Pregenerated sensors for ZC3HAV1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047749Ensembl transcript IDs: ENSMUST00000058524.3
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAGGAGAGGAGGGGAGAGGGAGGAGGGAGGGAGAGACCACGAAATaGGCAAGGTATATATGGATTCCTGATGGTCTGTCCCATCCACAC | + |
|
Preference number: 1 (lower is better) Translates to: EGEEGRGRREGETTK*ARYIWIPDGLSHPH Trigger: GTGTGGATGGGACAGACCATCAGGAATCCATATATACCTTGCCCATTTCGTGGTCTCTCCCTCCCTCCTCCCTCTCCCCTCCTCTCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 90 bp | ACCTTTAATCCCAGCACTCAGGTAGAGTGTGGGGCACAAAGGCAATaGCAGAGACAGGTAGGCTTCTGTGAGTTCAAGGCCAGCCTGGTC | + |
|
Preference number: 1 (lower is better) Translates to: TFNPSTQVECGAQRQ*QRQVGFCEFKASLV Trigger: GACCAGGCTGGCCTTGAACTCACAGAAGCCTACCTGTCTCTGTCATTGCCTTTGTGCCCCACACTCTACCTGAGTGCTGGGATTAAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CCA 90 bp | GCATTCAGGGGCTGCAGAGAGAGACTACAGCTTCAGGATTCACCCTaGATTACGTGCTCAGAATTTACCCTCTCTTGGCTGGCTCCAGGT | + |
|
Preference number: 1 (lower is better) Translates to: AFRGCRERLQLQDSP*ITCSEFTLSWLAPG Trigger: ACCTGGAGCCAGCCAAGAGAGGGTAAATTCTGAGCACGTAATCCAGGGTGAATCCTGAAGCTGTAGTCTCTCTCTGCAGCCCCTGAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CCA 90 bp | AGAGGGAGGAGGGAGGGAGAGACCACGAAATGGGCAAGGTATATATaGATTCCTGATGGTCTGTCCCATCCACACCGGGGAGATATAACT | + |
|
Preference number: 1 (lower is better) Translates to: RGRREGETTKWARYI*IPDGLSHPHRGDIT Trigger: AGTTATATCTCCCCGGTGTGGATGGGACAGACCATCAGGAATCCATATATACCTTGCCCATTTCGTGGTCTCTCCCTCCCTCCTCCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR GCA 90 bp | TTTCTGAGACATGAAGAAATGAAAACACAAGACAAAGCAAAGAGCTaGGCATTCTCTGGCCCACGCACCGCGAGAGAGTGCCCAAGGTCA | + |
|
Preference number: 1 (lower is better) Translates to: FLRHEEMKTQDKAKS*AFSGPRTARECPRS Trigger: TGACCTTGGGCACTCTCTCGCGGTGCGTGGGCCAGAGAATGCGCAGCTCTTTGCTTTGTCTTGTGTTTTCATTTCTTCATGTCTCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 90 bp | TGTGCACCAGGGCAGTGTCTGAAGGTGGAGAGAGGTAAGGAAAACTaGCCCTTTAGAAGGTTTCTGAGGGGGAAAGAACTTCCAACACTT | + |
|
Preference number: 1 (lower is better) Translates to: CAPGQCLKVERGKEN*PFRRFLRGKELPTL Trigger: AAGTGTTGGAAGTTCTTTCCCCCTCAGAAACCTTCTAAAGGGTCAGTTTTCCTTACCTCTCTCCACCTTCAGACACTGCCCTGGTGCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CCA 90 bp | GGCCAGCCTCTAACTCACTGTGTTATGAAGACTGGCCTTCAACTCTaGCTCCTTCTGCCTCCAGCTTTTAAGTGCTGGAATTATAGGCAT | + |
|
Preference number: 1 (lower is better) Translates to: GQPLTHCVMKTGLQL*LLLPPAFKCWNYRH Trigger: ATGCCTATAATTCCAGCACTTAAAAGCTGGAGGCAGAAGGAGCCAGAGTTGAAGGCCAGTCTTCATAACACAGTGAGTTAGAGGCTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 90 bp | TACATTGGGGAACATGACCACAACAAATATCAGCAAAGCACACACTaGAAACAACAGGATGAGTGGGTACAGAGAGGCTGGAGGAAGGGA | + |
|
Preference number: 1 (lower is better) Translates to: YIGEHDHNKYQQSTH*KQQDEWVQRGWRKG Trigger: TCCCTTCCTCCAGCCTCTCTGTACCCACTCATCCTGTTGTTTTCAGTGTGTGCTTTGCTGATATTTGTTGTGGTCATGTTCCCCAATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 90 bp | CTTGCTGGTGGAGGACTTTGTTTCACATGGGCAAGGCCCTTGGTTTaGTCCCAATGCATAAACACACACACAAACACACACACAAACACA | + |
