Pregenerated sensors for ZCCHC12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036699Ensembl transcript IDs: ENSMUST00000048067.10, ENSMUST00000115256.2, ENSMUST00000115257.8, ENSMUST00000115258.9
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCTGGGTAATTTTAAGCAGTGGGGAATaGGAACACGATCATAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: IGTKGLTIVSQGREVWVILSSGE*EHDHRS Trigger: TGACCTATGATCGTGTTCCCATTCCCCACTGCTTAA...AATTACCCAGACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| 3UTR-3UTR CCA 90 bp | TTTAGAAGGATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCTTAAGCAGTGGGGAATaGGAACACGATCATAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: FRRIGTKGLTIVSQGREVLSSGE*EHDHRS Trigger: TGACCTATGATCGTGTTCCCATTCCCCACTGCTTAA...GACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTATCCTTCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| 3UTR CCA 72 bp | CACGATCATAGGTCAGGCCACCTCTCTTTACTGTACTaGTATTCGGGACCCTTTCTCCACCCCCAAAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: HDHRSGHLSLLY*YSGPFLHPQRK Trigger: CTTTCTTTGGGGGTGGAGAAAGGGTCCCGAATACCAGTACAGTAAAGAGAGGTGGCCTGACCTATGATCGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| 3UTR-3UTR CAA 90 bp | GTTCACACAGAAAATAGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGCCAAAGAAAGCCACTTaGTGGATTTGTTCATGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: VHTENRLLSSGEWEHDHRPKKAT*WICSCN Trigger: ATTGCATGAACAAATCCACAAAGTGGCTTTCTTTGG...CCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCTATTTTCTGTGTGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| 3UTR-3UTR CAA 90 bp | ATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCTGGGTAATTCCAAAGAAAGCCACTTaGTGGATTTGTTCATGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: IGTKGLTIVSQGREVWVIPKKAT*WICSCN Trigger: ATTGCATGAACAAATCCACAAAGTGGCTTTCTTTGG...AATTACCCAGACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR TCA 90 bp | TCTCTTTACTGTACTGGTATTCGGGACCCTTTCTCCACCCCCAAAGAAAGCCACCCAAGGTGGCAGGGGTaGGTTCTGCCCCCGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SLYCTGIRDPFSTPKESHPRWQG*VLPPAA Trigger: AGCAGCCGGGGGCAGAACTCACCCCTGCCACCTTGG...GTGGCTTTCTTTGGGGGTGGAGAAAGGGTCCCGAATACCAGTACAGTAAAGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR TCA 90 bp | AGGATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCTGGGTACCAAGGTGGCAGGGGTaGGTTCTGCCCCCGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RIGTKGLTIVSQGREVWVPRWQG*VLPPAA Trigger: AGCAGCCGGGGGCAGAACTCACCCCTGCCACCTTGG...TACCCAGACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTATCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR TCA 90 bp | AGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGTCAGGCCACCTCTCTGCTCCTACCAGGAGCTaGTGCAGGCGAGCCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLLSSGEWEHDHRSGHLSAPTRS*CRRAWF Trigger: AAACCAGGCTCGCCTGCATCAGCTCCTGGTAGGAGC...AGAGAGGTGGCCTGACCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR GCA 90 bp | GGTATTCGGGACCCTTTCTCCACCCCCAAAGAAAGCCACTTTGTGGATTTGTTCCCCCTGGGCTGGCTCTaGCCTCCCAGAGAACAACCT | + |
|
Preference number: 4 (lower is better) Translates to: GIRDPFSTPKESHFVDLFPLGWL*PPREQP Trigger: AGGTTGTTCTCTGGGAGGGCAGAGCCAGCCCAGGGG...GAACAAATCCACAAAGTGGCTTTCTTTGGGGGTGGAGAAAGGGTCCCGAATACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CCA 90 bp | AGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGTCAGGCCACCTCTCTTTCTTCCCCCTGGGCTaGCTCTGCCCTCCCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RLLSSGEWEHDHRSGHLSFFPLG*LCPPRE Trigger: TTCTCTGGGAGGGCAGAGCCAGCCCAGGGGGAAGAA...AGAGAGGTGGCCTGACCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR TCA 90 bp | ATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCTGGGTAATTCCAAGGTGGCAGGGGTaGGTTCTGCCCCCGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IGTKGLTIVSQGREVWVIPRWQG*VLPPAA Trigger: AGCAGCCGGGGGCAGAACTCACCCCTGCCACCTTGG...AATTACCCAGACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR TCA 90 bp | AGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGTCAGGCCACCTCTCTGAAGGAAGAGGCACTTaGGGATGGCAGTGGTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: RLLSSGEWEHDHRSGHLSEGRGT*GWQWWV Trigger: GACCCACCACTGCCATCCTCAAGTGCCTCTTCCTTC...AGAGAGGTGGCCTGACCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR GCA 90 bp | AGGATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCTGGGTACCCCTGGGCTGGCTCTaGCCTCCCAGAGAACAACCT | + |
|
