Pregenerated sensors for ZCCHC18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031428Ensembl transcript IDs: ENSMUST00000033804.5, ENSMUST00000101227.3, ENSMUST00000113067.8
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGGCCTTCTACTCTCCTTCTGGCCCTGAAGGCTTTAGGACAACATaGAGTGCTGGGAGCAGGGGAAATGGTCATAGGCAGAAAACACAA | + |
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Preference number: 1 (lower is better) Translates to: RAFYSPSGPEGFRTT*SAGSRGNGHRQKTQ Trigger: TTGTGTTTTCTGCCTATGACCATTTCCCCTGCTCCCAGCACTTCATGTTGTCCTAAAGCCTTCAGGGCCAGAAGGAGAGTAGAAGGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| 3UTR TCA 90 bp | CAGAGAAAGACACACAGAGAAACAACCATTAAGCAGTTAATGGAATaGGCAAGGAATGATGTGGGCCCATGCCTCTCTGTTGCATGGTAC | + |
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Preference number: 1 (lower is better) Translates to: QRKTHRETTIKQLME*ARNDVGPCLSVAWY Trigger: GTACCATGCAACAGAGAGGCATGGGCCCACATCATTCCTTGCTCATTCCATTAACTGCTTAATGGTTGTTTCTCTGTGTGTCTTTCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| 3UTR GCA 90 bp | GGCCACATAGACAAACAGGGCCAGAACCACGTGAACAGCAATAATTaGAGCATAAAAATAGCTGTCTCTATTGGACATTCCAACAGCATC | + |
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Preference number: 1 (lower is better) Translates to: GHIDKQGQNHVNSNN*SIKIAVSIGHSNSI Trigger: GATGCTGTTGGAATGTCCAATAGAGACAGCTATTTTTATGCTGCAATTATTGCTGTTCACGTGGTTCTGGCCCTGTTTGTCTATGTGGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| 3UTR-3UTR TCA 90 bp | GAACCTTTGACCCTGGCAAGCTCTATCTCAGGAACACAGGGCCTTCTACTCTCCCCTGCATGTAGCACCTaGTCTCTACTTCTGTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: EPLTLASSISGTQGLLLSPACST*SLLLSL Trigger: CAGGGACAGAAGTAGAGATCAGGTGCTACATGCAGG...GGAGAGTAGAAGGCCCTGTGTTCCTGAGATAGAGCTTGCCAGGGTCAAAGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| 3UTR-3UTR CCA 90 bp | ACTTCTGTCCCTGACATGCCAGCTACCAGTGCTGTACACCCTCTTCACAGACAGGAGCAAGGAATGATGTaGGCCCATGCCTCTCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: TSVPDMPATSAVHPLHRQEQGMM*AHASLL Trigger: CAACAGAGAGGCATGGGCCCACATCATTCCTTGCTC...CTGTCTGTGAAGAGGGTGTACAGCACTGGTAGCTGGCATGTCAGGGACAGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| 3UTR-3UTR TCA 90 bp | TGTGAGCCAACTCTATCACCAGGAAATGAGTGTGGCTTCAGTAAAGGGGGAGTAGGAATGAGCAAGGAATaGTGTGGGCCCATGCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: CEPTLSPGNECGFSKGGVGMSKE*CGPMPL Trigger: GAGAGGCATGGGCCCACATCATTCCTTGCTCATTCC...TACTCCCCCTTTACTGAAGCCACACTCATTTCCTGGTGATAGAGTTGGCTCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| 3UTR-3UTR TCA 90 bp | GAACCTTTGACCCTGGCAAGCTCTATCTCAGGAACACAGGGCCTTCTACTCTCCAAGCAGTTAATGGAATaGGCAAGGAATGATGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: EPLTLASSISGTQGLLLSKQLME*ARNDVG Trigger: GCCCACATCATTCCTTGCTCATTCCATTAACTGCTT...GGAGAGTAGAAGGCCCTGTGTTCCTGAGATAGAGCTTGCCAGGGTCAAAGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| 3UTR-3UTR TCA 90 bp | CTAGGCACTCGAAGGCCAGATGTGAGTGCAGAATCCCCAAGAAGGCTGTATAACCATTCACCAAGGGGCTaGCAATTCAGGGTGAGATTT | + |
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Preference number: 2 (lower is better) Translates to: LGTRRPDVSAESPRRLYNHSPRG*QFRVRF Trigger: AAATCTCACCCTGAATTGTCAGCCCCTTGGTGAATG...GTTATACAGCCTTCTTGGGGATTCTGCACTCACATCTGGCCTTCGAGTGCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| 3UTR-3UTR TCA 90 bp | CTGGAGGCTGCAGCACGTTTAGGGCTGCTTTATCAAAGAGCTCCAGGGCATGGCTGTTATATTGTAAAATaGTTCAGACTGCAGCCGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LEAAARLGLLYQRAPGHGCYIVK*FRLQPQ Trigger: CTGCGGCTGCAGTCTGAATCATTTTACAATATAACA...GCCATGCCCTGGAGCTCTTTGATAAAGCAGCCCTAAACGTGCTGCAGCCTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| 3UTR-3UTR TCA 90 bp | CTGGAGGCTGCAGCACGTTTAGGGCTGCTTTATCAAAGAGCTCCAGGGCATGGCTTGCACCATTTTTGGTaGGATGAAAATTCACACACC | + |
|
Preference number: 2 (lower is better) Translates to: LEAAARLGLLYQRAPGHGLHHFW*DENSHT Trigger: GGTGTGTGAATTTTCATCTCACCAAAAATGGTGCAA...GCCATGCCCTGGAGCTCTTTGATAAAGCAGCCCTAAACGTGCTGCAGCCTCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGGCTGCAGCACGTTTAGGGCTGCTTTATCAAAGAGCTCCAGGGCATGGCTTCAGATCCTCAGATTaGCATTCATTTACACTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: LEAAARLGLLYQRAPGHGFRSSD*HSFTLC Trigger: GCAGAGTGTAAATGAATGCCAATCTGAGGATCTGAA...GCCATGCCCTGGAGCTCTTTGATAAAGCAGCCCTAAACGTGCTGCAGCCTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| 3UTR-3UTR TCA 90 bp | ACTTCTGTCCCTGACATGCCAGCTACCAGTGCTGTACACCCTCTTCACAGACAGTCCAGAATTAGCTTCTaGGGAGATTCAAACACTGAT | + |
|
Preference number: 2 (lower is better) Translates to: TSVPDMPATSAVHPLHRQSRISF*GDSNTD Trigger: ATCAGTGTTTGAATCTCCTCAGAAGCTAATTCTGGA...CTGTCTGTGAAGAGGGTGTACAGCACTGGTAGCTGGCATGTCAGGGACAGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| 3UTR-3UTR GCA 90 bp | CCACAAGAAGAATGCTCAAAGACAGATACCAGAGGTCAGCTTCAGCTTCTGATTAATGATGTGGGCCCATaGCTCTCTGTTGCATGGTAC | + |
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Preference number: 2 (lower is better) Translates to: PQEECSKTDTRGQLQLLINDVGP*LSVAWY Trigger: GTACCATGCAACAGAGAGGCATGGGCCCACATCATT...AATCAGAAGCTGAAGCTGACCTCTGGTATCTGTCTTTGAGCATTCTTCTTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| 3UTR-3UTR TCA 90 bp | ATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCTTTTTCTTCTCCAGAATTAGCTTCTaGGGAGATTCAAACACTGAT | + |
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Preference number: 2 (lower is better) Translates to: MMWAHASLLHGTPVCFFFSRISF*GDSNTD Trigger: ATCAGTGTTTGAATCTCCTCAGAAGCTAATTCTGGA...GAAGAAAAAGCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| 3UTR-3UTR TCA 90 bp | TCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGGGAATGAGCAAGGAATaGTGTGGGCCCATGCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: SKRYHFTDRLKSPEKDTQGMSKE*CGPMPL Trigger: GAGAGGCATGGGCCCACATCATTCCTTGCTCATTCC...CTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| 3UTR-3UTR GCA 90 bp | AGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGAGAAACAATGATGTGGGCCCATaGCTCTCTGTTGCATGGTAC | + |
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Preference number: 2 (lower is better) Translates to: RYHFTDRLKSPEKDTQRNNDVGP*LSVAWY Trigger: GTACCATGCAACAGAGAGGCATGGGCCCACATCATT...GTTTCTCTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGAGCCAACTCTATCACCAGGAAATGAGTGTGGCTTCAGTAAAGGGGGAGTATACCCACAAGAAGAATaGTCAAAGACAGATACCAGA | + |
|
Preference number: 2 (lower is better) Translates to: CEPTLSPGNECGFSKGGVYPQEE*SKTDTR Trigger: TCTGGTATCTGTCTTTGAGCATTCTTCTTGTGGGTA...TACTCCCCCTTTACTGAAGCCACACTCATTTCCTGGTGATAGAGTTGGCTCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| 3UTR-3UTR CCA 90 bp | CACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGAGAAACAACCATGAGCAAGGAATGATGTaGGCCCATGCCTCTCTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: HFTDRLKSPEKDTQRNNHEQGMM*AHASLL Trigger: CAACAGAGAGGCATGGGCCCACATCATTCCTTGCTC...ATGGTTGTTTCTCTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| 3UTR-3UTR GCA 90 bp | CACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGAGAAACAACCATAATGATGTGGGCCCATaGCTCTCTGTTGCATGGTAC | + |
