Pregenerated sensors for ZC3HC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039130Ensembl transcript IDs: ENSMUST00000080812.14, ENSMUST00000102992.10, ENSMUST00000115184.2, ENSMUST00000136255.2, ENSMUST00000147990.2, ENSMUST00000152391.9
Found 221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGATTCAGGCACCAGAGGGAAGTGTTCAGGCCGGCCCTCCACACCTaGAATCGGGGAGCTGGTCAGGCCAAAGGAAGCCTCCAGATCTGT | + |
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Preference number: 1 (lower is better) Translates to: GFRHQREVFRPALHT*NRGAGQAKGSLQIC Trigger: ACAGATCTGGAGGCTTCCTTTGGCCTGACCAGCTCCCCGATTCCAGGTGTGGAGGGCCGGCCTGAACACTTCCCTCTGGTGCCTGAATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
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| 3UTR TCA 90 bp | GCCGAACCAAAGCCGCTGAATGGGTGTTCTAACCCTGCAGTCCCCTaGCGGAACTGGGCCTGCTGTGTCTTACCCTGTCCACACCCCACA | + |
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Preference number: 1 (lower is better) Translates to: AEPKPLNGCSNPAVP*RNWACCVLPCPHPT Trigger: TGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCCAGTTCCGTCAGGGGACTGCAGGGTTAGAACACCCATTCAGCGGCTTTGGTTCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
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| 3UTR GCA 90 bp | AGCTCAGCACATCGCTCCTTATATCTGCCAAAGTCAAACGTGGGCTaGAGGCTGGCACAGAGGAAAGCCTGGCAGCTGGAGCACTTGAGC | + |
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Preference number: 1 (lower is better) Translates to: SSAHRSLYLPKSNVG*RLAQRKAWQLEHLS Trigger: GCTCAAGTGCTCCAGCTGCCAGGCTTTCCTCTGTGCCAGCCTGCAGCCCACGTTTGACTTTGGCAGATATAAGGAGCGATGTGCTGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147990.2 |
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| 3UTR TCA 90 bp | ACATTGCTGAGCTACATGCTCAGAACACTGCCGAACCAAAGCCGCTaGATGGGTGTTCTAACCCTGCAGTCCCCTGACGGAACTGGGCCT | + |
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Preference number: 1 (lower is better) Translates to: TLLSYMLRTLPNQSR*MGVLTLQSPDGTGP Trigger: AGGCCCAGTTCCGTCAGGGGACTGCAGGGTTAGAACACCCATTCAGCGGCTTTGGTTCGGCAGTGTTCTGAGCATGTAGCTCAGCAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
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| 3UTR CCA 90 bp | CTGCCAAAGTCAAACGTGGGCTGCAGGCTGGCACAGAGGAAAGCCTaGCAGCTGGAGCACTTGAGCATGTCACATTCAACTGTGACCCAA | + |
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Preference number: 1 (lower is better) Translates to: LPKSNVGCRLAQRKA*QLEHLSMSHSTVTQ Trigger: TTGGGTCACAGTTGAATGTGACATGCTCAAGTGCTCCAGCTGCCAGGCTTTCCTCTGTGCCAGCCTGCAGCCCACGTTTGACTTTGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147990.2 |
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| 3UTR TCA 90 bp | CGGGGAGCTGGTCAGGCCAAAGGAAGCCTCCAGATCTGTCATGGATaGTTCAATCTGCTGAAAGCCCCAGAGACCGACCTTCCTCATACA | + |
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Preference number: 1 (lower is better) Translates to: RGAGQAKGSLQICHG*FNLLKAPETDLPHT Trigger: TGTATGAGGAAGGTCGGTCTCTGGGGCTTTCAGCAGATTGAATCATCCATGACAGATCTGGAGGCTTCCTTTGGCCTGACCAGCTCCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
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| 3UTR CCA 90 bp | GAATCGGGGAGCTGGTCAGGCCAAAGGAAGCCTCCAGATCTGTCATaGATGATTCAATCTGCTGAAAGCCCCAGAGACCGACCTTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: ESGSWSGQRKPPDLS*MIQSAESPRDRPSS Trigger: TGAGGAAGGTCGGTCTCTGGGGCTTTCAGCAGATTGAATCATCCATGACAGATCTGGAGGCTTCCTTTGGCCTGACCAGCTCCCCGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
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| 3UTR TCA 90 bp | TCTGGCCTCAGAGAAGGAAGTTGGAGGTCCAAATGGCAAAGGCTTTaGAACCGGTCCAGGAACTCACTGATGAGAACAGCAGGCTCACCC | + |
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Preference number: 1 (lower is better) Translates to: SGLREGSWRSKWQRL*NRSRNSLMRTAGSP Trigger: GGGTGAGCCTGCTGTTCTCATCAGTGAGTTCCTGGACCGGTTTCAAAGCCTTTGCCATTTGGACCTCCAACTTCCTTCTCTGAGGCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
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| 3UTR GCA 90 bp | GTTTTCCTGTCATCGGCGTGGAAATCAAGCTCATCCTCCAGCAGGTaGAGCAGGGCACTGACCGCGTCTTCTGTCAAGCACATAGTTTTC | + |
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Preference number: 1 (lower is better) Translates to: VFLSSAWKSSSSSSR*SRALTASSVKHIVF Trigger: GAAAACTATGTGCTTGACAGAAGACGCGGTCAGTGCCCTGCTGCACCTGCTGGAGGATGAGCTTGATTTCCACGCCGATGACAGGAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
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| 3UTR CCA 90 bp | AAACCGGTCCAGGAACTCACTGATGAGAACAGCAGGCTCACCCAATaGCAACATCCCAAATCTATCTGGAGAGGGGCTGTCTGGCCAAAA | + |
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Preference number: 1 (lower is better) Translates to: KPVQELTDENSRLTQ*QHPKSIWRGAVWPK Trigger: TTTTGGCCAGACAGCCCCTCTCCAGATAGATTTGGGATGTTGCCATTGGGTGAGCCTGCTGTTCTCATCAGTGAGTTCCTGGACCGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
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| 3UTR TCA 90 bp | TCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGTGCAGTaGAACCAGAATGAAGAACAGCAGCAGCAGCTGACCAAAGGAACT | + |
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Preference number: 1 (lower is better) Translates to: SGLLFIITCRPSHVQ*NQNEEQQQQLTKGT Trigger: AGTTCCTTTGGTCAGCTGCTGCTGCTGTTCTTCATTCTGGTTTCACTGCACATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| 3UTR CCA 90 bp | CTCACCCAATGGCAACATCCCAAATCTATCTGGAGAGGGGCTGTCTaGCCAAAAACAGAACTTCTCATGGGCACTGCACAAGGATTTCTT | + |
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Preference number: 1 (lower is better) Translates to: LTQWQHPKSIWRGAV*PKTELLMGTAQGFL Trigger: AAGAAATCCTTGTGCAGTGCCCATGAGAAGTTCTGTTTTTGGCCAGACAGCCCCTCTCCAGATAGATTTGGGATGTTGCCATTGGGTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
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| 3UTR TCA 90 bp | CTGGCCAAAAACAGAACTTCTCATGGGCACTGCACAAGGATTTCTTaGGCTCAGCACATCGCTCCTTATATCTGCCAAAGTCAAACGTGG | + |
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Preference number: 1 (lower is better) Translates to: LAKNRTSHGHCTRIS*AQHIAPYICQSQTW Trigger: CCACGTTTGACTTTGGCAGATATAAGGAGCGATGTGCTGAGCTCAAGAAATCCTTGTGCAGTGCCCATGAGAAGTTCTGTTTTTGGCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147990.2 |
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| 3UTR GCA 90 bp | CAGTTCTGTCCGGAGCATCTTCACGATGAGGATGAAGACTCCCACTaGCGGAATATTCGGAACACTTTCCTTGATTTTTCAGAGAGACTC | + |
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Preference number: 1 (lower is better) Translates to: QFCPEHLHDEDEDSH*RNIRNTFLDFSERL Trigger: GAGTCTCTCTGAAAAATCAAGGAAAGTGTTCCGAATATTCCGGCAGTGGGAGTCTTCATCCTCATCGTGAAGATGCTCCGGACAGAACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102992.10 |
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| 3UTR CCA 90 bp | CATGTCACATTCAACTGTGACCCAACCATATTTAGCGCAGATAAGTaGAGACAGCTCAGGGGGCTTCCCTGCCCACTTCAAAGAAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: HVTFNCDPTIFSADK*RQLRGLPCPLQRRK Trigger: TTTTCTTCTTTGAAGTGGGCAGGGAAGCCCCCTGAGCTGTCTCCACTTATCTGCGCTAAATATGGTTGGGTCACAGTTGAATGTGACATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147990.2 |
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| 3UTR CCA 90 bp | AAGAAGAAAAGGTTTCCACTCTGTGAAAGAAGGCTTCTTTGCTTGTaGATTCCAATGGAGACTGTTCTGCTTGAGGCGATCCATCAACTG | + |
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Preference number: 1 (lower is better) Translates to: KKKRFPLCERRLLCL*IPMETVLLEAIHQL Trigger: CAGTTGATGGATCGCCTCAAGCAGAACAGTCTCCATTGGAATCCACAAGCAAAGAAGCCTTCTTTCACAGAGTGGAAACCTTTTCTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147990.2 |
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| 3UTR GCA 90 bp | ACTTCAAAGAAGAAAAGGTTTCCACTCTGTGAAAGAAGGCTTCTTTaGTTGTGGATTCCAATGGAGACTGTTCTGCTTGAGGCGATCCAT | + |
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Preference number: 1 (lower is better) Translates to: TSKKKRFPLCERRLL*LWIPMETVLLEAIH Trigger: ATGGATCGCCTCAAGCAGAACAGTCTCCATTGGAATCCACAAGCAAAGAAGCCTTCTTTCACAGAGTGGAAACCTTTTCTTCTTTGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147990.2 |
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| 3UTR-3UTR CCA 90 bp | AACAGCAGGCTCACCCAATGGCAACATCCCAAATCTGGAGAGGGGCTGTCTGGCACGTGGGCTGCAGGCTaGCACAGAGGAAAGCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: NSRLTQWQHPKSGEGLSGTWAAG*HRGKPG Trigger: GCCAGGCTTTCCTCTGTGCCAGCCTGCAGCCCACGT...GCCAGACAGCCCCTCTCCAGATTTGGGATGTTGCCATTGGGTGAGCCTGCTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147990.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGGGGATTCAGGCACCAGAGGGAAGTGTTCAGGCCGGCCCTCCACACCTGGAAGCAGGCTCACCCAATaGCAACATCCCAAATCTATC | + |
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Preference number: 2 (lower is better) Translates to: LGDSGTRGKCSGRPSTPGSRLTQ*QHPKSI Trigger: GATAGATTTGGGATGTTGCCATTGGGTGAGCCTGCT...TCCAGGTGTGGAGGGCCGGCCTGAACACTTCCCTCTGGTGCCTGAATCCCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
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| 3UTR-3UTR TCA 90 bp | GAACTGGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGCTATCGGGTGCAGTGAAACCAGAATaGAGAACAGCAGCAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: ELGLLCLTLSTPHTELSGAVKPE*RTAAAA Trigger: AGCTGCTGCTGCTGTTCTTCATTCTGGTTTCACTGC...ACCCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCCAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| 3UTR-3UTR GCA 90 bp | CTGACGGAACTGGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGCTAGATGAAGACTCCCACTaGCGGAATATTCGGAACACT | + |
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Preference number: 2 (lower is better) Translates to: LTELGLLCLTLSTPHTELDEDSH*RNIRNT Trigger: AGTGTTCCGAATATTCCGGCAGTGGGAGTCTTCATC...TAGCTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCCAGTTCCGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102992.10 |