|
Preference number: 1 (lower is better) Translates to: LAGGGLCFTWARPLV*SQCINTHTNTHTNT Trigger: TGTGTTTGTGTGTGTGTTTGTGTGTGTGTTTATGCATTGGGATCAAACCAAGGGCCTTGCCCATGTGAAACAAAGTCCTCCACCAGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 90 bp | ACCACTGTAAGAGCTACCACGTCTATTGATGGAAAGAGAACACACTaGGCCACCCCATCCCATCAAGGATTTAAGATGGCTTACAGCAAA | + |
|
Preference number: 1 (lower is better) Translates to: TTVRATTSIDGKRTH*ATPSHQGFKMAYSK Trigger: TTTGCTGTAAGCCATCTTAAATCCTTGATGGGATGGGGTGGCTCAGTGTGTTCTCTTTCCATCAATAGACGTGGTAGCTCTTACAGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 90 bp | GAGCAGGCTCCAAACACCCCCATCCTTCCTTTCTACGAAGGTTTGTaGATAAAATCACCCTCTTCCCTCAGTACCACATCTCTTAACTTT | + |
|
Preference number: 1 (lower is better) Translates to: EQAPNTPILPFYEGL*IKSPSSLSTTSLNF Trigger: AAAGTTAAGAGATGTGGTACTGAGGGAAGAGGGTGATTTTATTCACAAACCTTCGTAGAAAGGAAGGATGGGGGTGTTTGGAGCCTGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 90 bp | AAGCAATACTATAAGAGCTACCACTGTAAGAGCTACCACGTCTATTaGTGGAAAGAGAACACACTGAGCCACCCCATCCCATCAAGGATT | + |
|
Preference number: 1 (lower is better) Translates to: KQYYKSYHCKSYHVY*WKENTLSHPIPSRI Trigger: AATCCTTGATGGGATGGGGTGGCTCAGTGTGTTCTCTTTCCATCAATAGACGTGGTAGCTCTTACAGTGGTAGCTCTTATAGTATTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 90 bp | GTAAGGGTTATTGTGACTCTTGACAATTGTAATTTTGCCAGGCTTTaGGGCACAGTGAGGGAAGTAGTGATTATGTTTACAGAAGAGGCA | + |
|
Preference number: 1 (lower is better) Translates to: VRVIVTLDNCNFARL*GTVREVVIMFTEEA Trigger: TGCCTCTTCTGTAAACATAATCACTACTTCCCTCACTGTGCCTCAAAGCCTGGCAAAATTACAATTGTCAAGAGTCACAATAACCCTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR GCA 90 bp | TGGACATCATTGAGTAATGTGCCTATGAAATACATAAGAGAAGTGTaGACAAAGGCAGTGACAGTTTTGTGTGTGTGTATACCAAGGCAG | + |
|
Preference number: 1 (lower is better) Translates to: WTSLSNVPMKYIREV*TKAVTVLCVCIPRQ Trigger: CTGCCTTGGTATACACACACACAAAACTGTCACTGCCTTTGTGCACACTTCTCTTATGTATTTCATAGGCACATTACTCAATGATGTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CAA 90 bp | GCTTCAGGATTCACCCTGGATTACGTGCTCAGAATTTACCCTCTCTaGGCTGGCTCCAGGTCCAACCTCAGCCCTCAGCCGCAAGTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: ASGFTLDYVLRIYPL*AGSRSNLSPQPQVY Trigger: ATACACTTGCGGCTGAGGGCTGAGGTTGGACCTGGAGCCAGCCAAGAGAGGGTAAATTCTGAGCACGTAATCCAGGGTGAATCCTGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR CCA 90 bp | TACAGCTCAGAGGTAGAGCACACTTGCCTAGTGCTCATGAGCCACAGGCCCATTAGGATGAGAGAGGGGTaGGGTGAGGTAGAAACCTCC | + |
|
Preference number: 2 (lower is better) Translates to: YSSEVEHTCLVLMSHRPIRMREG*GEVETS Trigger: GGAGGTTTCTACCTCACCCCACCCCTCTCTCATCCT...AATGGGCCTGTGGCTCATGAGCACTAGGCAAGTGTGCTCTACCTCTGAGCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR CCA 90 bp | GCAGATGCCTCCAGCCTACCTGGTCTACATAATGAGTTCCAGGCCAGTCAGGGCAAAAGATCAGGCAGCTaGAATGGAGGCAGGGAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: ADASSLPGLHNEFQASQGKRSGS*NGGREK Trigger: