRAQAYGEETSPQA*GHSALW Trigger: CCAAAGGGCTGAATGTCCGCATGCTTGAGGAGATGT...CTCTTCACCATAGGCCTGGGCTCTGTAGAAGGACAGAGGCCAGCAGAGGTCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR-3UTR GCA 90 bp | GCCACCCTGCGACCATGTGACATGCCAGGTAATCTCTCTGCCTCCTTAGGAAGTGGGATGAGATGTCCTTaGCCCAAGTGGCAGAAAGCG | + |
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Preference number: 2 (lower is better) Translates to: ATLRPCDMPGNLSASLGSGMRCP*PKWQKA Trigger: CGCTTTCTGCCACTTGGGGCAAGGACATCTCATCCC...ACTTCCTAAGGAGGCAGAGAGATTACCTGGCATGTCACATGGTCGCAGGGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR CAA 90 bp | GTCCCTAGGATGTCTTGGCACACTGGTTACTGTTCGATGTCTCCATaGCCTCACCCTCTTGCCTGTCTCATTGGCAGAGGGAGGCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: VPRMSWHTGYCSMSP*PHPLACLIGRGRLC Trigger: ACACAGCCTCCCTCTGCCAATGAGACAGGCAAGAGGGTGAGGCAATGGAGACATCGAACAGTAACCAGTGTGCCAAGACATCCTAGGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCTAGCTGCTGCAGACATACAACCATCTCTTCCACTTACCCCCTGGACCCTTAGTCCTGGCAGCTGGTaGAGAGGAGAAAGACCAGAG | + |
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Preference number: 2 (lower is better) Translates to: QLAAADIQPSLPLTPWTLSPGSW*RGERPE Trigger: CTCTGGTCTTTCTCCTCTTCACCAGCTGCCAGGACT...AAGGGTCCAGGGGGTAAGTGGAAGAGATGGTTGTATGTCTGCAGCAGCTAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGCTATAGGAGAGGACATCTTAAGTGGCTATCAGGACAGAGGCTGGAGGGCGGTCCCTAGGATGTCTTaGCACACTGGTTACTGTTCG | + |
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Preference number: 2 (lower is better) Translates to: RAIGEDILSGYQDRGWRAVPRMS*HTGYCS Trigger: CGAACAGTAACCAGTGTGCCAAGACATCCTAGGGAC...CGCCCTCCAGCCTCTGTCCTGATAGCCACTTAAGATGTCCTCTCCTATAGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR-3UTR TCA 90 bp | GGTCATGGGTGGGAGGCTAAGGGTCAAGAGAGAGAGCAGGTGACAGAACCCAAGCAAAGACACTCAGGATaGGAGCTTTCAAGAACATCG | + |
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Preference number: 2 (lower is better) Translates to: GHGWEAKGQEREQVTEPKQRHSG*ELSRTS Trigger: CGATGTTCTTGAAAGCTCTCATCCTGAGTGTCTTTG...CTTGGGTTCTGTCACCTGCTCTCTCTCTTGACCCTTAGCCTCCCACCCATGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAGAGGCACAAAGGATCGCTGTTCCCTTTTTACCGTGTTGCCCACTGATAACGGTCATGGGAAGTGGTaGTGCCTCATGTCCCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: GRGTKDRCSLFTVLPTDNGHGKW*CLMSLG Trigger: TCCTAGGGACATGAGGCATCACCACTTCCCATGACC...GTTATCAGTGGGCAACACGGTAAAAAGGGAACAGCGATCCTTTGTGCCTCTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCTCCATGTACCCTCAAGGCGGGGCTCACGGGCTCTGTTTGTCTTTTTAGCTATTGCCTCACCCTCTTaGCTGTCTCATTGGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: FLHVPSRRGSRALFVFLAIASPS*LSHWQR Trigger: CCTCTGCCAATGAGACAGGCAAGAGGGTGAGGCAAT...AGCTAAAAAGACAAACAGAGCCCGTGAGCCCCGCCTTGAGGGTACATGGAGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR-3UTR CCA 90 bp | ATTCCATGCCACCTGTCATCTTCATTGGAAGAGGCACAAAGGATCGCTGTTCCCATTAAGGACTCAGTGTaGGCAGGGACAGAGGGCCAC | + |
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Preference number: 2 (lower is better) Translates to: IPCHLSSSLEEAQRIAVPIKDSV*AGTEGH Trigger: GTGGCCCTCTGTCCCTGCCCACACTGAGTCCTTAAT...GGGAACAGCGATCCTTTGTGCCTCTTCCAATGAAGATGACAGGTGGCATGGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR CAA 90 bp | GAGAACTTCCCTCAGGCCTCAGGATTCACAGTTCATTTAGTGTACTaGTGGCAGATGCAGGGTCGCTCAGCCTCCAAAGACACTCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: ENFPQASGFTVHLVY*WQMQGRSASKDTQD Trigger: ATCCTGAGTGTCTTTGGAGGCTGAGCGACCCTGCATCTGCCACAAGTACACTAAATGAACTGTGAATCCTGAGGCCTGAGGGAAGTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR-3UTR TCA 90 bp | TTACCGTGTTGCCCACTGATAACTTCCCTTAAAAAGGCAATACTTCCAAAATACCAGGGAGGTGGCAGCTaGGGGGTGCTACAGTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LPCCPLITSLKKAILPKYQGGGS*GVLQWW Trigger: CCACCACTGTAGCACCCCTCAGCTGCCACCTCCCTG...GTATTTTGGAAGTATTGCCTTTTTAAGGGAAGTTATCAGTGGGCAACACGGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR-3UTR GCA 90 bp | ATTCCATGCCACCTGTCATCTTCATTGGAAGAGGCACAAAGGATCGCTGTTCCCTGCGACCATGTGACATaGCAGGTAATCTCTCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: IPCHLSSSLEEAQRIAVPCDHVT*QVISLP Trigger: AGGCAGAGAGATTACCTGGCATGTCACATGGTCGCA...GGGAACAGCGATCCTTTGTGCCTCTTCCAATGAAGATGACAGGTGGCATGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| 3UTR CAA 90 bp | CACAAAGATGCAGGGGGAAAGATTCCATGCCACCTGTCATCTTCATaGGAAGAGGCACAAAGGATCGCTGTTCCCTTTTTACCGTGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: HKDAGGKIPCHLSSS*EEAQRIAVPFLPCC Trigger: GCAACACGGTAAAAAGGGAACAGCGATCCTTTGTGCCTCTTCCAATGAAGATGACAGGTGGCATGGAATCTTTCCCCCTGCATCTTTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTCTCCATGTACCCTCAAGGCGGGGCTCACGGGCTCTGTTTGTCTTTTTAGCTCGCTTTCAAAAGCACTaGCATTTAAACGCATGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: FLHVPSRRGSRALFVFLARFQKH*HLNACL Trigger: AAGGCATGCGTTTAAATGTCAGTGCTTTTGAAAGCG...AGCTAAAAAGACAAACAGAGCCCGTGAGCCCCGCCTTGAGGGTACATGGAGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTAGCTGCTGCAGACATACAACCATCTCTTCCACTTACCCCCTGGACCCTTAAAACAAAAGGCAACTaGGCACCATATGTAAACACT | + |
|
