Pregenerated sensors for ZC4H2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035062Ensembl transcript IDs: ENSMUST00000044382.7, ENSMUST00000119640.8, ENSMUST00000120620.8
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGTCCCTGCAGAACCCAAGGCAAAAACAGAGGGAAGGAAATCACTaGAGCCTTTTTCCAAAGCAAGGCATGGAGCTCCTCCAGTCTTTA | + |
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Preference number: 1 (lower is better) Translates to: LSLQNPRQKQREGNH*SLFPKQGMELLQSL Trigger: TAAAGACTGGAGGAGCTCCATGCCTTGCTTTGGAAAAAGGCTTCAGTGATTTCCTTCCCTCTGTTTTTGCCTTGGGTTCTGCAGGGACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| 3UTR CCA 90 bp | AACAGAGGGAAGGAAATCACTGAAGCCTTTTTCCAAAGCAAGGCATaGAGCTCCTCCAGTCTTTACACCCTACAGCTCATTAGACTCCAG | + |
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Preference number: 1 (lower is better) Translates to: NRGKEITEAFFQSKA*SSSSLYTLQLIRLQ Trigger: CTGGAGTCTAATGAGCTGTAGGGTGTAAAGACTGGAGGAGCTCCATGCCTTGCTTTGGAAAAAGGCTTCAGTGATTTCCTTCCCTCTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGAAGCCTTTTTCCAAAGCAAGGCATGGAGCTCCTCCAGTCTTTACACCCTAGGAGAGAAGGGGTCATaGGTCCCAGTGATTAGCACC | + |
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Preference number: 2 (lower is better) Translates to: TEAFFQSKAWSSSSLYTLGEKGS*VPVIST Trigger: GGTGCTAATCACTGGGACTCATGACCCCTTCTCTCC...TAGGGTGTAAAGACTGGAGGAGCTCCATGCCTTGCTTTGGAAAAAGGCTTCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGAAGCCTTTTTCCAAAGCAAGGCATGGAGCTCCTCCAGTCTTTACACCCTAGGTCATGAGTCCCAGTaGTTAGCACCCAAAGCACAG | + |
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Preference number: 2 (lower is better) Translates to: TEAFFQSKAWSSSSLYTLGHESQ*LAPKAQ Trigger: CTGTGCTTTGGGTGCTAATCACTGGGACTCATGACC...TAGGGTGTAAAGACTGGAGGAGCTCCATGCCTTGCTTTGGAAAAAGGCTTCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGAAGCCTTTTTCCAAAGCAAGGCATGGAGCTCCTCCAGTCTTTACACCCTACTTTTTGGGGTTCCGTaGCCGACTCTTGGCTTTGCA | + |
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Preference number: 2 (lower is better) Translates to: TEAFFQSKAWSSSSLYTLLFGVP*PTLGFA Trigger: TGCAAAGCCAAGAGTCGGTCACGGAACCCCAAAAAG...TAGGGTGTAAAGACTGGAGGAGCTCCATGCCTTGCTTTGGAAAAAGGCTTCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000120620.8 |
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| 3UTR CAA 90 bp | AGAGGTCTATCCCTCCACCTTCTCTTCATTCATCTTGCTTCCGTTTaGGCTTTTTGGGGTTCCGTGACCGACTCTTGGCTTTGCAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: RGLSLHLLFIHLASV*AFWGSVTDSWLCKE Trigger: CTCTTTGCAAAGCCAAGAGTCGGTCACGGAACCCCAAAAAGCCAAAACGGAAGCAAGATGAATGAAGAGAAGGTGGAGGGATAGACCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120620.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGAAGCCTTTTTCCAAAGCAAGGCATGGAGCTCCTCCAGTCTTTACACCCTATCCGTGACCGACTCTTaGCTTTGCAAAGAGGGCATA | + |
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Preference number: 2 (lower is better) Translates to: TEAFFQSKAWSSSSLYTLSVTDS*LCKEGI Trigger: TATGCCCTCTTTGCAAAGCCAAGAGTCGGTCACGGA...TAGGGTGTAAAGACTGGAGGAGCTCCATGCCTTGCTTTGGAAAAAGGCTTCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120620.8 |
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| 3UTR-3UTR TCA 90 bp | GATGTGGGGCATGGAGAGCTTAAGTGTCTTTTATTTGTGGAAGAAAGGTCACCTGGTCATGAGTCCCAGTaGTTAGCACCCAAAGCACAG | + |
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Preference number: 2 (lower is better) Translates to: DVGHGELKCLLFVEERSPGHESQ*LAPKAQ Trigger: CTGTGCTTTGGGTGCTAATCACTGGGACTCATGACC...AGGTGACCTTTCTTCCACAAATAAAAGACACTTAAGCTCTCCATGCCCCACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| 3UTR-3UTR TCA 90 bp | TACAGCAAAAATAAAGTAGTTGTCCCTGCAGAACCCAAGGCAAAAACAGAGGGAGGAGAGAAGGGGTCATaGGTCCCAGTGATTAGCACC | + |
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Preference number: 2 (lower is better) Translates to: YSKNKVVVPAEPKAKTEGGEKGS*VPVIST Trigger: GGTGCTAATCACTGGGACTCATGACCCCTTCTCTCC...TCCCTCTGTTTTTGCCTTGGGTTCTGCAGGGACAACTACTTTATTTTTGCTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| 3UTR-3UTR TCA 90 bp | GGCATGGAGAGCTTAAGTGTCTTTTATTTGTGGAAGAAAGGTCACCTACATAACGGAGAGAAGGGGTCATaGGTCCCAGTGATTAGCACC | + |
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Preference number: 2 (lower is better) Translates to: GMESLSVFYLWKKGHLHNGEKGS*VPVIST Trigger: GGTGCTAATCACTGGGACTCATGACCCCTTCTCTCC...GTTATGTAGGTGACCTTTCTTCCACAAATAAAAGACACTTAAGCTCTCCATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| 3UTR-3UTR CCA 90 bp | GATGTGGGGCATGGAGAGCTTAAGTGTCTTTTATTTGTGGAAGAAAGGTCACCTTTCCAAAGCAAGGCATaGAGCTCCTCCAGTCTTTAC | + |
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Preference number: 2 (lower is better) Translates to: DVGHGELKCLLFVEERSPFQSKA*SSSSLY Trigger: GTAAAGACTGGAGGAGCTCCATGCCTTGCTTTGGAA...AGGTGACCTTTCTTCCACAAATAAAAGACACTTAAGCTCTCCATGCCCCACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| 3UTR-3UTR CCA 90 bp | GATGTGGGGCATGGAGAGCTTAAGTGTCTTTTATTTGTGGAAGAAAGGTCACCTGTGACTCTTGTGGCATaGGTCTTGGTCCCTAATTTC | + |
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Preference number: 2 (lower is better) Translates to: DVGHGELKCLLFVEERSPVTLVA*VLVPNF Trigger: GAAATTAGGGACCAAGACCCATGCCACAAGAGTCAC...AGGTGACCTTTCTTCCACAAATAAAAGACACTTAAGCTCTCCATGCCCCACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| 3UTR-3UTR CCA 90 bp | ACCACAGCAATAAGACCCAGTATTTTAGGCAGTGAACTAGGTGACTCTTGTGGCCATTCAGTTCCAAACTaGGGCAGTAAGAGAAATGTG | + |
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Preference number: 2 (lower is better) Translates to: TTAIRPSILGSELGDSCGHSVPN*GSKRNV Trigger: CACATTTCTCTTACTGCCCCAGTTTGGAACTGAATG...GCCACAAGAGTCACCTAGTTCACTGCCTAAAATACTGGGTCTTATTGCTGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| 3UTR-3UTR CCA 90 bp | GCGATTCTGAAGATGCCCTGTCTGGTATGTAAGAACTTCAGTATAACTGGAAGATTCCAAAGCAAGGCATaGAGCTCCTCCAGTCTTTAC | + |