Preference number: 4 (lower is better) Translates to: RIGTKGLTIVSQGREVWVPLGWL*PPREQP Trigger: AGGTTGTTCTCTGGGAGGGCAGAGCCAGCCCAGGGG...TACCCAGACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR TCA 90 bp | CTTTACTGTACTGGTATTCGGGACCCTTTCTCCACCCCCAAAGAAAGCCACTTTGCTCCTACCAGGAGCTaGTGCAGGCGAGCCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LYCTGIRDPFSTPKESHFAPTRS*CRRAWF Trigger: AAACCAGGCTCGCCTGCATCAGCTCCTGGTAGGAGC...AAAGTGGCTTTCTTTGGGGGTGGAGAAAGGGTCCCGAATACCAGTACAGTAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR TCA 90 bp | AGGATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCTGGGTAGCTCCTACCAGGAGCTaGTGCAGGCGAGCCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RIGTKGLTIVSQGREVWVAPTRS*CRRAWF Trigger: AAACCAGGCTCGCCTGCATCAGCTCCTGGTAGGAGC...TACCCAGACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR TCA 90 bp | TCTCTTTACTGTACTGGTATTCGGGACCCTTTCTCCACCCCCAAAGAAAGCCACGAAGGAAGAGGCACTTaGGGATGGCAGTGGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLYCTGIRDPFSTPKESHEGRGT*GWQWWV Trigger: GACCCACCACTGCCATCCTCAAGTGCCTCTTCCTTC...GTGGCTTTCTTTGGGGGTGGAGAAAGGGTCCCGAATACCAGTACAGTAAAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR GCA 90 bp | AGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGTCAGGCCACCTCTCTCCTCAGATACAGCCCTaGCTAGGAAGGAAGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLLSSGEWEHDHRSGHLSPQIQP*LGRKRH Trigger: GTGCCTCTTCCTTCCTAGGCAGGGCTGTATCTGAGG...AGAGAGGTGGCCTGACCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR GCA 90 bp | GGTATTCGGGACCCTTTCTCCACCCCCAAAGAAAGCCACTTTGTGGATTTGTTCCCTTGCCCTCTCCTCTaGATGTGTCAGCTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GIRDPFSTPKESHFVDLFPCPLL*MCQLLQ Trigger: CTGCAGGAGCTGACACATGCAGAGGAGAGGGCAAGG...GAACAAATCCACAAAGTGGCTTTCTTTGGGGGTGGAGAAAGGGTCCCGAATACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CCA 90 bp | AGGATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCTGGGTATTCTTCCCCCTGGGCTaGCTCTGCCCTCCCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RIGTKGLTIVSQGREVWVFFPLG*LCPPRE Trigger: TTCTCTGGGAGGGCAGAGCCAGCCCAGGGGGAAGAA...TACCCAGACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTATCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CCA 90 bp | TTTACTGTACTGGTATTCGGGACCCTTTCTCCACCCCCAAAGAAAGCCACTTTGAAGGTTTCTTCCCCCTaGGCTGGCTCTGCCCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: FTVLVFGTLSPPPKKATLKVSSP*AGSALP Trigger: TGGGAGGGCAGAGCCAGCCCAGGGGGAAGAAACCTT...CAAAGTGGCTTTCTTTGGGGGTGGAGAAAGGGTCCCGAATACCAGTACAGTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR GCA 90 bp | GTTCACACAGAAAATAGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGCCCCTGGGCTGGCTCTaGCCTCCCAGAGAACAACCT | + |
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Preference number: 4 (lower is better) Translates to: VHTENRLLSSGEWEHDHRPLGWL*PPREQP Trigger: AGGTTGTTCTCTGGGAGGGCAGAGCCAGCCCAGGGG...CCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCTATTTTCTGTGTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR TCA 90 bp | ATCTGTCCCCACAACTTTTCCACCGTTAAACATTTAATACGGGTAAGGGTTAATCCAAGGTGGCAGGGGTaGGTTCTGCCCCCGGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: ICPHNFSTVKHLIRVRVNPRWQG*VLPPAA Trigger: AGCAGCCGGGGGCAGAACTCACCCCTGCCACCTTGG...ATTAACCCTTACCCGTATTAAATGTTTAACGGTGGAAAAGTTGTGGGGACAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR TCA 90 bp | ACAGAAAATAGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGTCAGGCGAAGGAAGAGGCACTTaGGGATGGCAGTGGTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: TENRLLSSGEWEHDHRSGEGRGT*GWQWWV Trigger: GACCCACCACTGCCATCCTCAAGTGCCTCTTCCTTC...GCCTGACCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCTATTTTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR GCA 90 bp | CTTTACTGTACTGGTATTCGGGACCCTTTCTCCACCCCCAAAGAAAGCCACTTTCCTCAGATACAGCCCTaGCTAGGAAGGAAGAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LYCTGIRDPFSTPKESHFPQIQP*LGRKRH Trigger: GTGCCTCTTCCTTCCTAGGCAGGGCTGTATCTGAGG...AAAGTGGCTTTCTTTGGGGGTGGAGAAAGGGTCCCGAATACCAGTACAGTAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR GCA 90 bp | AGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGTCAGGCCACCTCTCTGCATGTGTCAGCTCCTaGAGGGTGATGATCAGATTC | + |
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Preference number: 4 (lower is better) Translates to: RLLSSGEWEHDHRSGHLSACVSS*RVMIRF Trigger: GAATCTGATCATCACCCTGCAGGAGCTGACACATGC...AGAGAGGTGGCCTGACCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CCA 90 bp | GTTCACACAGAAAATAGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGAAGGTTTCTTCCCCCTaGGCTGGCTCTGCCCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: VHTENRLLSSGEWEHDHRKVSSP*AGSALP Trigger: TGGGAGGGCAGAGCCAGCCCAGGGGGAAGAAACCTT...CCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCTATTTTCTGTGTGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CCA 90 bp | AGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGTCAGGCCACCTCTCTATTGGGAAGGCGCTCTaGCTCATTTGCATATACCCG | + |