Preference number: 2 (lower is better) Translates to: QLAAADIQPSLPLTPWTLKTKGN*APYVNT Trigger: AGTGTTTACATATGGTGCCCAGTTGCCTTTTGTTTT...AAGGGTCCAGGGGGTAAGTGGAAGAGATGGTTGTATGTCTGCAGCAGCTAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAAGAGGCACAAAGGATCGCTGTTCCCTTTTTACCGTGTTGCCCACTGATAACCATAGAAGCATAGTATaGGTCAAGAAAGTCAGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: GRGTKDRCSLFTVLPTDNHRSIV*VKKVSP Trigger: AGGACTGACTTTCTTGACTCATACTATGCTTCTATG...GTTATCAGTGGGCAACACGGTAAAAAGGGAACAGCGATCCTTTGTGCCTCTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTTGTCCTCATTTGGGACACAGGTGCACTGTTTATTGCCATGACACCCTCTTTCATTTAGTGTACTTGTaGCAGATGCAGGGTCGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: ICPHLGHRCTVYCHDTLFHLVYL*QMQGRS Trigger: TGAGCGACCCTGCATCTGCCACAAGTACACTAAATG...AAAGAGGGTGTCATGGCAATAAACAGTGCACCTGTGTCCCAAATGAGGACAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTCCATGCCACCTGTCATCTTCATTGGAAGAGGCACAAAGGATCGCTGTTCCCAGATCAGGAATGACTTaGGACTTTCTAGAGTGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: IPCHLSSSLEEAQRIAVPRSGMT*DFLEWF Trigger: AAACCACTCTAGAAAGTCCCAAGTCATTCCTGATCT...GGGAACAGCGATCCTTTGTGCCTCTTCCAATGAAGATGACAGGTGGCATGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTACCAAGTTCCATGTCCAAAGAAAAACTGGTAACCATGCAGAAATTTTAACATGTCCTTGCCCCAAGTaGCAGAAAGCGGCTCCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: ATKFHVQRKTGNHAEILTCPCPK*QKAAPD Trigger: GTCTGGAGCCGCTTTCTGCCACTTGGGGCAAGGACA...TGTTAAAATTTCTGCATGGTTACCAGTTTTTCTTTGGACATGGAACTTGGTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTACCAAGTTCCATGTCCAAAGAAAAACTGGTAACCATGCAGAAATTTTAACAAGGCTTGCCCAGTGTTaGGGGGCTGAGGAGAAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: ATKFHVQRKTGNHAEILTRLAQC*GAEEKE Trigger: CTCTTTCTCCTCAGCCCCCCAACACTGGGCAAGCCT...TGTTAAAATTTCTGCATGGTTACCAGTTTTTCTTTGGACATGGAACTTGGTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTACCAAGTTCCATGTCCAAAGAAAAACTGGTAACCATGCAGAAATTTTAACATCATACGAGGCAAGCTaGAAGGTGCTGGGTGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: ATKFHVQRKTGNHAEILTSYEAS*KVLGGT Trigger: TGTCCCACCCAGCACCTTGCAGCTTGCCTCGTATGA...TGTTAAAATTTCTGCATGGTTACCAGTTTTTCTTTGGACATGGAACTTGGTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCCCACTGATAACTTCCCTTAAAAAGGCAATACTTCCAAAATACACAAATGTAGCCTACAGGACAGTCTaGGGGAGGTCATGGGAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: CPLITSLKKAILPKYTNVAYRTV*GRSWEV Trigger: CACTTCCCATGACCTCCCCCAGACTGTCCTGTAGGC...TACATTTGTGTATTTTGGAAGTATTGCCTTTTTAAGGGAAGTTATCAGTGGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCCCACTGATAACTTCCCTTAAAAAGGCAATACTTCCAAAATACACAAATGTAAGACTGGAGAGTCCTTaGTGCTGGATGCTCACCGTC | + |
|
Preference number: 2 (lower is better) Translates to: CPLITSLKKAILPKYTNVRLESP*CWMLTV Trigger: GACGGTGAGCATCCAGCACCAAGGACTCTCCAGTCT...TACATTTGTGTATTTTGGAAGTATTGCCTTTTTAAGGGAAGTTATCAGTGGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTACCAAGTTCCATGTCCAAAGAAAAACTGGTAACCATGCAGAAATTTTAACATACCCCCTGGACCCTTaGTTAACACTTCACGTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: ATKFHVQRKTGNHAEILTYPLDP*LTLHVS Trigger: ACTGACGTGAAGTGTTAAGCAAGGGTCCAGGGGGTA...TGTTAAAATTTCTGCATGGTTACCAGTTTTTCTTTGGACATGGAACTTGGTAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTACCAAGTTCCATGTCCAAAGAAAAACTGGTAACCATGCAGAAATTTTAACACCTGCAGCTAGCTGCTaGAGACATACAACCATCTCT | + |
|
Preference number: 2 (lower is better) Translates to: ATKFHVQRKTGNHAEILTPAASC*RHTTIS Trigger: AGAGATGGTTGTATGTCTGCAGCAGCTAGCTGCAGG...TGTTAAAATTTCTGCATGGTTACCAGTTTTTCTTTGGACATGGAACTTGGTAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTACCAAGTTCCATGTCCAAAGAAAAACTGGTAACCATGCAGAAATTTTAACAAGCGATTGTCCCTTTTaGGTGTATTACAACCACACG | + |
|
Preference number: 2 (lower is better) Translates to: ATKFHVQRKTGNHAEILTSDCPF*VYYNHT Trigger: CGTGTGGTTGTAATACACTCAAAAGGGACAATCGCT...TGTTAAAATTTCTGCATGGTTACCAGTTTTTCTTTGGACATGGAACTTGGTAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR-3UTR CCA 90 bp | TTACCGTGTTGCCCACTGATAACTTCCCTTAAAAAGGCAATACTTCCAAAATACCAATTTGTCCTCATTTaGGACACAGGTGCACTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LPCCPLITSLKKAILPKYQFVLI*DTGALF Trigger: AAACAGTGCACCTGTGTCCCAAATGAGGACAAATTG...GTATTTTGGAAGTATTGCCTTTTTAAGGGAAGTTATCAGTGGGCAACACGGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR CCA 72 bp | CGAGGCAAGCTGCAAGGTGCTGGGTGGGACAGGGCCTaGTTGGTCTTGGAGGGAGAACTTCCCTCAGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RGKLQGAGWDRA*LVLEGELPSGL Trigger: GAGGCCTGAGGGAAGTTCTCCCTCCAAGACCAACCAGGCCCTGTCCCACCCAGCACCTTGCAGCTTGCCTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR CCA 72 bp | AGGCCTGGAACCTCCTCCGGGGTCCTTGTACCTCCTTaGGTCCTGCTGACAAGGCCACTGGGCTCACAGACC | + |
|
Preference number: 3 (lower is better) Translates to: RPGTSSGVLVPP*VLLTRPLGSQT Trigger: GGTCTGTGAGCCCAGTGGCCTTGTCAGCAGGACCCAAGGAGGTACAAGGACCCCGGAGGAGGTTCCAGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR TCA 72 bp | CCTCCTCCGGGGTCCTTGTACCTCCTTGGGTCCTGCTaGCAAGGCCACTGGGCTCACAGACCAAAGGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PPPGSLYLLGSC*QGHWAHRPKGL Trigger: CAGACCCTTTGGTCTGTGAGCCCAGTGGCCTTGTCAGCAGGACCCAAGGAGGTACAAGGACCCCGGAGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR GCA 72 bp | AGACTGGAGAGTCCTTGGTGCTGGATGCTCACCGTCTaGAGCCCAGCATGCTACCACTCGAGGGCAGCACGG | + |
|