CTTCTCCCTGCCTCCATTCCAGCTGCCTGATCTTTT...GCCCTGACTGGCCTGGAACTCATTATGTAGACCAGGTAGGCTGGAGGCATCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CAA 90 bp | CCATTTACCTGTTGCTCTGCCCCTGTGCATCCTAACGTAGGATGCTaGCCCTGCGTGATGGAGGCCGATGAAAATTTCGGCAGGAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: PFTCCSAPVHPNVGC*PCVMEADENFGRRN Trigger: GTTTCTCCTGCCGAAATTTTCATCGGCCTCCATCACGCAGGGCAAGCATCCTACGTTAGGATGCACAGGGGCAGAGCAACAGGTAAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR TCA 90 bp | GTGCTCAGAATTTACCCTCTCTTGGCTGGCTCCAGGTCCAACCTCAGCCCTCAGCAAAAGTCTTGCTTCTaGTCCTCCAAGATGGACAGG | + |
|
Preference number: 2 (lower is better) Translates to: VLRIYPLLAGSRSNLSPQQKSCF*SSKMDR Trigger: CCTGTCCATCTTGGAGGATCAGAAGCAAGACTTTTG...CTGAGGGCTGAGGTTGGACCTGGAGCCAGCCAAGAGAGGGTAAATTCTGAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR GCA 90 bp | GCAGATGCCTCCAGCCTACCTGGTCTACATAATGAGTTCCAGGCCAGTCAGGGCAACTCTGGCTCCTTCTaGCTCCAGCTTTTAAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: ADASSLPGLHNEFQASQGNSGSF*LQLLSA Trigger: AGCACTTAAAAGCTGGAGGCAGAAGGAGCCAGAGTT...GCCCTGACTGGCCTGGAACTCATTATGTAGACCAGGTAGGCTGGAGGCATCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR TCA 90 bp | CTCCACCCCGGGAGTCATTTCCCTGTGTGCTGTGGAACTAATTTGAAAAGTAAAGAGAGAGGGGTGGGGTaGGGTAGAAACCTCCGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LHPGSHFPVCCGTNLKSKERGVG*GRNLRA Trigger: TGCTCGGAGGTTTCTACCTCACCCCACCCCTCTCTC...TTTACTTTTCAAATTAGTTCCACAGCACACAGGGAAATGACTCCCGGGGTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR TCA 90 bp | GCAGATGCCTCCAGCCTACCTGGTCTACATAATGAGTTCCAGGCCAGTCAGGGCTGTGCACAAAGGCAGTaGCAGTTTTGTGTGTGTGTA | + |
|
Preference number: 2 (lower is better) Translates to: ADASSLPGLHNEFQASQGCAQRQ*QFCVCV Trigger: TACACACACACAAAACTGTCACTGCCTTTGTGCACA...GCCCTGACTGGCCTGGAACTCATTATGTAGACCAGGTAGGCTGGAGGCATCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR GCA 90 bp | AGAAGGTTTCTGAGGGGGAAAGAACTTCCAACACTTGGAAACAGATTTGCCATGCGCACCGCGAGAGAGTaGCCAAGGTCAGCCATCACC | + |
|
Preference number: 2 (lower is better) Translates to: RRFLRGKELPTLGNRFAMRTARE*PRSAIT Trigger: GGTGATGGCTGACCTTGGGCACTCTCTCGCGGTGCG...CATGGCAAATCTGTTTCCAAGTGTTGGAAGTTCTTTCCCCCTCAGAAACCTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR CCA 90 bp | GCAGATGCCTCCAGCCTACCTGGTCTACATAATGAGTTCCAGGCCAGTCAGGGCGATGTACCTTGCTGGTaGAGGACTTTGTTTCACATG | + |
|
Preference number: 2 (lower is better) Translates to: ADASSLPGLHNEFQASQGDVPCW*RTLFHM Trigger: CATGTGAAACAAAGTCCTCCACCAGCAAGGTACATC...GCCCTGACTGGCCTGGAACTCATTATGTAGACCAGGTAGGCTGGAGGCATCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR CCA 90 bp | GCAGATGCCTCCAGCCTACCTGGTCTACATAATGAGTTCCAGGCCAGTCAGGGCAATCAGAGCCAGAAGTaGTGGCACACACCTTTAATC | + |
|