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Preference number: 2 (lower is better) Translates to: HFTDRLKSPEKDTQRNNHNDVGP*LSVAWY Trigger: GTACCATGCAACAGAGAGGCATGGGCCCACATCATT...ATGGTTGTTTCTCTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| 3UTR-3UTR GCA 90 bp | CCACAAGAAGAATGCTCAAAGACAGATACCAGAGGTCAGCTTCAGCTTCTGATTACCCTAACTAGTAGGTaGAGATGGCTGTATGAACTA | + |
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Preference number: 2 (lower is better) Translates to: PQEECSKTDTRGQLQLLITLTSR*RWLYEL Trigger: TAGTTCATACAGCCATCTGCACCTACTAGTTAGGGT...AATCAGAAGCTGAAGCTGACCTCTGGTATCTGTCTTTGAGCATTCTTCTTGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| 3UTR-3UTR CCA 90 bp | CAGCACTTATATGTGATCACTTTTATCAATACATATATACCGAGGCACACAGGTGAGCAAGGAATGATGTaGGCCCATGCCTCTCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: QHLYVITFINTYIPRHTGEQGMM*AHASLL Trigger: CAACAGAGAGGCATGGGCCCACATCATTCCTTGCTC...ACCTGTGTGCCTCGGTATATATGTATTGATAAAAGTGATCACATATAAGTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033804.5 ENSMUST00000113067.8 |
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| 3UTR-3UTR TCA 90 bp | AGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGAGAAACAAGCAGTTAATGGAATaGGCAAGGAATGATGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: RYHFTDRLKSPEKDTQRNKQLME*ARNDVG Trigger: GCCCACATCATTCCTTGCTCATTCCATTAACTGCTT...GTTTCTCTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACATGCCTCTCTGTTGCATaGTACCCCAGTTTGCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: GSKRYHFTDRLKSPEKDTCLSVA*YPSLLF Trigger: AAAAAGCAAACTGGGGTACCATGCAACAGAGAGGCA...TGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCACTTATATGTGATCACTTTTATCAATACATATATACCGAGGCACACAGGTAAGCAGTTAATGGAATaGGCAAGGAATGATGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: QHLYVITFINTYIPRHTGKQLME*ARNDVG Trigger: GCCCACATCATTCCTTGCTCATTCCATTAACTGCTT...ACCTGTGTGCCTCGGTATATATGTATTGATAAAAGTGATCACATATAAGTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033804.5 ENSMUST00000113067.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACATCCAGAATTAGCTTCTaGGGAGATTCAAACACTGAT | + |
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Preference number: 2 (lower is better) Translates to: GSKRYHFTDRLKSPEKDTSRISF*GDSNTD Trigger: ATCAGTGTTTGAATCTCCTCAGAAGCTAATTCTGGA...TGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| 3UTR-3UTR GCA 90 bp | TCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGCATGGTACCCCAGTTTaGTTTTTCTTCTCCAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: SKRYHFTDRLKSPEKDTQHGTPV*FFFSKE Trigger: TTCTTTGGAGAAGAAAAAGCAAACTGGGGTACCATG...CTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| 3UTR-3UTR GCA 90 bp | TTATATGTGATCACTTTTATCAATACATATATACCGAGGCACACAGGTACAGGGCATGGTACCCCAGTTTaGTTTTTCTTCTCCAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: LYVITFINTYIPRHTGTGHGTPV*FFFSKE Trigger: TTCTTTGGAGAAGAAAAAGCAAACTGGGGTACCATG...CCCTGTACCTGTGTGCCTCGGTATATATGTATTGATAAAAGTGATCACATATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033804.5 ENSMUST00000113067.8 |
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| 3UTR TCA 72 bp | GATACCAGAGGTCAGCTTCAGCTTCTGATTGCAGGCTaGGACGTGAGGGAGAACCAGACAGGGGTGGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: DTRGQLQLLIAG*DVRENQTGVAP Trigger: AGGAGCCACCCCTGTCTGGTTCTCCCTCACGTCTCAGCCTGCAATCAGAAGCTGAAGCTGACCTCTGGTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| 3UTR TCA 72 bp | TACTCTCCTTCTGGCCCTGAAGGCTTTAGGACAACATaGAGTGCTGGGAGCAGGGGAAATGGTCATAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: YSPSGPEGFRTT*SAGSRGNGHRQ Trigger: CTGCCTATGACCATTTCCCCTGCTCCCAGCACTTCATGTTGTCCTAAAGCCTTCAGGGCCAGAAGGAGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| 3UTR TCA 72 bp | GAAAGATGTAAGAAATGTCCCTCCCCCTTGAACCTTTaGCCCTGGCAAGCTCTATCTCAGGAACACAGGGCC | + |
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Preference number: 3 (lower is better) Translates to: ERCKKCPSPLNL*PWQALSQEHRA Trigger: GGCCCTGTGTTCCTGAGATAGAGCTTGCCAGGGTCAAAGGTTCAAGGGGGAGGGACATTTCTTACATCTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| 3UTR-3UTR CAA 90 bp | ACTTCTGTCCCTGACATGCCAGCTACCAGTGCTGTACACCCTCTTCACAGACAGGCATGGTACCCCAGTTaGCTTTTTCTTCTCCAAAGA | + |
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Preference number: 3 (lower is better) Translates to: TSVPDMPATSAVHPLHRQAWYPS*LFLLQR Trigger: TCTTTGGAGAAGAAAAAGCAAACTGGGGTACCATGC...CTGTCTGTGAAGAGGGTGTACAGCACTGGTAGCTGGCATGTCAGGGACAGAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| 3UTR CCA 72 bp | GGAGAACCAGACAGGGGTGGCTCCTCTTATGGGCCATaGTCAGATTTCTCAATATGGTTGAGGACATTGAGA | + |
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Preference number: 3 (lower is better) Translates to: GEPDRGGSSYGP*SDFSIWLRTLR Trigger: TCTCAATGTCCTCAACCATATTGAGAAATCTGACCATGGCCCATAAGAGGAGCCACCCCTGTCTGGTTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| 3UTR GCA 72 bp | AATATGGTTGAGGACATTGAGACCCTAACTAGTAGGTaGAGATGGCTGTATGAACTAGGAGGCAGGCCAGTA | + |
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Preference number: 3 (lower is better) Translates to: NMVEDIETLTSR*RWLYELGGRPV Trigger: TACTGGCCTGCCTCCTAGTTCATACAGCCATCTGCACCTACTAGTTAGGGTCTCAATGTCCTCAACCATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| 3UTR TCA 72 bp | AGACCTAGATTTTGTTCACAGTACCTACCCATATGGTaGCTTACAAACTCCAGGTACACGGGATCTGACATC | + |
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Preference number: 3 (lower is better) Translates to: RPRFCSQYLPIW*LTNSRYTGSDI Trigger: GATGTCAGATCCCGTGTACCTGGAGTTTGTAAGTCACCATATGGGTAGGTACTGTGAACAAAATCTAGGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| 3UTR TCA 72 bp | CAGACAGACCTCTGCAAACCCTGTTATATTGTAAAATaGTTCAGACTGCAGCCGCAGAGGTATTTCATCAGA | + |
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Preference number: 3 (lower is better) Translates to: QTDLCKPCYIVK*FRLQPQRYFIR Trigger: TCTGATGAAATACCTCTGCGGCTGCAGTCTGAATCATTTTACAATATAACAGGGTTTGCAGAGGTCTGTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| 3UTR-3UTR CAA 90 bp | CAGCACTTATATGTGATCACTTTTATCAATACATATATACCGAGGCACACAGGTGCATGGTACCCCAGTTaGCTTTTTCTTCTCCAAAGA | + |
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Preference number: 3 (lower is better) Translates to: QHLYVITFINTYIPRHTGAWYPS*LFLLQR Trigger: TCTTTGGAGAAGAAAAAGCAAACTGGGGTACCATGC...ACCTGTGTGCCTCGGTATATATGTATTGATAAAAGTGATCACATATAAGTGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033804.5 ENSMUST00000113067.8 |