Preference number: 3 (lower is better) Translates to: RLESPWCWMLTV*SPACYHSRAAR Trigger: CCGTGCTGCCCTCGAGTGGTAGCATGCTGGGCTGCAGACGGTGAGCATCCAGCACCAAGGACTCTCCAGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR GCA 72 bp | CCTTGGTGCTGGATGCTCACCGTCTGCAGCCCAGCATaGTACCACTCGAGGGCAGCACGGTGGCAGCTAATA | + |
|
Preference number: 3 (lower is better) Translates to: PWCWMLTVCSPA*YHSRAARWQLI Trigger: TATTAGCTGCCACCGTGCTGCCCTCGAGTGGTAGCATGCTGGGCTGCAGACGGTGAGCATCCAGCACCAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR CCA 72 bp | GGCAGCCTTAGTGCAGCAGCAAGACTGGAGAGTCCTTaGTGCTGGATGCTCACCGTCTGCAGCCCAGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: GSLSAAARLESP*CWMLTVCSPAC Trigger: GCATGCTGGGCTGCAGACGGTGAGCATCCAGCACCAAGGACTCTCCAGTCTTGCTGCTGCACTAAGGCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR CCA 72 bp | TGCAAGGTGCTGGGTGGGACAGGGCCTGGTTGGTCTTaGAGGGAGAACTTCCCTCAGGCCTCAGGATTCACA | + |
|
Preference number: 3 (lower is better) Translates to: CKVLGGTGPGWS*RENFPQASGFT Trigger: TGTGAATCCTGAGGCCTGAGGGAAGTTCTCCCTCCAAGACCAACCAGGCCCTGTCCCACCCAGCACCTTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR CCA 72 bp | CCCCTCCTTCATGCCAGAACAGTCTTACGGCTTTTGTaGGGTGGCATCCCGGTCATGGGTGGGAGGCTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PLLHARTVLRLL*GGIPVMGGRLR Trigger: CCTTAGCCTCCCACCCATGACCGGGATGCCACCCCACAAAAGCCGTAAGACTGTTCTGGCATGAAGGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR TCA 72 bp | ATGGGTGGGAGGCTAAGGGTCAAGAGAGAGAGCAGGTaGCAGAACCCAAGCCTACAGGACAGTCTGGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: MGGRLRVKRESR*QNPSLQDSLGE Trigger: CTCCCCCAGACTGTCCTGTAGGCTTGGGTTCTGTCACCTGCTCTCTCTCTTGACCCTTAGCCTCCCACCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR CCA 72 bp | CTTACGGCTTTTGTGGGGTGGCATCCCGGTCATGGGTaGGAGGCTAAGGGTCAAGAGAGAGAGCAGGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: LTAFVGWHPGHG*EAKGQEREQVT Trigger: TGTCACCTGCTCTCTCTCTTGACCCTTAGCCTCCCACCCATGACCGGGATGCCACCCCACAAAAGCCGTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTCATGGGTGGGAGGCTAAGGGTCAAGAGAGAGAGCAGGTGACAGAACCCAAGCTCTTGCCTGTCTCATaGGCAGAGGGAGGCTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: GHGWEAKGQEREQVTEPKLLPVS*AEGGCV Trigger: AACACAGCCTCCCTCTGCCAATGAGACAGGCAAGAG...CTTGGGTTCTGTCACCTGCTCTCTCTCTTGACCCTTAGCCTCCCACCCATGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR TCA 72 bp | CCTACAGGACAGTCTGGGGGAGGTCATGGGAAGTGGTaGTGCCTCATGTCCCTAGGATGTCTTGGCACACTG | + |
|
Preference number: 3 (lower is better) Translates to: PTGQSGGGHGKW*CLMSLGCLGTL Trigger: CAGTGTGCCAAGACATCCTAGGGACATGAGGCATCACCACTTCCCATGACCTCCCCCAGACTGTCCTGTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR CCA 72 bp | AGTGATGTCAGGGCTGGTGAGATTAAGGACTCAGTGTaGGCAGGGACAGAGGGCCACTCCTCAGTAGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SDVRAGEIKDSV*AGTEGHSSVAA Trigger: AGCAGCTACTGAGGAGTGGCCCTCTGTCCCTGCCCACACTGAGTCCTTAATCTCACCAGCCCTGACATCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR CCA 72 bp | AGAGCAGGTGACAGAACCCAAGCCTACAGGACAGTCTaGGGGAGGTCATGGGAAGTGGTGATGCCTCATGTC | + |
|
Preference number: 3 (lower is better) Translates to: RAGDRTQAYRTV*GRSWEVVMPHV Trigger: GACATGAGGCATCACCACTTCCCATGACCTCCCCCAGACTGTCCTGTAGGCTTGGGTTCTGTCACCTGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR CCA 72 bp | TCAGGTAAGGAGGGCTATAGGAGAGGACATCTTAAGTaGCTATCAGGACAGAGGCTGGAGGGCGGGGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: SGKEGYRRGHLK*LSGQRLEGGAP Trigger: AGGTGCCCCGCCCTCCAGCCTCTGTCCTGATAGCCACTTAAGATGTCCTCTCCTATAGCCCTCCTTACCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR TCA 72 bp | GATGCAGGGTCGCTCAGCCTCCAAAGACACTCAGGATaGGAGCTTTCAAGAACATCGAGACCTCTGCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: DAGSLSLQRHSG*ELSRTSRPLLA Trigger: GGCCAGCAGAGGTCTCGATGTTCTTGAAAGCTCTCATCCTGAGTGTCTTTGGAGGCTGAGCGACCCTGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR CCA 72 bp | AGAACCCAAGCCTACAGGACAGTCTGGGGGAGGTCATaGGAAGTGGTGATGCCTCATGTCCCTAGGATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: RTQAYRTVWGRS*EVVMPHVPRMS Trigger: AGACATCCTAGGGACATGAGGCATCACCACTTCCCATGACCTCCCCCAGACTGTCCTGTAGGCTTGGGTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTCCATGTACCCTCAAGGCGGGGCTCACGGGCTCTGTTTGTCTTTTTAGCTACAGGGCTGCAGGAGTaGGTACAGGGAAGTTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: FLHVPSRRGSRALFVFLATGLQE*VQGSWP Trigger: TGGCCAACTTCCCTGTACCAACTCCTGCAGCCCTGT...AGCTAAAAAGACAAACAGAGCCCGTGAGCCCCGCCTTGAGGGTACATGGAGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR TCA 72 bp | GGCCCTCTGAACATTGACTCTCCCGGCACCCAGCCTTaGCAGTGGCATCTTTTGCTAGCTTCAGGAAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: GPLNIDSPGTQP*QWHLLLASGRS Trigger: TGATCTTCCTGAAGCTAGCAAAAGATGCCACTGTCAAGGCTGGGTGCCGGGAGAGTCAATGTTCAGAGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR GCA 72 bp | ACAGATACAGACACAGACAGGGTCACCACACAGGGCTaGAGGAGTTGGTACAGGGAAGTTGGCCATGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TDTDTDRVTTQG*RSWYREVGHEA Trigger: TGCTTCATGGCCAACTTCCCTGTACCAACTCCTGCAGCCCTGTGTGGTGACCCTGTCTGTGTCTGTATCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR CCA 72 bp | CAGGATGAGAGCTTTCAAGAACATCGAGACCTCTGCTaGCCTCTGTCCTTCTACAGAGCCCAGGCCTATGGT | + |
|