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| 3UTR-3UTR CCA 90 bp | TCCTCCAGCAGGTGCAGCAGGGCACTGACCGCGTCTTCTGTCAAGCACATAGTTTGGAGAGGGGCTGTCTaGCCAAAAACAGAACTTCTC | + |
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Preference number: 2 (lower is better) Translates to: SSSRCSRALTASSVKHIVWRGAV*PKTELL Trigger: GAGAAGTTCTGTTTTTGGCCAGACAGCCCCTCTCCA...AACTATGTGCTTGACAGAAGACGCGGTCAGTGCCCTGCTGCACCTGCTGGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
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| 3UTR CAA 90 bp | CTCTGGCCTCAGAGAAGGAAGTTGGAGGTCCAAATGGCAAAGGCTTaGAAACCGGTCCAGGAACTCACTGATGAGAACAGCAGGCTCACC | + |
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Preference number: 2 (lower is better) Translates to: LWPQRRKLEVQMAKA*KPVQELTDENSRLT Trigger: GGTGAGCCTGCTGTTCTCATCAGTGAGTTCCTGGACCGGTTTCAAAGCCTTTGCCATTTGGACCTCCAACTTCCTTCTCTGAGGCCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
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| 3UTR-3UTR TCA 90 bp | CCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGGCAGTGAAACCAGAATaGAGAACAGCAGCAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: PTQSYRVSSSSSHAGLRMAVKPE*RTAAAA Trigger: AGCTGCTGCTGCTGTTCTTCATTCTGGTTTCACTGC...CATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| 3UTR-3UTR CCA 90 bp | TCCTCCAGCAGGTGCAGCAGGGCACTGACCGCGTCTTCTGTCAAGCACATAGTTCTCAGAGAAGGAAGTTaGAGGTCCAAATGGCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: SSSRCSRALTASSVKHIVLREGS*RSKWQR Trigger: CCTTTGCCATTTGGACCTCCAACTTCCTTCTCTGAG...AACTATGTGCTTGACAGAAGACGCGGTCAGTGCCCTGCTGCACCTGCTGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
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| 3UTR-3UTR TCA 90 bp | CTCACCCAATGGCAACATCCCAAATCTGGAGAGGGGCTGTCTGGCCAAAAACAGTGCACAAGGATTTCTTaGGCTCAGCACATCGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: LTQWQHPKSGEGLSGQKQCTRIS*AQHIAP Trigger: AGGAGCGATGTGCTGAGCTCAAGAAATCCTTGTGCA...CTGTTTTTGGCCAGACAGCCCCTCTCCAGATTTGGGATGTTGCCATTGGGTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147990.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTTACCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCAGCAGGCCTTCGCATGTaGAGTGAAACCAGAATGAAG | + |
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Preference number: 2 (lower is better) Translates to: VLPCPHPTQSYRVSSSSSAGLRM*SETRMK Trigger: CTTCATTCTGGTTTCACTGCACATGCGAAGGCCTGC...TGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| 3UTR-3UTR GCA 90 bp | GACGGAACTGGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGCTATCAGACTCTATTTCTGTTaGTGTATCCCTTCCCTACTC | + |
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Preference number: 2 (lower is better) Translates to: DGTGPAVSYPVHTPHRAIRLYFC*CIPSLL Trigger: GAGTAGGGAAGGGATACAGCAACAGAAATAGAGTCT...GATAGCTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCCAGTTCCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102992.10 |
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| 3UTR-3UTR CCA 90 bp | CTCACCCAATGGCAACATCCCAAATCTGGAGAGGGGCTGTCTGGCCAAAAACAGTGGAGAGGGGCTGTCTaGCCAAAAACAGAACTTCTC | + |
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Preference number: 2 (lower is better) Translates to: LTQWQHPKSGEGLSGQKQWRGAV*PKTELL Trigger: GAGAAGTTCTGTTTTTGGCCAGACAGCCCCTCTCCA...CTGTTTTTGGCCAGACAGCCCCTCTCCAGATTTGGGATGTTGCCATTGGGTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000147990.2 |
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| 3UTR-3UTR CCA 90 bp | ATGAGAACAGCAGGCTCACCCAATGGCAACATCCCAAATCTGGAGAGGGGCTGTCAACTGACTGGAATGTaGCAGCTGTGTCCTTTAGCC | + |
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Preference number: 2 (lower is better) Translates to: MRTAGSPNGNIPNLERGCQLTGM*QLCPLA Trigger: GGCTAAAGGACACAGCTGCCACATTCCAGTCAGTTG...ACAGCCCCTCTCCAGATTTGGGATGTTGCCATTGGGTGAGCCTGCTGTTCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147990.2 |
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| 3UTR-3UTR TCA 90 bp | GCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGTGCAGTGAAAGCAGTGAAACCAGAATaGAGAACAGCAGCAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: AIGSPLHHHMQAFACAVKAVKPE*RTAAAA Trigger: AGCTGCTGCTGCTGTTCTTCATTCTGGTTTCACTGC...TTTCACTGCACATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| 3UTR-3UTR TCA 90 bp | AGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGTGCAGTGAAGCAGTGAAACCAGAATaGAGAACAGCAGCAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: SYRVSSSSSHAGLRMCSEAVKPE*RTAAAA Trigger: AGCTGCTGCTGCTGTTCTTCATTCTGGTTTCACTGC...TTCACTGCACATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| 3UTR-3UTR TCA 90 bp | TACCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCCTTCGCATGTGCAGTaGAACCAGAATGAAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: YPVHTPHRAIGSPLHHHMPSHVQ*NQNEEQ Trigger: CTGTTCTTCATTCTGGTTTCACTGCACATGCGAAGG...CATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCAGCAGCAGCTGACCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCAGGCAGGCCTTCGCATGTaGAGTGAAACCAGAATGAAG | + |
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Preference number: 2 (lower is better) Translates to: QQQQLTKGTQTCLSKSPQAGLRM*SETRMK Trigger: CTTCATTCTGGTTTCACTGCACATGCGAAGGCCTGC...CTGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGTCAGCTGCTGCTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| 3UTR CAA 90 bp | TGTCAAGCACATAGTTTTCAAGTCCTCTGGCCTCAGAGAAGGAAGTaGGAGGTCCAAATGGCAAAGGCTTTGAAACCGGTCCAGGAACTC | + |
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Preference number: 2 (lower is better) Translates to: CQAHSFQVLWPQRRK*EVQMAKALKPVQEL Trigger: GAGTTCCTGGACCGGTTTCAAAGCCTTTGCCATTTGGACCTCCAACTTCCTTCTCTGAGGCCAGAGGACTTGAAAACTATGTGCTTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGATCTGTCATGGATGATTCAATCTGCTGAAAGCCCCAGAGACCGACCTTCCAAACAGAACTTCTCATaGGCACTGCACAAGGATTTC | + |
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Preference number: 2 (lower is better) Translates to: PDLSWMIQSAESPRDRPSKQNFS*ALHKDF Trigger: GAAATCCTTGTGCAGTGCCCATGAGAAGTTCTGTTT...GGAAGGTCGGTCTCTGGGGCTTTCAGCAGATTGAATCATCCATGACAGATCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGCTGGAGCACTTGAGCATGTCACATTCAACTGTGACCCAACCATATTTAGATCCATCAACTGACTaGAATGTGGCAGCTGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: WQLEHLSMSHSTVTQPYLDPSTD*NVAAVS Trigger: GGACACAGCTGCCACATTCCAGTCAGTTGATGGATC...TAAATATGGTTGGGTCACAGTTGAATGTGACATGCTCAAGTGCTCCAGCTGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147990.2 |
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| 3UTR CAA 90 bp | TCTGGCCAAAAACAGAACTTCTCATGGGCACTGCACAAGGATTTCTaGAGCTCAGCACATCGCTCCTTATATCTGCCAAAGTCAAACGTG | + |
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Preference number: 2 (lower is better) Translates to: SGQKQNFSWALHKDF*SSAHRSLYLPKSNV Trigger: CACGTTTGACTTTGGCAGATATAAGGAGCGATGTGCTGAGCTCAAGAAATCCTTGTGCAGTGCCCATGAGAAGTTCTGTTTTTGGCCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147990.2 |
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| 3UTR-3UTR GCA 90 bp | TTTATTAAGAAATACTGTCACATTGCTGAGCTACATGCTCAGAACACTGCCGAACTCTTCATCATCACATaGAGGCCTTCGCATGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: FIKKYCHIAELHAQNTAELFIIT*RPSHVQ Trigger: CTGCACATGCGAAGGCCTGCATGTGATGATGAAGAG...TTCGGCAGTGTTCTGAGCATGTAGCTCAGCAATGTGACAGTATTTCTTAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
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| 3UTR-3UTR CCA 90 bp | CTTGAGCATGTCACATTCAACTGTGACCCAACCATATTTAGCGCAGATAAGTGGAAACAGAACTTCTCATaGGCACTGCACAAGGATTTC | + |
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Preference number: 2 (lower is better) Translates to: LEHVTFNCDPTIFSADKWKQNFS*ALHKDF Trigger: GAAATCCTTGTGCAGTGCCCATGAGAAGTTCTGTTT...CCACTTATCTGCGCTAAATATGGTTGGGTCACAGTTGAATGTGACATGCTCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147990.2 |
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| 3UTR CCA 72 bp | CACCAGAGGGAAGTGTTCAGGCCGGCCCTCCACACCTaGAATCGGGGAGCTGGTCAGGCCAAAGGAAGCCTC | + |
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Preference number: 3 (lower is better) Translates to: HQREVFRPALHT*NRGAGQAKGSL Trigger: GAGGCTTCCTTTGGCCTGACCAGCTCCCCGATTCCAGGTGTGGAGGGCCGGCCTGAACACTTCCCTCTGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
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| 3UTR TCA 72 bp | AAGCCGCTGAATGGGTGTTCTAACCCTGCAGTCCCCTaGCGGAACTGGGCCTGCTGTGTCTTACCCTGTCCA | + |
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Preference number: 3 (lower is better) Translates to: KPLNGCSNPAVP*RNWACCVLPCP Trigger: TGGACAGGGTAAGACACAGCAGGCCCAGTTCCGTCAGGGGACTGCAGGGTTAGAACACCCATTCAGCGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
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| 3UTR GCA 72 bp | CATCGCTCCTTATATCTGCCAAAGTCAAACGTGGGCTaGAGGCTGGCACAGAGGAAAGCCTGGCAGCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: HRSLYLPKSNVG*RLAQRKAWQLE Trigger: CTCCAGCTGCCAGGCTTTCCTCTGTGCCAGCCTGCAGCCCACGTTTGACTTTGGCAGATATAAGGAGCGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147990.2 |
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| 3UTR CCA 72 bp | GCCCAGCCGCACAGAGAGAGAACACACGCAGTGGCTTaGACTTGGACGTCGGAGCCTAACTTGCTTGTAGTT | + |
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Preference number: 3 (lower is better) Translates to: AQPHRERTHAVA*TWTSEPNLLVV Trigger: AACTACAAGCAAGTTAGGCTCCGACGTCCAAGTCCAAGCCACTGCGTGTGTTCTCTCTCTGTGCGGCTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
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| 3UTR CCA 72 bp | TCAGACTGCTCAGAGCCTGGAGAAACTGTAGCATCCTaGCTTCGGGTCATCATCCGCCTAGGGGATTCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SDCSEPGETVAS*LRVIIRLGDSG Trigger: GCCTGAATCCCCTAGGCGGATGATGACCCGAAGCCAGGATGCTACAGTTTCTCCAGGCTCTGAGCAGTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