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| 3UTR GCA 72 bp | TTTCTCAGTAAAAGACTAATGTACCCACAAGAAGAATaGTCAAAGACAGATACCAGAGGTCAGCTTCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: FLSKRLMYPQEE*SKTDTRGQLQL Trigger: AAGCTGAAGCTGACCTCTGGTATCTGTCTTTGAGCATTCTTCTTGTGGGTACATTAGTCTTTTACTGAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| CDS-3UTR TCA 90 bp | GAGCAAGGAATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCCTGTTTGCCTCGCTCTaGGGAAGGACCCCTGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: EQGMMWAHASLLHGTPVCLFASL*GRTPAW Trigger: CCAGGCAGGGGTCCTTCCTCAGAGCGAGGCAAACAG...GCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCATTCCTTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS-3UTR GCA 90 bp | GAGCAAGGAATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCGACCACAGGGCTGGCTaGCCGCTCCATCACTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: EQGMMWAHASLLHGTPVCDHRAG*PLHHCL Trigger: GAGACAGTGATGGAGCGGGCAGCCAGCCCTGTGGTC...GCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCATTCCTTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS-3UTR TCA 90 bp | GAGCAAGGAATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCTTGGGTCTCTCCATGTaGGTCAGCTCCTGCAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: EQGMMWAHASLLHGTPVCLGLSM*VSSCRV Trigger: CACTCTGCAGGAGCTGACTCACATGGAGAGACCCAA...GCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCATTCCTTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS-3UTR GCA 90 bp | GCAAGGAATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCTTCCTACAAGGAGCTGGTaGAGGCGAGTCCTGTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: ARNDVGPCLSVAWYPSLLPTRSW*RRVLFA Trigger: GGCAAACAGGACTCGCCTGCACCAGCTCCTTGTAGG...AAGCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCATTCCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS-3UTR GCA 90 bp | CTGGAGGCTGCAGCACGTTTAGGGCTGCTTTATCAAAGAGCTCCAGGGCATGGCGGCCCGTTATTCCTTTaGCCAGAACCACTGCTAGTG | + |
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Preference number: 4 (lower is better) Translates to: LEAAARLGLLYQRAPGHGGPLFL*PEPLLV Trigger: CACTAGCAGTGGTTCTGGGCAAAGGAATAACGGGCC...GCCATGCCCTGGAGCTCTTTGATAAAGCAGCCCTAAACGTGCTGCAGCCTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| CDS-3UTR TCA 90 bp | GCAAGGAATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCTTCCCTCTTCACCACAATaGGGACAGCGGATTGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: ARNDVGPCLSVAWYPSLLPSSPQ*GQRIGY Trigger: GTACCCAATCCGCTGTCCTCATTGTGGTGAAGAGGG...AAGCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCATTCCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS-3UTR GCA 90 bp | ATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCTTTTTCTTCCCTGAGTACTGGCTGTaGCTCGGAGGGATGAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: MMWAHASLLHGTPVCFFFPEYWL*LGGMRH Trigger: GTGCCTCATCCCTCCGAGGCACAGCCAGTACTCAGG...GAAGAAAAAGCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS-3UTR TCA 90 bp | GAGCAAGGAATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCCCTCCCTTATCATCCTaGTCAACTCCAGGAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EQGMMWAHASLLHGTPVCPPLSS*STPGSQ Trigger: CTGACTTCCTGGAGTTGATCAGGATGATAAGGGAGG...GCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCATTCCTTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR GCA 90 bp | GAGCAAGGAATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCCCTGTGCCTGCAGGGTaGTTAAAAATTTGCCATGCG | + |
|
Preference number: 4 (lower is better) Translates to: EQGMMWAHASLLHGTPVCPVPAG*LKICHA Trigger: CGCATGGCAAATTTTTAAGCACCCTGCAGGCACAGG...GCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCATTCCTTGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR GCA 90 bp | ATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCTTTTTCTTCCCTACAAGGAGCTGGTaGAGGCGAGTCCTGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: MMWAHASLLHGTPVCFFFPTRSW*RRVLFA Trigger: GGCAAACAGGACTCGCCTGCACCAGCTCCTTGTAGG...GAAGAAAAAGCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR GCA 90 bp | GCAAGGAATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCTTGGCCCGTTATTCCTTTaGCCAGAACCACTGCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ARNDVGPCLSVAWYPSLLGPLFL*PEPLLV Trigger: CACTAGCAGTGGTTCTGGGCAAAGGAATAACGGGCC...AAGCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCATTCCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR TCA 90 bp | GCAAGGAATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCTTCCTCCCTTATCATCCTaGTCAACTCCAGGAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ARNDVGPCLSVAWYPSLLPPLSS*STPGSQ Trigger: CTGACTTCCTGGAGTTGATCAGGATGATAAGGGAGG...AAGCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCATTCCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR TCA 90 bp | ATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCTTTTTCTTCCCCTCTTCACCACAATaGGGACAGCGGATTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: MMWAHASLLHGTPVCFFFPSSPQ*GQRIGY Trigger: GTACCCAATCCGCTGTCCTCATTGTGGTGAAGAGGG...GAAGAAAAAGCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGACTGCAGCCGCAGAGGTATTTCATCAGACAAGAGCACTTTATGCCCTCACCTACAAGGAGCTGGTaGAGGCGAGTCCTGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FRLQPQRYFIRQEHFMPSPTRSW*RRVLFA Trigger: GGCAAACAGGACTCGCCTGCACCAGCTCCTTGTAGG...TGAGGGCATAAAGTGCTCTTGTCTGATGAAATACCTCTGCGGCTGCAGTCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
||
| CDS-3UTR GCA 90 bp | GAGCAAGGAATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCAGCGGATTGGGTACTTaGGCTTTCTGGTTCTACCTA | + |
|
Preference number: 4 (lower is better) Translates to: EQGMMWAHASLLHGTPVCSGLGT*AFWFYL Trigger: TAGGTAGAACCAGAAAGCGCAAGTACCCAATCCGCT...GCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCATTCCTTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAAGGAATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCGCCCTCAGCATGGAATaGGCAAAAGGCATAAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EQGMMWAHASLLHGTPVCALSME*AKGIKA Trigger: AGCTTTTATGCCTTTTGCCCATTCCATGCTGAGGGC...GCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCATTCCTTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAGGCTGCAGCACGTTTAGGGCTGCTTTATCAAAGAGCTCCAGGGCATGGCTTATGCGCATGCATTTaGAGAAGCCCCTTAAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEAAARLGLLYQRAPGHGLCACI*RSPLSL Trigger: CAAGCTTAAGGGGCTTCTCCAAATGCATGCGCATAA...GCCATGCCCTGGAGCTCTTTGATAAAGCAGCCCTAAACGTGCTGCAGCCTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
||