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Preference number: 4 (lower is better) Translates to: RLLSSGEWEHDHRSGHLSIGKAL*LICIYP Trigger: CGGGTATATGCAAATGAGCCAGAGCGCCTTCCCAAT...AGAGAGGTGGCCTGACCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR TCA 90 bp | GGTATTCGGGACCCTTTCTCCACCCCCAAAGAAAGCCACTTTGTGGATTTGTTCTGCAGTCGATACTGCTaGTCATTATTGGTGGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GIRDPFSTPKESHFVDLFCSRYC*SLLVGS Trigger: GCTCCCCACCAATAATGATCAGCAGTATCGACTGCA...GAACAAATCCACAAAGTGGCTTTCTTTGGGGGTGGAGAAAGGGTCCCGAATACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR TCA 90 bp | ATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCTGGGTAATTGAAGGAAGAGGCACTTaGGGATGGCAGTGGTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: IGTKGLTIVSQGREVWVIEGRGT*GWQWWV Trigger: GACCCACCACTGCCATCCTCAAGTGCCTCTTCCTTC...AATTACCCAGACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR GCA 90 bp | ACAGAAAATAGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGTCAGGCCCTCAGATACAGCCCTaGCTAGGAAGGAAGAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: TENRLLSSGEWEHDHRSGPQIQP*LGRKRH Trigger: GTGCCTCTTCCTTCCTAGGCAGGGCTGTATCTGAGG...GCCTGACCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCTATTTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR GCA 90 bp | GTTCACACAGAAAATAGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGCCTTGCCCTCTCCTCTaGATGTGTCAGCTCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: VHTENRLLSSGEWEHDHRPCPLL*MCQLLQ Trigger: CTGCAGGAGCTGACACATGCAGAGGAGAGGGCAAGG...CCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCTATTTTCTGTGTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR GCA 90 bp | ATCTGTCCCCACAACTTTTCCACCGTTAAACATTTAATACGGGTAAGGGTTAATCCCCTGGGCTGGCTCTaGCCTCCCAGAGAACAACCT | + |
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Preference number: 4 (lower is better) Translates to: ICPHNFSTVKHLIRVRVNPLGWL*PPREQP Trigger: AGGTTGTTCTCTGGGAGGGCAGAGCCAGCCCAGGGG...ATTAACCCTTACCCGTATTAAATGTTTAACGGTGGAAAAGTTGTGGGGACAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR GCA 90 bp | ATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCTGGGTAATTTGGGGAGCTCTGAAATaGCATAGGGCTGAGTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: IGTKGLTIVSQGREVWVIWGALK*HRAECP Trigger: AGGGCACTCAGCCCTATGGCATTTCAGAGCTCCCCA...AATTACCCAGACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR GCA 90 bp | CTTTACTGTACTGGTATTCGGGACCCTTTCTCCACCCCCAAAGAAAGCCACTTTGCATGTGTCAGCTCCTaGAGGGTGATGATCAGATTC | + |
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Preference number: 4 (lower is better) Translates to: LYCTGIRDPFSTPKESHFACVSS*RVMIRF Trigger: GAATCTGATCATCACCCTGCAGGAGCTGACACATGC...AAAGTGGCTTTCTTTGGGGGTGGAGAAAGGGTCCCGAATACCAGTACAGTAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CCA 90 bp | AGGATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCTGGGTATTCTCTCTGCCATGCTaGCCATTAAAGGGCCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: RIGTKGLTIVSQGREVWVFSLPC*PLKGQD Trigger: GTCTTGGCCCTTTAATGGCCAGCATGGCAGAGAGAA...TACCCAGACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CCA 90 bp | AGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGTCAGGCCACCTCTCTGATCACATACAGGGATaGTTTCTCTCCATGTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: RLLSSGEWEHDHRSGHLSDHIQG*FLSMFL Trigger: CAGGAACATGGAGAGAAACCATCCCTGTATGTGATC...AGAGAGGTGGCCTGACCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CCA 90 bp | AGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGTCAGGCCACCTCTCTGCTGATCATTATTGGTaGGGAGCTCTGAAATGCCAT | + |
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Preference number: 4 (lower is better) Translates to: RLLSSGEWEHDHRSGHLSADHYW*GALKCH Trigger: ATGGCATTTCAGAGCTCCCCACCAATAATGATCAGC...AGAGAGGTGGCCTGACCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CCA 90 bp | AGGATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCTGGGTATCAATGACCAGCACTTaGTCCTCAGATACAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RIGTKGLTIVSQGREVWVSMTST*SSDTAL Trigger: CAGGGCTGTATCTGAGGACCAAGTGCTGGTCATTGA...TACCCAGACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CCA 90 bp | CTTTACTGTACTGGTATTCGGGACCCTTTCTCCACCCCCAAAGAAAGCCACTTTTCAATGACCAGCACTTaGTCCTCAGATACAGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: LYCTGIRDPFSTPKESHFSMTST*SSDTAL Trigger: CAGGGCTGTATCTGAGGACCAAGTGCTGGTCATTGA...AAAGTGGCTTTCTTTGGGGGTGGAGAAAGGGTCCCGAATACCAGTACAGTAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CCA 90 bp | TTTACTGTACTGGTATTCGGGACCCTTTCTCCACCCCCAAAGAAAGCCACTTTGCCCTCCTCACCACAGTaGGAACAATGGATCGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: FTVLVFGTLSPPPKKATLPSSPQ*EQWIVC Trigger: ACATACGATCCATTGTTCCCACTGTGGTGAGGAGGG...CAAAGTGGCTTTCTTTGGGGGTGGAGAAAGGGTCCCGAATACCAGTACAGTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
||
| CDS-3UTR CCA 90 bp | CTTTACTGTACTGGTATTCGGGACCCTTTCTCCACCCCCAAAGAAAGCCACTTTCCCTCCTCACCACAGTaGGAACAATGGATCGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: LYCTGIRDPFSTPKESHFPSSPQ*EQWIVC Trigger: ACATACGATCCATTGTTCCCACTGTGGTGAGGAGGG...AAAGTGGCTTTCTTTGGGGGTGGAGAAAGGGTCCCGAATACCAGTACAGTAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
||