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Preference number: 2 (lower is better) Translates to: AILKMPCLVCKNFSITGRFQSKA*SSSSLY Trigger: GTAAAGACTGGAGGAGCTCCATGCCTTGCTTTGGAA...TCTTCCAGTTATACTGAAGTTCTTACATACCAGACAGGGCATCTTCAGAATCGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| 3UTR-3UTR GCA 90 bp | GATGTGGGGCATGGAGAGCTTAAGTGTCTTTTATTTGTGGAAGAAAGGTCACCTTCTCTTCATTCATCTTaGTTCCGTTTTGGCTTTTTG | + |
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Preference number: 2 (lower is better) Translates to: DVGHGELKCLLFVEERSPSLHSS*FRFGFL Trigger: CAAAAAGCCAAAACGGAAGCAAGATGAATGAAGAGA...AGGTGACCTTTCTTCCACAAATAAAAGACACTTAAGCTCTCCATGCCCCACATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000120620.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGTATGTAAGAACTTCAGTATAACTGGAAGACTTGAGTGGAACTATAGAATAAGGGAAGGAAATCACTaGAGCCTTTTTCCAAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: LVCKNFSITGRLEWNYRIREGNH*SLFPKQ Trigger: TTGCTTTGGAAAAAGGCTTCAGTGATTTCCTTCCCT...TATTCTATAGTTCCACTCAAGTCTTCCAGTTATACTGAAGTTCTTACATACCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| 3UTR-3UTR CCA 90 bp | AATGATTGGCATTCATATAACACTATGTCCCTTTCTATCCTCAGAATGATAGACCATTCAGTTCCAAACTaGGGCAGTAAGAGAAATGTG | + |
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Preference number: 2 (lower is better) Translates to: NDWHSYNTMSLSILRMIDHSVPN*GSKRNV Trigger: CACATTTCTCTTACTGCCCCAGTTTGGAACTGAATG...GTCTATCATTCTGAGGATAGAAAGGGACATAGTGTTATATGAATGCCAATCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| 3UTR-3UTR CCA 90 bp | GGCATGGAGAGCTTAAGTGTCTTTTATTTGTGGAAGAAAGGTCACCTACATAACAGTGTCTTTTATTTGTaGAAGAAAGGTCACCTACAT | + |
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Preference number: 2 (lower is better) Translates to: GMESLSVFYLWKKGHLHNSVFYL*KKGHLH Trigger: ATGTAGGTGACCTTTCTTCCACAAATAAAAGACACT...GTTATGTAGGTGACCTTTCTTCCACAAATAAAAGACACTTAAGCTCTCCATGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| 3UTR-3UTR GCA 90 bp | ATTCTGAAGATGCCCTGTCTGGTATGTAAGAACTTCAGTATAACTGGAAGACTTATTGAGAAAGATATATaGATCAGCCCATTAGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: ILKMPCLVCKNFSITGRLIEKDI*ISPLGS Trigger: ACTTCCTAATGGGCTGATGCATATATCTTTCTCAAT...AAGTCTTCCAGTTATACTGAAGTTCTTACATACCAGACAGGGCATCTTCAGAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| 3UTR-3UTR CCA 90 bp | AATGATTGGCATTCATATAACACTATGTCCCTTTCTATCCTCAGAATGATAGACACTGGAAGACTTGAGTaGAACTATAGAATAACACCA | + |
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Preference number: 2 (lower is better) Translates to: NDWHSYNTMSLSILRMIDTGRLE*NYRITP Trigger: TGGTGTTATTCTATAGTTCCACTCAAGTCTTCCAGT...GTCTATCATTCTGAGGATAGAAAGGGACATAGTGTTATATGAATGCCAATCATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| 3UTR-3UTR CAA 90 bp | GTTCCAAACTGGGGCAGTAAGAGAAATGTGACTAGGAGAGAAGGGGTCATGAGTTTCCGTGACCGACTCTaGGCTTTGCAAAGAGGGCAT | + |
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Preference number: 3 (lower is better) Translates to: VPNWGSKRNVTRREGVMSFRDRL*ALQRGH Trigger: ATGCCCTCTTTGCAAAGCCAAGAGTCGGTCACGGAA...ACTCATGACCCCTTCTCTCCTAGTCACATTTCTCTTACTGCCCCAGTTTGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120620.8 |
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| 3UTR-3UTR CAA 90 bp | CCAGTGATTAGCACCCAAAGCACAGCTGGTCTTAAACCACAACTTCCAAGAGCAGACCGACTCTTGGCTTaGCAAAGAGGGCATATAGGT | + |
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Preference number: 3 (lower is better) Translates to: PVISTQSTAGLKPQLPRADRLLA*QRGHIG Trigger: ACCTATATGCCCTCTTTGCAAAGCCAAGAGTCGGTC...TGCTCTTGGAAGTTGTGGTTTAAGACCAGCTGTGCTTTGGGTGCTAATCACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120620.8 |
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| 3UTR CCA 72 bp | CTTCTCTTCATTCATCTTGCTTCCGTTTTGGCTTTTTaGGGTTCCGTGACCGACTCTTGGCTTTGCAAAGAG | + |
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Preference number: 3 (lower is better) Translates to: LLFIHLASVLAF*GSVTDSWLCKE Trigger: CTCTTTGCAAAGCCAAGAGTCGGTCACGGAACCCCAAAAAGCCAAAACGGAAGCAAGATGAATGAAGAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120620.8 |
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| 3UTR-3UTR CAA 90 bp | GCGATTCTGAAGATGCCCTGTCTGGTATGTAAGAACTTCAGTATAACTGGAAGACATCTTGCTTCCGTTTaGGCTTTTTGGGGTTCCGTG | + |
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Preference number: 3 (lower is better) Translates to: AILKMPCLVCKNFSITGRHLASV*AFWGSV Trigger: CACGGAACCCCAAAAAGCCAAAACGGAAGCAAGATG...TCTTCCAGTTATACTGAAGTTCTTACATACCAGACAGGGCATCTTCAGAATCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120620.8 |
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| 3UTR TCA 72 bp | ACAAGTATGGAGAAAGATCCACAGATCTTGCGATTCTaGAGATGCCCTGTCTGGTATGTAAGAACTTCAGTA | + |
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Preference number: 3 (lower is better) Translates to: TSMEKDPQILRF*RCPVWYVRTSV Trigger: TACTGAAGTTCTTACATACCAGACAGGGCATCTTCAGAATCGCAAGATCTGTGGATCTTTCTCCATACTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS-3UTR TCA 90 bp | CCAGTGATTAGCACCCAAAGCACAGCTGGTCTTAAACCACAACTTCCAAGAGCAGCCACCTGGAGTTGTTaGGCAGCAGCAGCTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PVISTQSTAGLKPQLPRAATWSC*AAAAAA Trigger: TGCTGCAGCTGCTGCTGCTCAACAACTCCAGGTGGC...TGCTCTTGGAAGTTGTGGTTTAAGACCAGCTGTGCTTTGGGTGCTAATCACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS-3UTR GCA 90 bp | CCAGTGATTAGCACCCAAAGCACAGCTGGTCTTAAACCACAACTTCCAAGAGCAGCAGGCCCAATGTCATaGGCAGGGCATCCACGTGTT | + |