Preference number: 3 (lower is better) Translates to: QDESFQEHRDLC*PLSFYRAQAYG Trigger: ACCATAGGCCTGGGCTCTGTAGAAGGACAGAGGCCAGCAGAGGTCTCGATGTTCTTGAAAGCTCTCATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR CCA 72 bp | GATGTCTCCATTGCCTCACCCTCTTGCCTGTCTCATTaGCAGAGGGAGGCTGTGTTTAGCTACCAGGTACAG | + |
|
Preference number: 3 (lower is better) Translates to: DVSIASPSCLSH*QREAVFSYQVQ Trigger: CTGTACCTGGTAGCTAAACACAGCCTCCCTCTGCCAATGAGACAGGCAAGAGGGTGAGGCAATGGAGACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR CCA 72 bp | AGAGGAGGAGGGGTCCTCTTTCGTCTTCTCAGGGGATaGGGACATCAATCAGGTAAGGAGGGCTATAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RGGGVLFRLLRG*GHQSGKEGYRR Trigger: TCTCCTATAGCCCTCCTTACCTGATTGATGTCCCCATCCCCTGAGAAGACGAAAGAGGACCCCTCCTCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR GCA 72 bp | ACTCAGGATGAGAGCTTTCAAGAACATCGAGACCTCTaGTGGCCTCTGTCCTTCTACAGAGCCCAGGCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: TQDESFQEHRDL*WPLSFYRAQAY Trigger: ATAGGCCTGGGCTCTGTAGAAGGACAGAGGCCAGCAGAGGTCTCGATGTTCTTGAAAGCTCTCATCCTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR GCA 72 bp | TGGTTACTGTTCGATGTCTCCATTGCCTCACCCTCTTaGCTGTCTCATTGGCAGAGGGAGGCTGTGTTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: WLLFDVSIASPS*LSHWQREAVFS Trigger: GCTAAACACAGCCTCCCTCTGCCAATGAGACAGGCAAGAGGGTGAGGCAATGGAGACATCGAACAGTAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR GCA 72 bp | TGTCTTGGCACACTGGTTACTGTTCGATGTCTCCATTaGCTCACCCTCTTGCCTGTCTCATTGGCAGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: CLGTLVTVRCLH*LTLLPVSLAEG Trigger: TCCCTCTGCCAATGAGACAGGCAAGAGGGTGAGGCAATGGAGACATCGAACAGTAACCAGTGTGCCAAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGAGGCACAAAGGATCGCTGTTCCCTTTTTACCGTGTTGCCCACTGATAACAAGACTGGAGAGTCCTaGGTGCTGGATGCTCACCGT | + |
|
Preference number: 3 (lower is better) Translates to: GRGTKDRCSLFTVLPTDNKTGES*VLDAHR Trigger: ACGGTGAGCATCCAGCACCAAGGACTCTCCAGTCTT...GTTATCAGTGGGCAACACGGTAAAAAGGGAACAGCGATCCTTTGTGCCTCTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGTCCTCATTTGGGACACAGGTGCACTGTTTATTGCCATGACACCCTCTTTAGGGCCTGGTTGGTCTaGGAGGGAGAACTTCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: ICPHLGHRCTVYCHDTLFRAWLV*EGELPS Trigger: TGAGGGAAGTTCTCCCTCCAAGACCAACCAGGCCCT...AAAGAGGGTGTCATGGCAATAAACAGTGCACCTGTGTCCCAAATGAGGACAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR GCA 72 bp | GTATGTTCTCCCAAAATCTACCCTGCAGCTAGCTGCTaGAGACATACAACCATCTCTTCCACTTACCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VCSPKIYPAASC*RHTTISSTYPL Trigger: CAGGGGGTAAGTGGAAGAGATGGTTGTATGTCTGCAGCAGCTAGCTGCAGGGTAGATTTTGGGAGAACATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR TCA 72 bp | AGGCTGATAGCTCACCTTCTACTGGCCCTGGCTTTCTaGAAACTGTCGCTAGCTCTTTGCATTTTTGACCCA | + |
|
Preference number: 3 (lower is better) Translates to: RLIAHLLLALAF*KLSLALCIFDP Trigger: TGGGTCAAAAATGCAAAGAGCTAGCGACAGTTTTCAGAAAGCCAGGGCCAGTAGAAGGTGAGCTATCAGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR TCA 72 bp | TCACTAGATCTACCGACTGCAAGCGATTGTCCCTTTTaGGTGTATTACAACCACACGCTTTCCTGTCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLDLPTASDCPF*VYYNHTLSCPL Trigger: CAGGGGACAGGAAAGCGTGTGGTTGTAATACACTCAAAAGGGACAATCGCTTGCAGTCGGTAGATCTAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR GCA 72 bp | AGAGTATGTTCTCCCAAAATCTACCCTGCAGCTAGCTaGTGCAGACATACAACCATCTCTTCCACTTACCCC | + |
|
Preference number: 3 (lower is better) Translates to: RVCSPKIYPAAS*CRHTTISSTYP Trigger: GGGGTAAGTGGAAGAGATGGTTGTATGTCTGCAGCAGCTAGCTGCAGGGTAGATTTTGGGAGAACATACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR GCA 72 bp | ATTTGTCCTCATTTGGGACACAGGTGCACTGTTTATTaGCATGACACCCTCTTTAGAGTCCCAGTGGGATGC | + |
|
Preference number: 3 (lower is better) Translates to: ICPHLGHRCTVY*HDTLFRVPVGC Trigger: GCATCCCACTGGGACTCTAAAGAGGGTGTCATGGCAATAAACAGTGCACCTGTGTCCCAAATGAGGACAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTCCATGTACCCTCAAGGCGGGGCTCACGGGCTCTGTTTGTCTTTTTAGCTCCACAGATAATACCTTaGTTAAGTGCTCAGAGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: FLHVPSRRGSRALFVFLAPQIIP*LSAQRV Trigger: TACTCTCTGAGCACTTAACAAAGGTATTATCTGTGG...AGCTAAAAAGACAAACAGAGCCCGTGAGCCCCGCCTTGAGGGTACATGGAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR CCA 72 bp | GTGACTGTCCACTGTGGCTACAGATCAGGAATGACTTaGGACTTTCTAGAGTGGTTTTTCATACGAGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: VTVHCGYRSGMT*DFLEWFFIRGK Trigger: CTTGCCTCGTATGAAAAACCACTCTAGAAAGTCCCAAGTCATTCCTGATCTGTAGCCACAGTGGACAGTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR GCA 72 bp | GAGGCACAAAGGATCGCTGTTCCCTTTTTACCGTGTTaGCCACTGATAACTTCCCTTAAAAAGGCAATACTT | + |
|
Preference number: 3 (lower is better) Translates to: EAQRIAVPFLPC*PLITSLKKAIL Trigger: AAGTATTGCCTTTTTAAGGGAAGTTATCAGTGGGCAACACGGTAAAAAGGGAACAGCGATCCTTTGTGCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTACCAAGTTCCATGTCCAAAGAAAAACTGGTAACCATGCAGAAATTTTAACATTACCCCCTGGACCCTaGCTTAACACTTCACGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: ATKFHVQRKTGNHAEILTLPPGP*LNTSRQ Trigger: CTGACGTGAAGTGTTAAGCAAGGGTCCAGGGGGTAA...TGTTAAAATTTCTGCATGGTTACCAGTTTTTCTTTGGACATGGAACTTGGTAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR GCA 72 bp | TACCTATTTCCAATTTGTCCTCATTTGGGACACAGGTaGACTGTTTATTGCCATGACACCCTCTTTAGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: YLFPICPHLGHR*TVYCHDTLFRV Trigger: GACTCTAAAGAGGGTGTCATGGCAATAAACAGTGCACCTGTGTCCCAAATGAGGACAAATTGGAAATAGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR CCA 72 bp | TTGACCCAAATTACCTATTTCCAATTTGTCCTCATTTaGGACACAGGTGCACTGTTTATTGCCATGACACCC | + |