Preference number: 2 (lower is better) Translates to: ADASSLPGLHNEFQASQGNQSQK*WHTPLI Trigger: GATTAAAGGTGTGTGCCACCACTTCTGGCTCTGATT...GCCCTGACTGGCCTGGAACTCATTATGTAGACCAGGTAGGCTGGAGGCATCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR TCA 90 bp | ATGGAGGCCGATGAAAATTTCGGCAGGAGAAACAGAACTGCAATATCCTTAGGTAGGCTCGATAGAGGATaGGAGAGGGGTGGGGTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: MEADENFGRRNRTAISLGRLDRG*ERGGVR Trigger: CCTCACCCCACCCCTCTCTCATCCTCTATCGAGCCT...ACCTAAGGATATTGCAGTTCTGTTTCTCCTGCCGAAATTTTCATCGGCCTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR CCA 90 bp | GAGCACACTTGCCTAGTGCTCATGAGCCACAGGCCCATTCCCAGTATCATATACAAACAACAGGATGAGTaGGTACAGAGAGGCTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: EHTCLVLMSHRPIPSIIYKQQDE*VQRGWR Trigger: CCTCCAGCCTCTCTGTACCCACTCATCCTGTTGTTT...GTATATGATACTGGGAATGGGCCTGTGGCTCATGAGCACTAGGCAAGTGTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR GCA 90 bp | GCAGATGCCTCCAGCCTACCTGGTCTACATAATGAGTTCCAGGCCAGTCAGGGCCAGGAGAAACAGAACTaGAATATCCTTAGGTTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: ADASSLPGLHNEFQASQGQEKQN*NILRFA Trigger: AGCAAACCTAAGGATATTGCAGTTCTGTTTCTCCTG...GCCCTGACTGGCCTGGAACTCATTATGTAGACCAGGTAGGCTGGAGGCATCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CAA 90 bp | CCTATGAAATACATAAGAGAAGTGTGCACAAAGGCAGTGACAGTTTaGTGTGTGTGTATACCAAGGCAGGGAGAGGTGGGGGTGTGCACC | + |
|
Preference number: 2 (lower is better) Translates to: PMKYIREVCTKAVTV*CVCIPRQGEVGVCT Trigger: GGTGCACACCCCCACCTCTCCCTGCCTTGGTATACACACACACAAAACTGTCACTGCCTTTGTGCACACTTCTCTTATGTATTTCATAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR TCA 90 bp | GAGCACACTTGCCTAGTGCTCATGAGCCACAGGCCCATTCCCAGTATCATATACAGCTACCACGTCTATTaGTGGAAAGAGAACACACTG | + |
|
Preference number: 2 (lower is better) Translates to: EHTCLVLMSHRPIPSIIYSYHVY*WKENTL Trigger: CAGTGTGTTCTCTTTCCATCAATAGACGTGGTAGCT...GTATATGATACTGGGAATGGGCCTGTGGCTCATGAGCACTAGGCAAGTGTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR TCA 90 bp | ACCTCCCACATATGGAAGGCGAGAACTGACAACAGGGAGGCGACCTCTGACCTCAGATTTGCCATGGAATaGGGAAAAGATAATAAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: TSHIWKARTDNREATSDLRFAME*GKDNKD Trigger: GTCCTTATTATCTTTTCCTCATTCCATGGCAAATCT...GAGGTCAGAGGTCGCCTCCCTGTTGTCAGTTCTCGCCTTCCATATGTGGGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR GCA 90 bp | TACAGCTCAGAGGTAGAGCACACTTGCCTAGTGCTCATGAGCCACAGGCCCATTGCCCAAGCCACAAAATaGAACATGGGAAATTCACAA | + |
|
Preference number: 2 (lower is better) Translates to: YSSEVEHTCLVLMSHRPIAQATK*NMGNSQ Trigger: TTGTGAATTTCCCATGTTGCATTTTGTGGCTTGGGC...AATGGGCCTGTGGCTCATGAGCACTAGGCAAGTGTGCTCTACCTCTGAGCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR GCA 90 bp | CTCCACCCCGGGAGTCATTTCCCTGTGTGCTGTGGAACTAATTTGAAAAGTAAACTGGGATTAAAGGCCTaGACCACTGGGACTGGACTA | + |
|
Preference number: 2 (lower is better) Translates to: LHPGSHFPVCCGTNLKSKLGLKA*TTGTGL Trigger: TAGTCCAGTCCCAGTGGTGCAGGCCTTTAATCCCAG...TTTACTTTTCAAATTAGTTCCACAGCACACAGGGAAATGACTCCCGGGGTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR GCA 90 bp | CATAACACATCACTTTGTAGCTATGATTTTCTATTCAGACAGACAGGCCATCTCCTAGGCCTGAGGATGTaGCTCGGGAGGCAGAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: HNTSLCSYDFLFRQTGHLLGLRM*LGRQSA Trigger: AGCACTCTGCCTCCCGAGGCACATCCTCAGGCCTAG...GAGATGGCCTGTCTGTCTGAATAGAAAATCATAGCTACAAAGTGATGTGTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CAA 90 bp | CCTCTCCACCCCGGGAGTCATTTCCCTGTGTGCTGTGGAACTAATTaGAAAAGTAAAGTCCAAGGAAACACTGCTCTGTTTCTGAGACAT | + |
