Pregenerated sensors for ZCCHC17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028772Ensembl transcript IDs: ENSMUST00000134159.3
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGAGTCCACCCACAGCCACCGCAGACAGCAGGCAGGTTGGGGCTaGTCTCTCTCTCACGGCCAGGCTCCCCTCCACAGCAGCACCCGG | + |
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Preference number: 1 (lower is better) Translates to: AESTHSHRRQQAGWG*SLSHGQAPLHSSTR Trigger: CCGGGTGCTGCTGTGGAGGGGAGCCTGGCCGTGAGAGAGAGAGCAGCCCCAACCTGCCTGCTGTCTGCGGTGGCTGTGGGTGGACTCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR CCA 90 bp | GAGGCCGCAGAGTCCACCCACAGCCACCGCAGACAGCAGGCAGGTTaGGGCTGCTCTCTCTCTCACGGCCAGGCTCCCCTCCACAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: EAAESTHSHRRQQAG*GCSLSHGQAPLHSS Trigger: GCTGCTGTGGAGGGGAGCCTGGCCGTGAGAGAGAGAGCAGCCCCAACCTGCCTGCTGTCTGCGGTGGCTGTGGGTGGACTCTGCGGCCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR CCA 90 bp | TCTCTGGTTCAGCAGTCACTGGAGTACAGGCCCTGGCTGAGGGGATaGAGGCCGCAGAGTCCACCCACAGCCACCGCAGACAGCAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: SLVQQSLEYRPWLRG*RPQSPPTATADSRQ Trigger: CTGCCTGCTGTCTGCGGTGGCTGTGGGTGGACTCTGCGGCCTCCATCCCCTCAGCCAGGGCCTGTACTCCAGTGACTGCTGAACCAGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR CCA 90 bp | CGTGGCTGCAAATCTCTGGTTCAGCAGTCACTGGAGTACAGGCCCTaGCTGAGGGGATGGAGGCCGCAGAGTCCACCCACAGCCACCGCA | + |
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Preference number: 1 (lower is better) Translates to: RGCKSLVQQSLEYRP*LRGWRPQSPPTATA Trigger: TGCGGTGGCTGTGGGTGGACTCTGCGGCCTCCATCCCCTCAGCCAGGGCCTGTACTCCAGTGACTGCTGAACCAGAGATTTGCAGCCACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR TCA 90 bp | GCTGCAAATCTCTGGTTCAGCAGTCACTGGAGTACAGGCCCTGGCTaGGGGGATGGAGGCCGCAGAGTCCACCCACAGCCACCGCAGACA | + |
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Preference number: 1 (lower is better) Translates to: AANLWFSSHWSTGPG*GDGGRRVHPQPPQT Trigger: TGTCTGCGGTGGCTGTGGGTGGACTCTGCGGCCTCCATCCCCTCAGCCAGGGCCTGTACTCCAGTGACTGCTGAACCAGAGATTTGCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR TCA 90 bp | CTCCAGCTCGGGCAGTGGCAGCCGGTTGGGACTAGAACCTTCTGCTaGAATGAAGACACTGAGCGCATGAATGCAATGGCTGCAGGGGTC | + |
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Preference number: 1 (lower is better) Translates to: LQLGQWQPVGTRTFC*NEDTERMNAMAAGV Trigger: GACCCCTGCAGCCATTGCATTCATGCGCTCAGTGTCTTCATTTCAGCAGAAGGTTCTAGTCCCAACCGGCTGCCACTGCCCGAGCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR CCA 90 bp | GAGTACAGGCTCAGGACATCAAGGTCCAGGTGTGAACAACTGTGGTaGGAGGTGACTGCTAAGAGTCGCCCACTCATGCCCAGCAAGTCC | + |
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Preference number: 1 (lower is better) Translates to: EYRLRTSRSRCEQLW*EVTAKSRPLMPSKS Trigger: GGACTTGCTGGGCATGAGTGGGCGACTCTTAGCAGTCACCTCCCACCACAGTTGTTCACACCTGGACCTTGATGTCCTGAGCCTGTACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR GCA 90 bp | GTCACTCACACTGTGACAGACAGGAAGCAGAGCAATGACCGTGGCTaGAAATCTCTGGTTCAGCAGTCACTGGAGTACAGGCCCTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: VTHTVTDRKQSNDRG*KSLVQQSLEYRPWL Trigger: CAGCCAGGGCCTGTACTCCAGTGACTGCTGAACCAGAGATTTGCAGCCACGGTCATTGCTCTGCTTCCTGTCTGTCACAGTGTGAGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR GCA 90 bp | CTATGGAAGAGAAGGTTTATGAGTAATCTCAAGAAAGCTGTGACCTaGTGGTGGCCTTGGCTTTGTGCCTCGGCTTGGCCTCTTTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: LWKRRFMSNLKKAVT*WWPWLCASAWPLSR Trigger: CCTGGAAAGAGGCCAAGCCGAGGCACAAAGCCAAGGCCACCAGCAGGTCACAGCTTTCTTGAGATTACTCATAAACCTTCTCTTCCATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR GCA 90 bp | TTCACATTCATCCTGCACAGACATTCCTGGATTTGCTGTATGGTGTaGTGTGGTCACCCTCTCTCTAGAGTACAGGCTCAGGACATCAAG | + |
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Preference number: 1 (lower is better) Translates to: FTFILHRHSWICCMV*CGHPLSRVQAQDIK Trigger: CTTGATGTCCTGAGCCTGTACTCTAGAGAGAGGGTGACCACAGCACACCATACAGCAAATCCAGGAATGTCTGTGCAGGATGAATGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR CCA 90 bp | CCAAGGTCAATAAAGCAGAACCAAGGCCACCCAGTTGTCTGTCTTTaGTCCTCCTTTCCTGTGTGTCAGGTTGAAATGAAGGCCTATAGG | + |