| CDS-3UTR TCA 90 bp | TTTGTGGATTTGTTCATGCAATTAGAAATCTGTCCCCACAACTTTTCCACCGTTGCTCCTACCAGGAGCTaGTGCAGGCGAGCCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FVDLFMQLEICPHNFSTVAPTRS*CRRAWF Trigger: AAACCAGGCTCGCCTGCATCAGCTCCTGGTAGGAGC...AACGGTGGAAAAGTTGTGGGGACAGATTTCTAATTGCATGAACAAATCCACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
||
| CDS-3UTR GCA 90 bp | CTTTACTGTACTGGTATTCGGGACCCTTTCTCCACCCCCAAAGAAAGCCACTTTAATGGATCGTATGTTTaGGCTTCCTGGCTCTACGCA | + |
|
Preference number: 4 (lower is better) Translates to: LYCTGIRDPFSTPKESHFNGSYV*ASWLYA Trigger: TGCGTAGAGCCAGGAAGCGCAAACATACGATCCATT...AAAGTGGCTTTCTTTGGGGGTGGAGAAAGGGTCCCGAATACCAGTACAGTAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CCA 90 bp | TTTGTGGATTTGTTCATGCAATTAGAAATCTGTCCCCACAACTTTTCCACCGTTAAGGTTTCTTCCCCCTaGGCTGGCTCTGCCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FVDLFMQLEICPHNFSTVKVSSP*AGSALP Trigger: TGGGAGGGCAGAGCCAGCCCAGGGGGAAGAAACCTT...AACGGTGGAAAAGTTGTGGGGACAGATTTCTAATTGCATGAACAAATCCACAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
||
| CDS-3UTR CCA 90 bp | ACAGAAAATAGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGTCAGGCTCAATGACCAGCACTTaGTCCTCAGATACAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TENRLLSSGEWEHDHRSGSMTST*SSDTAL Trigger: CAGGGCTGTATCTGAGGACCAAGTGCTGGTCATTGA...GCCTGACCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCTATTTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
||
| CDS-3UTR CCA 90 bp | AGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGTCAGGCCACCTCTCTGATCTCAAAAATGTTTaGGGACTCAATGACCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLLSSGEWEHDHRSGHLSDLKNV*GLNDQH Trigger: GTGCTGGTCATTGAGTCCCCAAACATTTTTGAGATC...AGAGAGGTGGCCTGACCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
||
| CDS-3UTR TCA 90 bp | TTTAGAAGGATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCTGCAGTCGATACTGCTaGTCATTATTGGTGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FRRIGTKGLTIVSQGREVCSRYC*SLLVGS Trigger: GCTCCCCACCAATAATGATCAGCAGTATCGACTGCA...GACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTATCCTTCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
||
| CDS-3UTR TCA 90 bp | GTTCACACAGAAAATAGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGTGCAGTCGATACTGCTaGTCATTATTGGTGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VHTENRLLSSGEWEHDHRCSRYC*SLLVGS Trigger: GCTCCCCACCAATAATGATCAGCAGTATCGACTGCA...CCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCTATTTTCTGTGTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
||
| CDS-3UTR GCA 90 bp | TTAGAAATCTGTCCCCACAACTTTTCCACCGTTAAACATTTAATACGGGTAAGGCCTTGCCCTCTCCTCTaGATGTGTCAGCTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LEICPHNFSTVKHLIRVRPCPLL*MCQLLQ Trigger: CTGCAGGAGCTGACACATGCAGAGGAGAGGGCAAGG...CCTTACCCGTATTAAATGTTTAACGGTGGAAAAGTTGTGGGGACAGATTTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CCA 90 bp | ATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCTGGGTAATTTTCTCTCTGCCATGCTaGCCATTAAAGGGCCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: IGTKGLTIVSQGREVWVIFSLPC*PLKGQD Trigger: GTCTTGGCCCTTTAATGGCCAGCATGGCAGAGAGAA...AATTACCCAGACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
||
| CDS-3UTR CCA 90 bp | GTTCACACAGAAAATAGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGATTGGGAAGGCGCTCTaGCTCATTTGCATATACCCG | + |
|
Preference number: 4 (lower is better) Translates to: VHTENRLLSSGEWEHDHRIGKAL*LICIYP Trigger: CGGGTATATGCAAATGAGCCAGAGCGCCTTCCCAAT...CCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCTATTTTCTGTGTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CCA 90 bp | TTTAGAAGGATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCATTGGGAAGGCGCTCTaGCTCATTTGCATATACCCG | + |
|
Preference number: 4 (lower is better) Translates to: FRRIGTKGLTIVSQGREVIGKAL*LICIYP Trigger: CGGGTATATGCAAATGAGCCAGAGCGCCTTCCCAAT...GACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTATCCTTCTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CCA 90 bp | AGGATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCTGGGTATTAACTCTAGGAAATTaGGAAGGCGCTCTGGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RIGTKGLTIVSQGREVWVLTLGN*EGALAH Trigger: ATGAGCCAGAGCGCCTTCCCAATTTCCTAGAGTTAA...TACCCAGACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
||
| CDS-3UTR CCA 90 bp | GTTCACACAGAAAATAGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGTCAATGACCAGCACTTaGTCCTCAGATACAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VHTENRLLSSGEWEHDHRSMTST*SSDTAL Trigger: CAGGGCTGTATCTGAGGACCAAGTGCTGGTCATTGA...CCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCTATTTTCTGTGTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR TCA 90 bp | GTTCACACAGAAAATAGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGTTCTCATTAGACGTCTaGCCTTTTCCTCCTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VHTENRLLSSGEWEHDHRFSLDV*PFPPQA Trigger: TGCCTGAGGAGGAAAAGGTCAGACGTCTAATGAGAA...CCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCTATTTTCTGTGTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