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Preference number: 4 (lower is better) Translates to: PVISTQSTAGLKPQLPRAAGPMS*AGHPRV Trigger: AACACGTGGATGCCCTGCGCATGACATTGGGCCTGC...TGCTCTTGGAAGTTGTGGTTTAAGACCAGCTGTGCTTTGGGTGCTAATCACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS-3UTR TCA 90 bp | GATGTGGGGCATGGAGAGCTTAAGTGTCTTTTATTTGTGGAAGAAAGGTCACCTGCCACCTGGAGTTGTTaGGCAGCAGCAGCTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: DVGHGELKCLLFVEERSPATWSC*AAAAAA Trigger: TGCTGCAGCTGCTGCTGCTCAACAACTCCAGGTGGC...AGGTGACCTTTCTTCCACAAATAAAAGACACTTAAGCTCTCCATGCCCCACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS-3UTR GCA 90 bp | CCAGTGATTAGCACCCAAAGCACAGCTGGTCTTAAACCACAACTTCCAAGAGCAAGGTCAGGAAGCCTTTaGAGGCCCAATGTCATGCGC | + |
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Preference number: 4 (lower is better) Translates to: PVISTQSTAGLKPQLPRARSGSL*RPNVMR Trigger: GCGCATGACATTGGGCCTGCAAAGGCTTCCTGACCT...TGCTCTTGGAAGTTGTGGTTTAAGACCAGCTGTGCTTTGGGTGCTAATCACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS-3UTR GCA 90 bp | CCAGTGATTAGCACCCAAAGCACAGCTGGTCTTAAACCACAACTTCCAAGAGCATTCATAGGTGGAGGCTaGTGCCTGAAGGTGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: PVISTQSTAGLKPQLPRAFIGGG*CLKVAV Trigger: GACAGCCACCTTCAGGCAGCAGCCTCCACCTATGAA...TGCTCTTGGAAGTTGTGGTTTAAGACCAGCTGTGCTTTGGGTGCTAATCACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 |
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| CDS-3UTR GCA 90 bp | ACCACAGCAATAAGACCCAGTATTTTAGGCAGTGAACTAGGTGACTCTTGTGGCAGGTCAGGAAGCCTTTaGAGGCCCAATGTCATGCGC | + |
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Preference number: 4 (lower is better) Translates to: TTAIRPSILGSELGDSCGRSGSL*RPNVMR Trigger: GCGCATGACATTGGGCCTGCAAAGGCTTCCTGACCT...GCCACAAGAGTCACCTAGTTCACTGCCTAAAATACTGGGTCTTATTGCTGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| 3UTR CAA 72 bp | TCCCTCCACCTTCTCTTCATTCATCTTGCTTCCGTTTaGGCTTTTTGGGGTTCCGTGACCGACTCTTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SLHLLFIHLASV*AFWGSVTDSWL Trigger: AAGCCAAGAGTCGGTCACGGAACCCCAAAAAGCCAAAACGGAAGCAAGATGAATGAAGAGAAGGTGGAGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120620.8 |
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| CDS-3UTR TCA 90 bp | AAAAATCAGAACATCTATCACTCTGACCAAAGAGAGGCTTTACGACCAACAGAGGCCACCTGGAGTTGTTaGGCAGCAGCAGCTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: KNQNIYHSDQREALRPTEATWSC*AAAAAA Trigger: TGCTGCAGCTGCTGCTGCTCAACAACTCCAGGTGGC...CTCTGTTGGTCGTAAAGCCTCTCTTTGGTCAGAGTGATAGATGTTCTGATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS-3UTR TCA 90 bp | ACCACAGCAATAAGACCCAGTATTTTAGGCAGTGAACTAGGTGACTCTTGTGGCCTTTTTGGGGTTCCGTaGCCGACTCTTGGCTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: TTAIRPSILGSELGDSCGLFGVP*PTLGFA Trigger: TGCAAAGCCAAGAGTCGGTCACGGAACCCCAAAAAG...GCCACAAGAGTCACCTAGTTCACTGCCTAAAATACTGGGTCTTATTGCTGTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 |
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| CDS-3UTR GCA 90 bp | GCGATTCTGAAGATGCCCTGTCTGGTATGTAAGAACTTCAGTATAACTGGAAGAGCAGGCCCAATGTCATaGGCAGGGCATCCACGTGTT | + |
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Preference number: 4 (lower is better) Translates to: AILKMPCLVCKNFSITGRAGPMS*AGHPRV Trigger: AACACGTGGATGCCCTGCGCATGACATTGGGCCTGC...TCTTCCAGTTATACTGAAGTTCTTACATACCAGACAGGGCATCTTCAGAATCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS-3UTR GCA 90 bp | GCGATTCTGAAGATGCCCTGTCTGGTATGTAAGAACTTCAGTATAACTGGAAGAGTCTGCCTTGTGTCCTaGTTCCTGGCCACCTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: AILKMPCLVCKNFSITGRVCLVS*FLATWS Trigger: ACTCCAGGTGGCCAGGAAGCAGGACACAAGGCAGAC...TCTTCCAGTTATACTGAAGTTCTTACATACCAGACAGGGCATCTTCAGAATCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS-3UTR GCA 90 bp | TACAGCAAAAATAAAGTAGTTGTCCCTGCAGAACCCAAGGCAAAAACAGAGGGAATAGGTGGAGGCTGCTaGCTGAAGGTGGCTGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: YSKNKVVVPAEPKAKTEGIGGGC*LKVAVC Trigger: GCAGACAGCCACCTTCAGGCAGCAGCCTCCACCTAT...TCCCTCTGTTTTTGCCTTGGGTTCTGCAGGGACAACTACTTTATTTTTGCTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS-3UTR GCA 90 bp | GATGTGGGGCATGGAGAGCTTAAGTGTCTTTTATTTGTGGAAGAAAGGTCACCTTTCATAGGTGGAGGCTaGTGCCTGAAGGTGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: DVGHGELKCLLFVEERSPFIGGG*CLKVAV Trigger: GACAGCCACCTTCAGGCAGCAGCCTCCACCTATGAA...AGGTGACCTTTCTTCCACAAATAAAAGACACTTAAGCTCTCCATGCCCCACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 |
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| CDS-3UTR CCA 90 bp | AAGTATGGAGAAAGATCCACAGATCTTGCGATTCTGAAGATGCCCTGTCTGGTACGGAGTTCCTCCACATaGGCCATCTTCTCCTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: KYGERSTDLAILKMPCLVRSSST*AIFSCS Trigger: GCTACAGGAGAAGATGGCCCATGTGGAGGAACTCCG...TACCAGACAGGGCATCTTCAGAATCGCAAGATCTGTGGATCTTTCTCCATACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS-3UTR CCA 90 bp | GATGTGGGGCATGGAGAGCTTAAGTGTCTTTTATTTGTGGAAGAAAGGTCACCTCGGAGTTCCTCCACATaGGCCATCTTCTCCTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: DVGHGELKCLLFVEERSPRSSST*AIFSCS Trigger: GCTACAGGAGAAGATGGCCCATGTGGAGGAACTCCG...AGGTGACCTTTCTTCCACAAATAAAAGACACTTAAGCTCTCCATGCCCCACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS-3UTR GCA 90 bp | TACAGCAAAAATAAAGTAGTTGTCCCTGCAGAACCCAAGGCAAAAACAGAGGGATTGAGCAGCAGCAGCTaGAGCAGCAAGGGATTCAGG | + |
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Preference number: 4 (lower is better) Translates to: YSKNKVVVPAEPKAKTEGLSSSS*SSKGFR Trigger: CCTGAATCCCTTGCTGCTGCAGCTGCTGCTGCTCAA...TCCCTCTGTTTTTGCCTTGGGTTCTGCAGGGACAACTACTTTATTTTTGCTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS-3UTR TCA 90 bp | AAGTATGGAGAAAGATCCACAGATCTTGCGATTCTGAAGATGCCCTGTCTGGTAGGTTTATACTCATCATaGAGCCTCCGGGTTGACTCC | + |