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Preference number: 1 (lower is better) Translates to: PRSIKQNQGHPVVCL*SSFPVCQVEMKAYR Trigger: CCTATAGGCCTTCATTTCAACCTGACACACAGGAAAGGAGGACCAAAGACAGACAACTGGGTGGCCTTGGTTCTGCTTTATTGACCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR GCA 90 bp | AGCATGGACTCCTGCAGAGGACTCCAGCTCGGGCAGTGGCAGCCGGTTGGGACTTCACTAGTGAGTCTTTaGAGGAGTCAGGGCTGCCGC | + |
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Preference number: 2 (lower is better) Translates to: SMDSCRGLQLGQWQPVGTSLVSL*RSQGCR Trigger: GCGGCAGCCCTGACTCCTGCAAAGACTCACTAGTGA...AGTCCCAACCGGCTGCCACTGCCCGAGCTGGAGTCCTCTGCAGGAGTCCATGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR TCA 90 bp | ACCTGCTGGTGGCCTTGGCTTTGTGCCTCGGCTTGGCCTCTTTCCAGGGTCTTGGGGGGAGAAGCCATCTaGGACCATGGGGACAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: TCWWPWLCASAWPLSRVLGGEAI*DHGDKS Trigger: AGACTTGTCCCCATGGTCTCAGATGGCTTCTCCCCC...CAAGACCCTGGAAAGAGGCCAAGCCGAGGCACAAAGCCAAGGCCACCAGCAGGT 60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR CCA 90 bp | CATCCTGCACAGACATTCCTGGATTTGCTGTATGGTGTGCTGTGGTCACCCTCTCCCTGGCTGAGGGGATaGAGGCCGCAGAGTCCACCC | + |
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Preference number: 2 (lower is better) Translates to: HPAQTFLDLLYGVLWSPSPWLRG*RPQSPP Trigger: GGGTGGACTCTGCGGCCTCCATCCCCTCAGCCAGGG...AGAGGGTGACCACAGCACACCATACAGCAAATCCAGGAATGTCTGTGCAGGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR CCA 90 bp | ATGGTGTGCTGTGGTCACCCTCTCTCTAGAGTACAGGCTCAGGACATCAAGGTCCTGGAGTACAGGCCCTaGCTGAGGGGATGGAGGCCG | + |
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Preference number: 2 (lower is better) Translates to: MVCCGHPLSRVQAQDIKVLEYRP*LRGWRP Trigger: CGGCCTCCATCCCCTCAGCCAGGGCCTGTACTCCAG...GACCTTGATGTCCTGAGCCTGTACTCTAGAGAGAGGGTGACCACAGCACACCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR CCA 90 bp | ACCTGCTGGTGGCCTTGGCTTTGTGCCTCGGCTTGGCCTCTTTCCAGGGTCTTGAGCCATCTGAGACCATaGGGACAAGTCTGGGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: TCWWPWLCASAWPLSRVLSHLRP*GQVWVG Trigger: TCCTACCCAGACTTGTCCCCATGGTCTCAGATGGCT...CAAGACCCTGGAAAGAGGCCAAGCCGAGGCACAAAGCCAAGGCCACCAGCAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR TCA 90 bp | GACATTCCTGGATTTGCTGTATGGTGTGCTGTGGTCACCCTCTCTCTAGAGTACAGTACAGGCCCTGGCTaGGGGGATGGAGGCCGCAGA | + |
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Preference number: 2 (lower is better) Translates to: DIPGFAVWCAVVTLSLEYSTGPG*GDGGRR Trigger: TCTGCGGCCTCCATCCCCTCAGCCAGGGCCTGTACT...GTACTCTAGAGAGAGGGTGACCACAGCACACCATACAGCAAATCCAGGAATGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR TCA 90 bp | CAACTGTGGTGGGAGGTGACTGCTAAGAGTCGCCCACTCATGCCCAGCAAGTCCCAGTCACTCACACTGTaGCAGACAGGAAGCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: QLWWEVTAKSRPLMPSKSQSLTL*QTGSRA Trigger: TGCTCTGCTTCCTGTCTGTCACAGTGTGAGTGACTG...GGACTTGCTGGGCATGAGTGGGCGACTCTTAGCAGTCACCTCCCACCACAGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR GCA 90 bp | CAACTGTGGTGGGAGGTGACTGCTAAGAGTCGCCCACTCATGCCCAGCAAGTCCCATGAATGCAATGGCTaGAGGGGTCGCTTGCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: QLWWEVTAKSRPLMPSKSHECNG*RGRLQR Trigger: CCTTTGCAAGCGACCCCTGCAGCCATTGCATTCATG...GGACTTGCTGGGCATGAGTGGGCGACTCTTAGCAGTCACCTCCCACCACAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR GCA 90 bp | CTAGAGTACAGGCTCAGGACATCAAGGTCCAGGTGTGAACAACTGTGGTGGGAGCCCCAATCTGCTTGCTaGAGGGGGAGAAGCCATCTG | + |
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Preference number: 2 (lower is better) Translates to: LEYRLRTSRSRCEQLWWEPQSAC*RGRSHL Trigger: CAGATGGCTTCTCCCCCTGCAGCAAGCAGATTGGGG...CTCCCACCACAGTTGTTCACACCTGGACCTTGATGTCCTGAGCCTGTACTCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR CCA 90 bp | GTCTGTCTTTGGTCCTCCTTTCCTGTGTGTCAGGTTGAAATGAAGGCCTATAGGCCCGGGGCTCCAGCATaGACTCCTGCAGAGGACTCC | + |