||
| CDS-3UTR TCA 90 bp | TTTACTGTACTGGTATTCGGGACCCTTTCTCCACCCCCAAAGAAAGCCACTTTGCCTCCCTTATCATCCTaGTTAACTCTAGGAAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: FTVLVFGTLSPPPKKATLPPLSS*LTLGNW Trigger: CCAATTTCCTAGAGTTAATCAGGATGATAAGGGAGG...CAAAGTGGCTTTCTTTGGGGGTGGAGAAAGGGTCCCGAATACCAGTACAGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
||
| CDS-3UTR TCA 90 bp | CTTTACTGTACTGGTATTCGGGACCCTTTCTCCACCCCCAAAGAAAGCCACTTTCCTCCCTTATCATCCTaGTTAACTCTAGGAAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LYCTGIRDPFSTPKESHFPPLSS*LTLGNW Trigger: CCAATTTCCTAGAGTTAATCAGGATGATAAGGGAGG...AAAGTGGCTTTCTTTGGGGGTGGAGAAAGGGTCCCGAATACCAGTACAGTAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR TCA 90 bp | AGGATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCTGGGTACCTCCCTTATCATCCTaGTTAACTCTAGGAAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: RIGTKGLTIVSQGREVWVPPLSS*LTLGNW Trigger: CCAATTTCCTAGAGTTAATCAGGATGATAAGGGAGG...TACCCAGACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR GCA 90 bp | TTTAGAAGGATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCAATGGATCGTATGTTTaGGCTTCCTGGCTCTACGCA | + |
|
Preference number: 4 (lower is better) Translates to: FRRIGTKGLTIVSQGREVNGSYV*ASWLYA Trigger: TGCGTAGAGCCAGGAAGCGCAAACATACGATCCATT...GACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTATCCTTCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR GCA 90 bp | ATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCTGGGTAATTAATGGATCGTATGTTTaGGCTTCCTGGCTCTACGCA | + |
|
Preference number: 4 (lower is better) Translates to: IGTKGLTIVSQGREVWVINGSYV*ASWLYA Trigger: TGCGTAGAGCCAGGAAGCGCAAACATACGATCCATT...AATTACCCAGACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CCA 90 bp | TTTAGAAGGATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCTTAACTCTAGGAAATTaGGAAGGCGCTCTGGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FRRIGTKGLTIVSQGREVLTLGN*EGALAH Trigger: ATGAGCCAGAGCGCCTTCCCAATTTCCTAGAGTTAA...GACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTATCCTTCTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CCA 90 bp | GTTCACACAGAAAATAGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGGCTGATCATTATTGGTaGGGAGCTCTGAAATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VHTENRLLSSGEWEHDHRADHYW*GALKCH Trigger: ATGGCATTTCAGAGCTCCCCACCAATAATGATCAGC...CCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCTATTTTCTGTGTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CCA 90 bp | ACAGAAAATAGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGTCAGGCGATCTCAAAAATGTTTaGGGACTCAATGACCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TENRLLSSGEWEHDHRSGDLKNV*GLNDQH Trigger: GTGCTGGTCATTGAGTCCCCAAACATTTTTGAGATC...GCCTGACCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCTATTTTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CCA 90 bp | TTTAGAAGGATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCCTAGTGGAAGGAGCCTaGATCTCAAAAATGTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FRRIGTKGLTIVSQGREVLVEGA*ISKMFG Trigger: CCCAAACATTTTTGAGATCCAGGCTCCTTCCACTAG...GACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTATCCTTCTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CCA 90 bp | ATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCTGGGTAATTCTAGTGGAAGGAGCCTaGATCTCAAAAATGTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IGTKGLTIVSQGREVWVILVEGA*ISKMFG Trigger: CCCAAACATTTTTGAGATCCAGGCTCCTTCCACTAG...AATTACCCAGACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR TCA 90 bp | TTTAGAAGGATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCCCTCCCTTATCATCCTaGTTAACTCTAGGAAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: FRRIGTKGLTIVSQGREVPPLSS*LTLGNW Trigger: CCAATTTCCTAGAGTTAATCAGGATGATAAGGGAGG...GACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTATCCTTCTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR TCA 90 bp | TTAGAAATCTGTCCCCACAACTTTTCCACCGTTAAACATTTAATACGGGTAAGGTGCAGTCGATACTGCTaGTCATTATTGGTGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LEICPHNFSTVKHLIRVRCSRYC*SLLVGS Trigger: GCTCCCCACCAATAATGATCAGCAGTATCGACTGCA...CCTTACCCGTATTAAATGTTTAACGGTGGAAAAGTTGTGGGGACAGATTTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR GCA 90 bp | TTTGTGGATTTGTTCATGCAATTAGAAATCTGTCCCCACAACTTTTCCACCGTTGCATGTGTCAGCTCCTaGAGGGTGATGATCAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: FVDLFMQLEICPHNFSTVACVSS*RVMIRF Trigger: GAATCTGATCATCACCCTGCAGGAGCTGACACATGC...AACGGTGGAAAAGTTGTGGGGACAGATTTCTAATTGCATGAACAAATCCACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CCA 90 bp | ATCTGTCCCCACAACTTTTCCACCGTTAAACATTTAATACGGGTAAGGGTTAATTTCTCTCTGCCATGCTaGCCATTAAAGGGCCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ICPHNFSTVKHLIRVRVNFSLPC*PLKGQD Trigger: GTCTTGGCCCTTTAATGGCCAGCATGGCAGAGAGAA...ATTAACCCTTACCCGTATTAAATGTTTAACGGTGGAAAAGTTGTGGGGACAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CCA 90 bp | TTAGAAATCTGTCCCCACAACTTTTCCACCGTTAAACATTTAATACGGGTAAGGCCCTCCTCACCACAGTaGGAACAATGGATCGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: LEICPHNFSTVKHLIRVRPSSPQ*EQWIVC Trigger: ACATACGATCCATTGTTCCCACTGTGGTGAGGAGGG...CCTTACCCGTATTAAATGTTTAACGGTGGAAAAGTTGTGGGGACAGATTTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