|
Preference number: 3 (lower is better) Translates to: LTQITYFQFVLI*DTGALFIAMTP Trigger: GGGTGTCATGGCAATAAACAGTGCACCTGTGTCCCAAATGAGGACAAATTGGAAATAGGTAATTTGGGTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCACTGATAACTTCCCTTAAAAAGGCAATACTTCCAAAATACACAAATGTATGTTCGATGTCTCCATaGCCTCACCCTCTTGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: CPLITSLKKAILPKYTNVCSMSP*PHPLAC Trigger: ACAGGCAAGAGGGTGAGGCAATGGAGACATCGAACA...TACATTTGTGTATTTTGGAAGTATTGCCTTTTTAAGGGAAGTTATCAGTGGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGCTTGTCACAGGGTAGGGGGCACACTGCTGACCCTGGCCAGGACAACAGCAGGGGAGAACCCAGCTaGTCCGGGCGGCCCTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: CGLSQGRGHTADPGQDNSRGEPS*SGRPLP Trigger: CGGCAAGGGCCGCCCGGAGCAGCTGGGTTCTCCCCT...GCTGTTGTCCTGGCCAGGGTCAGCAGTGTGCCCCCTACCCTGTGACAAGCCACA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR CAA 72 bp | CAGGCCTGGAACCTCCTCCGGGGTCCTTGTACCTCCTaGGGTCCTGCTGACAAGGCCACTGGGCTCACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QAWNLLRGPCTS*GPADKATGLTD Trigger: GTCTGTGAGCCCAGTGGCCTTGTCAGCAGGACCCAAGGAGGTACAAGGACCCCGGAGGAGGTTCCAGGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGTGGGACAGGGCCTGGTTGGTCTTGGAGGGAGAACTTCCCTCAGGCCTCATGCGGGCCTCGGAGGTaGGCGTCAGGTCTGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LGGTGPGWSWRENFPQASCGPRR*ASGLRN Trigger: ATTTCTCAGACCTGACGCTCACCTCCGAGGCCCGCA...TGAGGCCTGAGGGAAGTTCTCCCTCCAAGACCAACCAGGCCCTGTCCCACCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTAGCTGCTGCAGACATACAACCATCTCTTCCACTTACCCCCTGGACCCTTGAGGAGGCCGCTTGCTaGGCTTGCGGGCCTCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLAAADIQPSLPLTPWTLEEAAC*ACGPRR Trigger: CCTCCGAGGCCCGCAAGCCCAGCAAGCGGCCTCCTC...AAGGGTCCAGGGGGTAAGTGGAAGAGATGGTTGTATGTCTGCAGCAGCTAGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR GCA 90 bp | CGAGACCTCTGCTGGCCTCTGTCCTTCTACAGAGCCCAGGCCTATGGTGAAGAGAGGGGTCTCTGCTTGTaGGGGTACACGTTGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RDLCWPLSFYRAQAYGEERGLCL*GYTLMW Trigger: CCACATCAACGTGTACCCGCACAAGCAGAGACCCCT...CTCTTCACCATAGGCCTGGGCTCTGTAGAAGGACAGAGGCCAGCAGAGGTCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR TCA 90 bp | TTTCAAGAACATCGAGACCTCTGCTGGCCTCTGTCCTTCTACAGAGCCCAGGCCTTTTCGCAGAGGTGCTaGGGGTGCTCCTTGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FQEHRDLCWPLSFYRAQAFSQRC*GCSLLW Trigger: CCAGAGCAAGGAGCACCCTCAGCACCTCTGCGAAAA...GGCCTGGGCTCTGTAGAAGGACAGAGGCCAGCAGAGGTCTCGATGTTCTTGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR GCA 90 bp | TACAGGACAGTCTGGGGGAGGTCATGGGAAGTGGTGATGCCTCATGTCCCTAGGCAAAGCAGCGCTTCTTaGCTTGGTACGGCGTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: YRTVWGRSWEVVMPHVPRQSSAS*LGTASD Trigger: GTCTGACGCCGTACCAAGGCAAGAAGCGCTGCTTTG...CCTAGGGACATGAGGCATCACCACTTCCCATGACCTCCCCCAGACTGTCCTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCTATAGGAGAGGACATCTTAAGTGGCTATCAGGACAGAGGCTGGAGGGCGACCCAGTTGAGTAGCTaGGCTGGCTGGTACACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RAIGEDILSGYQDRGWRATQLSS*AGWYTE Trigger: CTCGGTGTACCAGCCAGCCCAGCTACTCAACTGGGT...CGCCCTCCAGCCTCTGTCCTGATAGCCACTTAAGATGTCCTCTCCTATAGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR CCA 90 bp | GGTCATGGGTGGGAGGCTAAGGGTCAAGAGAGAGAGCAGGTGACAGAACCCAAGACTCCTGCCCCATGTTaGCCCAAGAGTTCCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: GHGWEAKGQEREQVTEPKTPAPC*PKSSHS Trigger: TGAGTGGGAACTCTTGGGCCAACATGGGGCAGGAGT...CTTGGGTTCTGTCACCTGCTCTCTCTCTTGACCCTTAGCCTCCCACCCATGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTAGCTGCTGCAGACATACAACCATCTCTTCCACTTACCCCCTGGACCCTTGGGTGCTCCTTGCTCTaGTCAGACACATCCAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QLAAADIQPSLPLTPWTLGCSLL*SDTSRP Trigger: CGGCCTGGATGTGTCTGACCAGAGCAAGGAGCACCC...AAGGGTCCAGGGGGTAAGTGGAAGAGATGGTTGTATGTCTGCAGCAGCTAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR TCA 90 bp | CAGCTAGCTGCTGCAGACATACAACCATCTCTTCCACTTACCCCCTGGACCCTTACAGGTAGACCCAGTTaGGTAGCTGGGCTGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QLAAADIQPSLPLTPWTLTGRPS*VAGLAG Trigger: ACCAGCCAGCCCAGCTACTCAACTGGGTCTACCTGT...AAGGGTCCAGGGGGTAAGTGGAAGAGATGGTTGTATGTCTGCAGCAGCTAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR TCA 90 bp | TACAGGACAGTCTGGGGGAGGTCATGGGAAGTGGTGATGCCTCATGTCCCTAGGCATCAGCGATGTTATTaGGGGAACCGTAGGGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YRTVWGRSWEVVMPHVPRHQRCY*GNRRAK Trigger: CTTCGCCCTACGGTTCCCTCAATAACATCGCTGATG...CCTAGGGACATGAGGCATCACCACTTCCCATGACCTCCCCCAGACTGTCCTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTCCATGTACCCTCAAGGCGGGGCTCACGGGCTCTGTTTGTCTTTTTAGCTAGCGCCTCTCCGCGCTaGAGCTGGAAGACGCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FLHVPSRRGSRALFVFLASASPR*SWKTLL Trigger: TAACAGCGTCTTCCAGCTGCAGCGCGGAGAGGCGCT...AGCTAAAAAGACAAACAGAGCCCGTGAGCCCCGCCTTGAGGGTACATGGAGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR GCA 90 bp | AGGGCTATAGGAGAGGACATCTTAAGTGGCTATCAGGACAGAGGCTGGAGGGCGCTCACCTTTGGGGCGTaGCTGAGGGCAGTCCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: RAIGEDILSGYQDRGWRALTFGA*LRAVLN Trigger: ATTAAGGACTGCCCTCAGGCACGCCCCAAAGGTGAG...CGCCCTCCAGCCTCTGTCCTGATAGCCACTTAAGATGTCCTCTCCTATAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTAGCTGCTGCAGACATACAACCATCTCTTCCACTTACCCCCTGGACCCTTGCTGAGGGTGCTCCTTaGTCTGGTCAGACACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLAAADIQPSLPLTPWTLAEGAP*SGQTHP Trigger: TGGATGTGTCTGACCAGAGCAAGGAGCACCCTCAGC...AAGGGTCCAGGGGGTAAGTGGAAGAGATGGTTGTATGTCTGCAGCAGCTAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR GCA 90 bp | GCCACCCTGCGACCATGTGACATGCCAGGTAATCTCTCTGCCTCCTTAGGAAGTAGTAGCCCAGGACCTTaGACTTTTCGCAGAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ATLRPCDMPGNLSASLGSSSPGP*TFRRGA Trigger: AGCACCTCTGCGAAAAGTGCAAGGTCCTGGGCTACT...ACTTCCTAAGGAGGCAGAGAGATTACCTGGCATGTCACATGGTCGCAGGGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR CAA 72 bp | CCTCAGGCCTCAGGATTCACAGTTCATTTAGTGTACTaGTGGCAGATGCAGGGTCGCTCAGCCTCCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PQASGFTVHLVY*WQMQGRSASKD Trigger: GTCTTTGGAGGCTGAGCGACCCTGCATCTGCCACAAGTACACTAAATGAACTGTGAATCCTGAGGCCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR CAA 72 bp | GACAAGGCCACTGGGCTCACAGACCAAAGGGTCTGTTaGTTCGATGAGTCCTCTTCGTTTGTCAGTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DKATGLTDQRVC*FDESSSFVSSP Trigger: TGGGGAACTGACAAACGAAGAGGACTCATCGAACAAACAGACCCTTTGGTCTGTGAGCCCAGTGGCCTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR GCA 90 bp | ATTCCATGCCACCTGTCATCTTCATTGGAAGAGGCACAAAGGATCGCTGTTCCCCACTTGATGCACTCCTaGCCCATGTTGGCCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IPCHLSSSLEEAQRIAVPHLMHS*PMLAQE Trigger: CTCTTGGGCCAACATGGGGCAGGAGTGCATCAAGTG...GGGAACAGCGATCCTTTGTGCCTCTTCCAATGAAGATGACAGGTGGCATGGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR CCA 90 bp | CGAGACCTCTGCTGGCCTCTGTCCTTCTACAGAGCCCAGGCCTATGGTGAAGAGATTTTCTCTTGCATTTaGGGCACTTGTACTCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RDLCWPLSFYRAQAYGEEIFSCI*GTCTRQ Trigger: TTGGCGAGTACAAGTGCCCCAAATGCAAGAGAAAAT...CTCTTCACCATAGGCCTGGGCTCTGTAGAAGGACAGAGGCCAGCAGAGGTCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR TCA 90 bp | GGGCTGCCACAGATAATACCTTTGTTAAGTGCTCAGAGAGTATGTTCTCCCAAAGGTGAGCGTCAGGTCTaGGAAATGCTCGGTGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLPQIIPLLSAQRVCSPKGERQV*EMLGEG Trigger: TCCCTCACCGAGCATTTCTCAGACCTGACGCTCACC...TTTGGGAGAACATACTCTCTGAGCACTTAACAAAGGTATTATCTGTGGCAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR CCA 90 bp | TTACCGTGTTGCCCACTGATAACTTCCCTTAAAAAGGCAATACTTCCAAAATACAGTAGCTGGGCTGGCTaGTACACCGAGGCGGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPCCPLITSLKKAILPKYSSWAG*YTEAAL Trigger: GAGCGCCGCCTCGGTGTACCAGCCAGCCCAGCTACT...GTATTTTGGAAGTATTGCCTTTTTAAGGGAAGTTATCAGTGGGCAACACGGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTGCCACAGATAATACCTTTGTTAAGTGCTCAGAGAGTATGTTCTCCCAAAGTCAGGTCTGAGAAATaGTCGGTGAGGGAGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLPQIIPLLSAQRVCSPKVRSEK*SVRELR Trigger: CCTCAGCTCCCTCACCGAGCATTTCTCAGACCTGAC...TTTGGGAGAACATACTCTCTGAGCACTTAACAAAGGTATTATCTGTGGCAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR CAA 72 bp | GCAGGGGGAAAGATTCCATGCCACCTGTCATCTTCATaGGAAGAGGCACAAAGGATCGCTGTTCCCTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: AGGKIPCHLSSS*EEAQRIAVPFL Trigger: TAAAAAGGGAACAGCGATCCTTTGTGCCTCTTCCAATGAAGATGACAGGTGGCATGGAATCTTTCCCCCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR TCA 90 bp | AAAATCTACCCTGCAGCTAGCTGCTGCAGACATACAACCATCTCTTCCACTTACTGTAGTGTCCTTTGTTaGAACACAGGTGGCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KIYPAASCCRHTTISSTYCSVLC*NTGGTG Trigger: ACCTGTGCCACCTGTGTTTCAACAAAGGACACTACA...GTAAGTGGAAGAGATGGTTGTATGTCTGCAGCAGCTAGCTGCAGGGTAGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR CAA 72 bp | ATCACTAGATCTACCGACTGCAAGCGATTGTCCCTTTaGAGTGTATTACAACCACACGCTTTCCTGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ITRSTDCKRLSL*SVLQPHAFLSP Trigger: AGGGGACAGGAAAGCGTGTGGTTGTAATACACTCAAAAGGGACAATCGCTTGCAGTCGGTAGATCTAGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| 3UTR CAA 72 bp | ACATACAACCATCTCTTCCACTTACCCCCTGGACCCTaGCTTAACACTTCACGTCAGTCATACAAAACATTT | + |
|
Preference number: 4 (lower is better) Translates to: TYNHLFHLPPGP*LNTSRQSYKTF Trigger: AAATGTTTTGTATGACTGACGTGAAGTGTTAAGCAAGGGTCCAGGGGGTAAGTGGAAGAGATGGTTGTATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTGTCCCCTGGGCTCGTAGGCCCTCTGAACATTGACTCTCCCGGCACCCAGGGCCGCTTGCTGGGCTaGCGGGCCTCGGAGGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FLSPGLVGPLNIDSPGTQGRLLG*RASEVS Trigger: GCTCACCTCCGAGGCCCGCAAGCCCAGCAAGCGGCC...CTGGGTGCCGGGAGAGTCAATGTTCAGAGGGCCTACGAGCCCAGGGGACAGGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR CAA 90 bp | AGGGCTATAGGAGAGGACATCTTAAGTGGCTATCAGGACAGAGGCTGGAGGGCGTGCTCCGGGCGGCCCTaGCCGAAGGCCAGCTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RAIGEDILSGYQDRGWRACSGRP*PKASSG Trigger: CCCGGAGCTGGCCTTCGGCAAGGGCCGCCCGGAGCA...CGCCCTCCAGCCTCTGTCCTGATAGCCACTTAAGATGTCCTCTCCTATAGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS TCA 90 bp | AGGCCGCTTGCTGGGCTTGCGGGCCTCGGAGGTGAGCGTCAGGTCTaGGAAATGCTCGGTGAGGGAGCTGAGGCCATCAGCGATGTTATT | + |