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Preference number: 2 (lower is better) Translates to: VCLWSSFPVCQVEMKAYRPGAPA*TPAEDS Trigger: GGAGTCCTCTGCAGGAGTCCATGCTGGAGCCCCGGG...CCTATAGGCCTTCATTTCAACCTGACACACAGGAAAGGAGGACCAAAGACAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR TCA 90 bp | ATGGTGTGCTGTGGTCACCCTCTCTCTAGAGTACAGGCTCAGGACATCAAGGTCATCTCAAGAAAGCTGTaGCCTGCTGGTGGCCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: MVCCGHPLSRVQAQDIKVISRKL*PAGGLG Trigger: GCCAAGGCCACCAGCAGGTCACAGCTTTCTTGAGAT...GACCTTGATGTCCTGAGCCTGTACTCTAGAGAGAGGGTGACCACAGCACACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR GCA 90 bp | GACATTCCTGGATTTGCTGTATGGTGTGCTGTGGTCACCCTCTCTCTAGAGTACAGAGTCGCCCACTCATaGCCAGCAAGTCCCCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: DIPGFAVWCAVVTLSLEYRVAHS*PASPQG Trigger: ACCCTGGGGACTTGCTGGGCATGAGTGGGCGACTCT...GTACTCTAGAGAGAGGGTGACCACAGCACACCATACAGCAAATCCAGGAATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR GCA 90 bp | AAAACTGTATCCAAAGGGTGCTCCAAGGTCAATAAAGCAGAACCAAGGCCACCCGGGCCCCAATCTGCTTaGTGCAGGGGGAGAAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: KTVSKGCSKVNKAEPRPPGPQSA*CRGRSH Trigger: ATGGCTTCTCCCCCTGCAGCAAGCAGATTGGGGCCC...GGGTGGCCTTGGTTCTGCTTTATTGACCTTGGAGCACCCTTTGGATACAGTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR CCA 90 bp | GTCTGTCTTTGGTCCTCCTTTCCTGTGTGTCAGGTTGAAATGAAGGCCTATAGGACCTGCTGGTGGCCTTaGCTTTGTGCCTCGGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: VCLWSSFPVCQVEMKAYRTCWWP*LCASAW Trigger: CCAAGCCGAGGCACAAAGCCAAGGCCACCAGCAGGT...CCTATAGGCCTTCATTTCAACCTGACACACAGGAAAGGAGGACCAAAGACAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR CCA 90 bp | TGTCTTTGGTCCTCCTTTCCTGTGTGTCAGGTTGAAATGAAGGCCTATAGGTCACCATGGGGACAAGTCTaGGTAGGAGGCAGGCCACAC | + |
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Preference number: 2 (lower is better) Translates to: CLWSSFPVCQVEMKAYRSPWGQV*VGGRPH Trigger: GTGTGGCCTGCCTCCTACCCAGACTTGTCCCCATGG...TGACCTATAGGCCTTCATTTCAACCTGACACACAGGAAAGGAGGACCAAAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR CCA 90 bp | AAAACTGTATCCAAAGGGTGCTCCAAGGTCAATAAAGCAGAACCAAGGCCACCCAGACAGCAGGCAGGTTaGGGCTGCTCTCTCTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: KTVSKGCSKVNKAEPRPPRQQAG*GCSLSH Trigger: GTGAGAGAGAGAGCAGCCCCAACCTGCCTGCTGTCT...GGGTGGCCTTGGTTCTGCTTTATTGACCTTGGAGCACCCTTTGGATACAGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR CCA 90 bp | CTGTATCCAAAGGGTGCTCCAAGGTCAATAAAGCAGAACCAAGGCCACCCAGTTCCATGGCAGAGCAGCTaGCTGTCACTGTGTGGCTAT | + |
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Preference number: 2 (lower is better) Translates to: LYPKGAPRSIKQNQGHPVPWQSS*LSLCGY Trigger: ATAGCCACACAGTGACAGCCAGCTGCTCTGCCATGG...AACTGGGTGGCCTTGGTTCTGCTTTATTGACCTTGGAGCACCCTTTGGATACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR TCA 90 bp | AATAAAGCAGAACCAAGGCCACCCAGTTGTCTGTCTTTGGTCCTCCTTTCCTGTCAGGAAGCAGAGCAATaGCCGTGGCTGCAAATCTCT | + |
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Preference number: 2 (lower is better) Translates to: NKAEPRPPSCLSLVLLSCQEAEQ*PWLQIS Trigger: AGAGATTTGCAGCCACGGTCATTGCTCTGCTTCCTG...ACAGGAAAGGAGGACCAAAGACAGACAACTGGGTGGCCTTGGTTCTGCTTTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR TCA 90 bp | AATAAAGCAGAACCAAGGCCACCCAGTTGTCTGTCTTTGGTCCTCCTTTCCTGTATCAAGGTCCAGGTGTaGACAACTGTGGTGGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: NKAEPRPPSCLSLVLLSCIKVQV*TTVVGG Trigger: ACCTCCCACCACAGTTGTTCACACCTGGACCTTGAT...ACAGGAAAGGAGGACCAAAGACAGACAACTGGGTGGCCTTGGTTCTGCTTTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR GCA 90 bp | GTTGTCTGTCTTTGGTCCTCCTTTCCTGTGTGTCAGGTTGAAATGAAGGCCTATAAGAAAGCTGTGACCTaGTGGTGGCCTTGGCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: VVCLWSSFPVCQVEMKAYKKAVT*WWPWLC Trigger: ACAAAGCCAAGGCCACCAGCAGGTCACAGCTTTCTT...ATAGGCCTTCATTTCAACCTGACACACAGGAAAGGAGGACCAAAGACAGACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR GCA 90 bp | TGTCTTTGGTCCTCCTTTCCTGTGTGTCAGGTTGAAATGAAGGCCTATAGGTCAACCCTTACACTGACCTaGCAAGGCTCAGAGAAGCTA | + |