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Preference number: 4 (lower is better) Translates to: KYGERSTDLAILKMPCLVGLYSS*SLRVDS Trigger: GGAGTCAACCCGGAGGCTTCATGATGAGTATAAACC...TACCAGACAGGGCATCTTCAGAATCGCAAGATCTGTGGATCTTTCTCCATACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS-3UTR GCA 90 bp | GGCATGGAGAGCTTAAGTGTCTTTTATTTGTGGAAGAAAGGTCACCTACATAACTTGAGCAGCAGCAGCTaGAGCAGCAAGGGATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GMESLSVFYLWKKGHLHNLSSSS*SSKGFR Trigger: CCTGAATCCCTTGCTGCTGCAGCTGCTGCTGCTCAA...GTTATGTAGGTGACCTTTCTTCCACAAATAAAAGACACTTAAGCTCTCCATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR GCA 90 bp | ATTCTGAAGATGCCCTGTCTGGTATGTAAGAACTTCAGTATAACTGGAAGACTTATAGGTGGAGGCTGCTaGCTGAAGGTGGCTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILKMPCLVCKNFSITGRLIGGGC*LKVAVC Trigger: GCAGACAGCCACCTTCAGGCAGCAGCCTCCACCTAT...AAGTCTTCCAGTTATACTGAAGTTCTTACATACCAGACAGGGCATCTTCAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR CCA 90 bp | AAAAATCAGAACATCTATCACTCTGACCAAAGAGAGGCTTTACGACCAACAGAGCGGAGTTCCTCCACATaGGCCATCTTCTCCTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KNQNIYHSDQREALRPTERSSST*AIFSCS Trigger: GCTACAGGAGAAGATGGCCCATGTGGAGGAACTCCG...CTCTGTTGGTCGTAAAGCCTCTCTTTGGTCAGAGTGATAGATGTTCTGATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR CCA 90 bp | AAAATCAGAACATCTATCACTCTGACCAAAGAGAGGCTTTACGACCAACAGAGGTTGTGTCCTGCTTCCTaGCCACCTGGAGTTGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KIRTSITLTKERLYDQQRLCPAS*PPGVVE Trigger: CTCAACAACTCCAGGTGGCCAGGAAGCAGGACACAA...CCTCTGTTGGTCGTAAAGCCTCTCTTTGGTCAGAGTGATAGATGTTCTGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR CCA 90 bp | GATGTGGGGCATGGAGAGCTTAAGTGTCTTTTATTTGTGGAAGAAAGGTCACCTTCCGTGACCGACTCTTaGCTTTGCAAAGAGGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: DVGHGELKCLLFVEERSPSVTDS*LCKEGI Trigger: TATGCCCTCTTTGCAAAGCCAAGAGTCGGTCACGGA...AGGTGACCTTTCTTCCACAAATAAAAGACACTTAAGCTCTCCATGCCCCACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 |
||
| CDS-3UTR CCA 90 bp | AAGTATGGAGAAAGATCCACAGATCTTGCGATTCTGAAGATGCCCTGTCTGGTATCCGTGACCGACTCTTaGCTTTGCAAAGAGGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: KYGERSTDLAILKMPCLVSVTDS*LCKEGI Trigger: TATGCCCTCTTTGCAAAGCCAAGAGTCGGTCACGGA...TACCAGACAGGGCATCTTCAGAATCGCAAGATCTGTGGATCTTTCTCCATACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTGATTAGCACCCAAAGCACAGCTGGTCTTAAACCACAACTTCCAAGAGCAGGGGATGACATACATTaGATGGGTCATTTCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PVISTQSTAGLKPQLPRAGDDIH*MGHFQG Trigger: TCCTTGGAAATGACCCATCCAATGTATGTCATCCCC...TGCTCTTGGAAGTTGTGGTTTAAGACCAGCTGTGCTTTGGGTGCTAATCACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120620.8 |
||
| CDS-3UTR TCA 90 bp | AAAATCAGAACATCTATCACTCTGACCAAAGAGAGGCTTTACGACCAACAGAGGCCTTCAAACGGGCCTTaGTCTTTTCCATCTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KIRTSITLTKERLYDQQRPSNGP*SFPSAE Trigger: CTCTGCAGATGGAAAAGATCAAGGCCCGTTTGAAGG...CCTCTGTTGGTCGTAAAGCCTCTCTTTGGTCAGAGTGATAGATGTTCTGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR TCA 90 bp | TACAGCAAAAATAAAGTAGTTGTCCCTGCAGAACCCAAGGCAAAAACAGAGGGAGGTTTATACTCATCATaGAGCCTCCGGGTTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: YSKNKVVVPAEPKAKTEGGLYSS*SLRVDS Trigger: GGAGTCAACCCGGAGGCTTCATGATGAGTATAAACC...TCCCTCTGTTTTTGCCTTGGGTTCTGCAGGGACAACTACTTTATTTTTGCTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR GCA 90 bp | ATTCTGAAGATGCCCTGTCTGGTATGTAAGAACTTCAGTATAACTGGAAGACTTTTGAGCAGCAGCAGCTaGAGCAGCAAGGGATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILKMPCLVCKNFSITGRLLSSSS*SSKGFR Trigger: CCTGAATCCCTTGCTGCTGCAGCTGCTGCTGCTCAA...AAGTCTTCCAGTTATACTGAAGTTCTTACATACCAGACAGGGCATCTTCAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR TCA 90 bp | GGCATGGAGAGCTTAAGTGTCTTTTATTTGTGGAAGAAAGGTCACCTACATAACCCTTCAAACGGGCCTTaGTCTTTTCCATCTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GMESLSVFYLWKKGHLHNPSNGP*SFPSAE Trigger: CTCTGCAGATGGAAAAGATCAAGGCCCGTTTGAAGG...GTTATGTAGGTGACCTTTCTTCCACAAATAAAAGACACTTAAGCTCTCCATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAACACTTGTCTAAGTTACCCCTAGATTTTAATGATGACCTGAATATTGAGGCAGGCCCAATGTCATaGGCAGGGCATCCACGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KEHLSKLPLDFNDDLNIEAGPMS*AGHPRV Trigger: AACACGTGGATGCCCTGCGCATGACATTGGGCCTGC...CTCAATATTCAGGTCATCATTAAAATCTAGGGGTAACTTAGACAAGTGTTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR GCA 90 bp | CTGGTATGTAAGAACTTCAGTATAACTGGAAGACTTGAGTGGAACTATAGAATAGTCTGCCTTGTGTCCTaGTTCCTGGCCACCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVCKNFSITGRLEWNYRIVCLVS*FLATWS Trigger: ACTCCAGGTGGCCAGGAAGCAGGACACAAGGCAGAC...TATTCTATAGTTCCACTCAAGTCTTCCAGTTATACTGAAGTTCTTACATACCAG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAACACTTGTCTAAGTTACCCCTAGATTTTAATGATGACCTGAATATTGAGATAGGTGGAGGCTGCTaGCTGAAGGTGGCTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KEHLSKLPLDFNDDLNIEIGGGC*LKVAVC Trigger: GCAGACAGCCACCTTCAGGCAGCAGCCTCCACCTAT...CTCAATATTCAGGTCATCATTAAAATCTAGGGGTAACTTAGACAAGTGTTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR CCA 90 bp | GATGTGGGGCATGGAGAGCTTAAGTGTCTTTTATTTGTGGAAGAAAGGTCACCTACATTGATATCAGCATaGATGAGTCGGAGTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DVGHGELKCLLFVEERSPTLISA*MSRSSS Trigger: GGAGGAACTCCGACTCATCCATGCTGATATCAATGT...AGGTGACCTTTCTTCCACAAATAAAAGACACTTAAGCTCTCCATGCCCCACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAAGCCTTTTTCCAAAGCAAGGCATGGAGCTCCTCCAGTCTTTACACCCTATTTCCAATTTGCACATaGTTTCTTGTTCATCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TEAFFQSKAWSSSSLYTLFPICT*FLVHLP Trigger: TGGCAGATGAACAAGAAATCATGTGCAAATTGGAAA...TAGGGTGTAAAGACTGGAGGAGCTCCATGCCTTGCTTTGGAAAAAGGCTTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR TCA 90 bp | AAAATCAGAACATCTATCACTCTGACCAAAGAGAGGCTTTACGACCAACAGAGGAATCTGTTGGTGACATaGCAAACAGGCCTTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: KIRTSITLTKERLYDQQRNLLVT*QTGLHR Trigger: CCTATGAAGGCCTGTTTGTCATGTCACCAACAGATT...CCTCTGTTGGTCGTAAAGCCTCTCTTTGGTCAGAGTGATAGATGTTCTGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 |