| CDS-3UTR GCA 90 bp | GAGCAAGGAATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCTTCTCTCCCTGTGCCTaGAGGGTGCTTAAAAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: EQGMMWAHASLLHGTPVCFSPCA*RVLKNL Trigger: CAAATTTTTAAGCACCCTGCAGGCACAGGGAGAGAA...GCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCATTCCTTGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR GCA 90 bp | ATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCTTTTTCTTCGGCCCGTTATTCCTTTaGCCAGAACCACTGCTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: MMWAHASLLHGTPVCFFFGPLFL*PEPLLV Trigger: CACTAGCAGTGGTTCTGGGCAAAGGAATAACGGGCC...GAAGAAAAAGCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR TCA 90 bp | AGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGAGAAACCTGTTTGCCTCGCTCTaGGGAAGGACCCCTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RYHFTDRLKSPEKDTQRNLFASL*GRTPAW Trigger: CCAGGCAGGGGTCCTTCCTCAGAGCGAGGCAAACAG...GTTTCTCTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR TCA 90 bp | GAGCAAGGAATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCGATCACATCTTCATCTaGATCATCCTGGGAATCATC | + |
|
Preference number: 4 (lower is better) Translates to: EQGMMWAHASLLHGTPVCDHIFI*IILGII Trigger: GATGATTCCCAGGATGATTCAGATGAAGATGTGATC...GCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCATTCCTTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR GCA 90 bp | ATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCTTTTTCTTCCCTGTGCCTGCAGGGTaGTTAAAAATTTGCCATGCG | + |
|
Preference number: 4 (lower is better) Translates to: MMWAHASLLHGTPVCFFFPVPAG*LKICHA Trigger: CGCATGGCAAATTTTTAAGCACCCTGCAGGCACAGG...GAAGAAAAAGCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAAGCTCTATCTCAGGAACACAGGGCCTTCTACTCTCCTTCTGGCCCTGAAAGGACCTCATGGACTTaGCTTAGCCAGTTTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WQALSQEHRAFYSPSGPERTSWT*LSQFSK Trigger: CTTTGAAAACTGGCTAAGCCAAGTCCATGAGGTCCT...TTCAGGGCCAGAAGGAGAGTAGAAGGCCCTGTGTTCCTGAGATAGAGCTTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
||
| CDS-3UTR CCA 90 bp | ATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCTTTTTCTTCAGACATAGGCCAATCTaGCAGGACCTCATGGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: MMWAHASLLHGTPVCFFFRHRPI*QDLMDL Trigger: CAAGTCCATGAGGTCCTGCCAGATTGGCCTATGTCT...GAAGAAAAAGCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR TCA 90 bp | GCAAGGAATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCTTTTCTCATCAGGCGCTTaGTCTTTTCTTCTTCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: ARNDVGPCLSVAWYPSLLFSSGA*SFLLQT Trigger: TGTCTGAAGAAGAAAAGATCAAGCGCCTGATGAGAA...AAGCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCATTCCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR GCA 90 bp | GCAAGGAATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCTTGGGTGCTTAAAAATTTaGCATGCGCTGTTATACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ARNDVGPCLSVAWYPSLLGCLKI*HALLYC Trigger: GCAGTATAACAGCGCATGGCAAATTTTTAAGCACCC...AAGCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCATTCCTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR GCA 90 bp | TCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGGACCACAGGGCTGGCTaGCCGCTCCATCACTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKRYHFTDRLKSPEKDTQDHRAG*PLHHCL Trigger: GAGACAGTGATGGAGCGGGCAGCCAGCCCTGTGGTC...CTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR GCA 90 bp | GGTTCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACAGACCACAGGGCTGGCTaGCCGCTCCATCACTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSKRYHFTDRLKSPEKDTDHRAG*PLHHCL Trigger: GAGACAGTGATGGAGCGGGCAGCCAGCCCTGTGGTC...TGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR GCA 90 bp | ATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCTTTTTCTTCAGCGGATTGGGTACTTaGGCTTTCTGGTTCTACCTA | + |
|
Preference number: 4 (lower is better) Translates to: MMWAHASLLHGTPVCFFFSGLGT*AFWFYL Trigger: TAGGTAGAACCAGAAAGCGCAAGTACCCAATCCGCT...GAAGAAAAAGCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR CCA 90 bp | GAAGAATGCTCAAAGACAGATACCAGAGGTCAGCTTCAGCTTCTGATTGCAGGCGATCACATACAGGGATaGTTTCTCTCCCTGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EECSKTDTRGQLQLLIAGDHIQG*FLSLCL Trigger: CAGGCACAGGGAGAGAAACCATCCCTGTATGTGATC...GCCTGCAATCAGAAGCTGAAGCTGACCTCTGGTATCTGTCTTTGAGCATTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
||
| CDS-3UTR CCA 90 bp | ATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCTTTTTCTTCATGGTACAGAGGGTTTaGGTCTCTCCATGTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MMWAHASLLHGTPVCFFFMVQRV*VSPCES Trigger: TGACTCACATGGAGAGACCCAAACCCTCTGTACCAT...GAAGAAAAAGCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR TCA 90 bp | ACCAAGGGGCTGACAATTCAGGGTGAGATTTTTCAGGTAATGCACACTTTAGTTTTGGGTCTCTCCATGTaGGTCAGCTCCTGCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TKGLTIQGEIFQVMHTLVLGLSM*VSSCRV Trigger: CACTCTGCAGGAGCTGACTCACATGGAGAGACCCAA...AACTAAAGTGTGCATTACCTGAAAAATCTCACCCTGAATTGTCAGCCCCTTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033804.5 ENSMUST00000113067.8 |
||
| CDS-3UTR GCA 90 bp | GGTTCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACCTGAGTACTGGCTGTaGCTCGGAGGGATGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSKRYHFTDRLKSPEKDTPEYWL*LGGMRH Trigger: GTGCCTCATCCCTCCGAGGCACAGCCAGTACTCAGG...TGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR CCA 90 bp | ATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCTTTTTCTTCCTGCGACATTTAGATTaGGATTGTCAGCCTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: MMWAHASLLHGTPVCFFFLRHLD*DCQPGT Trigger: TGTTCCAGGCTGACAATCCCAATCTAAATGTCGCAG...GAAGAAAAAGCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR CCA 90 bp | GAAGAATGCTCAAAGACAGATACCAGAGGTCAGCTTCAGCTTCTGATTGCAGGCATGGTACAGAGGGTTTaGGTCTCTCCATGTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EECSKTDTRGQLQLLIAGMVQRV*VSPCES Trigger: TGACTCACATGGAGAGACCCAAACCCTCTGTACCAT...GCCTGCAATCAGAAGCTGAAGCTGACCTCTGGTATCTGTCTTTGAGCATTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
||
| CDS-3UTR GCA 90 bp | CCACAAGAAGAATGCTCAAAGACAGATACCAGAGGTCAGCTTCAGCTTCTGATTCCTGTGCCTGCAGGGTaGTTAAAAATTTGCCATGCG | + |
|
Preference number: 4 (lower is better) Translates to: PQEECSKTDTRGQLQLLIPVPAG*LKICHA Trigger: CGCATGGCAAATTTTTAAGCACCCTGCAGGCACAGG...AATCAGAAGCTGAAGCTGACCTCTGGTATCTGTCTTTGAGCATTCTTCTTGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
||
| CDS-3UTR GCA 90 bp | CAGCACTTATATGTGATCACTTTTATCAATACATATATACCGAGGCACACAGGTCCTGAGTACTGGCTGTaGCTCGGAGGGATGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QHLYVITFINTYIPRHTGPEYWL*LGGMRH Trigger: GTGCCTCATCCCTCCGAGGCACAGCCAGTACTCAGG...ACCTGTGTGCCTCGGTATATATGTATTGATAAAAGTGATCACATATAAGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033804.5 ENSMUST00000113067.8 |
||