||
| CDS-3UTR GCA 90 bp | TTAGAAATCTGTCCCCACAACTTTTCCACCGTTAAACATTTAATACGGGTAAGGAATGGATCGTATGTTTaGGCTTCCTGGCTCTACGCA | + |
|
Preference number: 4 (lower is better) Translates to: LEICPHNFSTVKHLIRVRNGSYV*ASWLYA Trigger: TGCGTAGAGCCAGGAAGCGCAAACATACGATCCATT...CCTTACCCGTATTAAATGTTTAACGGTGGAAAAGTTGTGGGGACAGATTTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
||
| CDS-3UTR CCA 90 bp | TTAGAAATCTGTCCCCACAACTTTTCCACCGTTAAACATTTAATACGGGTAAGGGATCACATACAGGGATaGTTTCTCTCCATGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LEICPHNFSTVKHLIRVRDHIQG*FLSMFL Trigger: CAGGAACATGGAGAGAAACCATCCCTGTATGTGATC...CCTTACCCGTATTAAATGTTTAACGGTGGAAAAGTTGTGGGGACAGATTTCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
||
| CDS-3UTR CCA 90 bp | TTTGTGGATTTGTTCATGCAATTAGAAATCTGTCCCCACAACTTTTCCACCGTTTTAACTCTAGGAAATTaGGAAGGCGCTCTGGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FVDLFMQLEICPHNFSTVLTLGN*EGALAH Trigger: ATGAGCCAGAGCGCCTTCCCAATTTCCTAGAGTTAA...AACGGTGGAAAAGTTGTGGGGACAGATTTCTAATTGCATGAACAAATCCACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGTCCCCACAACTTTTCCACCGTTAAACATTTAATACGGGTAAGGGTTAATTTAACTCTAGGAAATTaGGAAGGCGCTCTGGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ICPHNFSTVKHLIRVRVNLTLGN*EGALAH Trigger: ATGAGCCAGAGCGCCTTCCCAATTTCCTAGAGTTAA...ATTAACCCTTACCCGTATTAAATGTTTAACGGTGGAAAAGTTGTGGGGACAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGTCCCCACAACTTTTCCACCGTTAAACATTTAATACGGGTAAGGGTTAATGCTGATCATTATTGGTaGGGAGCTCTGAAATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ICPHNFSTVKHLIRVRVNADHYW*GALKCH Trigger: ATGGCATTTCAGAGCTCCCCACCAATAATGATCAGC...ATTAACCCTTACCCGTATTAAATGTTTAACGGTGGAAAAGTTGTGGGGACAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
||
| CDS-3UTR CCA 90 bp | TTAGAAATCTGTCCCCACAACTTTTCCACCGTTAAACATTTAATACGGGTAAGGGCTGATCATTATTGGTaGGGAGCTCTGAAATGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LEICPHNFSTVKHLIRVRADHYW*GALKCH Trigger: ATGGCATTTCAGAGCTCCCCACCAATAATGATCAGC...CCTTACCCGTATTAAATGTTTAACGGTGGAAAAGTTGTGGGGACAGATTTCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGTCCCCACAACTTTTCCACCGTTAAACATTTAATACGGGTAAGGGTTAATCTAGTGGAAGGAGCCTaGATCTCAAAAATGTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ICPHNFSTVKHLIRVRVNLVEGA*ISKMFG Trigger: CCCAAACATTTTTGAGATCCAGGCTCCTTCCACTAG...ATTAACCCTTACCCGTATTAAATGTTTAACGGTGGAAAAGTTGTGGGGACAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
||
| CDS-3UTR CCA 90 bp | ATCTGTCCCCACAACTTTTCCACCGTTAAACATTTAATACGGGTAAGGGTTAATGATCTCAAAAATGTTTaGGGACTCAATGACCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ICPHNFSTVKHLIRVRVNDLKNV*GLNDQH Trigger: GTGCTGGTCATTGAGTCCCCAAACATTTTTGAGATC...ATTAACCCTTACCCGTATTAAATGTTTAACGGTGGAAAAGTTGTGGGGACAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
||
| CDS-3UTR CCA 90 bp | TTTGTGGATTTGTTCATGCAATTAGAAATCTGTCCCCACAACTTTTCCACCGTTGATCTCAAAAATGTTTaGGGACTCAATGACCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FVDLFMQLEICPHNFSTVDLKNV*GLNDQH Trigger: GTGCTGGTCATTGAGTCCCCAAACATTTTTGAGATC...AACGGTGGAAAAGTTGTGGGGACAGATTTCTAATTGCATGAACAAATCCACAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS GCA 90 bp | CTGGCTCTGCCCTCCCAGAGAACAACCTCATGTTTCTCTCTGCCATaGTGGCCATTAAAGGGCCAAGACTCCTCCCCAGGGATCTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: LALPSQRTTSCFSLP*WPLKGQDSSPGISA Trigger: TGCTGAGATCCCTGGGGAGGAGTCTTGGCCCTTTAATGGCCAGCATGGCAGAGAGAAACATGAGGTTGTTCTCTGGGAGGGCAGAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS CCA 90 bp | GCTCTGCCCTCCCAGAGAACAACCTCATGTTTCTCTCTGCCATGCTaGCCATTAAAGGGCCAAGACTCCTCCCCAGGGATCTCAGCATGG | + |
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Preference number: 5 (lower is better) Translates to: ALPSQRTTSCFSLPC*PLKGQDSSPGISAW Trigger: CCATGCTGAGATCCCTGGGGAGGAGTCTTGGCCCTTTAATGGCCAGCATGGCAGAGAGAAACATGAGGTTGTTCTCTGGGAGGGCAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS GCA 90 bp | GCCTCTCTCTCAGCAAACACCCCTGCCTGGATAGCATTCTGCAGCTaGACCTCTAAACGGATCACATACAGGGATGGTTTCTCTCCATGT | + |
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Preference number: 5 (lower is better) Translates to: ASLSANTPAWIAFCS*TSKRITYRDGFSPC Trigger: ACATGGAGAGAAACCATCCCTGTATGTGATCCGTTTAGAGGTGCAGCTGCAGAATGCTATCCAGGCAGGGGTGTTTGCTGAGAGAGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS CCA 90 bp | AGTTACTTGGCTCAGCCAGTTTTCAAAGGTTTCTTCCCCCTGGGCTaGCTCTGCCCTCCCAGAGAACAACCTCATGTTTCTCTCTGCCAT | + |