||
| CDS-3UTR GCA 90 bp | AATGATTGGCATTCATATAACACTATGTCCCTTTCTATCCTCAGAATGATAGACAGGTCAGGAAGCCTTTaGAGGCCCAATGTCATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NDWHSYNTMSLSILRMIDRSGSL*RPNVMR Trigger: GCGCATGACATTGGGCCTGCAAAGGCTTCCTGACCT...GTCTATCATTCTGAGGATAGAAAGGGACATAGTGTTATATGAATGCCAATCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR CCA 90 bp | ACTGAAGCCTTTTTCCAAAGCAAGGCATGGAGCTCCTCCAGTCTTTACACCCTACACGTGTTCTTTCAGTaGTTTATACTCATCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TEAFFQSKAWSSSSLYTLHVFFQ*FILIMK Trigger: CTTCATGATGAGTATAAACCACTGAAAGAACACGTG...TAGGGTGTAAAGACTGGAGGAGCTCCATGCCTTGCTTTGGAAAAAGGCTTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAACACTTGTCTAAGTTACCCCTAGATTTTAATGATGACCTGAATATTGAGACAGGCCTTCATAGGTaGAGGCTGCTGCCTGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KEHLSKLPLDFNDDLNIETGLHR*RLLPEG Trigger: ACCTTCAGGCAGCAGCCTCCACCTATGAAGGCCTGT...CTCAATATTCAGGTCATCATTAAAATCTAGGGGTAACTTAGACAAGTGTTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 |
||
| CDS-3UTR CCA 90 bp | AATGATTGGCATTCATATAACACTATGTCCCTTTCTATCCTCAGAATGATAGACACAGGCCTTCATAGGTaGAGGCTGCTGCCTGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NDWHSYNTMSLSILRMIDTGLHR*RLLPEG Trigger: ACCTTCAGGCAGCAGCCTCCACCTATGAAGGCCTGT...GTCTATCATTCTGAGGATAGAAAGGGACATAGTGTTATATGAATGCCAATCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 |
||
| CDS-3UTR GCA 90 bp | GCGATTCTGAAGATGCCCTGTCTGGTATGTAAGAACTTCAGTATAACTGGAAGATTGTATTCTTTCAGGTaGCTCTCTTCAGACTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AILKMPCLVCKNFSITGRLYSFR*LSSDSR Trigger: TCTGGAGTCTGAAGAGAGGCACCTGAAAGAATACAA...TCTTCCAGTTATACTGAAGTTCTTACATACCAGACAGGGCATCTTCAGAATCGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR GCA 90 bp | AAGTATGGAGAAAGATCCACAGATCTTGCGATTCTGAAGATGCCCTGTCTGGTAAAGAGGGCATATAGGTaGATTTCGATGAATCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KYGERSTDLAILKMPCLVKRAYR*ISMNLL Trigger: CAACAGATTCATCGAAATGCACCTATATGCCCTCTT...TACCAGACAGGGCATCTTCAGAATCGCAAGATCTGTGGATCTTTCTCCATACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 |
||
| CDS-3UTR CCA 90 bp | AAGGAACACTTGTCTAAGTTACCCCTAGATTTTAATGATGACCTGAATATTGAGTTGTGTCCTGCTTCCTaGCCACCTGGAGTTGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KEHLSKLPLDFNDDLNIELCPAS*PPGVVE Trigger: CTCAACAACTCCAGGTGGCCAGGAAGCAGGACACAA...CTCAATATTCAGGTCATCATTAAAATCTAGGGGTAACTTAGACAAGTGTTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR CCA 90 bp | AATGATTGGCATTCATATAACACTATGTCCCTTTCTATCCTCAGAATGATAGACTTGTGTCCTGCTTCCTaGCCACCTGGAGTTGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NDWHSYNTMSLSILRMIDLCPAS*PPGVVE Trigger: CTCAACAACTCCAGGTGGCCAGGAAGCAGGACACAA...GTCTATCATTCTGAGGATAGAAAGGGACATAGTGTTATATGAATGCCAATCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR GCA 90 bp | AAAAATCAGAACATCTATCACTCTGACCAAAGAGAGGCTTTACGACCAACAGAGTTGTATTCTTTCAGGTaGCTCTCTTCAGACTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KNQNIYHSDQREALRPTELYSFR*LSSDSR Trigger: TCTGGAGTCTGAAGAGAGGCACCTGAAAGAATACAA...CTCTGTTGGTCGTAAAGCCTCTCTTTGGTCAGAGTGATAGATGTTCTGATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR GCA 90 bp | GCGATTCTGAAGATGCCCTGTCTGGTATGTAAGAACTTCAGTATAACTGGAAGATTCAGTCTGCCATTCTaGTTTCTGCTTCTCAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: AILKMPCLVCKNFSITGRFSLPF*FLLLKV Trigger: TACTTTGAGAAGCAGAAAGCAGAATGGCAGACTGAA...TCTTCCAGTTATACTGAAGTTCTTACATACCAGACAGGGCATCTTCAGAATCGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR GCA 90 bp | GCGATTCTGAAGATGCCCTGTCTGGTATGTAAGAACTTCAGTATAACTGGAAGAAAGAGGGCATATAGGTaGATTTCGATGAATCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AILKMPCLVCKNFSITGRKRAYR*ISMNLL Trigger: CAACAGATTCATCGAAATGCACCTATATGCCCTCTT...TCTTCCAGTTATACTGAAGTTCTTACATACCAGACAGGGCATCTTCAGAATCGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 |
||
| CDS-3UTR CCA 90 bp | ATTCTGAAGATGCCCTGTCTGGTATGTAAGAACTTCAGTATAACTGGAAGACTTACATTGATATCAGCATaGATGAGTCGGAGTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILKMPCLVCKNFSITGRLTLISA*MSRSSS Trigger: GGAGGAACTCCGACTCATCCATGCTGATATCAATGT...AAGTCTTCCAGTTATACTGAAGTTCTTACATACCAGACAGGGCATCTTCAGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR TCA 90 bp | AAAATCAGAACATCTATCACTCTGACCAAAGAGAGGCTTTACGACCAACAGAGGTTTCCAATTTGCACATaGTTTCTTGTTCATCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KIRTSITLTKERLYDQQRFPICT*FLVHLP Trigger: TGGCAGATGAACAAGAAATCATGTGCAAATTGGAAA...CCTCTGTTGGTCGTAAAGCCTCTCTTTGGTCAGAGTGATAGATGTTCTGATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR GCA 90 bp | AAAAATCAGAACATCTATCACTCTGACCAAAGAGAGGCTTTACGACCAACAGAGTTGATCTTTTCCATCTaGAGAGTCTTGTTCCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: KNQNIYHSDQREALRPTELIFSI*RVLFLI Trigger: GATCAGGAACAAGACTCTGCAGATGGAAAAGATCAA...CTCTGTTGGTCGTAAAGCCTCTCTTTGGTCAGAGTGATAGATGTTCTGATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR TCA 90 bp | GGCATGGAGAGCTTAAGTGTCTTTTATTTGTGGAAGAAAGGTCACCTACATAACTTTCCAATTTGCACATaGTTTCTTGTTCATCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GMESLSVFYLWKKGHLHNFPICT*FLVHLP Trigger: TGGCAGATGAACAAGAAATCATGTGCAAATTGGAAA...GTTATGTAGGTGACCTTTCTTCCACAAATAAAAGACACTTAAGCTCTCCATGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR TCA 90 bp | CTGGTATGTAAGAACTTCAGTATAACTGGAAGACTTGAGTGGAACTATAGAATAAATCTGTTGGTGACATaGCAAACAGGCCTTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVCKNFSITGRLEWNYRINLLVT*QTGLHR Trigger: CCTATGAAGGCCTGTTTGTCATGTCACCAACAGATT...TATTCTATAGTTCCACTCAAGTCTTCCAGTTATACTGAAGTTCTTACATACCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 |