|
Preference number: 2 (lower is better) Translates to: PLHPGSHFPVCCGTN*KSKVQGNTALFLRH Trigger: ATGTCTCAGAAACAGAGCAGTGTTTCCTTGGACTTTACTTTTCAAATTAGTTCCACAGCACACAGGGAAATGACTCCCGGGGTGGAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR TCA 90 bp | CTCCACCCCGGGAGTCATTTCCCTGTGTGCTGTGGAACTAATTTGAAAAGTAAATACATCAGGCAGTCTTaGACTCACAGATCTGCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: LHPGSHFPVCCGTNLKSKYIRQS*THRSAC Trigger: GCAAGCAGATCTGTGAGTTCAAGACTGCCTGATGTA...TTTACTTTTCAAATTAGTTCCACAGCACACAGGGAAATGACTCCCGGGGTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR GCA 90 bp | ATGGAGGCCGATGAAAATTTCGGCAGGAGAAACAGAACTGCAATATCCTTAGGTAAGGCATTCAGGGGCTaGAGAGAGAGACTACAGCTT | + |
|
Preference number: 2 (lower is better) Translates to: MEADENFGRRNRTAISLGKAFRG*RERLQL Trigger: AAGCTGTAGTCTCTCTCTGCAGCCCCTGAATGCCTT...ACCTAAGGATATTGCAGTTCTGTTTCTCCTGCCGAAATTTTCATCGGCCTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CAA 90 bp | GATGAAAATTTCGGCAGGAGAAACAGAACTGCAATATCCTTAGGTTaGCTTCCAAAAGATCAGGCAGCTGGAATGGAGGCAGGGAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: DENFGRRNRTAISLG*LPKDQAAGMEAGRR Trigger: TCTTCTCCCTGCCTCCATTCCAGCTGCCTGATCTTTTGGAAGCAAACCTAAGGATATTGCAGTTCTGTTTCTCCTGCCGAAATTTTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR TCA 90 bp | CTCCACCCCGGGAGTCATTTCCCTGTGTGCTGTGGAACTAATTTGAAAAGTAAAGTATATATGGATTCCTaGTGGTCTGTCCCATCCACA | + |
|
Preference number: 2 (lower is better) Translates to: LHPGSHFPVCCGTNLKSKVYMDS*WSVPST Trigger: TGTGGATGGGACAGACCATCAGGAATCCATATATAC...TTTACTTTTCAAATTAGTTCCACAGCACACAGGGAAATGACTCCCGGGGTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR TCA 90 bp | AGAAGGTTTCTGAGGGGGAAAGAACTTCCAACACTTGGAAACAGATTTGCCATGGCAAGGCCCTTGGTTTaGTCCCAATGCATAAACACA | + |
|
Preference number: 2 (lower is better) Translates to: RRFLRGKELPTLGNRFAMARPLV*SQCINT Trigger: TGTGTTTATGCATTGGGATCAAACCAAGGGCCTTGC...CATGGCAAATCTGTTTCCAAGTGTTGGAAGTTCTTTCCCCCTCAGAAACCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR CCA 90 bp | AGGGTTGTGGTGATCATGAGTGTGGTGGTGAACATGAACACCTATAGACCTAGCTTAGATGTACCTTGCTaGTGGAGGACTTTGTTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: RVVVIMSVVVNMNTYRPSLDVPC*WRTLFH Trigger: GTGAAACAAAGTCCTCCACCAGCAAGGTACATCTAA...GCTAGGTCTATAGGTGTTCATGTTCACCACCACACTCATGATCACCACAACCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR TCA 90 bp | AGAAGGTTTCTGAGGGGGAAAGAACTTCCAACACTTGGAAACAGATTTGCCATGAAATGCAATTTCTTTTaGGGCAGGGTCTCACTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: RRFLRGKELPTLGNRFAMKCNFF*GRVSLC Trigger: GCACAGTGAGACCCTGCCTCAAAAGAAATTGCATTT...CATGGCAAATCTGTTTCCAAGTGTTGGAAGTTCTTTCCCCCTCAGAAACCTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR GCA 90 bp | TGGACATCATTGAGTAATGTGCCTATGAAATACATAAGAGAAGTGTGCACAAAGGACAAAGCAAAGAGCTaGGCATTCTCTGGCCCACGC | + |
|