||
| 3UTR TCA 72 bp | GGTCAGGCCAAAGGAAGCCTCCAGATCTGTCATGGATaGTTCAATCTGCTGAAAGCCCCAGAGACCGACCTT | + |
|
Preference number: 3 (lower is better) Translates to: GQAKGSLQICHG*FNLLKAPETDL Trigger: AAGGTCGGTCTCTGGGGCTTTCAGCAGATTGAATCATCCATGACAGATCTGGAGGCTTCCTTTGGCCTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
||
| 3UTR CCA 72 bp | GAGCCTAACTTGCTTGTAGTTTTCCTGTCATCGGCGTaGAAATCAAGCTCATCCTCCAGCAGGTGCAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: EPNLLVVFLSSA*KSSSSSSRCSR Trigger: CCTGCTGCACCTGCTGGAGGATGAGCTTGATTTCCACGCCGATGACAGGAAAACTACAAGCAAGTTAGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
||
| 3UTR CCA 72 bp | AGCTGGTCAGGCCAAAGGAAGCCTCCAGATCTGTCATaGATGATTCAATCTGCTGAAAGCCCCAGAGACCGA | + |
|
Preference number: 3 (lower is better) Translates to: SWSGQRKPPDLS*MIQSAESPRDR Trigger: TCGGTCTCTGGGGCTTTCAGCAGATTGAATCATCCATGACAGATCTGGAGGCTTCCTTTGGCCTGACCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
||
| 3UTR-3UTR CAA 90 bp | GACGGAACTGGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGCTATCCAAAGGAACTCAGACTaGTTTATCAAAGTCCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: DGTGPAVSYPVHTPHRAIQRNSD*FIKVPS Trigger: TGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTG...GATAGCTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCCAGTTCCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTTGTAGTTTTCCTGTCATCGGCGTGGAAATCAAGCTCATCCTCCAGCAGGTGCCTCAGAGAAGGAAGTaGGAGGTCCAAATGGCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: ACSFPVIGVEIKLILQQVPQRRK*EVQMAK Trigger: CTTTGCCATTTGGACCTCCAACTTCCTTCTCTGAGG...CACCTGCTGGAGGATGAGCTTGATTTCCACGCCGATGACAGGAAAACTACAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
||
| 3UTR TCA 72 bp | CACATGCAGGCCTTCGCATGTGCAGTGAAACCAGAATaGAGAACAGCAGCAGCAGCTGACCAAAGGAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: HMQAFACAVKPE*RTAAAADQRNS Trigger: TGAGTTCCTTTGGTCAGCTGCTGCTGCTGTTCTTCATTCTGGTTTCACTGCACATGCGAAGGCCTGCATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| 3UTR TCA 72 bp | GAAGCCTCCAGATCTGTCATGGATGATTCAATCTGCTaGAAGCCCCAGAGACCGACCTTCCTCATACACTGG | + |
|
Preference number: 3 (lower is better) Translates to: EASRSVMDDSIC*KPQRPTFLIHW Trigger: CCAGTGTATGAGGAAGGTCGGTCTCTGGGGCTTTCAGCAGATTGAATCATCCATGACAGATCTGGAGGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
||
| 3UTR GCA 72 bp | GTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGTaGAGTGAAACCAGAATGAAGAACAGCAGCAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VSSSSSHAGLRM*SETRMKNSSSS Trigger: GCTGCTGCTGCTGTTCTTCATTCTGGTTTCACTGCACATGCGAAGGCCTGCATGTGATGATGAAGAGGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| 3UTR CCA 72 bp | TTCAACTGTGACCCAACCATATTTAGCGCAGATAAGTaGAGACAGCTCAGGGGGCTTCCCTGCCCACTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: FNCDPTIFSADK*RQLRGLPCPLQ Trigger: TTGAAGTGGGCAGGGAAGCCCCCTGAGCTGTCTCCACTTATCTGCGCTAAATATGGTTGGGTCACAGTTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147990.2 |
||
| 3UTR CCA 72 bp | CCAATGGCAACATCCCAAATCTGGAGAGGGGCTGTCTaGCCAAAAACAGAACTTCTCATGGGCACTGCACAA | + |
|
Preference number: 3 (lower is better) Translates to: PMATSQIWRGAV*PKTELLMGTAQ Trigger: TTGTGCAGTGCCCATGAGAAGTTCTGTTTTTGGCCAGACAGCCCCTCTCCAGATTTGGGATGTTGCCATTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147990.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTCAAAGGAACTCAGACTaGTTTATCAAAGTCCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: STPHTELSGLLFIITCRPQRNSD*FIKVPS Trigger: TGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTG...AGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| 3UTR CCA 72 bp | TGGCAACATCCCAAATCTATCTGGAGAGGGGCTGTCTaGCCAAAAACAGAACTTCTCATGGGCACTGCACAA | + |
|
Preference number: 3 (lower is better) Translates to: WQHPKSIWRGAV*PKTELLMGTAQ Trigger: TTGTGCAGTGCCCATGAGAAGTTCTGTTTTTGGCCAGACAGCCCCTCTCCAGATAGATTTGGGATGTTGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTACCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACAAAGGAACTCAGACTaGTTTATCAAAGTCCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: VLPCPHPTQSYRVSSSSSQRNSD*FIKVPS Trigger: TGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTG...TGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCACTTGAGCATGTCACATTCAACTGTGACCCAACCATATTTAGCGCAGATCTGCACAAGGATTTCTaGAGCTCAGCACATCGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GALEHVTFNCDPTIFSADLHKDF*SSAHRS Trigger: GGAGCGATGTGCTGAGCTCAAGAAATCCTTGTGCAG...ATCTGCGCTAAATATGGTTGGGTCACAGTTGAATGTGACATGCTCAAGTGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147990.2 |
||
| 3UTR GCA 72 bp | CCGGAGCATCTTCACGATGAGGATGAAGACTCCCACTaGCGGAATATTCGGAACACTTTCCTTGATTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: PEHLHDEDEDSH*RNIRNTFLDFS Trigger: TGAAAAATCAAGGAAAGTGTTCCGAATATTCCGGCAGTGGGAGTCTTCATCCTCATCGTGAAGATGCTCCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102992.10 |
||
| 3UTR CCA 72 bp | AGGTTTCCACTCTGTGAAAGAAGGCTTCTTTGCTTGTaGATTCCAATGGAGACTGTTCTGCTTGAGGCGATC | + |
|
Preference number: 3 (lower is better) Translates to: RFPLCERRLLCL*IPMETVLLEAI Trigger: GATCGCCTCAAGCAGAACAGTCTCCATTGGAATCCACAAGCAAAGAAGCCTTCTTTCACAGAGTGGAAACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147990.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTATTAAGAAATACTGTCACATTGCTGAGCTACATGCTCAGAACACTGCCGAATTCGGAACACTTTCCTaGATTTTTCAGAGAGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: FIKKYCHIAELHAQNTAEFGTLS*IFQRDS Trigger: AGAGTCTCTCTGAAAAATCAAGGAAAGTGTTCCGAA...TTCGGCAGTGTTCTGAGCATGTAGCTCAGCAATGTGACAGTATTTCTTAATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102992.10 |
||
| CDS-3UTR CCA 90 bp | CCCCTGACGGAACTGGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGCACTGCCTTCCAACCTaGCTCTGCTGGGGTACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLTELGLLCLTLSTPHTEHCLPT*LCWGTG Trigger: GCCTGTACCCCAGCAGAGCCAGGTTGGAAGGCAGTG...CTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCCAGTTCCGTCAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | TCCCCTGACGGAACTGGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGCCGGTCAACAGGACTaGAAGACTCCCAACTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPDGTGPAVSYPVHTPHRAGQQD*KTPNSG Trigger: CCCGGAGTTGGGAGTCTTCCAGTCCTGTTGACCGGC...TCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCCAGTTCCGTCAGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | CTGACGGAACTGGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGCTAAGAGGCGAGCTCGCTTaGTTCTCCGGAGAGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LTELGLLCLTLSTPHTELRGELA*FSGEGS Trigger: CGAGCCCTCTCCGGAGAACCAAGCGAGCTCGCCTCT...TAGCTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCCAGTTCCGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | GGTGTTCTAACCCTGCAGTCCCCTGACGGAACTGGGCCTGCTGTGTCTTACCCTGCCGGTCAACAGGACTaGAAGACTCCCAACTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GVLTLQSPDGTGPAVSYPAGQQD*KTPNSG Trigger: CCCGGAGTTGGGAGTCTTCCAGTCCTGTTGACCGGC...AGGGTAAGACACAGCAGGCCCAGTTCCGTCAGGGGACTGCAGGGTTAGAACACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | GGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTAGGTGTCAGAGCTGCTaGAAGAGCAGAGGCGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPAVSYPVHTPHRAIGSPRCQSC*KSRGEL Trigger: GAGCTCGCCTCTGCTCTTCCAGCAGCTCTGACACCT...AGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | CGGAACTGGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGCTATCGGAGGTGTCAGAGCTGCTaGAAGAGCAGAGGCGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RNWACCVLPCPHPTQSYRRCQSC*KSRGEL Trigger: GAGCTCGCCTCTGCTCTTCCAGCAGCTCTGACACCT...CCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCCAGTTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | GTTCTAACCCTGCAGTCCCCTGACGGAACTGGGCCTGCTGTGTCTTACCCTGTCCACTGCCTTCCAACCTaGCTCTGCTGGGGTACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLTLQSPDGTGPAVSYPVHCLPT*LCWGTG Trigger: GCCTGTACCCCAGCAGAGCCAGGTTGGAAGGCAGTG...GACAGGGTAAGACACAGCAGGCCCAGTTCCGTCAGGGGACTGCAGGGTTAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | GGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTGGCAGCTGTGTCCTTTaGTTCTGTGCCTCCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPAVSYPVHTPHRAIGSPGSCVL*FCASLF Trigger: GAAGAGGGAGGCACAGAACCAAAGGACACAGCTGCC...AGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | ACGGAACTGGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGCTATCGCTGGAATCGGGGAGCTaGTCAGGCCAAAGGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TELGLLCLTLSTPHTELSLESGS*SGQRKP Trigger: AGGCTTCCTTTGGCCTGACCAGCTCCCCGATTCCAG...CGATAGCTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCCAGTTCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 |
||
| CDS-3UTR CCA 90 bp | CCCCTGACGGAACTGGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGGAAACTGTAGCATCCTaGCTTCGGGTCATCATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PLTELGLLCLTLSTPHTEETVAS*LRVIIR Trigger: GCGGATGATGACCCGAAGCCAGGATGCTACAGTTTC...CTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCCAGTTCCGTCAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | CCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGAGAGGCGAGCTCGCTTaGTTCTCCGGAGAGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PVHTPHRAIGSPLHHHMQRGELA*FSGEGS Trigger: CGAGCCCTCTCCGGAGAACCAAGCGAGCTCGCCTCT...CTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
||