||
| CDS-3UTR CCA 90 bp | ATTCTGAAGATGCCCTGTCTGGTATGTAAGAACTTCAGTATAACTGGAAGACTTCACGTGTTCTTTCAGTaGTTTATACTCATCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILKMPCLVCKNFSITGRLHVFFQ*FILIMK Trigger: CTTCATGATGAGTATAAACCACTGAAAGAACACGTG...AAGTCTTCCAGTTATACTGAAGTTCTTACATACCAGACAGGGCATCTTCAGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAACACTTGTCTAAGTTACCCCTAGATTTTAATGATGACCTGAATATTGAGTTGATCTTTTCCATCTaGAGAGTCTTGTTCCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: KEHLSKLPLDFNDDLNIELIFSI*RVLFLI Trigger: GATCAGGAACAAGACTCTGCAGATGGAAAAGATCAA...CTCAATATTCAGGTCATCATTAAAATCTAGGGGTAACTTAGACAAGTGTTCCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR GCA 90 bp | CTGGTATGTAAGAACTTCAGTATAACTGGAAGACTTGAGTGGAACTATAGAATATTGATCTTTTCCATCTaGAGAGTCTTGTTCCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: LVCKNFSITGRLEWNYRILIFSI*RVLFLI Trigger: GATCAGGAACAAGACTCTGCAGATGGAAAAGATCAA...TATTCTATAGTTCCACTCAAGTCTTCCAGTTATACTGAAGTTCTTACATACCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAACACTTGTCTAAGTTACCCCTAGATTTTAATGATGACCTGAATATTGAGTTCAGTCTGCCATTCTaGTTTCTGCTTCTCAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KEHLSKLPLDFNDDLNIEFSLPF*FLLLKV Trigger: TACTTTGAGAAGCAGAAAGCAGAATGGCAGACTGAA...CTCAATATTCAGGTCATCATTAAAATCTAGGGGTAACTTAGACAAGTGTTCCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR CCA 90 bp | CTGGTATGTAAGAACTTCAGTATAACTGGAAGACTTGAGTGGAACTATAGAATACACGTGTTCTTTCAGTaGTTTATACTCATCATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVCKNFSITGRLEWNYRIHVFFQ*FILIMK Trigger: CTTCATGATGAGTATAAACCACTGAAAGAACACGTG...TATTCTATAGTTCCACTCAAGTCTTCCAGTTATACTGAAGTTCTTACATACCAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCAAACTGGGGCAGTAAGAGAAATGTGACTAGGAGAGAAGGGGTCATGAGTGGCCACCTGGAGTTGTaGAGCAGCAGCAGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VPNWGSKRNVTRREGVMSGHLEL*SSSSCS Trigger: GCTGCAGCTGCTGCTGCTCAACAACTCCAGGTGGCC...ACTCATGACCCCTTCTCTCCTAGTCACATTTCTCTTACTGCCCCAGTTTGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR CAA 90 bp | ACTGAAGCCTTTTTCCAAAGCAAGGCATGGAGCTCCTCCAGTCTTTACACCCTACCTGGCCACCTGGAGTaGTTGAGCAGCAGCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TEAFFQSKAWSSSSLYTLPGHLE*LSSSSC Trigger: GCAGCTGCTGCTGCTCAACAACTCCAGGTGGCCAGG...TAGGGTGTAAAGACTGGAGGAGCTCCATGCCTTGCTTTGGAAAAAGGCTTCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCAAACTGGGGCAGTAAGAGAAATGTGACTAGGAGAGAAGGGGTCATGAGTCCTGGCCACCTGGAGTaGTTGAGCAGCAGCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VPNWGSKRNVTRREGVMSPGHLE*LSSSSC Trigger: GCAGCTGCTGCTGCTCAACAACTCCAGGTGGCCAGG...ACTCATGACCCCTTCTCTCCTAGTCACATTTCTCTTACTGCCCCAGTTTGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS CCA 90 bp | GGAGTTGTTGAGCAGCAGCAGCTGCAGCAGCAAGGGATTCAGGTATaGGGGGTTCTTGAGGTTCAGTCTGCCATTCTGCTTTCTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GVVEQQQLQQQGIQV*GVLEVQSAILLSAS Trigger: AGAAGCAGAAAGCAGAATGGCAGACTGAACCTCAAGAACCCCCCATACCTGAATCCCTTGCTGCTGCAGCTGCTGCTGCTCAACAACTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR CAA 90 bp | AAGTATGGAGAAAGATCCACAGATCTTGCGATTCTGAAGATGCCCTGTCTGGTAGGCCACCTGGAGTTGTaGAGCAGCAGCAGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KYGERSTDLAILKMPCLVGHLEL*SSSSCS Trigger: GCTGCAGCTGCTGCTGCTCAACAACTCCAGGTGGCC...TACCAGACAGGGCATCTTCAGAATCGCAAGATCTGTGGATCTTTCTCCATACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS GCA 90 bp | TTCTCCTGTAGCAGGAGATCCATCTCCTGTTTGTATTCTTTCAGGTaGCTCTCTTCAGACTCCAGAGCCTCGAACTCAGCCTTCAAACGG | + |
|
Preference number: 5 (lower is better) Translates to: FSCSRRSISCLYSFR*LSSDSRASNSAFKR Trigger: CCGTTTGAAGGCTGAGTTCGAGGCTCTGGAGTCTGAAGAGAGGCACCTGAAAGAATACAAACAGGAGATGGATCTCCTGCTACAGGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS GCA 90 bp | CTTCCTCTTCACACAGGTCAGGAAGCCTTTGCAGGCCCAATGTCATaGGCAGGGCATCCACGTGTTCTTTCAGTGGTTTATACTCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: LPLHTGQEAFAGPMS*AGHPRVLSVVYTHH Trigger: ATGATGAGTATAAACCACTGAAAGAACACGTGGATGCCCTGCGCATGACATTGGGCCTGCAAAGGCTTCCTGACCTGTGTGAAGAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS-3UTR CAA 90 bp | CCAGTGATTAGCACCCAAAGCACAGCTGGTCTTAAACCACAACTTCCAAGAGCACATCTTGCTTCCGTTTaGGCTTTTTGGGGTTCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: PVISTQSTAGLKPQLPRAHLASV*AFWGSV Trigger: CACGGAACCCCAAAAAGCCAAAACGGAAGCAAGATG...TGCTCTTGGAAGTTGTGGTTTAAGACCAGCTGTGCTTTGGGTGCTAATCACTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 |
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| CDS-3UTR CAA 90 bp | GATGTGGGGCATGGAGAGCTTAAGTGTCTTTTATTTGTGGAAGAAAGGTCACCTTTCCGTGACCGACTCTaGGCTTTGCAAAGAGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: DVGHGELKCLLFVEERSPFRDRL*ALQRGH Trigger: ATGCCCTCTTTGCAAAGCCAAGAGTCGGTCACGGAA...AGGTGACCTTTCTTCCACAAATAAAAGACACTTAAGCTCTCCATGCCCCACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 |