Preference number: 2 (lower is better) Translates to: WTSLSNVPMKYIREVCTKDKAKS*AFSGPR Trigger: GCGTGGGCCAGAGAATGCGCAGCTCTTTGCTTTGTC...CTTTGTGCACACTTCTCTTATGTATTTCATAGGCACATTACTCAATGATGTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR CCA 90 bp | TGGACATCATTGAGTAATGTGCCTATGAAATACATAAGAGAAGTGTGCACAAAGTTACCCTCTCTTGGCTaGCTCCAGGTCCAACCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: WTSLSNVPMKYIREVCTKLPSLG*LQVQPQ Trigger: CTGAGGTTGGACCTGGAGCCAGCCAAGAGAGGGTAA...CTTTGTGCACACTTCTCTTATGTATTTCATAGGCACATTACTCAATGATGTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR TCA 90 bp | TGGACATCATTGAGTAATGTGCCTATGAAATACATAAGAGAAGTGTGCACAAAGGGAAAGAGAACACACTaGGCCACCCCATCCCATCAA | + |
|
Preference number: 2 (lower is better) Translates to: WTSLSNVPMKYIREVCTKGKRTH*ATPSHQ Trigger: TTGATGGGATGGGGTGGCTCAGTGTGTTCTCTTTCC...CTTTGTGCACACTTCTCTTATGTATTTCATAGGCACATTACTCAATGATGTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR TCA 90 bp | ATGGAGGCCGATGAAAATTTCGGCAGGAGAAACAGAACTGCAATATCCTTAGGTAGAGGTAAGGAAAACTaGCCCTTTAGAAGGTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: MEADENFGRRNRTAISLGRGKEN*PFRRFL Trigger: CAGAAACCTTCTAAAGGGTCAGTTTTCCTTACCTCT...ACCTAAGGATATTGCAGTTCTGTTTCTCCTGCCGAAATTTTCATCGGCCTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR CCA 90 bp | AGGGTTGTGGTGATCATGAGTGTGGTGGTGAACATGAACACCTATAGACCTAGCCATAAGCTATGTAAATaGAGTCTAGAAAACACCAGC | + |
|
Preference number: 2 (lower is better) Translates to: RVVVIMSVVVNMNTYRPSHKLCK*SLENTS Trigger: GCTGGTGTTTTCTAGACTCCATTTACATAGCTTATG...GCTAGGTCTATAGGTGTTCATGTTCACCACCACACTCATGATCACCACAACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR TCA 90 bp | ATGGAGGCCGATGAAAATTTCGGCAGGAGAAACAGAACTGCAATATCCTTAGGTTTCTACGAAGGTTTGTaGATAAAATCACCCTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: MEADENFGRRNRTAISLGFYEGL*IKSPSS Trigger: GGAAGAGGGTGATTTTATTCACAAACCTTCGTAGAA...ACCTAAGGATATTGCAGTTCTGTTTCTCCTGCCGAAATTTTCATCGGCCTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR GCA 90 bp | ATGGAGGCCGATGAAAATTTCGGCAGGAGAAACAGAACTGCAATATCCTTAGGTTACATAAGAGAAGTGTaGACAAAGGCAGTGACAGTT | + |
|
Preference number: 2 (lower is better) Translates to: MEADENFGRRNRTAISLGYIREV*TKAVTV Trigger: AACTGTCACTGCCTTTGTGCACACTTCTCTTATGTA...ACCTAAGGATATTGCAGTTCTGTTTCTCCTGCCGAAATTTTCATCGGCCTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR TCA 90 bp | TGGACATCATTGAGTAATGTGCCTATGAAATACATAAGAGAAGTGTGCACAAAGCAGCAAAGCACACACTaGAAACAACAGGATGAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: WTSLSNVPMKYIREVCTKQQSTH*KQQDEW Trigger: CCACTCATCCTGTTGTTTTCAGTGTGTGCTTTGCTG...CTTTGTGCACACTTCTCTTATGTATTTCATAGGCACATTACTCAATGATGTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR CCA 90 bp | TGGACATCATTGAGTAATGTGCCTATGAAATACATAAGAGAAGTGTGCACAAAGTGGGCAAGGTATATATaGATTCCTGATGGTCTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: WTSLSNVPMKYIREVCTKWARYI*IPDGLS Trigger: GGACAGACCATCAGGAATCCATATATACCTTGCCCA...CTTTGTGCACACTTCTCTTATGTATTTCATAGGCACATTACTCAATGATGTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR GCA 90 bp | CATAACACATCACTTTGTAGCTATGATTTTCTATTCAGACAGACAGGCCATCTCACTTGGAAACAGATTTaGCATGGAATGAGGAAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: HNTSLCSYDFLFRQTGHLTWKQI*HGMRKR Trigger: TCTTTTCCTCATTCCATGGCAAATCTGTTTCCAAGT...GAGATGGCCTGTCTGTCTGAATAGAAAATCATAGCTACAAAGTGATGTGTTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR CCA 90 bp | TGGACATCATTGAGTAATGTGCCTATGAAATACATAAGAGAAGTGTGCACAAAGAAGAGGAAACTGGTTTaGAAAGGACACTTTTACATC | + |