| CDS-3UTR GCA 90 bp | TCCCCTGACGGAACTGGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGATGTCCTTTGGTTCTGTaGCTCCCTCTTCCGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: SPDGTGPAVSYPVHTPHRCPLVL*LPLPGQ Trigger: TTGTCCCGGAAGAGGGAGGCACAGAACCAAAGGACA...TCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCCAGTTCCGTCAGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR GCA 90 bp | CCTGACGGAACTGGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGCTAAGTCAAACGTGGGCTaGAGGCTGGCACAGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PDGTGPAVSYPVHTPHRAKSNVG*RLAQRK Trigger: TTTCCTCTGTGCCAGCCTGCAGCCCACGTTTGACTT...AGCTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCCAGTTCCGTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | CTGACGGAACTGGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGCTAGGCAGCTGTGTCCTTTaGTTCTGTGCCTCCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTELGLLCLTLSTPHTELGSCVL*FCASLF Trigger: GAAGAGGGAGGCACAGAACCAAAGGACACAGCTGCC...TAGCTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCCAGTTCCGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | CTTACCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACAACGTGGGCTGCAGGCTaGCACAGAGGAAAGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTLSTPHTELSGLLFIITTWAAG*HRGKPG Trigger: GCCAGGCTTTCCTCTGTGCCAGCCTGCAGCCCACGT...TGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGTGCAGTAGAGGCGAGCTCGCTTaGTTCTCCGGAGAGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QSYRVSSSSSHAGLRMCSRGELA*FSGEGS Trigger: CGAGCCCTCTCCGGAGAACCAAGCGAGCTCGCCTCT...ACTGCACATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | CCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCACTGCCTTCCAACCTaGCTCTGCTGGGGTACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PHPTQSYRVSSSSSHAGLHCLPT*LCWGTG Trigger: GCCTGTACCCCAGCAGAGCCAGGTTGGAAGGCAGTG...AAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR TCA 90 bp | GGTGTTCTAACCCTGCAGTCCCCTGACGGAACTGGGCCTGCTGTGTCTTACCCTGGCAGCTGGAGCACTTaGGCATGTCACATTCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: GVLTLQSPDGTGPAVSYPGSWST*ACHIQL Trigger: CAGTTGAATGTGACATGCTCAAGTGCTCCAGCTGCC...AGGGTAAGACACAGCAGGCCCAGTTCCGTCAGGGGACTGCAGGGTTAGAACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
||
| CDS-3UTR GCA 90 bp | CTGTGTCTTACCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCCTTCCAACCTGGCTCTaGTGGGGTACAGGCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LCLTLSTPHTELSGLLFILPTWL*WGTGIH Trigger: GTGGATGCCTGTACCCCAGCAGAGCCAGGTTGGAAG...GATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAGACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR GCA 90 bp | CACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCCGGGGAGAGGTGTCCTaGTCAGAGCCTGGAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: HTPHRAIGSPLHHHMQAFRGEVS*SEPGET Trigger: AGTTTCTCCAGGCTCTGAGCAGGACACCTCTCCCCG...GAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115184.2 |
||
| CDS-3UTR CCA 90 bp | CACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCTGCCAAAGTCAAACGTaGGCTGCAGGCTGGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: HPTQSYRVSSSSSHAGLRCQSQT*AAGWHR Trigger: TCTGTGCCAGCCTGCAGCCCACGTTTGACTTTGGCA...GCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | CCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGCTGGAATCGGGGAGCTaGTCAGGCCAAAGGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PVHTPHRAIGSPLHHHMQLESGS*SGQRKP Trigger: AGGCTTCCTTTGGCCTGACCAGCTCCCCGATTCCAG...CTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTTACCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCCATGCTTCGGGTCACTaGGCGGCTCCTGGTAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLTLSTPHTELSGLLFIIHASGH*AAPGSR Trigger: CCTACTACCAGGAGCCGCCCAGTGACCCGAAGCATG...GATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | GGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTTGGTTAGAACGCTTGTaGGCCAACAGGATGGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: GPAVSYPVHTPHRAIGSPWLERL*ANRMVN Trigger: GTTGACCATCCTGTTGGCCCACAAGCGTTCTAACCA...AGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | CCCCTGACGGAACTGGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGTTTCAGAGAGACTCATaGAGTCTGTCTCAGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLTELGLLCLTLSTPHTEFQRDS*SLSQLA Trigger: AGCCAGCTGAGACAGACTCCATGAGTCTCTCTGAAA...CTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCCAGTTCCGTCAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR TCA 90 bp | GTTCTAACCCTGCAGTCCCCTGACGGAACTGGGCCTGCTGTGTCTTACCCTGTCTGCACAAGGATTTCTTaGGCTCAGCACATCGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLTLQSPDGTGPAVSYPVCTRIS*AQHIAP Trigger: AGGAGCGATGTGCTGAGCTCAAGAAATCCTTGTGCA...GACAGGGTAAGACACAGCAGGCCCAGTTCCGTCAGGGGACTGCAGGGTTAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
||
| CDS-3UTR TCA 90 bp | CCCCTGACGGAACTGGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGCAGATCTGTCATGGATaGTTCAATCTGCTGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLTELGLLCLTLSTPHTEQICHG*FNLLKA Trigger: GGCTTTCAGCAGATTGAATCATCCATGACAGATCTG...CTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCCAGTTCCGTCAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 |
||
| CDS-3UTR GCA 90 bp | CTTACCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACAAATCTCCTGTTCCCATaGTTCGGGTCACTGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTLSTPHTELSGLLFIITNLLFP*FGSLGG Trigger: GCCGCCCAGTGACCCGAAGCATGGGAACAGGAGATT...TGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
||
| CDS-3UTR GCA 90 bp | CTTACCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACACTTCCAACCTGGCTCTaGTGGGGTACAGGCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTLSTPHTELSGLLFIITLPTWL*WGTGIH Trigger: GTGGATGCCTGTACCCCAGCAGAGCCAGGTTGGAAG...TGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS-3UTR GCA 90 bp | GGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTGATGAAGACTCCCACTaGCGGAATATTCGGAACACT | + |
|
Preference number: 4 (lower is better) Translates to: GPAVSYPVHTPHRAIGSPDEDSH*RNIRNT Trigger: AGTGTTCCGAATATTCCGGCAGTGGGAGTCTTCATC...AGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | AATACTGTCACATTGCTGAGCTACATGCTCAGAACACTGCCGAACCAAAGCCGCACGTGGGCTGCAGGCTaGCACAGAGGAAAGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NTVTLLSYMLRTLPNQSRTWAAG*HRGKPG Trigger: GCCAGGCTTTCCTCTGTGCCAGCCTGCAGCCCACGT...GCGGCTTTGGTTCGGCAGTGTTCTGAGCATGTAGCTCAGCAATGTGACAGTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | CCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGTGCCAAAGTCAAACGTaGGCTGCAGGCTGGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTQSYRVSSSSSHAGLRMCQSQT*AAGWHR Trigger: TCTGTGCCAGCCTGCAGCCCACGTTTGACTTTGGCA...CATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | CACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGTGCTGGAATCGGGGAGCTaGTCAGGCCAAAGGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HTELSGLLFIITCRPSHVLESGS*SGQRKP Trigger: AGGCTTCCTTTGGCCTGACCAGCTCCCCGATTCCAG...CACATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTACCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCAAGGTGTCAGAGCTGCTaGAAGAGCAGAGGCGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLPCPHPTQSYRVSSSSSRCQSC*KSRGEL Trigger: GAGCTCGCCTCTGCTCTTCCAGCAGCTCTGACACCT...TGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | GCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTGGTTAGAACGCTTGTaGGCCAACAGGATGGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ACCVLPCPHPTQSYRVSSWLERL*ANRMVN Trigger: GTTGACCATCCTGTTGGCCCACAAGCGTTCTAACCA...AGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS-3UTR TCA 90 bp | CCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGGCAGCTGGAGCACTTaGGCATGTCACATTCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: PVHTPHRAIGSPLHHHMQGSWST*ACHIQL Trigger: CAGTTGAATGTGACATGCTCAAGTGCTCCAGCTGCC...CTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR TCA 90 bp | GGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCAGATCTGTCATGGATaGTTCAATCTGCTGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GPAVSYPVHTPHRAIGSPQICHG*FNLLKA Trigger: GGCTTTCAGCAGATTGAATCATCCATGACAGATCTG...AGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 |
||
| CDS-3UTR GCA 90 bp | CCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAAAGTCAAACGTGGGCTaGAGGCTGGCACAGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PCPHPTQSYRVSSSSSHAKSNVG*RLAQRK Trigger: TTTCCTCTGTGCCAGCCTGCAGCCCACGTTTGACTT...TGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR GCA 90 bp | CTGTGTCTTACCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCAAGTCAAACGTGGGCTaGAGGCTGGCACAGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LCLTLSTPHTELSGLLFIKSNVG*RLAQRK Trigger: TTTCCTCTGTGCCAGCCTGCAGCCCACGTTTGACTT...GATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAGACACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | ACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGTGCGGCAGCTGTGTCCTTTaGTTCTGTGCCTCCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQSYRVSSSSSHAGLRMCGSCVL*FCASLF Trigger: GAAGAGGGAGGCACAGAACCAAAGGACACAGCTGCC...GCACATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | AGAACAGCAGCAGCAGCTGACCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCACGTGGGCTGCAGGCTaGCACAGAGGAAAGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RTAAAADQRNSDLFIKVPTWAAG*HRGKPG Trigger: GCCAGGCTTTCCTCTGTGCCAGCCTGCAGCCCACGT...GGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGTCAGCTGCTGCTGCTGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | AAATACTGTCACATTGCTGAGCTACATGCTCAGAACACTGCCGAACCAAAGCCGACGTGGGCTGCAGGCTaGCACAGAGGAAAGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KYCHIAELHAQNTAEPKPTWAAG*HRGKPG Trigger: GCCAGGCTTTCCTCTGTGCCAGCCTGCAGCCCACGT...CGGCTTTGGTTCGGCAGTGTTCTGAGCATGTAGCTCAGCAATGTGACAGTATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | TCCCCTGACGGAACTGGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAAGTTTTCAAGTCCTCTaGCCTCAGAGAAGGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPDGTGPAVSYPVHTPHRSFQVL*PQRRKL Trigger: CAACTTCCTTCTCTGAGGCCAGAGGACTTGAAAACT...TCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCCAGTTCCGTCAGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | CCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTGAAACTGTAGCATCCTaGCTTCGGGTCATCATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PHPTQSYRVSSSSSHAGLETVAS*LRVIIR Trigger: GCGGATGATGACCCGAAGCCAGGATGCTACAGTTTC...AAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | ATGGGTGTTCTAACCCTGCAGTCCCCTGACGGAACTGGGCCTGCTGTGTCTTACAGACTGCTCAGAGCCTaGAGAAACTGTAGCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MGVLTLQSPDGTGPAVSYRLLRA*RNCSIL Trigger: CAGGATGCTACAGTTTCTCCAGGCTCTGAGCAGTCT...GTAAGACACAGCAGGCCCAGTTCCGTCAGGGGACTGCAGGGTTAGAACACCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | CAGCAGCAGCAGCTGACCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCAGCATGCTTCGGGTCACTaGGCGGCTCCTGGTAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: QQQQLTKGTQTCLSKSPQHASGH*AAPGSR Trigger: CCTACTACCAGGAGCCGCCCAGTGACCCGAAGCATG...CTGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGTCAGCTGCTGCTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | TGTCACATTGCTGAGCTACATGCTCAGAACACTGCCGAACCAAAGCCGCTGAATCACTGCCTTCCAACCTaGCTCTGCTGGGGTACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CHIAELHAQNTAEPKPLNHCLPT*LCWGTG Trigger: GCCTGTACCCCAGCAGAGCCAGGTTGGAAGGCAGTG...ATTCAGCGGCTTTGGTTCGGCAGTGTTCTGAGCATGTAGCTCAGCAATGTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