|
Preference number: 5 (lower is better) Translates to: RPLAGLAGLGGERQV*EMLGEGAEAISDVI Trigger: AATAACATCGCTGATGGCCTCAGCTCCCTCACCGAGCATTTCTCAGACCTGACGCTCACCTCCGAGGCCCGCAAGCCCAGCAAGCGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS GCA 90 bp | AGCCCAGGACCTTGCACTTTTCGCAGAGGTGCTGAGGGTGCTCCTTaGTCTGGTCAGACACATCCAGGCCGTCAGGCTTCTCCAGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPGPCTFRRGAEGAP*SGQTHPGRQASPGV Trigger: GACCCCTGGAGAAGCCTGACGGCCTGGATGTGTCTGACCAGAGCAAGGAGCACCCTCAGCACCTCTGCGAAAAGTGCAAGGTCCTGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTGTCCCCTGGGCTCGTAGGCCCTCTGAACATTGACTCTCCCGGCACCCAGCCAAAGCAGCGCTTCTaGCCTTGGTACGGCGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FLSPGLVGPLNIDSPGTQPKQRF*PWYGVR Trigger: TCTGACGCCGTACCAAGGCAAGAAGCGCTGCTTTGG...CTGGGTGCCGGGAGAGTCAATGTTCAGAGGGCCTACGAGCCCAGGGGACAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS GCA 90 bp | TTGCTGGGCTTGCGGGCCTCGGAGGTGAGCGTCAGGTCTGAGAAATaGTCGGTGAGGGAGCTGAGGCCATCAGCGATGTTATTGAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLGLRASEVSVRSEK*SVRELRPSAMLLRE Trigger: TTCCCTCAATAACATCGCTGATGGCCTCAGCTCCCTCACCGAGCATTTCTCAGACCTGACGCTCACCTCCGAGGCCCGCAAGCCCAGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGTGGGACAGGGCCTGGTTGGTCTTGGAGGGAGAACTTCCCTCAGGCCTCATTGTGCGGGTACACGTaGATGTGGCACTTGATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGGTGPGWSWRENFPQASLCGYT*MWHLMH Trigger: GTGCATCAAGTGCCACATCAACGTGTACCCGCACAA...TGAGGCCTGAGGGAAGTTCTCCCTCCAAGACCAACCAGGCCCTGTCCCACCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS GCA 90 bp | TTCTCTTGCATTTGGGGCACTTGTACTCGCCAAAGCAGCGCTTCTTaGCTTGGTACGGCGTCAGACCCTCACCTTTGGGGCGTGCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FSCIWGTCTRQSSAS*LGTASDPHLWGVPE Trigger: CTCAGGCACGCCCCAAAGGTGAGGGTCTGACGCCGTACCAAGGCAAGAAGCGCTGCTTTGGCGAGTACAAGTGCCCCAAATGCAAGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS CCA 90 bp | TCAGGCTTCTCCAGGGGTCTCTGCTTGTGCGGGTACACGTTGATGTaGCACTTGATGCACTCCTGCCCCATGTTGGCCCAAGAGTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGFSRGLCLCGYTLM*HLMHSCPMLAQEFP Trigger: TGGGAACTCTTGGGCCAACATGGGGCAGGAGTGCATCAAGTGCCACATCAACGTGTACCCGCACAAGCAGAGACCCCTGGAGAAGCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGCTTGTCACAGGGTAGGGGGCACACTGCTGACCCTGGCCAGGACAACAGCCTCATCCATTTTCTCTaGCATTTGGGGCACTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: CGLSQGRGHTADPGQDNSLIHFL*HLGHLY Trigger: GTACAAGTGCCCCAAATGCAAGAGAAAATGGATGAG...GCTGTTGTCCTGGCCAGGGTCAGCAGTGTGCCCCCTACCCTGTGACAAGCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS GCA 90 bp | CTCTGCTTGTGCGGGTACACGTTGATGTGGCACTTGATGCACTCCTaGCCCATGTTGGCCCAAGAGTTCCCACTCATCCATTTTCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LCLCGYTLMWHLMHS*PMLAQEFPLIHFLL Trigger: CAAGAGAAAATGGATGAGTGGGAACTCTTGGGCCAACATGGGGCAGGAGTGCATCAAGTGCCACATCAACGTGTACCCGCACAAGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS CCA 90 bp | CCATGTTGGCCCAAGAGTTCCCACTCATCCATTTTCTCTTGCATTTaGGGCACTTGTACTCGCCAAAGCAGCGCTTCTTGCCTTGGTACG | + |
|
Preference number: 5 (lower is better) Translates to: PCWPKSSHSSIFSCI*GTCTRQSSASCLGT Trigger: CGTACCAAGGCAAGAAGCGCTGCTTTGGCGAGTACAAGTGCCCCAAATGCAAGAGAAAATGGATGAGTGGGAACTCTTGGGCCAACATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR CAA 90 bp | AAAATCTACCCTGCAGCTAGCTGCTGCAGACATACAACCATCTCTTCCACTTACACGTTGATGTGGCACTaGATGCACTCCTGCCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: KIYPAASCCRHTTISSTYTLMWH*MHSCPM Trigger: CATGGGGCAGGAGTGCATCAAGTGCCACATCAACGT...GTAAGTGGAAGAGATGGTTGTATGTCTGCAGCAGCTAGCTGCAGGGTAGATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS-3UTR CAA 90 bp | AAAATCTACCCTGCAGCTAGCTGCTGCAGACATACAACCATCTCTTCCACTTACCATTTTCTCTTGCATTaGGGGCACTTGTACTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KIYPAASCCRHTTISSTYHFLLH*GHLYSP Trigger: TGGCGAGTACAAGTGCCCCAAATGCAAGAGAAAATG...GTAAGTGGAAGAGATGGTTGTATGTCTGCAGCAGCTAGCTGCAGGGTAGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
||
| CDS CAA 72 bp | GAGTGCAGGGGAGAACCCAGCTGCTCCGGGCGGCCCTaGCCGAAGGCCAGCTCCGGGGGCGCGGCGCCGGCG | + |
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Preference number: 6 (lower is better) Translates to: ECRGEPSCSGRP*PKASSGGAAPA Trigger: CGCCGGCGCCGCGCCCCCGGAGCTGGCCTTCGGCAAGGGCCGCCCGGAGCAGCTGGGTTCTCCCCTGCACTC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| CDS TCA 72 bp | GCTGGGCTTGCGGGCCTCGGAGGTGAGCGTCAGGTCTaGGAAATGCTCGGTGAGGGAGCTGAGGCCATCAGC | + |
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Preference number: 6 (lower is better) Translates to: AGLAGLGGERQV*EMLGEGAEAIS Trigger: GCTGATGGCCTCAGCTCCCTCACCGAGCATTTCTCAGACCTGACGCTCACCTCCGAGGCCCGCAAGCCCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| CDS GCA 72 bp | GGGAACCGTAGGGCGAAGCGTTCCTATACACGCTGCTaGTCAGCGCCTCTCCGCGCTGCAGCTGGAAGACGC | + |
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Preference number: 6 (lower is better) Translates to: GNRRAKRSYTRC*SAPLRAAAGRR Trigger: GCGTCTTCCAGCTGCAGCGCGGAGAGGCGCTGAGCAGCAGCGTGTATAGGAACGCTTCGCCCTACGGTTCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| CDS TCA 72 bp | CCTGGTGTGTGTCCTGAAGCGACAGGTAGACCCAGTTaGGTAGCTGGGCTGGCTGGTACACCGAGGCGGCGC | + |