|
Preference number: 2 (lower is better) Translates to: WTSLSNVPMKYIREVCTKKRKLV*KGHFYI Trigger: GATGTAAAAGTGTCCTTTCCAAACCAGTTTCCTCTT...CTTTGTGCACACTTCTCTTATGTATTTCATAGGCACATTACTCAATGATGTCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CCA 72 bp | TCACCCTGGATTACGTGCTCAGAATTTACCCTCTCTTaGCTGGCTCCAGGTCCAACCTCAGCCCTCAGCCGC | + |
|
Preference number: 3 (lower is better) Translates to: SPWITCSEFTLS*LAPGPTSALSR Trigger: GCGGCTGAGGGCTGAGGTTGGACCTGGAGCCAGCCAAGAGAGGGTAAATTCTGAGCACGTAATCCAGGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR CAA 90 bp | ACCTCCCACATATGGAAGGCGAGAACTGACAACAGGGAGGCGACCTCTGACCTCGAAACCTGCCCTCCATaGAGGCTCGAAGGCATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: TSHIWKARTDNREATSDLETCPP*RLEGIQ Trigger: CTGAATGCCTTCGAGCCTCAATGGAGGGCAGGTTTC...GAGGTCAGAGGTCGCCTCCCTGTTGTCAGTTCTCGCCTTCCATATGTGGGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 72 bp | AGTGCCCAAGGTCAGCCATCACCCACTAGTGTAAACTaGCCCCAAGTTAGCTCCCCAGCGAGCAGGCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SAQGQPSPTSVN*PQVSSPASRLQ Trigger: TTGGAGCCTGCTCGCTGGGGAGCTAACTTGGGGTCAGTTTACACTAGTGGGTGATGGCTGACCTTGGGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CCA 72 bp | CCTGGATTACGTGCTCAGAATTTACCCTCTCTTGGCTaGCTCCAGGTCCAACCTCAGCCCTCAGCCGCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: PGLRAQNLPSLG*LQVQPQPSAAS Trigger: ACTTGCGGCTGAGGGCTGAGGTTGGACCTGGAGCCAGCCAAGAGAGGGTAAATTCTGAGCACGTAATCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CCA 72 bp | GAAAACACAAGACAAAGCAAAGAGCTGCGCATTCTCTaGCCCACGCACCGCGAGAGAGTGCCCAAGGTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: ENTRQSKELRIL*PTHRERVPKVS Trigger: GCTGACCTTGGGCACTCTCTCGCGGTGCGTGGGCCAGAGAATGCGCAGCTCTTTGCTTTGTCTTGTGTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 72 bp | CCCAGCACTCAGGTAGAGTGTGGGGCACAAAGGCAATaGCAGAGACAGGTAGGCTTCTGTGAGTTCAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: PSTQVECGAQRQ*QRQVGFCEFKA Trigger: GGCCTTGAACTCACAGAAGCCTACCTGTCTCTGTCATTGCCTTTGTGCCCCACACTCTACCTGAGTGCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 72 bp | CTGATAGGCTCGATAGAGGATGAGAGAGGGGTGGGGTaGGGTAGAAACCTCCGAGCAGAGTCCAGAGATCAT | + |
|