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| CDS-3UTR TCA 90 bp | CATGCAGGCCTTCGCATGTGCAGTGAAACCAGAATGAAGAACAGCAGCAGCAGCGGCAGCTGGAGCACTTaGGCATGTCACATTCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: HAGLRMCSETRMKNSSSSGSWST*ACHIQL Trigger: CAGTTGAATGTGACATGCTCAAGTGCTCCAGCTGCC...GCTGCTGCTGCTGTTCTTCATTCTGGTTTCACTGCACATGCGAAGGCCTGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS-3UTR GCA 90 bp | CAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGTGCAGTTGTCCTTTGGTTCTGTaGCTCCCTCTTCCGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: QSYRVSSSSSHAGLRMCSCPLVL*LPLPGQ Trigger: TTGTCCCGGAAGAGGGAGGCACAGAACCAAAGGACA...ACTGCACATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS-3UTR GCA 90 bp | CCTGACGGAACTGGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGCTGAAAGAAGGCTTCTTTaGTTGTGGATTCCAATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PDGTGPAVSYPVHTPHRAERRLL*LWIPME Trigger: CTCCATTGGAATCCACAAGCAAAGAAGCCTTCTTTC...AGCTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCCAGTTCCGTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS-3UTR GCA 90 bp | AATACTGTCACATTGCTGAGCTACATGCTCAGAACACTGCCGAACCAAAGCCGCCTTCCAACCTGGCTCTaGTGGGGTACAGGCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NTVTLLSYMLRTLPNQSRLPTWL*WGTGIH Trigger: GTGGATGCCTGTACCCCAGCAGAGCCAGGTTGGAAG...GCGGCTTTGGTTCGGCAGTGTTCTGAGCATGTAGCTCAGCAATGTGACAGTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | TACTGTCACATTGCTGAGCTACATGCTCAGAACACTGCCGAACCAAAGCCGCTGGGCAGCTGTGTCCTTTaGTTCTGTGCCTCCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YCHIAELHAQNTAEPKPLGSCVL*FCASLF Trigger: GAAGAGGGAGGCACAGAACCAAAGGACACAGCTGCC...CAGCGGCTTTGGTTCGGCAGTGTTCTGAGCATGTAGCTCAGCAATGTGACAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | CCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGATCCATCAACTGACTaGAATGTGGCAGCTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PVHTPHRAIGSPLHHHMQDPSTD*NVAAVS Trigger: GGACACAGCTGCCACATTCCAGTCAGTTGATGGATC...CTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | CACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCAGCAGGCTCACCCAATaGCAACATCCCAAATCTATC | + |
|
Preference number: 4 (lower is better) Translates to: HPTQSYRVSSSSSHAGLRSRLTQ*QHPKSI Trigger: GATAGATTTGGGATGTTGCCATTGGGTGAGCCTGCT...GCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | TGTCTTACCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCGAAACTGTAGCATCCTaGCTTCGGGTCATCATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: CLTLSTPHTELSGLLFIIETVAS*LRVIIR Trigger: GCGGATGATGACCCGAAGCCAGGATGCTACAGTTTC...GATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | AGAACAGCAGCAGCAGCTGACCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCGCCGGTCAACAGGACTaGAAGACTCCCAACTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RTAAAADQRNSDLFIKVPAGQQD*KTPNSG Trigger: CCCGGAGTTGGGAGTCTTCCAGTCCTGTTGACCGGC...GGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGTCAGCTGCTGCTGCTGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | CCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGCTCTATGCTGAGAGGTaGGATCAAAGAAGCTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTQSYRVSSSSSHAGLRMLYAER*DQRSFG Trigger: CCCGAAGCTTCTTTGATCCCACCTCTCAGCATAGAG...CATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | CCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCATGGTTAGAACGCTTGTaGGCCAACAGGATGGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PCPHPTQSYRVSSSSSHAWLERL*ANRMVN Trigger: GTTGACCATCCTGTTGGCCCACAAGCGTTCTAACCA...TGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| 3UTR CAA 72 bp | CACGCAGTGGCTTGGACTTGGACGTCGGAGCCTAACTaGCTTGTAGTTTTCCTGTCATCGGCGTGGAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: HAVAWTWTSEPN*LVVFLSSAWKS Trigger: TGATTTCCACGCCGATGACAGGAAAACTACAAGCAAGTTAGGCTCCGACGTCCAAGTCCAAGCCACTGCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
||
| 3UTR CAA 72 bp | AGGCTGGCACAGAGGAAAGCCTGGCAGCTGGAGCACTaGAGCATGTCACATTCAACTGTGACCCAACCATAT | + |
|
Preference number: 4 (lower is better) Translates to: RLAQRKAWQLEH*SMSHSTVTQPY Trigger: ATATGGTTGGGTCACAGTTGAATGTGACATGCTCAAGTGCTCCAGCTGCCAGGCTTTCCTCTGTGCCAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147990.2 |
||
| CDS-3UTR TCA 90 bp | GTCTTACCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCATGCACAAGGATTTCTTaGGCTCAGCACATCGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLPCPHPTQSYRVSSSSSCTRIS*AQHIAP Trigger: AGGAGCGATGTGCTGAGCTCAAGAAATCCTTGTGCA...TGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR GCA 90 bp | CAGCTGACCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCAGTTCTGTCCGAATCTCCTGTTCCCATaGTTCGGGTCACTGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QLTKGTQTCLSKSPQFCPNLLFP*FGSLGG Trigger: GCCGCCCAGTGACCCGAAGCATGGGAACAGGAGATT...CGGACAGAACTGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGTCAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
||
| CDS-3UTR GCA 90 bp | GACCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCAGTTCTGTCCGGAGCACTTCCAACCTGGCTCTaGTGGGGTACAGGCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DQRNSDLFIKVPSVLSGALPTWL*WGTGIH Trigger: GTGGATGCCTGTACCCCAGCAGAGCCAGGTTGGAAG...TGCTCCGGACAGAACTGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | ACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGTGCTGGAGAGGGGCTGTCTaGCCAAAAACAGAACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TQSYRVSSSSSHAGLRMCWRGAV*PKTELL Trigger: GAGAAGTTCTGTTTTTGGCCAGACAGCCCCTCTCCA...GCACATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | CATGCAGGCCTTCGCATGTGCAGTGAAACCAGAATGAAGAACAGCAGCAGCAGCTGGAGAGGGGCTGTCTaGCCAAAAACAGAACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HAGLRMCSETRMKNSSSSWRGAV*PKTELL Trigger: GAGAAGTTCTGTTTTTGGCCAGACAGCCCCTCTCCA...GCTGCTGCTGCTGTTCTTCATTCTGGTTTCACTGCACATGCGAAGGCCTGCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | ACCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCCTCAGAGAAGGAAGTTaGAGGTCCAAATGGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLSTPHTELSGLLFIITCLREGS*RSKWQR Trigger: CCTTTGCCATTTGGACCTCCAACTTCCTTCTCTGAG...GCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | CCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGCTCAGAGAAGGAAGTTaGAGGTCCAAATGGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVHTPHRAIGSPLHHHMQLREGS*RSKWQR Trigger: CCTTTGCCATTTGGACCTCCAACTTCCTTCTCTGAG...CTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR GCA 90 bp | CAGCAGCAGCAGCTGACCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCAGAAGTCAAACGTGGGCTaGAGGCTGGCACAGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QQQQLTKGTQTCLSKSPQKSNVG*RLAQRK Trigger: TTTCCTCTGTGCCAGCCTGCAGCCCACGTTTGACTT...CTGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGTCAGCTGCTGCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR GCA 90 bp | ACGATGAGGATGAAGACTCCCACTGCCGGAATATTCGGAACACTTTCCTTGATTAATCTCCTGTTCCCATaGTTCGGGTCACTGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TMRMKTPTAGIFGTLSLINLLFP*FGSLGG Trigger: GCCGCCCAGTGACCCGAAGCATGGGAACAGGAGATT...AATCAAGGAAAGTGTTCCGAATATTCCGGCAGTGGGAGTCTTCATCCTCATCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102992.10 |
||
| CDS-3UTR GCA 90 bp | GTCTTACCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCAGATGAAGACTCCCACTaGCGGAATATTCGGAACACT | + |
|
Preference number: 4 (lower is better) Translates to: VLPCPHPTQSYRVSSSSSDEDSH*RNIRNT Trigger: AGTGTTCCGAATATTCCGGCAGTGGGAGTCTTCATC...TGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR GCA 90 bp | TGTCTTACCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCGATGAAGACTCCCACTaGCGGAATATTCGGAACACT | + |
|