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Preference number: 6 (lower is better) Translates to: PGVCPEATGRPS*VAGLAGTPRRR Trigger: GCGCCGCCTCGGTGTACCAGCCAGCCCAGCTACTCAACTGGGTCTACCTGTCGCTTCAGGACACACACCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| CDS CCA 72 bp | GGGCACTTGTACTCGCCAAAGCAGCGCTTCTTGCCTTaGTACGGCGTCAGACCCTCACCTTTGGGGCGTGCC | + |
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Preference number: 6 (lower is better) Translates to: GHLYSPKQRFLP*YGVRPSPLGRA Trigger: GGCACGCCCCAAAGGTGAGGGTCTGACGCCGTACCAAGGCAAGAAGCGCTGCTTTGGCGAGTACAAGTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| CDS CAA 72 bp | GGGGCACTTGTACTCGCCAAAGCAGCGCTTCTTGCCTaGGTACGGCGTCAGACCCTCACCTTTGGGGCGTGC | + |
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Preference number: 6 (lower is better) Translates to: GALVLAKAALLA*VRRQTLTFGAC Trigger: GCACGCCCCAAAGGTGAGGGTCTGACGCCGTACCAAGGCAAGAAGCGCTGCTTTGGCGAGTACAAGTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| CDS CAA 90 bp | CTTGCATTTGGGGCACTTGTACTCGCCAAAGCAGCGCTTCTTGCCTaGGTACGGCGTCAGACCCTCACCTTTGGGGCGTGCCTGAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: LAFGALVLAKAALLA*VRRQTLTFGACLRA Trigger: TGCCCTCAGGCACGCCCCAAAGGTGAGGGTCTGACGCCGTACCAAGGCAAGAAGCGCTGCTTTGGCGAGTACAAGTGCCCCAAATGCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| CDS GCA 72 bp | TTGCGGGCCTCGGAGGTGAGCGTCAGGTCTGAGAAATaGTCGGTGAGGGAGCTGAGGCCATCAGCGATGTTA | + |
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Preference number: 6 (lower is better) Translates to: LRASEVSVRSEK*SVRELRPSAML Trigger: TAACATCGCTGATGGCCTCAGCTCCCTCACCGAGCATTTCTCAGACCTGACGCTCACCTCCGAGGCCCGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| CDS GCA 72 bp | ATTTGGGGCACTTGTACTCGCCAAAGCAGCGCTTCTTaGCTTGGTACGGCGTCAGACCCTCACCTTTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: IWGTCTRQSSAS*LGTASDPHLWG Trigger: GCCCCAAAGGTGAGGGTCTGACGCCGTACCAAGGCAAGAAGCGCTGCTTTGGCGAGTACAAGTGCCCCAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| CDS GCA 72 bp | CCTTGCACTTTTCGCAGAGGTGCTGAGGGTGCTCCTTaGTCTGGTCAGACACATCCAGGCCGTCAGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: PCTFRRGAEGAP*SGQTHPGRQAS Trigger: AGAAGCCTGACGGCCTGGATGTGTCTGACCAGAGCAAGGAGCACCCTCAGCACCTCTGCGAAAAGTGCAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| CDS CCA 72 bp | TCCAGGGGTCTCTGCTTGTGCGGGTACACGTTGATGTaGCACTTGATGCACTCCTGCCCCATGTTGGCCCAA | + |
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Preference number: 6 (lower is better) Translates to: SRGLCLCGYTLM*HLMHSCPMLAQ Trigger: TTGGGCCAACATGGGGCAGGAGTGCATCAAGTGCCACATCAACGTGTACCCGCACAAGCAGAGACCCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| CDS CAA 72 bp | CATTTGGGGCACTTGTACTCGCCAAAGCAGCGCTTCTaGCCTTGGTACGGCGTCAGACCCTCACCTTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: HLGHLYSPKQRF*PWYGVRPSPLG Trigger: CCCCAAAGGTGAGGGTCTGACGCCGTACCAAGGCAAGAAGCGCTGCTTTGGCGAGTACAAGTGCCCCAAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| CDS CAA 72 bp | GGCTTCTCCAGGGGTCTCTGCTTGTGCGGGTACACGTaGATGTGGCACTTGATGCACTCCTGCCCCATGTTG | + |
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Preference number: 6 (lower is better) Translates to: GFSRGLCLCGYT*MWHLMHSCPML Trigger: CAACATGGGGCAGGAGTGCATCAAGTGCCACATCAACGTGTACCCGCACAAGCAGAGACCCCTGGAGAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| CDS CAA 90 bp | TTCTCCAGGGGTCTCTGCTTGTGCGGGTACACGTTGATGTGGCACTaGATGCACTCCTGCCCCATGTTGGCCCAAGAGTTCCCACTCATC | + |
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Preference number: 6 (lower is better) Translates to: FSRGLCLCGYTLMWH*MHSCPMLAQEFPLI Trigger: GATGAGTGGGAACTCTTGGGCCAACATGGGGCAGGAGTGCATCAAGTGCCACATCAACGTGTACCCGCACAAGCAGAGACCCCTGGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| CDS CAA 72 bp | GGTCTCTGCTTGTGCGGGTACACGTTGATGTGGCACTaGATGCACTCCTGCCCCATGTTGGCCCAAGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: GLCLCGYTLMWH*MHSCPMLAQEF Trigger: GAACTCTTGGGCCAACATGGGGCAGGAGTGCATCAAGTGCCACATCAACGTGTACCCGCACAAGCAGAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| CDS GCA 72 bp | TGCGGGTACACGTTGATGTGGCACTTGATGCACTCCTaGCCCATGTTGGCCCAAGAGTTCCCACTCATCCAT | + |
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Preference number: 6 (lower is better) Translates to: CGYTLMWHLMHS*PMLAQEFPLIH Trigger: ATGGATGAGTGGGAACTCTTGGGCCAACATGGGGCAGGAGTGCATCAAGTGCCACATCAACGTGTACCCGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| CDS CAA 90 bp | CCCATGTTGGCCCAAGAGTTCCCACTCATCCATTTTCTCTTGCATTaGGGGCACTTGTACTCGCCAAAGCAGCGCTTCTTGCCTTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: PMLAQEFPLIHFLLH*GHLYSPKQRFLPWY Trigger: GTACCAAGGCAAGAAGCGCTGCTTTGGCGAGTACAAGTGCCCCAAATGCAAGAGAAAATGGATGAGTGGGAACTCTTGGGCCAACATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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| CDS CAA 72 bp | ATGTTGGCCCAAGAGTTCCCACTCATCCATTTTCTCTaGCATTTGGGGCACTTGTACTCGCCAAAGCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: MLAQEFPLIHFL*HLGHLYSPKQR Trigger: GCGCTGCTTTGGCGAGTACAAGTGCCCCAAATGCAAGAGAAAATGGATGAGTGGGAACTCTTGGGCCAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069180.8 |
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