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Preference number: 2 (lower is better) Translates to: CLWSSFPVCQVEMKAYRSTLTLT*QGSEKL Trigger: TAGCTTCTCTGAGCCTTGGCAGGTCAGTGTAAGGGT...TGACCTATAGGCCTTCATTTCAACCTGACACACAGGAAAGGAGGACCAAAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR GCA 90 bp | GTTGTCTGTCTTTGGTCCTCCTTTCCTGTGTGTCAGGTTGAAATGAAGGCCTATATTTGCTGTATGGTGTaGTGTGGTCACCCTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: VVCLWSSFPVCQVEMKAYICCMV*CGHPLS Trigger: AGAGAGAGGGTGACCACAGCACACCATACAGCAAAT...ATAGGCCTTCATTTCAACCTGACACACAGGAAAGGAGGACCAAAGACAGACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR GCA 90 bp | GTCTGTCTTTGGTCCTCCTTTCCTGTGTGTCAGGTTGAAATGAAGGCCTATAGGAGACATTCCTGGATTTaGTGTATGGTGTGCTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: VCLWSSFPVCQVEMKAYRRHSWI*CMVCCG Trigger: ACCACAGCACACCATACAGCAAATCCAGGAATGTCT...CCTATAGGCCTTCATTTCAACCTGACACACAGGAAAGGAGGACCAAAGACAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR CCA 90 bp | AATAAAGCAGAACCAAGGCCACCCAGTTGTCTGTCTTTGGTCCTCCTTTCCTGTCTGGCTGTCACTGTGTaGCTATTTCACATTCATCCT | + |
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Preference number: 2 (lower is better) Translates to: NKAEPRPPSCLSLVLLSCLAVTV*LFHIHP Trigger: AGGATGAATGTGAAATAGCCACACAGTGACAGCCAG...ACAGGAAAGGAGGACCAAAGACAGACAACTGGGTGGCCTTGGTTCTGCTTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR CCA 72 bp | GAGTCCACCCACAGCCACCGCAGACAGCAGGCAGGTTaGGGCTGCTCTCTCTCTCACGGCCAGGCTCCCCTC | + |
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Preference number: 3 (lower is better) Translates to: ESTHSHRRQQAG*GCSLSHGQAPL Trigger: GAGGGGAGCCTGGCCGTGAGAGAGAGAGCAGCCCCAACCTGCCTGCTGTCTGCGGTGGCTGTGGGTGGACTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR-3UTR CAA 90 bp | GCCAGGCTCCCCTCCACAGCAGCACCCGGGGCTCCAGCATGGACTCCTGCAGAGCTCACTAGTGAGTCTTaGCAGGAGTCAGGGCTGCCG | + |
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Preference number: 3 (lower is better) Translates to: ARLPSTAAPGAPAWTPAELTSES*QESGLP Trigger: CGGCAGCCCTGACTCCTGCAAAGACTCACTAGTGAG...CTCTGCAGGAGTCCATGCTGGAGCCCCGGGTGCTGCTGTGGAGGGGAGCCTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR GCA 72 bp | GTCATTCTAGCATCTATGCAAGCCCTTACACTGGCCTaGCCATGGCAGAGCAGCTGGCTGTCACTGTGTGGC | + |
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Preference number: 3 (lower is better) Translates to: VILASMQALTLA*PWQSSWLSLCG Trigger: GCCACACAGTGACAGCCAGCTGCTCTGCCATGGGCAGGCCAGTGTAAGGGCTTGCATAGATGCTAGAATGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR CCA 72 bp | CTCAGGACATCAAGGTCCAGGTGTGAACAACTGTGGTaGGAGGTGACTGCTAAGAGTCGCCCACTCATGCCC | + |
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Preference number: 3 (lower is better) Translates to: LRTSRSRCEQLW*EVTAKSRPLMP Trigger: GGGCATGAGTGGGCGACTCTTAGCAGTCACCTCCCACCACAGTTGTTCACACCTGGACCTTGATGTCCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR CCA 72 bp | AGTAATCTCAAGAAAGCTGTGACCTGCTGGTGGCCTTaGCTTTGTGCCTCGGCTTGGCCTCTTTCCAGGGTC | + |
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Preference number: 3 (lower is better) Translates to: SNLKKAVTCWWP*LCASAWPLSRV Trigger: GACCCTGGAAAGAGGCCAAGCCGAGGCACAAAGCCAAGGCCACCAGCAGGTCACAGCTTTCTTGAGATTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR CCA 72 bp | CTAGCATCTATGCAAGCCCTTACACTGGCCTGCCCATaGCAGAGCAGCTGGCTGTCACTGTGTGGCTATTTC | + |
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Preference number: 3 (lower is better) Translates to: LASMQALTLACP*QSSWLSLCGYF Trigger: GAAATAGCCACACAGTGACAGCCAGCTGCTCTGCCATGGGCAGGCCAGTGTAAGGGCTTGCATAGATGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR CCA 72 bp | GTGACCTGCTGGTGGCCTTGGCTTTGTGCCTCGGCTTaGCCTCTTTCCAGGGTCTTGGATAACATAGTAAGT | + |
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Preference number: 3 (lower is better) Translates to: VTCWWPWLCASA*PLSRVLDNIVS Trigger: ACTTACTATGTTATCCAAGACCCTGGAAAGAGGCCAAGCCGAGGCACAAAGCCAAGGCCACCAGCAGGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR GCA 72 bp | ACTGTGACAGACAGGAAGCAGAGCAATGACCGTGGCTaGAAATCTCTGGTTCAGCAGTCACTGGAGTACAGG | + |