Preference number: 4 (lower is better) Translates to: CLTLSTPHTELSGLLFIIDEDSH*RNIRNT Trigger: AGTGTTCCGAATATTCCGGCAGTGGGAGTCTTCATC...GATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | CCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCAGTTCTGTCCGGAGCATCTGCCAAAGTCAAACGTaGGCTGCAGGCTGGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PKELRLVYQSPLSSVRSICQSQT*AAGWHR Trigger: TCTGTGCCAGCCTGCAGCCCACGTTTGACTTTGGCA...GATGCTCCGGACAGAACTGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | CAGCTGACCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCAGTTCTGTCCGTGCCAAAGTCAAACGTaGGCTGCAGGCTGGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLTKGTQTCLSKSPQFCPCQSQT*AAGWHR Trigger: TCTGTGCCAGCCTGCAGCCCACGTTTGACTTTGGCA...CGGACAGAACTGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGTCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | AGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGTGCAGTGAATGGAGAGGGGCTGTCTaGCCAAAAACAGAACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SYRVSSSSSHAGLRMCSEWRGAV*PKTELL Trigger: GAGAAGTTCTGTTTTTGGCCAGACAGCCCCTCTCCA...TTCACTGCACATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | ACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGAGTTTTCAAGTCCTCTaGCCTCAGAGAAGGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TPHTELSGLLFIITCRPSSFQVL*PQRRKL Trigger: CAACTTCCTTCTCTGAGGCCAGAGGACTTGAAAACT...CGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | TACTGTCACATTGCTGAGCTACATGCTCAGAACACTGCCGAACCAAAGCCGCTGCTCTATGCTGAGAGGTaGGATCAAAGAAGCTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: YCHIAELHAQNTAEPKPLLYAER*DQRSFG Trigger: CCCGAAGCTTCTTTGATCCCACCTCTCAGCATAGAG...CAGCGGCTTTGGTTCGGCAGTGTTCTGAGCATGTAGCTCAGCAATGTGACAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | CATGCAGGCCTTCGCATGTGCAGTGAAACCAGAATGAAGAACAGCAGCAGCAGCTTTCAGAGAGACTCATaGAGTCTGTCTCAGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HAGLRMCSETRMKNSSSSFQRDS*SLSQLA Trigger: AGCCAGCTGAGACAGACTCCATGAGTCTCTCTGAAA...GCTGCTGCTGCTGTTCTTCATTCTGGTTTCACTGCACATGCGAAGGCCTGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | CCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGAGGCTTCTTTGCTTGTaGATTCCAATGGAGACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PVHTPHRAIGSPLHHHMQRLLCL*IPMETV Trigger: AACAGTCTCCATTGGAATCCACAAGCAAAGAAGCCT...CTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | CCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAAAACAGAACTTCTCATaGGCACTGCACAAGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: PCPHPTQSYRVSSSSSHAKQNFS*ALHKDF Trigger: GAAATCCTTGTGCAGTGCCCATGAGAAGTTCTGTTT...TGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCAAACAGAACTTCTCATaGGCACTGCACAAGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: CPHPTQSYRVSSSSSHAGKQNFS*ALHKDF Trigger: GAAATCCTTGTGCAGTGCCCATGAGAAGTTCTGTTT...GCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | CAGCAGCAGCAGCTGACCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCAGTGGAGAGGGGCTGTCTaGCCAAAAACAGAACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QQQQLTKGTQTCLSKSPQWRGAV*PKTELL Trigger: GAGAAGTTCTGTTTTTGGCCAGACAGCCCCTCTCCA...CTGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGTCAGCTGCTGCTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | AGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGTGCAGTGAAAGCAGGCTCACCCAATaGCAACATCCCAAATCTATC | + |
|
Preference number: 4 (lower is better) Translates to: SYRVSSSSSHAGLRMCSESRLTQ*QHPKSI Trigger: GATAGATTTGGGATGTTGCCATTGGGTGAGCCTGCT...TTCACTGCACATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | ATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGTGCAGTGAAACCACTCAGAGAAGGAAGTTaGAGGTCCAAATGGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IGSPLHHHMQAFACAVKPLREGS*RSKWQR Trigger: CCTTTGCCATTTGGACCTCCAACTTCCTTCTCTGAG...TGGTTTCACTGCACATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | CCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCCTCCAGATCTGTCATaGATGATTCAATCTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PHPTQSYRVSSSSSHAGLPPDLS*MIQSAE Trigger: TTCAGCAGATTGAATCATCCATGACAGATCTGGAGG...AAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTGACCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCAGTTCTGTCCGGAAACTGTAGCATCCTaGCTTCGGGTCATCATCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QLTKGTQTCLSKSPQFCPETVAS*LRVIIR Trigger: GCGGATGATGACCCGAAGCCAGGATGCTACAGTTTC...CGGACAGAACTGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGTCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| 3UTR CAA 72 bp | AGAACAGCAGCAGCAGCTGACCAAAGGAACTCAGACTaGTTTATCAAAGTCCCCTCAGTTCTGTCCGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTAAAADQRNSD*FIKVPSVLSGA Trigger: TGCTCCGGACAGAACTGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGTCAGCTGCTGCTGCTGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| 3UTR CAA 72 bp | CAGAGAAGGAAGTTGGAGGTCCAAATGGCAAAGGCTTaGAAACCGGTCCAGGAACTCACTGATGAGAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: QRRKLEVQMAKA*KPVQELTDENS Trigger: GCTGTTCTCATCAGTGAGTTCCTGGACCGGTTTCAAAGCCTTTGCCATTTGGACCTCCAACTTCCTTCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136255.2 |
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| CDS-3UTR GCA 90 bp | ACCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCAGTTCTGTCCGGAGCATTGTCCTTTGGTTCTGTaGCTCCCTCTTCCGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: TKGTQTCLSKSPQFCPEHCPLVL*LPLPGQ Trigger: TTGTCCCGGAAGAGGGAGGCACAGAACCAAAGGACA...ATGCTCCGGACAGAACTGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS-3UTR GCA 90 bp | ACTTGTTTATCAAAGTCCCCTCAGTTCTGTCCGGAGCATCTTCACGATGAGGATTGTCCTTTGGTTCTGTaGCTCCCTCTTCCGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: TCLSKSPQFCPEHLHDEDCPLVL*LPLPGQ Trigger: TTGTCCCGGAAGAGGGAGGCACAGAACCAAAGGACA...ATCCTCATCGTGAAGATGCTCCGGACAGAACTGAGGGGACTTTGATAAACAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102992.10 |
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| CDS-3UTR CCA 90 bp | ACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGTGCAGGCTTCTTTGCTTGTaGATTCCAATGGAGACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TQSYRVSSSSSHAGLRMCRLLCL*IPMETV Trigger: AACAGTCTCCATTGGAATCCACAAGCAAAGAAGCCT...GCACATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | ACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGTGCAGAGGCTTCTTTGCTTGTaGATTCCAATGGAGACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TELSGLLFIITCRPSHVQRLLCL*IPMETV Trigger: AACAGTCTCCATTGGAATCCACAAGCAAAGAAGCCT...CTGCACATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | AGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGTGCAGTGAAACAGAACTTCTCATaGGCACTGCACAAGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: RAIGSPLHHHMQAFACAVKQNFS*ALHKDF Trigger: GAAATCCTTGTGCAGTGCCCATGAGAAGTTCTGTTT...CACTGCACATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | AATACTGTCACATTGCTGAGCTACATGCTCAGAACACTGCCGAACCAAAGCCGCAGCAGGCTCACCCAATaGCAACATCCCAAATCTATC | + |
|
Preference number: 4 (lower is better) Translates to: NTVTLLSYMLRTLPNQSRSRLTQ*QHPKSI Trigger: GATAGATTTGGGATGTTGCCATTGGGTGAGCCTGCT...GCGGCTTTGGTTCGGCAGTGTTCTGAGCATGTAGCTCAGCAATGTGACAGTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | AGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGTGCAGTGAAAGTTTTCAAGTCCTCTaGCCTCAGAGAAGGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SYRVSSSSSHAGLRMCSESFQVL*PQRRKL Trigger: CAACTTCCTTCTCTGAGGCCAGAGGACTTGAAAACT...TTCACTGCACATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | CTTACCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACACCTCCAGATCTGTCATaGATGATTCAATCTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LTLSTPHTELSGLLFIITPPDLS*MIQSAE Trigger: TTCAGCAGATTGAATCATCCATGACAGATCTGGAGG...TGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 |
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| CDS-3UTR CCA 90 bp | GAACAGCAGCAGCAGCTGACCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCTCTATGCTGAGAGGTaGGATCAAAGAAGCTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: EQQQQLTKGTQTCLSKSPLYAER*DQRSFG Trigger: CCCGAAGCTTCTTTGATCCCACCTCTCAGCATAGAG...AGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGTCAGCTGCTGCTGCTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | CCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCAGTTCTGTCCGGAGCATCCTCTATGCTGAGAGGTaGGATCAAAGAAGCTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PKELRLVYQSPLSSVRSILYAER*DQRSFG Trigger: CCCGAAGCTTCTTTGATCCCACCTCTCAGCATAGAG...GATGCTCCGGACAGAACTGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | CAGCAGCAGCAGCTGACCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCAGTTTCAGAGAGACTCATaGAGTCTGTCTCAGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QQQQLTKGTQTCLSKSPQFQRDS*SLSQLA Trigger: AGCCAGCTGAGACAGACTCCATGAGTCTCTCTGAAA...CTGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGTCAGCTGCTGCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | CCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCAGTTCTGTCCGGAGCATCAGCAGGCTCACCCAATaGCAACATCCCAAATCTATC | + |
|
Preference number: 4 (lower is better) Translates to: PKELRLVYQSPLSSVRSISRLTQ*QHPKSI Trigger: GATAGATTTGGGATGTTGCCATTGGGTGAGCCTGCT...GATGCTCCGGACAGAACTGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | TGTCACATTGCTGAGCTACATGCTCAGAACACTGCCGAACCAAAGCCGCTGAATAGTTTTCAAGTCCTCTaGCCTCAGAGAAGGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CHIAELHAQNTAEPKPLNSFQVL*PQRRKL Trigger: CAACTTCCTTCTCTGAGGCCAGAGGACTTGAAAACT...ATTCAGCGGCTTTGGTTCGGCAGTGTTCTGAGCATGTAGCTCAGCAATGTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | GAAGAACAGCAGCAGCAGCTGACCAAAGGAACTCAGACTTGTTTATCAAAGTCCAGACTGCTCAGAGCCTaGAGAAACTGTAGCATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EEQQQQLTKGTQTCLSKSRLLRA*RNCSIL Trigger: CAGGATGCTACAGTTTCTCCAGGCTCTGAGCAGTCT...GGACTTTGATAAACAAGTCTGAGTTCCTTTGGTCAGCTGCTGCTGCTGTTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
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| CDS-3UTR CCA 90 bp | ACCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCAGTTCTGTCCGGAGCATTGGTTAGAACGCTTGTaGGCCAACAGGATGGTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TKGTQTCLSKSPQFCPEHWLERL*ANRMVN Trigger: GTTGACCATCCTGTTGGCCCACAAGCGTTCTAACCA...ATGCTCCGGACAGAACTGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR TCA 90 bp | GAACAGCAGCAGCAGCTGACCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCAGATCTGTCATGGATaGTTCAATCTGCTGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EQQQQLTKGTQTCLSKSPQICHG*FNLLKA Trigger: GGCTTTCAGCAGATTGAATCATCCATGACAGATCTG...AGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGTCAGCTGCTGCTGCTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 |