| 3UTR CAA 72 bp | AATGAGCAAGGAATGATGTGGGCCCATGCCTCTCTGTaGCATGGTACCCCAGTTTGCTTTTTCTTCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NEQGMMWAHASL*HGTPVCFFFSK Trigger: TTTGGAGAAGAAAAAGCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCATTCCTTGCTCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR TCA 90 bp | CACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGAGAAACAACCATCCCTCTTCACCACAATaGGGACAGCGGATTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HFTDRLKSPEKDTQRNNHPSSPQ*GQRIGY Trigger: GTACCCAATCCGCTGTCCTCATTGTGGTGAAGAGGG...ATGGTTGTTTCTCTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR TCA 90 bp | CACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGAGAAACAACCATTTGGGTCTCTCCATGTaGGTCAGCTCCTGCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HFTDRLKSPEKDTQRNNHLGLSM*VSSCRV Trigger: CACTCTGCAGGAGCTGACTCACATGGAGAGACCCAA...ATGGTTGTTTCTCTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR CCA 90 bp | ACCAAGGGGCTGACAATTCAGGGTGAGATTTTTCAGGTAATGCACACTTTAGTTATGGTACAGAGGGTTTaGGTCTCTCCATGTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TKGLTIQGEIFQVMHTLVMVQRV*VSPCES Trigger: TGACTCACATGGAGAGACCCAAACCCTCTGTACCAT...AACTAAAGTGTGCATTACCTGAAAAATCTCACCCTGAATTGTCAGCCCCTTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033804.5 ENSMUST00000113067.8 |
||
| CDS-3UTR TCA 90 bp | TCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGCCTCCCTTATCATCCTaGTCAACTCCAGGAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKRYHFTDRLKSPEKDTQPPLSS*STPGSQ Trigger: CTGACTTCCTGGAGTTGATCAGGATGATAAGGGAGG...CTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR CCA 90 bp | TCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGGATCACATACAGGGATaGTTTCTCTCCCTGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKRYHFTDRLKSPEKDTQDHIQG*FLSLCL Trigger: CAGGCACAGGGAGAGAAACCATCCCTGTATGTGATC...CTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR CCA 90 bp | CACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGAGAAACAACCATGATCACATACAGGGATaGTTTCTCTCCCTGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HFTDRLKSPEKDTQRNNHDHIQG*FLSLCL Trigger: CAGGCACAGGGAGAGAAACCATCCCTGTATGTGATC...ATGGTTGTTTCTCTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR CCA 90 bp | GGTTCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACAGCCCTCAGCATGGAATaGGCAAAAGGCATAAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSKRYHFTDRLKSPEKDTALSME*AKGIKA Trigger: AGCTTTTATGCCTTTTGCCCATTCCATGCTGAGGGC...TGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR CCA 90 bp | TTACAAATGTTTCAGATCCTCAGATTGGCATTCATTTACACTCTGCTGTCAGCCCTGCGACATTTAGATTaGGATTGTCAGCCTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: LQMFQILRLAFIYTLLSALRHLD*DCQPGT Trigger: TGTTCCAGGCTGACAATCCCAATCTAAATGTCGCAG...GGCTGACAGCAGAGTGTAAATGAATGCCAATCTGAGGATCTGAAACATTTGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
||
| CDS-3UTR CCA 90 bp | AGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGAGAAACTTATGCGCATGCATTTaGAGAAGCCCCTTAAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RYHFTDRLKSPEKDTQRNLCACI*RSPLSL Trigger: CAAGCTTAAGGGGCTTCTCCAAATGCATGCGCATAA...GTTTCTCTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR TCA 90 bp | TTACAAATGTTTCAGATCCTCAGATTGGCATTCATTTACACTCTGCTGTCAGCCTTCTCATCAGGCGCTTaGTCTTTTCTTCTTCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LQMFQILRLAFIYTLLSAFSSGA*SFLLQT Trigger: TGTCTGAAGAAGAAAAGATCAAGCGCCTGATGAGAA...GGCTGACAGCAGAGTGTAAATGAATGCCAATCTGAGGATCTGAAACATTTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
||
| CDS-3UTR TCA 90 bp | CTAGGAGGCAGGCCAGTAATTACAACAGGTGTTGAAAAGAGATATAGCTCATTTGATCACATCTTCATCTaGATCATCCTGGGAATCATC | + |
|
Preference number: 4 (lower is better) Translates to: LGGRPVITTGVEKRYSSFDHIFI*IILGII Trigger: GATGATTCCCAGGATGATTCAGATGAAGATGTGATC...AAATGAGCTATATCTCTTTTCAACACCTGTTGTAATTACTGGCCTGCCTCCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
||
| CDS-3UTR GCA 90 bp | TTATATGTGATCACTTTTATCAATACATATATACCGAGGCACACAGGTACAGGGAGCGGATTGGGTACTTaGGCTTTCTGGTTCTACCTA | + |
|
Preference number: 4 (lower is better) Translates to: LYVITFINTYIPRHTGTGSGLGT*AFWFYL Trigger: TAGGTAGAACCAGAAAGCGCAAGTACCCAATCCGCT...CCCTGTACCTGTGTGCCTCGGTATATATGTATTGATAAAAGTGATCACATATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033804.5 ENSMUST00000113067.8 |
||
| CDS-3UTR GCA 90 bp | TCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGAAACCTGGCCCTTGTTaGTGGTATTGTCACAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SKRYHFTDRLKSPEKDTQKPGPC*WYCHRF Trigger: AAACCTGTGACAATACCAGCAACAAGGGCCAGGTTT...CTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR GCA 90 bp | GGTTCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACAAAACCTGGCCCTTGTTaGTGGTATTGTCACAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSKRYHFTDRLKSPEKDTKPGPC*WYCHRF Trigger: AAACCTGTGACAATACCAGCAACAAGGGCCAGGTTT...TGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR CCA 90 bp | GGTTCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACAAGGACCTCATGGACTTaGCTTAGCCAGTTTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSKRYHFTDRLKSPEKDTRTSWT*LSQFSK Trigger: CTTTGAAAACTGGCTAAGCCAAGTCCATGAGGTCCT...TGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR CCA 90 bp | TCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGCTGCGACATTTAGATTaGGATTGTCAGCCTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SKRYHFTDRLKSPEKDTQLRHLD*DCQPGT Trigger: TGTTCCAGGCTGACAATCCCAATCTAAATGTCGCAG...CTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR CCA 90 bp | CACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGAGAAACAACCATTTATGCGCATGCATTTaGAGAAGCCCCTTAAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HFTDRLKSPEKDTQRNNHLCACI*RSPLSL Trigger: CAAGCTTAAGGGGCTTCTCCAAATGCATGCGCATAA...ATGGTTGTTTCTCTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR CCA 90 bp | ACCAAGGGGCTGACAATTCAGGGTGAGATTTTTCAGGTAATGCACACTTTAGTTAAATTCTCAAAAACCTaGCCCTTGTTGCTGGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: TKGLTIQGEIFQVMHTLVKFSKT*PLLLVL Trigger: CAATACCAGCAACAAGGGCCAGGTTTTTGAGAATTT...AACTAAAGTGTGCATTACCTGAAAAATCTCACCCTGAATTGTCAGCCCCTTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033804.5 ENSMUST00000113067.8 |
||
| CDS-3UTR GCA 90 bp | TCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGGGGTGCTTAAAAATTTaGCATGCGCTGTTATACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SKRYHFTDRLKSPEKDTQGCLKI*HALLYC Trigger: GCAGTATAACAGCGCATGGCAAATTTTTAAGCACCC...CTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS-3UTR GCA 90 bp | TTATATGTGATCACTTTTATCAATACATATATACCGAGGCACACAGGTACAGGGTTCTCTCCCTGTGCCTaGAGGGTGCTTAAAAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: LYVITFINTYIPRHTGTGFSPCA*RVLKNL Trigger: CAAATTTTTAAGCACCCTGCAGGCACAGGGAGAGAA...CCCTGTACCTGTGTGCCTCGGTATATATGTATTGATAAAAGTGATCACATATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033804.5 ENSMUST00000113067.8 |
||
| CDS-3UTR GCA 90 bp | CAGCACTTATATGTGATCACTTTTATCAATACATATATACCGAGGCACACAGGTTTCTCTCCCTGTGCCTaGAGGGTGCTTAAAAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: QHLYVITFINTYIPRHTGFSPCA*RVLKNL Trigger: CAAATTTTTAAGCACCCTGCAGGCACAGGGAGAGAA...ACCTGTGTGCCTCGGTATATATGTATTGATAAAAGTGATCACATATAAGTGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033804.5 ENSMUST00000113067.8 |