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| CDS TCA 90 bp | ATGCGCAGGGCATCCACGTGTTCTTTCAGTGGTTTATACTCATCATaGAGCCTCCGGGTTGACTCCAGCAGCTTGTTTAAGTCATTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: MRRASTCSFSGLYSS*SLRVDSSSLFKSFS Trigger: TGAAAATGACTTAAACAAGCTGCTGGAGTCAACCCGGAGGCTTCATGATGAGTATAAACCACTGAAAGAACACGTGGATGCCCTGCGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS-3UTR CAA 90 bp | GTTCCAAACTGGGGCAGTAAGAGAAATGTGACTAGGAGAGAAGGGGTCATGAGTAGATCCATCTCCTGTTaGTATTCTTTCAGGTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VPNWGSKRNVTRREGVMSRSISC*YSFRCL Trigger: GAGGCACCTGAAAGAATACAAACAGGAGATGGATCT...ACTCATGACCCCTTCTCTCCTAGTCACATTTCTCTTACTGCCCCAGTTTGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS-3UTR CAA 90 bp | GCGATTCTGAAGATGCCCTGTCTGGTATGTAAGAACTTCAGTATAACTGGAAGACATGAAGCCTCCGGGTaGACTCCAGCAGCTTGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: AILKMPCLVCKNFSITGRHEASG*TPAACL Trigger: TAAACAAGCTGCTGGAGTCAACCCGGAGGCTTCATG...TCTTCCAGTTATACTGAAGTTCTTACATACCAGACAGGGCATCTTCAGAATCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS-3UTR CAA 90 bp | AAAATCAGAACATCTATCACTCTGACCAAAGAGAGGCTTTACGACCAACAGAGGCATGAAGCCTCCGGGTaGACTCCAGCAGCTTGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: KIRTSITLTKERLYDQQRHEASG*TPAACL Trigger: TAAACAAGCTGCTGGAGTCAACCCGGAGGCTTCATG...CCTCTGTTGGTCGTAAAGCCTCTCTTTGGTCAGAGTGATAGATGTTCTGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS-3UTR CAA 90 bp | AAGGAACACTTGTCTAAGTTACCCCTAGATTTTAATGATGACCTGAATATTGAGGGCCACCTGGAGTTGTaGAGCAGCAGCAGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KEHLSKLPLDFNDDLNIEGHLEL*SSSSCS Trigger: GCTGCAGCTGCTGCTGCTCAACAACTCCAGGTGGCC...CTCAATATTCAGGTCATCATTAAAATCTAGGGGTAACTTAGACAAGTGTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR CAA 90 bp | CTGGTATGTAAGAACTTCAGTATAACTGGAAGACTTGAGTGGAACTATAGAATACCTGGCCACCTGGAGTaGTTGAGCAGCAGCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LVCKNFSITGRLEWNYRIPGHLE*LSSSSC Trigger: GCAGCTGCTGCTGCTCAACAACTCCAGGTGGCCAGG...TATTCTATAGTTCCACTCAAGTCTTCCAGTTATACTGAAGTTCTTACATACCAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR CAA 90 bp | AAAATCAGAACATCTATCACTCTGACCAAAGAGAGGCTTTACGACCAACAGAGGTTCCGTGACCGACTCTaGGCTTTGCAAAGAGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KIRTSITLTKERLYDQQRFRDRL*ALQRGH Trigger: ATGCCCTCTTTGCAAAGCCAAGAGTCGGTCACGGAA...CCTCTGTTGGTCGTAAAGCCTCTCTTTGGTCAGAGTGATAGATGTTCTGATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 |
||
| CDS-3UTR CAA 90 bp | AAAATCAGAACATCTATCACTCTGACCAAAGAGAGGCTTTACGACCAACAGAGGGCCTTCAAACGGGCCTaGATCTTTTCCATCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KIRTSITLTKERLYDQQRAFKRA*IFSICR Trigger: TCTGCAGATGGAAAAGATCAAGGCCCGTTTGAAGGC...CCTCTGTTGGTCGTAAAGCCTCTCTTTGGTCAGAGTGATAGATGTTCTGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS-3UTR CAA 90 bp | AAAAATCAGAACATCTATCACTCTGACCAAAGAGAGGCTTTACGACCAACAGAGCATGAAGCCTCCGGGTaGACTCCAGCAGCTTGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: KNQNIYHSDQREALRPTEHEASG*TPAACL Trigger: TAAACAAGCTGCTGGAGTCAACCCGGAGGCTTCATG...CTCTGTTGGTCGTAAAGCCTCTCTTTGGTCAGAGTGATAGATGTTCTGATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR CAA 90 bp | TACAGCAAAAATAAAGTAGTTGTCCCTGCAGAACCCAAGGCAAAAACAGAGGGAGACCGACTCTTGGCTTaGCAAAGAGGGCATATAGGT | + |
|
Preference number: 5 (lower is better) Translates to: YSKNKVVVPAEPKAKTEGDRLLA*QRGHIG Trigger: ACCTATATGCCCTCTTTGCAAAGCCAAGAGTCGGTC...TCCCTCTGTTTTTGCCTTGGGTTCTGCAGGGACAACTACTTTATTTTTGCTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 |
||
| CDS-3UTR CAA 90 bp | TACAGCAAAAATAAAGTAGTTGTCCCTGCAGAACCCAAGGCAAAAACAGAGGGACATCTTGCTTCCGTTTaGGCTTTTTGGGGTTCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: YSKNKVVVPAEPKAKTEGHLASV*AFWGSV Trigger: CACGGAACCCCAAAAAGCCAAAACGGAAGCAAGATG...TCCCTCTGTTTTTGCCTTGGGTTCTGCAGGGACAACTACTTTATTTTTGCTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 |
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| CDS CCA 90 bp | TTTTCAGACTGTTTAATGGTGTTTTCCATCACATTGATATCAGCATaGATGAGTCGGAGTTCCTCCACATGGGCCATCTTCTCCTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSDCLMVFSITLISA*MSRSSSTWAIFSCS Trigger: GCTACAGGAGAAGATGGCCCATGTGGAGGAACTCCGACTCATCCATGCTGATATCAATGTGATGGAAAACACCATTAAACAGTCTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044382.7 ENSMUST00000120620.8 |
||
| CDS-3UTR CAA 90 bp | AAAAATCAGAACATCTATCACTCTGACCAAAGAGAGGCTTTACGACCAACAGAGGCCTTCAAACGGGCCTaGATCTTTTCCATCTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KNQNIYHSDQREALRPTEAFKRA*IFSICR Trigger: TCTGCAGATGGAAAAGATCAAGGCCCGTTTGAAGGC...CTCTGTTGGTCGTAAAGCCTCTCTTTGGTCAGAGTGATAGATGTTCTGATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS CCA 90 bp | TGCTTTCTGCTTCTCAAAGTAACTTTGGGGATGACATACATTGGATaGGTCATTTCCAAGGAGAGTTTCTCTTCCTCTTCACACAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CFLLLKVTLGMTYIG*VISKESFSSSSHRS Trigger: TGACCTGTGTGAAGAGGAAGAGAAACTCTCCTTGGAAATGACCCATCCAATGTATGTCATCCCCAAAGTTACTTTGAGAAGCAGAAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120620.8 |
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| CDS-3UTR CAA 90 bp | AAGTATGGAGAAAGATCCACAGATCTTGCGATTCTGAAGATGCCCTGTCTGGTATCCATCTGCAGAGTCTaGTTCCTGATCTCTTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: KYGERSTDLAILKMPCLVSICRV*FLISLM Trigger: CATTAAAGAGATCAGGAACAAGACTCTGCAGATGGA...TACCAGACAGGGCATCTTCAGAATCGCAAGATCTGTGGATCTTTCTCCATACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS-3UTR CAA 90 bp | AAAATCAGAACATCTATCACTCTGACCAAAGAGAGGCTTTACGACCAACAGAGGAGATCCATCTCCTGTTaGTATTCTTTCAGGTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KIRTSITLTKERLYDQQRRSISC*YSFRCL Trigger: GAGGCACCTGAAAGAATACAAACAGGAGATGGATCT...CCTCTGTTGGTCGTAAAGCCTCTCTTTGGTCAGAGTGATAGATGTTCTGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS-3UTR CAA 90 bp | ATTCTGAAGATGCCCTGTCTGGTATGTAAGAACTTCAGTATAACTGGAAGACTTGACCGACTCTTGGCTTaGCAAAGAGGGCATATAGGT | + |
|
Preference number: 5 (lower is better) Translates to: ILKMPCLVCKNFSITGRLDRLLA*QRGHIG Trigger: ACCTATATGCCCTCTTTGCAAAGCCAAGAGTCGGTC...AAGTCTTCCAGTTATACTGAAGTTCTTACATACCAGACAGGGCATCTTCAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 |
||