||
| CDS-3UTR CCA 90 bp | CAGCAGCAGCAGCTGACCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCAGAGGCTTCTTTGCTTGTaGATTCCAATGGAGACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QQQQLTKGTQTCLSKSPQRLLCL*IPMETV Trigger: AACAGTCTCCATTGGAATCCACAAGCAAAGAAGCCT...CTGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGTCAGCTGCTGCTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | ACCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCAGTTCTGTCCGGAGCATCTCAGAGAAGGAAGTTaGAGGTCCAAATGGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TKGTQTCLSKSPQFCPEHLREGS*RSKWQR Trigger: CCTTTGCCATTTGGACCTCCAACTTCCTTCTCTGAG...ATGCTCCGGACAGAACTGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CCA 90 bp | GAACAGCAGCAGCAGCTGACCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCCTCCAGATCTGTCATaGATGATTCAATCTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EQQQQLTKGTQTCLSKSPPPDLS*MIQSAE Trigger: TTCAGCAGATTGAATCATCCATGACAGATCTGGAGG...AGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGTCAGCTGCTGCTGCTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 |
||
| CDS-3UTR CCA 90 bp | ACCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCAGTTCTGTCCGGAGCATAAACAGAACTTCTCATaGGCACTGCACAAGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: TKGTQTCLSKSPQFCPEHKQNFS*ALHKDF Trigger: GAAATCCTTGTGCAGTGCCCATGAGAAGTTCTGTTT...ATGCTCCGGACAGAACTGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS CCA 90 bp | GGGGAGAGGTGTCAGAGCTGCTGGAAGAGCAGAGGCGAGCTCGCTTaGTTCTCCGGAGAGGGCTCGAGGGAACTTCCACGCCAGCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GERCQSCWKSRGELA*FSGEGSRELPRQQN Trigger: ATTCTGCTGGCGTGGAAGTTCCCTCGAGCCCTCTCCGGAGAACCAAGCGAGCTCGCCTCTGCTCTTCCAGCAGCTCTGACACCTCTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
||
| CDS-3UTR CAA 90 bp | GCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGCTATCGGGTCTCCTCTCAGAGGCGAGCTCGCTaGGTTCTCCGGAGAGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ACCVLPCPHPTQSYRVSSQRRAR*VLRRGL Trigger: GAGCCCTCTCCGGAGAACCAAGCGAGCTCGCCTCTG...AGAGGAGACCCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
||
| CDS CCA 90 bp | CGGGGAGAGGTGTCCTGCTCAGAGCCTGGAGAAACTGTAGCATCCTaGCTTCGGGTCATCATCCGCCTAGGGGATTCAGGCACCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RGEVSCSEPGETVAS*LRVIIRLGDSGTRG Trigger: CCCTCTGGTGCCTGAATCCCCTAGGCGGATGATGACCCGAAGCCAGGATGCTACAGTTTCTCCAGGCTCTGAGCAGGACACCTCTCCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115184.2 |
||
| CDS-3UTR CAA 90 bp | CGGAACTGGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGCTATCGGTGGCAGCTGTGTCCTTaGGTTCTGTGCCTCCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RNWACCVLPCPHPTQSYRWQLCP*VLCLPL Trigger: AAGAGGGAGGCACAGAACCAAAGGACACAGCTGCCA...CCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCCAGTTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CAA 90 bp | GTTCTAACCCTGCAGTCCCCTGACGGAACTGGGCCTGCTGTGTCTTACCCTGTCTGGCAGCTGTGTCCTTaGGTTCTGTGCCTCCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VLTLQSPDGTGPAVSYPVWQLCP*VLCLPL Trigger: AAGAGGGAGGCACAGAACCAAAGGACACAGCTGCCA...GACAGGGTAAGACACAGCAGGCCCAGTTCCGTCAGGGGACTGCAGGGTTAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
||
| CDS-3UTR CAA 90 bp | GGAACTGGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGCTATCGGGCCTCAGAGAAGGAAGTaGGAGGTCCAAATGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GTGPAVSYPVHTPHRAIGPQRRK*EVQMAK Trigger: CTTTGCCATTTGGACCTCCAACTTCCTTCTCTGAGG...CCCGATAGCTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCCAGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CAA 90 bp | CCTGACGGAACTGGGCCTGCTGTGTCTTACCCTGTCCACACCCCACACAGAGCTCCTCAGAGAAGGAAGTaGGAGGTCCAAATGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PDGTGPAVSYPVHTPHRAPQRRK*EVQMAK Trigger: CTTTGCCATTTGGACCTCCAACTTCCTTCTCTGAGG...AGCTCTGTGTGGGGTGTGGACAGGGTAAGACACAGCAGGCCCAGTTCCGTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS CCA 90 bp | GTGGGCCAACAGGATGGTCAACACTGCCTTCCAACCTGGCTCTGCTaGGGTACAGGCATCCACTTCTGTTTCCCCATTCTCCTTGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VGQQDGQHCLPTWLC*GTGIHFCFPILLGF Trigger: GAAACCAAGGAGAATGGGGAAACAGAAGTGGATGCCTGTACCCCAGCAGAGCCAGGTTGGAAGGCAGTGTTGACCATCCTGTTGGCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS CCA 90 bp | AGAACGCTTGTGGGCCAACAGGATGGTCAACACTGCCTTCCAACCTaGCTCTGCTGGGGTACAGGCATCCACTTCTGTTTCCCCATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RTLVGQQDGQHCLPT*LCWGTGIHFCFPIL Trigger: GAGAATGGGGAAACAGAAGTGGATGCCTGTACCCCAGCAGAGCCAGGTTGGAAGGCAGTGTTGACCATCCTGTTGGCCCACAAGCGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS CCA 90 bp | GAGAGACTCATGGAGTCTGTCTCAGCTGGCTGGTTAGAACGCTTGTaGGCCAACAGGATGGTCAACACTGCCTTCCAACCTGGCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ERLMESVSAGWLERL*ANRMVNTAFQPGSA Trigger: AGCAGAGCCAGGTTGGAAGGCAGTGTTGACCATCCTGTTGGCCCACAAGCGTTCTAACCAGCCAGCTGAGACAGACTCCATGAGTCTCTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS CCA 90 bp | CACTTCAGCATGGAGTCTGTCTCAGCTGGCTGGTTAGAACGCTTGTaGGCCAACAGGATGGTCAACACTGCCTTCCAACCTGGCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HFSMESVSAGWLERL*ANRMVNTAFQPGSA Trigger: AGCAGAGCCAGGTTGGAAGGCAGTGTTGACCATCCTGTTGGCCCACAAGCGTTCTAACCAGCCAGCTGAGACAGACTCCATGCTGAAGTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102992.10 |
||
| CDS-3UTR CAA 90 bp | CACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCCTGCACAAGGATTTCTaGAGCTCAGCACATCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HPTQSYRVSSSSSHAGLRLHKDF*SSAHRS Trigger: GGAGCGATGTGCTGAGCTCAAGAAATCCTTGTGCAG...GCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CAA 90 bp | CAGCTGACCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCAGTTCTGTCCGCAGAGGCGAGCTCGCTaGGTTCTCCGGAGAGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QLTKGTQTCLSKSPQFCPQRRAR*VLRRGL Trigger: GAGCCCTCTCCGGAGAACCAAGCGAGCTCGCCTCTG...CGGACAGAACTGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGTCAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
||
| CDS-3UTR CAA 90 bp | AGAACAGCAGCAGCAGCTGACCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCCAGAGGCGAGCTCGCTaGGTTCTCCGGAGAGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RTAAAADQRNSDLFIKVPQRRAR*VLRRGL Trigger: GAGCCCTCTCCGGAGAACCAAGCGAGCTCGCCTCTG...GGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGTCAGCTGCTGCTGCTGTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
||
| CDS-3UTR CAA 90 bp | CACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCCCTCAGAGAAGGAAGTaGGAGGTCCAAATGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HPTQSYRVSSSSSHAGLRPQRRK*EVQMAK Trigger: CTTTGCCATTTGGACCTCCAACTTCCTTCTCTGAGG...GCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS CCA 90 bp | CCCTCTTCCGGGACAATTCCTTCATCTATCAGCTCCCGAACTTTCTaGGGTGTCCCTTCAGGGGAACGAACGACTGAACCCCAAGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PSSGTIPSSISSRTF*GVPSGERTTEPQVF Trigger: AAAGACTTGGGGTTCAGTCGTTCGTTCCCCTGAAGGGACACCCCAGAAAGTTCGGGAGCTGATAGATGAAGGAATTGTCCCGGAAGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000136255.2 ENSMUST00000147990.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CAA 90 bp | GCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGTGCAGTGAAATGGCAGCTGTGTCCTTaGGTTCTGTGCCTCCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AIGSPLHHHMQAFACAVKWQLCP*VLCLPL Trigger: AAGAGGGAGGCACAGAACCAAAGGACACAGCTGCCA...TTTCACTGCACATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CAA 90 bp | CACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGTGCTGCACAAGGATTTCTaGAGCTCAGCACATCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HTELSGLLFIITCRPSHVLHKDF*SSAHRS Trigger: GGAGCGATGTGCTGAGCTCAAGAAATCCTTGTGCAG...CACATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CAA 90 bp | CACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCCCTCAGAGAAGGAAGTaGGAGGTCCAAATGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HTPHRAIGSPLHHHMQAFPQRRK*EVQMAK Trigger: CTTTGCCATTTGGACCTCCAACTTCCTTCTCTGAGG...GAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS TCA 90 bp | TCTTTGACGAGTGTGATATTCACCCACGGGCACCAATCTCTATGCTaGGAGGTGGGATCAAAGAAGCTTCGGGGAGAGGTGTCAGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLTSVIFTHGHQSLC*EVGSKKLRGEVSEL Trigger: CAGCTCTGACACCTCTCCCCGAAGCTTCTTTGATCCCACCTCTCAGCATAGAGATTGGTGCCCGTGGGTGAATATCACACTCGTCAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
||
| CDS TCA 90 bp | TCTTTGACGAGTGTGATATTCACCCACGGGCACCAATCTCTATGCTaGGAGGTGGGATCAAAGAAGCTTCGGGGAGAGGTGTCCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLTSVIFTHGHQSLC*EVGSKKLRGEVSCS Trigger: TGAGCAGGACACCTCTCCCCGAAGCTTCTTTGATCCCACCTCTCAGCATAGAGATTGGTGCCCGTGGGTGAATATCACACTCGTCAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115184.2 |
||
| CDS GCA 90 bp | ATCCATCAACTGACTGGAATGTGGCAGCTGTGTCCTTTGGTTCTGTaGCTCCCTCTTCCGGGACAATTCCTTCATCTATCAGCTCCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: IHQLTGMWQLCPLVL*LPLPGQFLHLSAPE Trigger: TTCGGGAGCTGATAGATGAAGGAATTGTCCCGGAAGAGGGAGGCACAGAACCAAAGGACACAGCTGCCACATTCCAGTCAGTTGATGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CAA 90 bp | GACCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCAGTTCTGTCCGGAGCATGGCAGCTGTGTCCTTaGGTTCTGTGCCTCCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: DQRNSDLFIKVPSVLSGAWQLCP*VLCLPL Trigger: AAGAGGGAGGCACAGAACCAAAGGACACAGCTGCCA...TGCTCCGGACAGAACTGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS CCA 90 bp | TTCCTTGATTTTTCAGAGAGACTCATGGAGTCTGTCTCAGCTGGCTaGTTAGAACGCTTGTGGGCCAACAGGATGGTCAACACTGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLDFSERLMESVSAG*LERLWANRMVNTAF Trigger: GAAGGCAGTGTTGACCATCCTGTTGGCCCACAAGCGTTCTAACCAGCCAGCTGAGACAGACTCCATGAGTCTCTCTGAAAAATCAAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CAA 90 bp | CAGCAGCAGCAGCTGACCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCAGTGGCAGCTGGAGCACTaGAGCATGTCACATTCAACT | + |