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Preference number: 5 (lower is better) Translates to: SYLAQPVFKGFFPLG*LCPPREQPHVSLCH Trigger: ATGGCAGAGAGAAACATGAGGTTGTTCTCTGGGAGGGCAGAGCCAGCCCAGGGGGAAGAAACCTTTGAAAACTGGCTGAGCCAAGTAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CAA 90 bp | TTTACTGTACTGGTATTCGGGACCCTTTCTCCACCCCCAAAGAAAGCCACTTTGGCCAGGATTGGCAGCTaGGAGCAAACGCATGACCTC | + |
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Preference number: 5 (lower is better) Translates to: FTVLVFGTLSPPPKKATLARIGS*EQTHDL Trigger: GAGGTCATGCGTTTGCTCCAAGCTGCCAATCCTGGC...CAAAGTGGCTTTCTTTGGGGGTGGAGAAAGGGTCCCGAATACCAGTACAGTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CAA 90 bp | CTTTACTGTACTGGTATTCGGGACCCTTTCTCCACCCCCAAAGAAAGCCACTTTGCCAGGATTGGCAGCTaGGAGCAAACGCATGACCTC | + |
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Preference number: 5 (lower is better) Translates to: LYCTGIRDPFSTPKESHFARIGS*EQTHDL Trigger: GAGGTCATGCGTTTGCTCCAAGCTGCCAATCCTGGC...AAAGTGGCTTTCTTTGGGGGTGGAGAAAGGGTCCCGAATACCAGTACAGTAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CAA 90 bp | AGGATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCTGGGTAGCAGGCGAGCCTGGTTaGCCTCTCTCTCAGCAAACA | + |
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Preference number: 5 (lower is better) Translates to: RIGTKGLTIVSQGREVWVAGEPG*PLSQQT Trigger: TGTTTGCTGAGAGAGAGGCAAACCAGGCTCGCCTGC...TACCCAGACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTATCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS GCA 90 bp | TGGTTTGCCTCTCTCTCAGCAAACACCCCTGCCTGGATAGCATTCTaGAGCTGCACCTCTAAACGGATCACATACAGGGATGGTTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: WFASLSANTPAWIAF*SCTSKRITYRDGFS Trigger: AGAGAAACCATCCCTGTATGTGATCCGTTTAGAGGTGCAGCTGCAGAATGCTATCCAGGCAGGGGTGTTTGCTGAGAGAGAGGCAAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CAA 90 bp | TTTAGAAGGATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCGCCAGGATTGGCAGCTaGGAGCAAACGCATGACCTC | + |
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Preference number: 5 (lower is better) Translates to: FRRIGTKGLTIVSQGREVARIGS*EQTHDL Trigger: GAGGTCATGCGTTTGCTCCAAGCTGCCAATCCTGGC...GACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTATCCTTCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CAA 90 bp | GTTCACACAGAAAATAGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGGCAGGCGAGCCTGGTTaGCCTCTCTCTCAGCAAACA | + |
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Preference number: 5 (lower is better) Translates to: VHTENRLLSSGEWEHDHRAGEPG*PLSQQT Trigger: TGTTTGCTGAGAGAGAGGCAAACCAGGCTCGCCTGC...CCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCTATTTTCTGTGTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CAA 90 bp | AGGATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCTGGGTACTCAATGACCAGCACTaGGTCCTCAGATACAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: RIGTKGLTIVSQGREVWVLNDQH*VLRYSP Trigger: AGGGCTGTATCTGAGGACCAAGTGCTGGTCATTGAG...TACCCAGACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CAA 90 bp | GGTATTCGGGACCCTTTCTCCACCCCCAAAGAAAGCCACTTTGTGGATTTGTTCATTAACTCTAGGAAATaGGGAAGGCGCTCTGGCTCA | + |
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Preference number: 5 (lower is better) Translates to: GIRDPFSTPKESHFVDLFINSRK*GRRSGS Trigger: TGAGCCAGAGCGCCTTCCCAATTTCCTAGAGTTAAT...GAACAAATCCACAAAGTGGCTTTCTTTGGGGGTGGAGAAAGGGTCCCGAATACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CAA 90 bp | TCTCTTTACTGTACTGGTATTCGGGACCCTTTCTCCACCCCCAAAGAAAGCCACATTAACTCTAGGAAATaGGGAAGGCGCTCTGGCTCA | + |
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Preference number: 5 (lower is better) Translates to: SLYCTGIRDPFSTPKESHINSRK*GRRSGS Trigger: TGAGCCAGAGCGCCTTCCCAATTTCCTAGAGTTAAT...GTGGCTTTCTTTGGGGGTGGAGAAAGGGTCCCGAATACCAGTACAGTAAAGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CAA 90 bp | GTTCACACAGAAAATAGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGCTCAATGACCAGCACTaGGTCCTCAGATACAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: VHTENRLLSSGEWEHDHRLNDQH*VLRYSP Trigger: AGGGCTGTATCTGAGGACCAAGTGCTGGTCATTGAG...CCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCTATTTTCTGTGTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CAA 90 bp | ATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCTGGGTAATTCAATGGATCGTATGTTaGCGCTTCCTGGCTCTACGC | + |
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Preference number: 5 (lower is better) Translates to: IGTKGLTIVSQGREVWVIQWIVC*RFLALR Trigger: GCGTAGAGCCAGGAAGCGCAAACATACGATCCATTG...AATTACCCAGACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CAA 90 bp | GTTCACACAGAAAATAGACTGTTAAGCAGTGGGGAATGGGAACACGATCATAGGCAATGGATCGTATGTTaGCGCTTCCTGGCTCTACGC | + |