||
| CDS-3UTR GCA 90 bp | CACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGAGAAACAACCATTCAGGAAGGTTTTCCTaGTCATTATGCGCATGCATT | + |
|
Preference number: 4 (lower is better) Translates to: HFTDRLKSPEKDTQRNNHSGRFS*SLCACI Trigger: AATGCATGCGCATAATGAGCAGGAAAACCTTCCTGA...ATGGTTGTTTCTCTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR GCA 90 bp | TTATATGTGATCACTTTTATCAATACATATATACCGAGGCACACAGGTACAGGGAAACCTGGCCCTTGTTaGTGGTATTGTCACAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LYVITFINTYIPRHTGTGKPGPC*WYCHRF Trigger: AAACCTGTGACAATACCAGCAACAAGGGCCAGGTTT...CCCTGTACCTGTGTGCCTCGGTATATATGTATTGATAAAAGTGATCACATATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033804.5 ENSMUST00000113067.8 |
||
| CDS-3UTR TCA 90 bp | CAGCACTTATATGTGATCACTTTTATCAATACATATATACCGAGGCACACAGGTTTCTCATCAGGCGCTTaGTCTTTTCTTCTTCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: QHLYVITFINTYIPRHTGFSSGA*SFLLQT Trigger: TGTCTGAAGAAGAAAAGATCAAGCGCCTGATGAGAA...ACCTGTGTGCCTCGGTATATATGTATTGATAAAAGTGATCACATATAAGTGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033804.5 ENSMUST00000113067.8 |
||
| CDS-3UTR TCA 90 bp | TTATATGTGATCACTTTTATCAATACATATATACCGAGGCACACAGGTACAGGGGATCACATCTTCATCTaGATCATCCTGGGAATCATC | + |
|
Preference number: 4 (lower is better) Translates to: LYVITFINTYIPRHTGTGDHIFI*IILGII Trigger: GATGATTCCCAGGATGATTCAGATGAAGATGTGATC...CCCTGTACCTGTGTGCCTCGGTATATATGTATTGATAAAAGTGATCACATATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033804.5 ENSMUST00000113067.8 |
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| CDS-3UTR GCA 90 bp | CAGCACTTATATGTGATCACTTTTATCAATACATATATACCGAGGCACACAGGTTCAGGAAGGTTTTCCTaGTCATTATGCGCATGCATT | + |
|
Preference number: 4 (lower is better) Translates to: QHLYVITFINTYIPRHTGSGRFS*SLCACI Trigger: AATGCATGCGCATAATGAGCAGGAAAACCTTCCTGA...ACCTGTGTGCCTCGGTATATATGTATTGATAAAAGTGATCACATATAAGTGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033804.5 ENSMUST00000113067.8 |
||
| CDS-3UTR CCA 90 bp | GGTTCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACAAAATTCTCAAAAACCTaGCCCTTGTTGCTGGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: GSKRYHFTDRLKSPEKDTKFSKT*PLLLVL Trigger: CAATACCAGCAACAAGGGCCAGGTTTTTGAGAATTT...TGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS-3UTR GCA 90 bp | GGTTCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACTTAAAAATTTGCCATaGGCTGTTATACTGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSKRYHFTDRLKSPEKDTLKNLP*AVILLS Trigger: TGAGAGCAGTATAACAGCGCATGGCAAATTTTTAAG...TGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGAACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR GCA 90 bp | TCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGCTTAAAAATTTGCCATaGGCTGTTATACTGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKRYHFTDRLKSPEKDTQLKNLP*AVILLS Trigger: TGAGAGCAGTATAACAGCGCATGGCAAATTTTTAAG...CTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR GCA 90 bp | CACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGAGAAACAACCATCTTAAAAATTTGCCATaGGCTGTTATACTGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HFTDRLKSPEKDTQRNNHLKNLP*AVILLS Trigger: TGAGAGCAGTATAACAGCGCATGGCAAATTTTTAAG...ATGGTTGTTTCTCTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS TCA 90 bp | GCCCCTACAAGGAGCTGGTGCAGGCGAGTCCTGTTTGCCTCGCTCTaGGGAAGGACCCCTGCCTGGATAGCATTCTGTAGCTGCACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: APTRSWCRRVLFASL*GRTPAWIAFCSCTS Trigger: AGAGGTGCAGCTACAGAATGCTATCCAGGCAGGGGTCCTTCCTCAGAGCGAGGCAAACAGGACTCGCCTGCACCAGCTCCTTGTAGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS CCA 90 bp | GCTCTGCCCTCCCAGAGAACGACTGTATGTTTCTCTCTGCAATGTTaGCAATCAAAGGACCAAGGCTCCTCCCCAGGGCCCTCAGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: ALPSQRTTVCFSLQC*QSKDQGSSPGPSAW Trigger: CCATGCTGAGGGCCCTGGGGAGGAGCCTTGGTCCTTTGATTGCCAACATTGCAGAGAGAAACATACAGTCGTTCTCTGGGAGGGCAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS-3UTR CAA 90 bp | GCAAGGAATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCTTTATAGGCAGGGAGCCTaGAAAGACCACAGGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ARNDVGPCLSVAWYPSLLYRQGA*KDHRAG Trigger: GCCAGCCCTGTGGTCTTTCAAGGCTCCCTGCCTATA...AAGCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCATTCCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS GCA 90 bp | TGGCGTGGCCCTCTTCACCACAATGAGGACAGCGGATTGGGTACTTaGGCTTTCTGGTTCTACCTAGATCCCCAGGCCCGTTATTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: WRGPLHHNEDSGLGT*AFWFYLDPQARYSF Trigger: AAAGGAATAACGGGCCTGGGGATCTAGGTAGAACCAGAAAGCGCAAGTACCCAATCCGCTGTCCTCATTGTGGTGAAGAGGGCCACGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS CCA 90 bp | CCTCTTCACCACAATGAGGACAGCGGATTGGGTACTTGCGCTTTCTaGTTCTACCTAGATCCCCAGGCCCGTTATTCCTTTGCCCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PLHHNEDSGLGTCAF*FYLDPQARYSFAQN Trigger: GTTCTGGGCAAAGGAATAACGGGCCTGGGGATCTAGGTAGAACCAGAAAGCGCAAGTACCCAATCCGCTGTCCTCATTGTGGTGAAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS CCA 90 bp | TCCAGGAAGTCAGGAAGGTTTTCCTGCTCATTATGCGCATGCATTTaGAGAAGCCCCTTAAGCTTGGTGCGCAGCTCCCTACTCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRKSGRFSCSLCACI*RSPLSLVRSSLLSS Trigger: TGAGCTGAGTAGGGAGCTGCGCACCAAGCTTAAGGGGCTTCTCCAAATGCATGCGCATAATGAGCAGGAAAACCTTCCTGACTTCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS-3UTR CAA 90 bp | TTCAGACTGCAGCCGCAGAGGTATTTCATCAGACAAGAGCACTTTATGCCCTCATATAGGCAGGGAGCCTaGAAAGACCACAGGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FRLQPQRYFIRQEHFMPSYRQGA*KDHRAG Trigger: GCCAGCCCTGTGGTCTTTCAAGGCTCCCTGCCTATA...TGAGGGCATAAAGTGCTCTTGTCTGATGAAATACCTCTGCGGCTGCAGTCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
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| CDS-3UTR CAA 90 bp | GCAAGGAATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCTTCCCTTGTTGCTGGTATaGTCACAGGTTTCTTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ARNDVGPCLSVAWYPSLLPLLLV*SQVSLA Trigger: CGCCAAAGAAACCTGTGACAATACCAGCAACAAGGG...AAGCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCATTCCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS GCA 90 bp | ATCAACTCCAGGAAGTCAGGAAGGTTTTCCTGCTCATTATGCGCATaGATTTGGAGAAGCCCCTTAAGCTTGGTGCGCAGCTCCCTACTC | + |
|