|
Preference number: 5 (lower is better) Translates to: QQQQLTKGTQTCLSKSPQWQLEH*SMSHST Trigger: AGTTGAATGTGACATGCTCAAGTGCTCCAGCTGCCA...CTGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGGTCAGCTGCTGCTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CAA 90 bp | CCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGTTCTCCTTGGTTTCTTaGACGAGTGTGATATTCACC | + |
|
Preference number: 5 (lower is better) Translates to: PTQSYRVSSSSSHAGLRMFSLVS*TSVIFT Trigger: GGTGAATATCACACTCGTCAAAGAAACCAAGGAGAA...CATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CAA 90 bp | ACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGTGCTTCTCCTTGGTTTCTTaGACGAGTGTGATATTCACC | + |
|
Preference number: 5 (lower is better) Translates to: TQSYRVSSSSSHAGLRMCFSLVS*TSVIFT Trigger: GGTGAATATCACACTCGTCAAAGAAACCAAGGAGAA...GCACATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CAA 90 bp | ACACCCCACACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGTTCGGAACACTTTCCTaGATTTTTCAGAGAGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: TPHTELSGLLFIITCRPSFGTLS*IFQRDS Trigger: TGAGTCTCTCTGAAAAATCAAGGAAAGTGTTCCGAA...CGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGTGTGGGGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CAA 90 bp | GAGGATGAAGACTCCCACTGCCGGAATATTCGGAACACTTTCCTTGATTTTTCACTGCACAAGGATTTCTaGAGCTCAGCACATCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EDEDSHCRNIRNTFLDFSLHKDF*SSAHRS Trigger: GGAGCGATGTGCTGAGCTCAAGAAATCCTTGTGCAG...TGAAAAATCAAGGAAAGTGTTCCGAATATTCCGGCAGTGGGAGTCTTCATCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102992.10 |
||
| CDS-3UTR CAA 90 bp | ACAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGTGCAGTTCGGAACACTTTCCTaGATTTTTCAGAGAGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: TELSGLLFIITCRPSHVQFGTLS*IFQRDS Trigger: TGAGTCTCTCTGAAAAATCAAGGAAAGTGTTCCGAA...CTGCACATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CAA 90 bp | CAGAGCTATCGGGTCTCCTCTTCATCATCACATGCAGGCCTTCGCATGTGCAGTTTCGGAACACTTTCCTaGATTTTTCAGAGAGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: QSYRVSSSSSHAGLRMCSFGTLS*IFQRDS Trigger: TGAGTCTCTCTGAAAAATCAAGGAAAGTGTTCCGAA...ACTGCACATGCGAAGGCCTGCATGTGATGATGAAGAGGAGACCCGATAGCTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CAA 90 bp | AATGAAGAACAGCAGCAGCAGCTGACCAAAGGAACTCAGACTTGTTTATCAAAGCTGCACAAGGATTTCTaGAGCTCAGCACATCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NEEQQQQLTKGTQTCLSKLHKDF*SSAHRS Trigger: GGAGCGATGTGCTGAGCTCAAGAAATCCTTGTGCAG...CTTTGATAAACAAGTCTGAGTTCCTTTGGTCAGCTGCTGCTGCTGTTCTTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS-3UTR CAA 90 bp | CCAAAGGAACTCAGACTTGTTTATCAAAGTCCCCTCAGTTCTGTCCGGAGCATCTTCTCCTTGGTTTCTTaGACGAGTGTGATATTCACC | + |
|
Preference number: 5 (lower is better) Translates to: PKELRLVYQSPLSSVRSIFSLVS*TSVIFT Trigger: GGTGAATATCACACTCGTCAAAGAAACCAAGGAGAA...GATGCTCCGGACAGAACTGAGGGGACTTTGATAAACAAGTCTGAGTTCCTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS CAA 90 bp | CGGGGAGAGGTGTCAGAGCTGCTGGAAGAGCAGAGGCGAGCTCGCTaGGTTCTCCGGAGAGGGCTCGAGGGAACTTCCACGCCAGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RGEVSELLEEQRRAR*VLRRGLEGTSTPAE Trigger: TTCTGCTGGCGTGGAAGTTCCCTCGAGCCCTCTCCGGAGAACCAAGCGAGCTCGCCTCTGCTCTTCCAGCAGCTCTGACACCTCTCCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
||
| CDS CCA 72 bp | TGTCAGAGCTGCTGGAAGAGCAGAGGCGAGCTCGCTTaGTTCTCCGGAGAGGGCTCGAGGGAACTTCCACGC | + |
|
Preference number: 6 (lower is better) Translates to: CQSCWKSRGELA*FSGEGSRELPR Trigger: GCGTGGAAGTTCCCTCGAGCCCTCTCCGGAGAACCAAGCGAGCTCGCCTCTGCTCTTCCAGCAGCTCTGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
||
| CDS CAA 72 bp | GTGTCAGAGCTGCTGGAAGAGCAGAGGCGAGCTCGCTaGGTTCTCCGGAGAGGGCTCGAGGGAACTTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: VSELLEEQRRAR*VLRRGLEGTST Trigger: CGTGGAAGTTCCCTCGAGCCCTCTCCGGAGAACCAAGCGAGCTCGCCTCTGCTCTTCCAGCAGCTCTGACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
||
| CDS CCA 72 bp | GTGTCCTGCTCAGAGCCTGGAGAAACTGTAGCATCCTaGCTTCGGGTCATCATCCGCCTAGGGGATTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: VSCSEPGETVAS*LRVIIRLGDSG Trigger: GCCTGAATCCCCTAGGCGGATGATGACCCGAAGCCAGGATGCTACAGTTTCTCCAGGCTCTGAGCAGGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115184.2 |
||
| CDS CCA 72 bp | GTGGGCCAACAGGATGGTCAACACTGCCTTCCAACCTaGCTCTGCTGGGGTACAGGCATCCACTTCTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: VGQQDGQHCLPT*LCWGTGIHFCF Trigger: GAAACAGAAGTGGATGCCTGTACCCCAGCAGAGCCAGGTTGGAAGGCAGTGTTGACCATCCTGTTGGCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS CCA 72 bp | CAGGATGGTCAACACTGCCTTCCAACCTGGCTCTGCTaGGGTACAGGCATCCACTTCTGTTTCCCCATTCTC | + |
|
Preference number: 6 (lower is better) Translates to: QDGQHCLPTWLC*GTGIHFCFPIL Trigger: GAGAATGGGGAAACAGAAGTGGATGCCTGTACCCCAGCAGAGCCAGGTTGGAAGGCAGTGTTGACCATCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS CAA 90 bp | TCAGAGAGACTCATGGAGTCTGTCTCAGCTGGCTGGTTAGAACGCTaGTGGGCCAACAGGATGGTCAACACTGCCTTCCAACCTGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SERLMESVSAGWLER*WANRMVNTAFQPGS Trigger: AGAGCCAGGTTGGAAGGCAGTGTTGACCATCCTGTTGGCCCACAAGCGTTCTAACCAGCCAGCTGAGACAGACTCCATGAGTCTCTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000115184.2 ENSMUST00000152391.9 |
||
| CDS CCA 72 bp | GGGACAATTCCTTCATCTATCAGCTCCCGAACTTTCTaGGGTGTCCCTTCAGGGGAACGAACGACTGAACCC | + |
|
Preference number: 6 (lower is better) Translates to: GTIPSSISSRTF*GVPSGERTTEP Trigger: GGGTTCAGTCGTTCGTTCCCCTGAAGGGACACCCCAGAAAGTTCGGGAGCTGATAGATGAAGGAATTGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000136255.2 ENSMUST00000147990.2 ENSMUST00000152391.9 |
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| CDS CCA 72 bp | TATTCACCCACGGGCACCAATCTCTATGCTGAGAGGTaGGATCAAAGAAGCTTCGGGGAGAGGTGTCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: YSPTGTNLYAER*DQRSFGERCQS Trigger: GCTCTGACACCTCTCCCCGAAGCTTCTTTGATCCCACCTCTCAGCATAGAGATTGGTGCCCGTGGGTGAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000152391.9 |
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| CDS CCA 72 bp | ATGGAGTCTGTCTCAGCTGGCTGGTTAGAACGCTTGTaGGCCAACAGGATGGTCAACACTGCCTTCCAACCT | + |
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Preference number: 6 (lower is better) Translates to: MESVSAGWLERL*ANRMVNTAFQP Trigger: AGGTTGGAAGGCAGTGTTGACCATCCTGTTGGCCCACAAGCGTTCTAACCAGCCAGCTGAGACAGACTCCAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS CCA 72 bp | TATTCACCCACGGGCACCAATCTCTATGCTGAGAGGTaGGATCAAAGAAGCTTCGGGGAGAGGTGTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: YSPTGTNLYAER*DQRSFGERCPA Trigger: AGCAGGACACCTCTCCCCGAAGCTTCTTTGATCCCACCTCTCAGCATAGAGATTGGTGCCCGTGGGTGAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115184.2 |
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| CDS CAA 72 bp | CTCATGGAGTCTGTCTCAGCTGGCTGGTTAGAACGCTaGTGGGCCAACAGGATGGTCAACACTGCCTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LMESVSAGWLER*WANRMVNTAFQ Trigger: TTGGAAGGCAGTGTTGACCATCCTGTTGGCCCACAAGCGTTCTAACCAGCCAGCTGAGACAGACTCCATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS CAA 72 bp | AGCATGGAGTCTGTCTCAGCTGGCTGGTTAGAACGCTaGTGGGCCAACAGGATGGTCAACACTGCCTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: SMESVSAGWLER*WANRMVNTAFQ Trigger: TTGGAAGGCAGTGTTGACCATCCTGTTGGCCCACAAGCGTTCTAACCAGCCAGCTGAGACAGACTCCATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102992.10 |
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| CDS TCA 72 bp | AGTGTGATATTCACCCACGGGCACCAATCTCTATGCTaGGAGGTGGGATCAAAGAAGCTTCGGGGAGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: SVIFTHGHQSLC*EVGSKKLRGEV Trigger: CACCTCTCCCCGAAGCTTCTTTGATCCCACCTCTCAGCATAGAGATTGGTGCCCGTGGGTGAATATCACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS CCA 72 bp | GTTCTGCTTGAGGCGATCCATCAACTGACTGGAATGTaGCAGCTGTGTCCTTTGGTTCTGTGCCTCCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: VLLEAIHQLTGM*QLCPLVLCLPL Trigger: AAGAGGGAGGCACAGAACCAAAGGACACAGCTGCCACATTCCAGTCAGTTGATGGATCGCCTCAAGCAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS CAA 90 bp | GGCTCTGCTGGGGTACAGGCATCCACTTCTGTTTCCCCATTCTCCTaGGTTTCTTTGACGAGTGTGATATTCACCCACGGGCACCAATCT | + |
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Preference number: 6 (lower is better) Translates to: GSAGVQASTSVSPFS*VSLTSVIFTHGHQS Trigger: AGATTGGTGCCCGTGGGTGAATATCACACTCGTCAAAGAAACCAAGGAGAATGGGGAAACAGAAGTGGATGCCTGTACCCCAGCAGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS TCA 72 bp | CAATGGAGACTGTTCTGCTTGAGGCGATCCATCAACTaGCTGGAATGTGGCAGCTGTGTCCTTTGGTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: QWRLFCLRRSIN*LECGSCVLWFC Trigger: ACAGAACCAAAGGACACAGCTGCCACATTCCAGTCAGTTGATGGATCGCCTCAAGCAGAACAGTCTCCATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS CAA 72 bp | GCATCCACTTCTGTTTCCCCATTCTCCTTGGTTTCTTaGACGAGTGTGATATTCACCCACGGGCACCAATCT | + |
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Preference number: 6 (lower is better) Translates to: ASTSVSPFSLVS*TSVIFTHGHQS Trigger: AGATTGGTGCCCGTGGGTGAATATCACACTCGTCAAAGAAACCAAGGAGAATGGGGAAACAGAAGTGGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080812.14 ENSMUST00000102992.10 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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| CDS CAA 90 bp | ATGAGGATGAAGACTCCCACTGCCGGAATATTCGGAACACTTTCCTaGATTTTTCAGAGAGACTCATGGAGTCTGTCTCAGCTGGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: MRMKTPTAGIFGTLS*IFQRDSWSLSQLAG Trigger: ACCAGCCAGCTGAGACAGACTCCATGAGTCTCTCTGAAAAATCAAGGAAAGTGTTCCGAATATTCCGGCAGTGGGAGTCTTCATCCTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080812.14 ENSMUST00000115184.2 ENSMUST00000152391.9 |
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