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Preference number: 3 (lower is better) Translates to: TVTDRKQSNDRG*KSLVQQSLEYR Trigger: CCTGTACTCCAGTGACTGCTGAACCAGAGATTTGCAGCCACGGTCATTGCTCTGCTTCCTGTCTGTCACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR TCA 72 bp | AGTCACTCACACTGTGACAGACAGGAAGCAGAGCAATaGCCGTGGCTGCAAATCTCTGGTTCAGCAGTCACT | + |
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Preference number: 3 (lower is better) Translates to: SHSHCDRQEAEQ*PWLQISGSAVT Trigger: AGTGACTGCTGAACCAGAGATTTGCAGCCACGGTCATTGCTCTGCTTCCTGTCTGTCACAGTGTGAGTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR GCA 72 bp | AGAAGGTTTATGAGTAATCTCAAGAAAGCTGTGACCTaGTGGTGGCCTTGGCTTTGTGCCTCGGCTTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: RRFMSNLKKAVT*WWPWLCASAWP Trigger: AGGCCAAGCCGAGGCACAAAGCCAAGGCCACCAGCAGGTCACAGCTTTCTTGAGATTACTCATAAACCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR CCA 72 bp | TTTATGAGTAATCTCAAGAAAGCTGTGACCTGCTGGTaGCCTTGGCTTTGTGCCTCGGCTTGGCCTCTTTCC | + |
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Preference number: 3 (lower is better) Translates to: FMSNLKKAVTCW*PWLCASAWPLS Trigger: GGAAAGAGGCCAAGCCGAGGCACAAAGCCAAGGCCACCAGCAGGTCACAGCTTTCTTGAGATTACTCATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR CCA 72 bp | AGGTTTATGAGTAATCTCAAGAAAGCTGTGACCTGCTaGTGGCCTTGGCTTTGTGCCTCGGCTTGGCCTCTT | + |
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Preference number: 3 (lower is better) Translates to: RFMSNLKKAVTC*WPWLCASAWPL Trigger: AAGAGGCCAAGCCGAGGCACAAAGCCAAGGCCACCAGCAGGTCACAGCTTTCTTGAGATTACTCATAAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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| 3UTR GCA 72 bp | GCTGGCTGTCACTGTGTGGCTATTTCACATTCATCCTaGACAGACATTCCTGGATTTGCTGTATGGTGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: AGCHCVAISHSS*TDIPGFAVWCA Trigger: AGCACACCATACAGCAAATCCAGGAATGTCTGTGCAGGATGAATGTGAAATAGCCACACAGTGACAGCCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTTTGGTCCTCCTTTCCTGTGTGTCAGGTTGAAATGAAGGCCTATAGGTCACAGACATTCCTGGATTaGCTGTATGGTGTGCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: CLWSSFPVCQVEMKAYRSQTFLD*LYGVLW Trigger: CCACAGCACACCATACAGCAAATCCAGGAATGTCTG...TGACCTATAGGCCTTCATTTCAACCTGACACACAGGAAAGGAGGACCAAAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| 3UTR CCA 72 bp | ATAAAGCAGAACCAAGGCCACCCAGTTGTCTGTCTTTaGTCCTCCTTTCCTGTGTGTCAGGTTGAAATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: IKQNQGHPVVCL*SSFPVCQVEMK Trigger: CTTCATTTCAACCTGACACACAGGAAAGGAGGACCAAAGACAGACAACTGGGTGGCCTTGGTTCTGCTTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| 3UTR CCA 72 bp | CAGGGTTACAAATACAAGGGAAAGCGGTCATCACTATaGAAGAGAAGGTTTATGAGTAATCTCAAGAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QGYKYKGKRSSL*KRRFMSNLKKA Trigger: AGCTTTCTTGAGATTACTCATAAACCTTCTCTTCCATAGTGATGACCGCTTTCCCTTGTATTTGTAACCCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR TCA 90 bp | GCAGACAGCAGGCAGGTTGGGGCTGCTCTCTCTCTCACGGCCAGGCTCCCCTCCGGACGGCCTCAAGGGTaGTCTTCTGCCCAGTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: ADSRQVGAALSLTARLPSGRPQG*SSAQCN Trigger: ATTACACTGGGCAGAAGATCACCCTTGAGGCCGTCC...GGAGGGGAGCCTGGCCGTGAGAGAGAGAGCAGCCCCAACCTGCCTGCTGTCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR CCA 90 bp | GCCAGGCTCCCCTCCACAGCAGCACCCGGGGCTCCAGCATGGACTCCTGCAGAGCAGTCCTTGGCAAAGTaGCCTTTGCAGCCACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: ARLPSTAAPGAPAWTPAEQSLAK*PLQPHF Trigger: GAAGTGTGGCTGCAAAGGCCACTTTGCCAAGGACTG...CTCTGCAGGAGTCCATGCTGGAGCCCCGGGTGCTGCTGTGGAGGGGAGCCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| 3UTR CAA 72 bp | CCTGCAGAGGACTCCAGCTCGGGCAGTGGCAGCCGGTaGGGACTAGAACCTTCTGCTGAAATGAAGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: PAEDSSSGSGSR*GLEPSAEMKTL Trigger: CAGTGTCTTCATTTCAGCAGAAGGTTCTAGTCCCAACCGGCTGCCACTGCCCGAGCTGGAGTCCTCTGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR GCA 90 bp | CAACTGTGGTGGGAGGTGACTGCTAAGAGTCGCCCACTCATGCCCAGCAAGTCCTGGCAAAGTGGCCTTTaGAGCCACACTTCTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLWWEVTAKSRPLMPSKSWQSGL*SHTSCR Trigger: CCTGCAAGAAGTGTGGCTGCAAAGGCCACTTTGCCA...GGACTTGCTGGGCATGAGTGGGCGACTCTTAGCAGTCACCTCCCACCACAGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR CCA 90 bp | AGCATGGACTCCTGCAGAGGACTCCAGCTCGGGCAGTGGCAGCCGGTTGGGACTATACTTGGTTCCACCTaGCTGCATGAAACAGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SMDSCRGLQLGQWQPVGTILGST*LHETVL Trigger: AAGGACTGTTTCATGCAGCCAGGTGGAACCAAGTAT...AGTCCCAACCGGCTGCCACTGCCCGAGCTGGAGTCCTCTGCAGGAGTCCATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| 3UTR CAA 72 bp | TCTCAAGAAAGCTGTGACCTGCTGGTGGCCTTGGCTTaGTGCCTCGGCTTGGCCTCTTTCCAGGGTCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SQESCDLLVALA*CLGLASFQGLG Trigger: TCCAAGACCCTGGAAAGAGGCCAAGCCGAGGCACAAAGCCAAGGCCACCAGCAGGTCACAGCTTTCTTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR CCA 90 bp | AGCATGGACTCCTGCAGAGGACTCCAGCTCGGGCAGTGGCAGCCGGTTGGGACTCCTTCTTTCTCTTCCTaGAAGAATTCTTCGTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SMDSCRGLQLGQWQPVGTPSFSS*KNSSWD Trigger: ATCCCACGAAGAATTCTTCCAGGAAGAGAAAGAAGG...AGTCCCAACCGGCTGCCACTGCCCGAGCTGGAGTCCTCTGCAGGAGTCCATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR GCA 90 bp | GCTTGCAAAGGGTCAGGAGCAACAAGGGAAAATCATGTTGGGAGGGGCCCTGTGAATGCCTCGCCTTCTTaGCCGTGTCACTCTCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ACKGSGATRENHVGRGPVNASPS*PCHSQS Trigger: ACTCTGAGAGTGACACGGGCAAGAAGGCGAGGCATT...CACAGGGCCCCTCCCAACATGATTTTCCCTTGTTGCTCCTGACCCTTTGCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR TCA 90 bp | GCTTGCAAAGGGTCAGGAGCAACAAGGGAAAATCATGTTGGGAGGGGCCCTGTGTCCCAGTTCCTTGGTTaGCAACTTTCATGGAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ACKGSGATRENHVGRGPVSQFLG*QLSWRG Trigger: CCCTCTCCATGAAAGTTGTCAACCAAGGAACTGGGA...CACAGGGCCCCTCCCAACATGATTTTCCCTTGTTGCTCCTGACCCTTTGCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR CCA 90 bp | GCTTGCTGCAGGGGGAGAAGCCATCTGAGACCATGGGGACAAGTCTGGGTAGGATGGAAGAATTCTTCGTaGGATCAGGCTTCTCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ACCRGRSHLRPWGQVWVGWKNSS*DQASQV Trigger: GACTTGAGAAGCCTGATCCCACGAAGAATTCTTCCA...TCCTACCCAGACTTGTCCCCATGGTCTCAGATGGCTTCTCCCCCTGCAGCAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR TCA 90 bp | AAAACTGTATCCAAAGGGTGCTCCAAGGTCAATAAAGCAGAACCAAGGCCACCCCGACAGGACGACATGTaGGTTCGATGGACCAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: KTVSKGCSKVNKAEPRPPRQDDM*VRWTRP Trigger: AGGTCTGGTCCATCGAACTCACATGTCGTCCTGTCG...GGGTGGCCTTGGTTCTGCTTTATTGACCTTGGAGCACCCTTTGGATACAGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR GCA 90 bp | ACCTGCTGGTGGCCTTGGCTTTGTGCCTCGGCTTGGCCTCTTTCCAGGGTCTTGAAAAATAGTATACAGTaGAGGCAAGTTCTCCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: TCWWPWLCASAWPLSRVLKNSIQ*RQVLHG Trigger: ACCATGGAGAACTTGCCTGCACTGTATACTATTTTT...CAAGACCCTGGAAAGAGGCCAAGCCGAGGCACAAAGCCAAGGCCACCAGCAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR GCA 90 bp | CAAGGCTCAGAGAAGCTAGCTGTCATTCTAGCATCTATGCAAGCCCTTACACTGCGATGGACCAGACCTTaGTTCCGACAGCCTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: QGSEKLAVILASMQALTLRWTRP*FRQPGI Trigger: AATCCCAGGCTGTCGGAAGCAAGGTCTGGTCCATCG...CAGTGTAAGGGCTTGCATAGATGCTAGAATGACAGCTAGCTTCTCTGAGCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR CCA 90 bp | AGCTCGGGCAGTGGCAGCCGGTTGGGACTAGAACCTTCTGCTGAAATGAAGACATCTTTCCCAGTTCCTTaGTTGACAACTTTCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSGSGSRLGLEPSAEMKTSFPVP*LTTFME Trigger: CTCCATGAAAGTTGTCAACCAAGGAACTGGGAAAGA...TGTCTTCATTTCAGCAGAAGGTTCTAGTCCCAACCGGCTGCCACTGCCCGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR GCA 90 bp | CATCCTGCACAGACATTCCTGGATTTGCTGTATGGTGTGCTGTGGTCACCCTCTCTTCTCAAGTCCTTCTaGCTTTGCCTCCTCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HPAQTFLDLLYGVLWSPSLLKSF*LCLLFF Trigger: GAAAAAGAGGAGGCAAAGGCAGAAGGACTTGAGAAG...AGAGGGTGACCACAGCACACCATACAGCAAATCCAGGAATGTCTGTGCAGGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR TCA 90 bp | CTAGAGTACAGGCTCAGGACATCAAGGTCCAGGTGTGAACAACTGTGGTGGGAGATAGCAACCTCTCCTTaGAAAATAGTATACAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LEYRLRTSRSRCEQLWWEIATSP*KIVYSA Trigger: TGCACTGTATACTATTTTTCAAGGAGAGGTTGCTAT...CTCCCACCACAGTTGTTCACACCTGGACCTTGATGTCCTGAGCCTGTACTCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR TCA 90 bp | TCACATTCATCCTGCACAGACATTCCTGGATTTGCTGTATGGTGTGCTGTGGTCTCTCTTCTTGCTCAATaGCAACGTTGTTGGGATCGA | + |