Preference number: 5 (lower is better) Translates to: INSRKSGRFSCSLCA*IWRSPLSLVRSSLL Trigger: GAGTAGGGAGCTGCGCACCAAGCTTAAGGGGCTTCTCCAAATGCATGCGCATAATGAGCAGGAAAACCTTCCTGACTTCCTGGAGTTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS GCA 90 bp | ATCCTGATCAACTCCAGGAAGTCAGGAAGGTTTTCCTGCTCATTATaGGCATGCATTTGGAGAAGCCCCTTAAGCTTGGTGCGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILINSRKSGRFSCSL*ACIWRSPLSLVRSS Trigger: GGAGCTGCGCACCAAGCTTAAGGGGCTTCTCCAAATGCATGCGCATAATGAGCAGGAAAACCTTCCTGACTTCCTGGAGTTGATCAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS-3UTR CAA 90 bp | ATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCTTTTTCTTCAGGCCCGTTATTCCTTaGCCCAGAACCACTGCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: MMWAHASLLHGTPVCFFFRPVIP*PRTTAS Trigger: ACTAGCAGTGGTTCTGGGCAAAGGAATAACGGGCCT...GAAGAAAAAGCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS GCA 90 bp | TTGCGCTTTCTGGTTCTACCTAGATCCCCAGGCCCGTTATTCCTTTaGCCAGAACCACTGCTAGTGGAAGGAGACTCCTCATCAAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: LRFLVLPRSPGPLFL*PEPLLVEGDSSSKS Trigger: TGATTTTGATGAGGAGTCTCCTTCCACTAGCAGTGGTTCTGGGCAAAGGAATAACGGGCCTGGGGATCTAGGTAGAACCAGAAAGCGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR CAA 90 bp | CTAGGCACTCGAAGGCCAGATGTGAGTGCAGAATCCCCAAGAAGGCTGTATAACTCAAAAACCTGGCCCTaGTTGCTGGTATTGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LGTRRPDVSAESPRRLYNSKTWP*LLVLSQ Trigger: CTGTGACAATACCAGCAACAAGGGCCAGGTTTTTGA...GTTATACAGCCTTCTTGGGGATTCTGCACTCACATCTGGCCTTCGAGTGCCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
||
| CDS-3UTR CAA 90 bp | ATGATGTGGGCCCATGCCTCTCTGTTGCATGGTACCCCAGTTTGCTTTTTCTTCTCAAAAACCTGGCCCTaGTTGCTGGTATTGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: MMWAHASLLHGTPVCFFFSKTWP*LLVLSQ Trigger: CTGTGACAATACCAGCAACAAGGGCCAGGTTTTTGA...GAAGAAAAAGCAAACTGGGGTACCATGCAACAGAGAGGCATGGGCCCACATCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS GCA 90 bp | TCCCTTATCATCCTGATCAACTCCAGGAAGTCAGGAAGGTTTTCCTaGTCATTATGCGCATGCATTTGGAGAAGCCCCTTAAGCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLIILINSRKSGRFS*SLCACIWRSPLSLV Trigger: CACCAAGCTTAAGGGGCTTCTCCAAATGCATGCGCATAATGAGCAGGAAAACCTTCCTGACTTCCTGGAGTTGATCAGGATGATAAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR CAA 90 bp | TTCAGACTGCAGCCGCAGAGGTATTTCATCAGACAAGAGCACTTTATGCCCTCACAAAGAGCAGCTTCATaGCCCGCAAAAATTCTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: FRLQPQRYFIRQEHFMPSQRAAS*PAKILR Trigger: TCGCAGAATTTTTGCGGGCAATGAAGCTGCTCTTTG...TGAGGGCATAAAGTGCTCTTGTCTGATGAAATACCTCTGCGGCTGCAGTCTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
||
| CDS-3UTR CAA 90 bp | CCACAAGAAGAATGCTCAAAGACAGATACCAGAGGTCAGCTTCAGCTTCTGATTAGGCCCGTTATTCCTTaGCCCAGAACCACTGCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: PQEECSKTDTRGQLQLLIRPVIP*PRTTAS Trigger: ACTAGCAGTGGTTCTGGGCAAAGGAATAACGGGCCT...AATCAGAAGCTGAAGCTGACCTCTGGTATCTGTCTTTGAGCATTCTTCTTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033804.5 |
||
| CDS-3UTR CAA 90 bp | TCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGTATAGGCAGGGAGCCTaGAAAGACCACAGGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SKRYHFTDRLKSPEKDTQYRQGA*KDHRAG Trigger: GCCAGCCCTGTGGTCTTTCAAGGCTCCCTGCCTATA...CTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR CAA 90 bp | ACCAAGGGGCTGACAATTCAGGGTGAGATTTTTCAGGTAATGCACACTTTAGTTCAAAGAGCAGCTTCATaGCCCGCAAAAATTCTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: TKGLTIQGEIFQVMHTLVQRAAS*PAKILR Trigger: TCGCAGAATTTTTGCGGGCAATGAAGCTGCTCTTTG...AACTAAAGTGTGCATTACCTGAAAAATCTCACCCTGAATTGTCAGCCCCTTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033804.5 ENSMUST00000113067.8 |
||
| CDS-3UTR CAA 90 bp | GGTTCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACAAGGCCCGTTATTCCTTaGCCCAGAACCACTGCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: GSKRYHFTDRLKSPEKDTRPVIP*PRTTAS Trigger: ACTAGCAGTGGTTCTGGGCAAAGGAATAACGGGCCT...TGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR CAA 90 bp | ACCAAGGGGCTGACAATTCAGGGTGAGATTTTTCAGGTAATGCACACTTTAGTTTCAAAAACCTGGCCCTaGTTGCTGGTATTGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: TKGLTIQGEIFQVMHTLVSKTWP*LLVLSQ Trigger: CTGTGACAATACCAGCAACAAGGGCCAGGTTTTTGA...AACTAAAGTGTGCATTACCTGAAAAATCTCACCCTGAATTGTCAGCCCCTTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033804.5 ENSMUST00000113067.8 |
||
| CDS-3UTR CAA 90 bp | TCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGCCCTTGTTGCTGGTATaGTCACAGGTTTCTTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SKRYHFTDRLKSPEKDTQPLLLV*SQVSLA Trigger: CGCCAAAGAAACCTGTGACAATACCAGCAACAAGGG...CTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR CAA 90 bp | GGTTCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACCCTTGTTGCTGGTATaGTCACAGGTTTCTTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GSKRYHFTDRLKSPEKDTPLLLV*SQVSLA Trigger: CGCCAAAGAAACCTGTGACAATACCAGCAACAAGGG...TGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
||
| CDS-3UTR CAA 90 bp | GGTTCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAAAGAGCAGCTTCATaGCCCGCAAAAATTCTGCGA | + |
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Preference number: 5 (lower is better) Translates to: GSKRYHFTDRLKSPEKDTQRAAS*PAKILR Trigger: TCGCAGAATTTTTGCGGGCAATGAAGCTGCTCTTTG...TGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS-3UTR CAA 90 bp | GGTTCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACAAAAACCTGGCCCTTGTaGCTGGTATTGTCACAGGTT | + |
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Preference number: 5 (lower is better) Translates to: GSKRYHFTDRLKSPEKDTKTWPL*LVLSQV Trigger: AACCTGTGACAATACCAGCAACAAGGGCCAGGTTTT...TGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS-3UTR CAA 90 bp | CACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGAGAAACAACCATAAAACCTGGCCCTTGTaGCTGGTATTGTCACAGGTT | + |
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Preference number: 5 (lower is better) Translates to: HFTDRLKSPEKDTQRNNHKTWPL*LVLSQV Trigger: AACCTGTGACAATACCAGCAACAAGGGCCAGGTTTT...ATGGTTGTTTCTCTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS-3UTR CAA 90 bp | GGTTCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACAAGGGTGCTTAAAAATTaGCCATGCGCTGTTATACTG | + |
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Preference number: 5 (lower is better) Translates to: GSKRYHFTDRLKSPEKDTRVLKN*PCAVIL Trigger: CAGTATAACAGCGCATGGCAAATTTTTAAGCACCCT...TGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS-3UTR CAA 90 bp | TCAAAAAGGTACCACTTCACGGATAGATTAAAATCACCAGAGAAAGACACACAGAGGGTGCTTAAAAATTaGCCATGCGCTGTTATACTG | + |
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Preference number: 5 (lower is better) Translates to: SKRYHFTDRLKSPEKDTQRVLKN*PCAVIL Trigger: CAGTATAACAGCGCATGGCAAATTTTTAAGCACCCT...CTGTGTGTCTTTCTCTGGTGATTTTAATCTATCCGTGAAGTGGTACCTTTTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS GCA 72 bp | AGCCCCTACAAGGAGCTGGTGCAGGCGAGTCCTGTTTaGCTCGCTCTGAGGAAGGACCCCTGCCTGGATAGC | + |