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Preference number: 5 (lower is better) Translates to: VHTENRLLSSGEWEHDHRQWIVC*RFLALR Trigger: GCGTAGAGCCAGGAAGCGCAAACATACGATCCATTG...CCTATGATCGTGTTCCCATTCCCCACTGCTTAACAGTCTATTTTCTGTGTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CAA 90 bp | TTTAGAAGGATAGGCACCAAAGGGCTGACAATTGTTTCACAAGGTAGAGAGGTCATTAACTCTAGGAAATaGGGAAGGCGCTCTGGCTCA | + |
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Preference number: 5 (lower is better) Translates to: FRRIGTKGLTIVSQGREVINSRK*GRRSGS Trigger: TGAGCCAGAGCGCCTTCCCAATTTCCTAGAGTTAAT...GACCTCTCTACCTTGTGAAACAATTGTCAGCCCTTTGGTGCCTATCCTTCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CAA 90 bp | ATCTGTCCCCACAACTTTTCCACCGTTAAACATTTAATACGGGTAAGGGTTAATCTCAATGACCAGCACTaGGTCCTCAGATACAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: ICPHNFSTVKHLIRVRVNLNDQH*VLRYSP Trigger: AGGGCTGTATCTGAGGACCAAGTGCTGGTCATTGAG...ATTAACCCTTACCCGTATTAAATGTTTAACGGTGGAAAAGTTGTGGGGACAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CAA 90 bp | TTAGAAATCTGTCCCCACAACTTTTCCACCGTTAAACATTTAATACGGGTAAGGCTCAATGACCAGCACTaGGTCCTCAGATACAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: LEICPHNFSTVKHLIRVRLNDQH*VLRYSP Trigger: AGGGCTGTATCTGAGGACCAAGTGCTGGTCATTGAG...CCTTACCCGTATTAAATGTTTAACGGTGGAAAAGTTGTGGGGACAGATTTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS-3UTR CAA 90 bp | ATCTGTCCCCACAACTTTTCCACCGTTAAACATTTAATACGGGTAAGGGTTAATCAATGGATCGTATGTTaGCGCTTCCTGGCTCTACGC | + |
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Preference number: 5 (lower is better) Translates to: ICPHNFSTVKHLIRVRVNQWIVC*RFLALR Trigger: GCGTAGAGCCAGGAAGCGCAAACATACGATCCATTG...ATTAACCCTTACCCGTATTAAATGTTTAACGGTGGAAAAGTTGTGGGGACAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS TCA 90 bp | ACCTCTAAACGGATCACATACAGGGATGGTTTCTCTCCATGTTCCTaGACAGTGTTAACAAATTTACTATGGGCTGTCACACTGCTCTCA | + |
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Preference number: 5 (lower is better) Translates to: TSKRITYRDGFSPCS*TVLTNLLWAVTLLS Trigger: TGAGAGCAGTGTGACAGCCCATAGTAAATTTGTTAACACTGTTCAGGAACATGGAGAGAAACCATCCCTGTATGTGATCCGTTTAGAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS CAA 72 bp | CCTCAGATACAGCCCTGCCTAGGAAGGAAGAGGCACTaGAGGATGGCAGTGGTGGGTCCTCAGGCTCCACCA | + |
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Preference number: 6 (lower is better) Translates to: PQIQPCLGRKRH*RMAVVGPQAPP Trigger: TGGTGGAGCCTGAGGACCCACCACTGCCATCCTCAAGTGCCTCTTCCTTCCTAGGCAGGGCTGTATCTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS CAA 90 bp | GCACTTGGTCCTCAGATACAGCCCTGCCTAGGAAGGAAGAGGCACTaGAGGATGGCAGTGGTGGGTCCTCAGGCTCCACCAAGATCACAT | + |
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Preference number: 6 (lower is better) Translates to: ALGPQIQPCLGRKRH*RMAVVGPQAPPRSH Trigger: ATGTGATCTTGGTGGAGCCTGAGGACCCACCACTGCCATCCTCAAGTGCCTCTTCCTTCCTAGGCAGGGCTGTATCTGAGGACCAAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS GCA 72 bp | CCCTCCCAGAGAACAACCTCATGTTTCTCTCTGCCATaGTGGCCATTAAAGGGCCAAGACTCCTCCCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PSQRTTSCFSLP*WPLKGQDSSPG Trigger: CCCTGGGGAGGAGTCTTGGCCCTTTAATGGCCAGCATGGCAGAGAGAAACATGAGGTTGTTCTCTGGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS CCA 72 bp | GCCTGGTTTGCCTCTCTCTCAGCAAACACCCCTGCCTaGATAGCATTCTGCAGCTGCACCTCTAAACGGATC | + |
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Preference number: 6 (lower is better) Translates to: AWFASLSANTPA*IAFCSCTSKRI Trigger: GATCCGTTTAGAGGTGCAGCTGCAGAATGCTATCCAGGCAGGGGTGTTTGCTGAGAGAGAGGCAAACCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS CCA 72 bp | TCCCAGAGAACAACCTCATGTTTCTCTCTGCCATGCTaGCCATTAAAGGGCCAAGACTCCTCCCCAGGGATC | + |
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Preference number: 6 (lower is better) Translates to: SQRTTSCFSLPC*PLKGQDSSPGI Trigger: GATCCCTGGGGAGGAGTCTTGGCCCTTTAATGGCCAGCATGGCAGAGAGAAACATGAGGTTGTTCTCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS GCA 72 bp | TCAGCAAACACCCCTGCCTGGATAGCATTCTGCAGCTaGACCTCTAAACGGATCACATACAGGGATGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: SANTPAWIAFCS*TSKRITYRDGF Trigger: GAAACCATCCCTGTATGTGATCCGTTTAGAGGTGCAGCTGCAGAATGCTATCCAGGCAGGGGTGTTTGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS GCA 72 bp | TCTCTCTCAGCAAACACCCCTGCCTGGATAGCATTCTaGAGCTGCACCTCTAAACGGATCACATACAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: SLSANTPAWIAF*SCTSKRITYRD Trigger: ATCCCTGTATGTGATCCGTTTAGAGGTGCAGCTGCAGAATGCTATCCAGGCAGGGGTGTTTGCTGAGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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| CDS CCA 72 bp | ATCTCAAAAATGTTTGGGGACTCAATGACCAGCACTTaGTCCTCAGATACAGCCCTGCCTAGGAAGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: ISKMFGDSMTST*SSDTALPRKEE Trigger: CTCTTCCTTCCTAGGCAGGGCTGTATCTGAGGACCAAGTGCTGGTCATTGAGTCCCCAAACATTTTTGAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048067.10 ENSMUST00000115256.2 ENSMUST00000115257.8 ENSMUST00000115258.9 |
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