| CDS-3UTR CAA 90 bp | ACTGAAGCCTTTTTCCAAAGCAAGGCATGGAGCTCCTCCAGTCTTTACACCCTATCATTTTCAGACACATaGATATCAGCATGGATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: TEAFFQSKAWSSSSLYTLSFSDT*ISAWMS Trigger: ACTCATCCATGCTGATATCAATGTGTCTGAAAATGA...TAGGGTGTAAAGACTGGAGGAGCTCCATGCCTTGCTTTGGAAAAAGGCTTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119640.8 |
||
| CDS-3UTR CAA 90 bp | ATTCTGAAGATGCCCTGTCTGGTATGTAAGAACTTCAGTATAACTGGAAGACTTTCCATCTGCAGAGTCTaGTTCCTGATCTCTTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: ILKMPCLVCKNFSITGRLSICRV*FLISLM Trigger: CATTAAAGAGATCAGGAACAAGACTCTGCAGATGGA...AAGTCTTCCAGTTATACTGAAGTTCTTACATACCAGACAGGGCATCTTCAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS-3UTR CAA 90 bp | AATGATTGGCATTCATATAACACTATGTCCCTTTCTATCCTCAGAATGATAGACAGATCCATCTCCTGTTaGTATTCTTTCAGGTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: NDWHSYNTMSLSILRMIDRSISC*YSFRCL Trigger: GAGGCACCTGAAAGAATACAAACAGGAGATGGATCT...GTCTATCATTCTGAGGATAGAAAGGGACATAGTGTTATATGAATGCCAATCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS-3UTR CAA 90 bp | ATTCTGAAGATGCCCTGTCTGGTATGTAAGAACTTCAGTATAACTGGAAGACTTGTGTTTTCCATCACATaGATATCAGCATGGATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ILKMPCLVCKNFSITGRLVFSIT*ISAWMS Trigger: ACTCATCCATGCTGATATCAATGTGATGGAAAACAC...AAGTCTTCCAGTTATACTGAAGTTCTTACATACCAGACAGGGCATCTTCAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044382.7 ENSMUST00000120620.8 |
||
| CDS-3UTR CAA 90 bp | CTGGTATGTAAGAACTTCAGTATAACTGGAAGACTTGAGTGGAACTATAGAATATCCATCTGCAGAGTCTaGTTCCTGATCTCTTTAATG | + |
|
Preference number: 5 (lower is better) Translates to: LVCKNFSITGRLEWNYRISICRV*FLISLM Trigger: CATTAAAGAGATCAGGAACAAGACTCTGCAGATGGA...TATTCTATAGTTCCACTCAAGTCTTCCAGTTATACTGAAGTTCTTACATACCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS CCA 72 bp | GAGCAGCAGCAGCTGCAGCAGCAAGGGATTCAGGTATaGGGGGTTCTTGAGGTTCAGTCTGCCATTCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: EQQQLQQQGIQV*GVLEVQSAILL Trigger: AAGCAGAATGGCAGACTGAACCTCAAGAACCCCCCATACCTGAATCCCTTGCTGCTGCAGCTGCTGCTGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
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| CDS GCA 72 bp | CACACAGGTCAGGAAGCCTTTGCAGGCCCAATGTCATaGGCAGGGCATCCACGTGTTCTTTCAGTGGTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: HTGQEAFAGPMS*AGHPRVLSVVY Trigger: ATAAACCACTGAAAGAACACGTGGATGCCCTGCGCATGACATTGGGCCTGCAAAGGCTTCCTGACCTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS CAA 90 bp | TCCACATGGGCCATCTTCTCCTGTAGCAGGAGATCCATCTCCTGTTaGTATTCTTTCAGGTGCCTCTCTTCAGACTCCAGAGCCTCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: STWAIFSCSRRSISC*YSFRCLSSDSRASN Trigger: GTTCGAGGCTCTGGAGTCTGAAGAGAGGCACCTGAAAGAATACAAACAGGAGATGGATCTCCTGCTACAGGAGAAGATGGCCCATGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS GCA 72 bp | AGCAGGAGATCCATCTCCTGTTTGTATTCTTTCAGGTaGCTCTCTTCAGACTCCAGAGCCTCGAACTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SRRSISCLYSFR*LSSDSRASNSA Trigger: GGCTGAGTTCGAGGCTCTGGAGTCTGAAGAGAGGCACCTGAAAGAATACAAACAGGAGATGGATCTCCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS CAA 72 bp | GACTCCAGAGCCTCGAACTCAGCCTTCAAACGGGCCTaGATCTTTTCCATCTGCAGAGTCTTGTTCCTGATC | + |
|
Preference number: 6 (lower is better) Translates to: DSRASNSAFKRA*IFSICRVLFLI Trigger: GATCAGGAACAAGACTCTGCAGATGGAAAAGATCAAGGCCCGTTTGAAGGCTGAGTTCGAGGCTCTGGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS CAA 72 bp | GCCATCTTCTCCTGTAGCAGGAGATCCATCTCCTGTTaGTATTCTTTCAGGTGCCTCTCTTCAGACTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: AIFSCSRRSISC*YSFRCLSSDSR Trigger: TCTGGAGTCTGAAGAGAGGCACCTGAAAGAATACAAACAGGAGATGGATCTCCTGCTACAGGAGAAGATGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS CAA 90 bp | CTCTCTTCAGACTCCAGAGCCTCGAACTCAGCCTTCAAACGGGCCTaGATCTTTTCCATCTGCAGAGTCTTGTTCCTGATCTCTTTAATG | + |
|
Preference number: 6 (lower is better) Translates to: LSSDSRASNSAFKRA*IFSICRVLFLISLM Trigger: CATTAAAGAGATCAGGAACAAGACTCTGCAGATGGAAAAGATCAAGGCCCGTTTGAAGGCTGAGTTCGAGGCTCTGGAGTCTGAAGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS TCA 72 bp | GCATCCACGTGTTCTTTCAGTGGTTTATACTCATCATaGAGCCTCCGGGTTGACTCCAGCAGCTTGTTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: ASTCSFSGLYSS*SLRVDSSSLFK Trigger: CTTAAACAAGCTGCTGGAGTCAACCCGGAGGCTTCATGATGAGTATAAACCACTGAAAGAACACGTGGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044382.7 ENSMUST00000119640.8 ENSMUST00000120620.8 |
||
| CDS CCA 72 bp | TGTTTAATGGTGTTTTCCATCACATTGATATCAGCATaGATGAGTCGGAGTTCCTCCACATGGGCCATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CLMVFSITLISA*MSRSSSTWAIF Trigger: GAAGATGGCCCATGTGGAGGAACTCCGACTCATCCATGCTGATATCAATGTGATGGAAAACACCATTAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044382.7 ENSMUST00000120620.8 |
||
| CDS CAA 72 bp | CTTTCAGTGGTTTATACTCATCATGAAGCCTCCGGGTaGACTCCAGCAGCTTGTTTAAGTCATTTTCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: LSVVYTHHEASG*TPAACLSHFQT Trigger: AGTCTGAAAATGACTTAAACAAGCTGCTGGAGTCAACCCGGAGGCTTCATGATGAGTATAAACCACTGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044382.7 ENSMUST00000120620.8 |
||
| CDS CAA 72 bp | CTTTCAGTGGTTTATACTCATCATGAAGCCTCCGGGTaGACTCCAGCAGCTTGTTTAAGTCATTTTCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: LSVVYTHHEASG*TPAACLSHFQT Trigger: TGTCTGAAAATGACTTAAACAAGCTGCTGGAGTCAACCCGGAGGCTTCATGATGAGTATAAACCACTGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119640.8 |
||
| CDS CCA 72 bp | CTTCTCAAAGTAACTTTGGGGATGACATACATTGGATaGGTCATTTCCAAGGAGAGTTTCTCTTCCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLKVTLGMTYIG*VISKESFSSSS Trigger: TGAAGAGGAAGAGAAACTCTCCTTGGAAATGACCCATCCAATGTATGTCATCCCCAAAGTTACTTTGAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120620.8 |
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