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Preference number: 6 (lower is better) Translates to: SPYKELVQASPV*LALRKDPCLDS Trigger: GCTATCCAGGCAGGGGTCCTTCCTCAGAGCGAGGCAAACAGGACTCGCCTGCACCAGCTCCTTGTAGGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS TCA 72 bp | AGGAGCTGGTGCAGGCGAGTCCTGTTTGCCTCGCTCTaGGGAAGGACCCCTGCCTGGATAGCATTCTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: RSWCRRVLFASL*GRTPAWIAFCS Trigger: GCTACAGAATGCTATCCAGGCAGGGGTCCTTCCTCAGAGCGAGGCAAACAGGACTCGCCTGCACCAGCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS CAA 90 bp | CGCATGGCCTCCCGGGCAGGGCCCCTAAGGGTTCTCATCAGGCGCTaGATCTTTTCTTCTTCAGACATAGGCCAATCTGGCAGGACCTCA | + |
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Preference number: 6 (lower is better) Translates to: RMASRAGPLRVLIRR*IFSSSDIGQSGRTS Trigger: TGAGGTCCTGCCAGATTGGCCTATGTCTGAAGAAGAAAAGATCAAGCGCCTGATGAGAACCCTTAGGGGCCCTGCCCGGGAGGCCATGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS CAA 90 bp | AGCTCTGCCCTCCCAGAGAACGACTGTATGTTTCTCTCTGCAATGTaGGCAATCAAAGGACCAAGGCTCCTCCCCAGGGCCCTCAGCATG | + |
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Preference number: 6 (lower is better) Translates to: SSALPENDCMFLSAM*AIKGPRLLPRALSM Trigger: CATGCTGAGGGCCCTGGGGAGGAGCCTTGGTCCTTTGATTGCCAACATTGCAGAGAGAAACATACAGTCGTTCTCTGGGAGGGCAGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS GCA 72 bp | GGCCCTCAGCATGGAATGGGCAAAAGGCATAAAAGCTaGATTCTGCCGGCGACTGTTACCCATCCTAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: GPQHGMGKRHKS*ILPATVTHPSK Trigger: CTTGCTAGGATGGGTAACAGTCGCCGGCAGAATGCAGCTTTTATGCCTTTTGCCCATTCCATGCTGAGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS GCA 72 bp | CTGGTTCTACCTAGATCCCCAGGCCCGTTATTCCTTTaGCCAGAACCACTGCTAGTGGAAGGAGACTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LVLPRSPGPLFL*PEPLLVEGDSS Trigger: TGAGGAGTCTCCTTCCACTAGCAGTGGTTCTGGGCAAAGGAATAACGGGCCTGGGGATCTAGGTAGAACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS CCA 72 bp | TCCCAGAGAACGACTGTATGTTTCTCTCTGCAATGTTaGCAATCAAAGGACCAAGGCTCCTCCCCAGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SQRTTVCFSLQC*QSKDQGSSPGP Trigger: GGGCCCTGGGGAGGAGCCTTGGTCCTTTGATTGCCAACATTGCAGAGAGAAACATACAGTCGTTCTCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS CAA 72 bp | CTCCCAGAGAACGACTGTATGTTTCTCTCTGCAATGTaGGCAATCAAAGGACCAAGGCTCCTCCCCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LPENDCMFLSAM*AIKGPRLLPRA Trigger: GGCCCTGGGGAGGAGCCTTGGTCCTTTGATTGCCAACATTGCAGAGAGAAACATACAGTCGTTCTCTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS CAA 72 bp | TCATTATGCGCATGCATTTGGAGAAGCCCCTTAAGCTaGGTGCGCAGCTCCCTACTCAGCTCAGCCCCTACA | + |
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Preference number: 6 (lower is better) Translates to: SLCACIWRSPLS*VRSSLLSSAPT Trigger: TGTAGGGGCTGAGCTGAGTAGGGAGCTGCGCACCAAGCTTAAGGGGCTTCTCCAAATGCATGCGCATAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS CAA 90 bp | CTCCAGGAAGTCAGGAAGGTTTTCCTGCTCATTATGCGCATGCATTaGGAGAAGCCCCTTAAGCTTGGTGCGCAGCTCCCTACTCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LQEVRKVFLLIMRMH*EKPLKLGAQLPTQL Trigger: GAGCTGAGTAGGGAGCTGCGCACCAAGCTTAAGGGGCTTCTCCAAATGCATGCGCATAATGAGCAGGAAAACCTTCCTGACTTCCTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS GCA 72 bp | CTCTGCCCTCCCAGAGAACGACTGTATGTTTCTCTCTaGAATGTTGGCAATCAAAGGACCAAGGCTCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LCPPRERLYVSL*NVGNQRTKAPP Trigger: GGGAGGAGCCTTGGTCCTTTGATTGCCAACATTGCAGAGAGAAACATACAGTCGTTCTCTGGGAGGGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS CCA 72 bp | AAAAATTCTGCGACATTTAGATTGGGATTGTCAGCCTaGAACAAACGCATGGCCTCCCGGGCAGGGCCCCTA | + |
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Preference number: 6 (lower is better) Translates to: KNSATFRLGLSA*NKRMASRAGPL Trigger: TAGGGGCCCTGCCCGGGAGGCCATGCGTTTGTTCCAGGCTGACAATCCCAATCTAAATGTCGCAGAATTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS CAA 72 bp | GTCAGGAAGGTTTTCCTGCTCATTATGCGCATGCATTaGGAGAAGCCCCTTAAGCTTGGTGCGCAGCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: VRKVFLLIMRMH*EKPLKLGAQLP Trigger: AGGGAGCTGCGCACCAAGCTTAAGGGGCTTCTCCAAATGCATGCGCATAATGAGCAGGAAAACCTTCCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS GCA 72 bp | AGCATGGAATGGGCAAAAGGCATAAAAGCTGCATTCTaGCGGCGACTGTTACCCATCCTAGCAAGGAGGCTA | + |
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Preference number: 6 (lower is better) Translates to: SMEWAKGIKAAF*RRLLPILARRL Trigger: TAGCCTCCTTGCTAGGATGGGTAACAGTCGCCGGCAGAATGCAGCTTTTATGCCTTTTGCCCATTCCATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS CCA 72 bp | TCAGACATAGGCCAATCTGGCAGGACCTCATGGACTTaGCTTAGCCAGTTTTCAAAGGTTTCTTCCCCGGGT | + |
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Preference number: 6 (lower is better) Translates to: SDIGQSGRTSWT*LSQFSKVSSPG Trigger: ACCCGGGGAAGAAACCTTTGAAAACTGGCTAAGCCAAGTCCATGAGGTCCTGCCAGATTGGCCTATGTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS CCA 72 bp | TCAGGAAGGTTTTCCTGCTCATTATGCGCATGCATTTaGAGAAGCCCCTTAAGCTTGGTGCGCAGCTCCCTA | + |
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Preference number: 6 (lower is better) Translates to: SGRFSCSLCACI*RSPLSLVRSSL Trigger: TAGGGAGCTGCGCACCAAGCTTAAGGGGCTTCTCCAAATGCATGCGCATAATGAGCAGGAAAACCTTCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS CCA 72 bp | CACAATGAGGACAGCGGATTGGGTACTTGCGCTTTCTaGTTCTACCTAGATCCCCAGGCCCGTTATTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: HNEDSGLGTCAF*FYLDPQARYSF Trigger: AAAGGAATAACGGGCCTGGGGATCTAGGTAGAACCAGAAAGCGCAAGTACCCAATCCGCTGTCCTCATTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS GCA 72 bp | GTTTCTCTCCCTGTGCCTGCAGGGTGCTTAAAAATTTaGCATGCGCTGTTATACTGCTCTCAGACGCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: VSLPVPAGCLKI*HALLYCSQTLQ Trigger: TTGGAGCGTCTGAGAGCAGTATAACAGCGCATGGCAAATTTTTAAGCACCCTGCAGGCACAGGGAGAGAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS GCA 72 bp | CATACAGGGATGGTTTCTCTCCCTGTGCCTGCAGGGTaGTTAAAAATTTGCCATGCGCTGTTATACTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: HTGMVSLPVPAG*LKICHALLYCS Trigger: AGAGCAGTATAACAGCGCATGGCAAATTTTTAAGCACCCTGCAGGCACAGGGAGAGAAACCATCCCTGTATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS GCA 72 bp | CGGATCACATACAGGGATGGTTTCTCTCCCTGTGCCTaGAGGGTGCTTAAAAATTTGCCATGCGCTGTTATA | + |
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Preference number: 6 (lower is better) Translates to: RITYRDGFSPCA*RVLKNLPCAVI Trigger: TATAACAGCGCATGGCAAATTTTTAAGCACCCTGCAGGCACAGGGAGAGAAACCATCCCTGTATGTGATCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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| CDS CCA 72 bp | TCTTCTTCAGACATAGGCCAATCTGGCAGGACCTCATaGACTTGGCTTAGCCAGTTTTCAAAGGTTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SSSDIGQSGRTS*TWLSQFSKVSS Trigger: GGAAGAAACCTTTGAAAACTGGCTAAGCCAAGTCCATGAGGTCCTGCCAGATTGGCCTATGTCTGAAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033804.5 ENSMUST00000101227.3 ENSMUST00000113067.8 |
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