|
Preference number: 4 (lower is better) Translates to: SHSSCTDIPGFAVWCAVVSLLAQ*QRCWDR Trigger: TCGATCCCAACAACGTTGTCATTGAGCAAGAAGAGA...GACCACAGCACACCATACAGCAAATCCAGGAATGTCTGTGCAGGATGAATGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR CCA 90 bp | AGGCTTGAAATGGAACCAGTCACTCACACTGTGACAGACAGGAAGCAGAGCAATTTGCTTCCGACAGCCTaGGATTTTGATAAAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLEMEPVTHTVTDRKQSNLLPTA*DFDKSS Trigger: GGAGCTTTTATCAAAATCCCAGGCTGTCGGAAGCAA...ATTGCTCTGCTTCCTGTCTGTCACAGTGTGAGTGACTGGTTCCATTTCAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR GCA 90 bp | TGTCTTTGGTCCTCCTTTCCTGTGTGTCAGGTTGAAATGAAGGCCTATAGGTCATCTTCTTGGTGGCCTTaGTGTCTTTTGATGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: CLWSSFPVCQVEMKAYRSSSWWP*CLLMNA Trigger: GGCATTCATCAAAAGACAGCAAGGCCACCAAGAAGA...TGACCTATAGGCCTTCATTTCAACCTGACACACAGGAAAGGAGGACCAAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR CCA 90 bp | AAAACTGTATCCAAAGGGTGCTCCAAGGTCAATAAAGCAGAACCAAGGCCACCCTCTTTTTCTTCTTGGTaGCCTTGCTGTCTTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: KTVSKGCSKVNKAEPRPPSFSSW*PCCLLM Trigger: CATCAAAAGACAGCAAGGCCACCAAGAAGAAAAAGA...GGGTGGCCTTGGTTCTGCTTTATTGACCTTGGAGCACCCTTTGGATACAGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR CAA 90 bp | AATAAAGCAGAACCAAGGCCACCCAGTTGTCTGTCTTTGGTCCTCCTTTCCTGTTCGATGGACCAGACCTaGCTTCCGACAGCCTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NKAEPRPPSCLSLVLLSCSMDQT*LPTAWD Trigger: ATCCCAGGCTGTCGGAAGCAAGGTCTGGTCCATCGA...ACAGGAAAGGAGGACCAAAGACAGACAACTGGGTGGCCTTGGTTCTGCTTTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR CAA 90 bp | AGCTCGGGCAGTGGCAGCCGGTTGGGACTAGAACCTTCTGCTGAAATGAAGACATCAATGACAACGTTGTaGGGATCGAGGTCTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSGSGSRLGLEPSAEMKTSMTTL*GSRSFP Trigger: TGGGAAAGACCTCGATCCCAACAACGTTGTCATTGA...TGTCTTCATTTCAGCAGAAGGTTCTAGTCCCAACCGGCTGCCACTGCCCGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR CAA 90 bp | GACATTCCTGGATTTGCTGTATGGTGTGCTGTGGTCACCCTCTCTCTAGAGTACTTGGCAAAGTGGCCTTaGCAGCCACACTTCTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DIPGFAVWCAVVTLSLEYLAKWP*QPHFLQ Trigger: CTGCAAGAAGTGTGGCTGCAAAGGCCACTTTGCCAA...GTACTCTAGAGAGAGGGTGACCACAGCACACCATACAGCAAATCCAGGAATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR CAA 90 bp | GTTGTCTGTCTTTGGTCCTCCTTTCCTGTGTGTCAGGTTGAAATGAAGGCCTATGAATGCCTCGCCTTCTaGCCCGTGTCACTCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VVCLWSSFPVCQVEMKAYECLAF*PVSLSE Trigger: CTCTGAGAGTGACACGGGCAAGAAGGCGAGGCATTC...ATAGGCCTTCATTTCAACCTGACACACAGGAAAGGAGGACCAAAGACAGACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR CAA 90 bp | CATCCTGCACAGACATTCCTGGATTTGCTGTATGGTGTGCTGTGGTCACCCTCTGTCTTTCCCAGTTCCTaGGTTGACAACTTTCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: HPAQTFLDLLYGVLWSPSVFPSS*VDNFHG Trigger: TCCATGAAAGTTGTCAACCAAGGAACTGGGAAAGAC...AGAGGGTGACCACAGCACACCATACAGCAAATCCAGGAATGTCTGTGCAGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR CAA 90 bp | AATAAAGCAGAACCAAGGCCACCCAGTTGTCTGTCTTTGGTCCTCCTTTCCTGTTTCCCAGTTCCTTGGTaGACAACTTTCATGGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NKAEPRPPSCLSLVLLSCFPVPW*TTFMER Trigger: CCTCTCCATGAAAGTTGTCAACCAAGGAACTGGGAA...ACAGGAAAGGAGGACCAAAGACAGACAACTGGGTGGCCTTGGTTCTGCTTTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS-3UTR CAA 90 bp | CAAGGCTCAGAGAAGCTAGCTGTCATTCTAGCATCTATGCAAGCCCTTACACTGAGCTTCACCCACACTTaGTCTCCAACATCTACTATC | + |
|
Preference number: 5 (lower is better) Translates to: QGSEKLAVILASMQALTLSFTHT*SPTSTI Trigger: GATAGTAGATGTTGGAGACAAAGTGTGGGTGAAGCT...CAGTGTAAGGGCTTGCATAGATGCTAGAATGACAGCTAGCTTCTCTGAGCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS CCA 90 bp | TGCTCAATGACAACGTTGTTGGGATCGAGGTCTTTCCCAGTTCCTTaGTTGACAACTTTCATGGAGAGGGACACTTTTATTCTATCATTT | + |
|
Preference number: 5 (lower is better) Translates to: CSMTTLLGSRSFPVP*LTTFMERDTFILSF Trigger: AAATGATAGAATAAAAGTGTCCCTCTCCATGAAAGTTGTCAACCAAGGAACTGGGAAAGACCTCGATCCCAACAACGTTGTCATTGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS TCA 72 bp | ACTTCTTGCAGGTCGTGTTCAGGACGGCCTCAAGGGTaGTCTTCTGCCCAGTGTAATCCTGGAAGGACCGTC | + |
|
Preference number: 6 (lower is better) Translates to: TSCRSCSGRPQG*SSAQCNPGRTV Trigger: GACGGTCCTTCCAGGATTACACTGGGCAGAAGATCACCCTTGAGGCCGTCCTGAACACGACCTGCAAGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS TCA 72 bp | ATCTCAGAAGGCTTATCCACTCGACAGGACGACATGTaGGTTCGATGGACCAGACCTTGCTTCCGACAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: ISEGLSTRQDDM*VRWTRPCFRQP Trigger: AGGCTGTCGGAAGCAAGGTCTGGTCCATCGAACTCACATGTCGTCCTGTCGAGTGGATAAGCCTTCTGAGAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS CAA 72 bp | GACCGTCTGCGCCTCTCTTCTTGCTCAATGACAACGTaGTTGGGATCGAGGTCTTTCCCAGTTCCTTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: DRLRLSSCSMTT*LGSRSFPVPWL Trigger: CAACCAAGGAACTGGGAAAGACCTCGATCCCAACAACGTTGTCATTGAGCAAGAAGAGAGGCGCAGACGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS CAA 72 bp | CGTCTGCGCCTCTCTTCTTGCTCAATGACAACGTTGTaGGGATCGAGGTCTTTCCCAGTTCCTTGGTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: RLRLSSCSMTTL*GSRSFPVPWLT Trigger: TGTCAACCAAGGAACTGGGAAAGACCTCGATCCCAACAACGTTGTCATTGAGCAAGAAGAGAGGCGCAGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS CCA 72 bp | GTGAGTTCGATGGACCAGACCTTGCTTCCGACAGCCTaGGATTTTGATAAAAGCTCCATAGTCTGTCACCAT | + |
|
Preference number: 6 (lower is better) Translates to: VSSMDQTLLPTA*DFDKSSIVCHH Trigger: ATGGTGACAGACTATGGAGCTTTTATCAAAATCCCAGGCTGTCGGAAGCAAGGTCTGGTCCATCGAACTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS CAA 72 bp | GACAACGTTGTTGGGATCGAGGTCTTTCCCAGTTCCTaGGTTGACAACTTTCATGGAGAGGGACACTTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: DNVVGIEVFPSS*VDNFHGEGHFY Trigger: ATAAAAGTGTCCCTCTCCATGAAAGTTGTCAACCAAGGAACTGGGAAAGACCTCGATCCCAACAACGTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS CCA 72 bp | ACAACGTTGTTGGGATCGAGGTCTTTCCCAGTTCCTTaGTTGACAACTTTCATGGAGAGGGACACTTTTATT | + |
|
Preference number: 6 (lower is better) Translates to: TTLLGSRSFPVP*LTTFMERDTFI Trigger: AATAAAAGTGTCCCTCTCCATGAAAGTTGTCAACCAAGGAACTGGGAAAGACCTCGATCCCAACAACGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS CAA 72 bp | TTTTTCATCTCTCGGCCAATCAGCTTCACCCACACTTaGTCTCCAACATCTACTATCTCAGAAGGCTTATCC | + |
|
Preference number: 6 (lower is better) Translates to: FFISRPISFTHT*SPTSTISEGLS Trigger: GGATAAGCCTTCTGAGATAGTAGATGTTGGAGACAAAGTGTGGGTGAAGCTGATTGGCCGAGAGATGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS CAA 90 bp | ATTCTATCATTTTTCATCTCTCGGCCAATCAGCTTCACCCACACTTaGTCTCCAACATCTACTATCTCAGAAGGCTTATCCACTCGACAG | + |
|
Preference number: 6 (lower is better) Translates to: ILSFFISRPISFTHT*SPTSTISEGLSTRQ Trigger: CTGTCGAGTGGATAAGCCTTCTGAGATAGTAGATGTTGGAGACAAAGTGTGGGTGAAGCTGATTGGCCGAGAGATGAAAAATGATAGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS CAA 90 bp | TTGCTCAATGACAACGTTGTTGGGATCGAGGTCTTTCCCAGTTCCTaGGTTGACAACTTTCATGGAGAGGGACACTTTTATTCTATCATT | + |
|
Preference number: 6 (lower is better) Translates to: LLNDNVVGIEVFPSS*VDNFHGEGHFYSII Trigger: AATGATAGAATAAAAGTGTCCCTCTCCATGAAAGTTGTCAACCAAGGAACTGGGAAAGACCTCGATCCCAACAACGTTGTCATTGAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
||
| CDS CAA 90 bp | TCAATGACAACGTTGTTGGGATCGAGGTCTTTCCCAGTTCCTTGGTaGACAACTTTCATGGAGAGGGACACTTTTATTCTATCATTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SMTTLLGSRSFPVPW*TTFMERDTFILSFF Trigger: GAAAAATGATAGAATAAAAGTGTCCCTCTCCATGAAAGTTGTCAACCAAGGAACTGGGAAAGACCTCGATCCCAACAACGTTGTCATTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134159.3 |
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