Preference number: 3 (lower is better) Translates to: LIGSIEDERGVG*GRNLRAESRDH Trigger: ATGATCTCTGGACTCTGCTCGGAGGTTTCTACCTCACCCCACCCCTCTCTCATCCTCTATCGAGCCTATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 72 bp | AGATCTGGGTCCATATCCCCGGATAGAAACCCAAAGTaGGGAACCACCACTGTTGGGACAGCTTGCCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: RSGSISPDRNPK*GTTTVGTACHS Trigger: GCTGTGGCAAGCTGTCCCAACAGTGGTGGTTCCTCACTTTGGGTTTCTATCCGGGGATATGGACCCAGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR GCA 72 bp | CCCTCTTCCCTCAGTACCACATCTCTTAACTTTATCTaGCCAGCATGGGGTGAGCAGCCAGACTCGATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PSSLSTTSLNFI*PAWGEQPDSIW Trigger: CCAGATCGAGTCTGGCTGCTCACCCCATGCTGGGCAGATAAAGTTAAGAGATGTGGTACTGAGGGAAGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR GCA 72 bp | TGCCACAGCCCTTCTTCCTTACCCCCATTTACCTGTTaGTCTGCCCCTGTGCATCCTAACGTAGGATGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: CHSPSSLPPFTC*SAPVHPNVGCL Trigger: CAAGCATCCTACGTTAGGATGCACAGGGGCAGAGCAACAGGTAAATGGGGGTAAGGAAGAAGGGCTGTGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR GCA 72 bp | CTAGGCCTGAGGATGTGCCTCGGGAGGCAGAGTGCTTaGTTACATGATCAAGTCCCATCTTCAATCCCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: LGLRMCLGRQSA*LHDQVPSSIPS Trigger: GCTAGGGATTGAAGATGGGACTTGATCATGTAAGCAAGCACTCTGCCTCCCGAGGCACATCCTCAGGCCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CCA 72 bp | AGGGAGGGAGAGACCACGAAATGGGCAAGGTATATATaGATTCCTGATGGTCTGTCCCATCCACACCGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: REGETTKWARYI*IPDGLSHPHRG Trigger: TCCCCGGTGTGGATGGGACAGACCATCAGGAATCCATATATACCTTGCCCATTTCGTGGTCTCTCCCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CCA 72 bp | GCTGGGCCAGCCTCTAACTCACTGTGTTATGAAGACTaGCCTTCAACTCTGGCTCCTTCTGCCTCCAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: AGPASNSLCYED*PSTLAPSASSF Trigger: AAAGCTGGAGGCAGAAGGAGCCAGAGTTGAAGGCCAGTCTTCATAACACAGTGAGTTAGAGGCTGGCCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CCA 72 bp | CAGCTCAGCAAAAGTCTTGCTTCTGATCCTCCAAGATaGACAGGGGCTTCTCACTTCCTCCGAAGCTCGTTC | + |
|
Preference number: 3 (lower is better) Translates to: QLSKSLASDPPR*TGASHFLRSSF Trigger: GAACGAGCTTCGGAGGAAGTGAGAAGCCCCTGTCCATCTTGGAGGATCAGAAGCAAGACTTTTGCTGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CCA 72 bp | CAGCAGGATTACAAGTCTAAAGCCACCTCCCACATATaGAAGGCGAGAACTGACAACAGGGAGGCGACCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QQDYKSKATSHI*KARTDNREATS Trigger: AGAGGTCGCCTCCCTGTTGTCAGTTCTCGCCTTCCATATGTGGGAGGTGGCTTTAGACTTGTAATCCTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGGTTGTGGTGATCATGAGTGTGGTGGTGAACATGAACACCTATAGACCTAGCACCCCCATTTACCTGTaGCTCTGCCCCTGTGCATCC | + |
|
Preference number: 3 (lower is better) Translates to: RVVVIMSVVVNMNTYRPSTPIYL*LCPCAS Trigger: GGATGCACAGGGGCAGAGCAACAGGTAAATGGGGGT...GCTAGGTCTATAGGTGTTCATGTTCACCACCACACTCATGATCACCACAACCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CCA 72 bp | GGCTGCAGAGAGAGACTACAGCTTCAGGATTCACCCTaGATTACGTGCTCAGAATTTACCCTCTCTTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GCRERLQLQDSP*ITCSEFTLSWL Trigger: CAGCCAAGAGAGGGTAAATTCTGAGCACGTAATCCAGGGTGAATCCTGAAGCTGTAGTCTCTCTCTGCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 72 bp | AGAGACCACGAAATGGGCAAGGTATATATGGATTCCTaGTGGTCTGTCCCATCCACACCGGGGAGATATAAC | + |
|
Preference number: 3 (lower is better) Translates to: RDHEMGKVYMDS*WSVPSTPGRYN Trigger: GTTATATCTCCCCGGTGTGGATGGGACAGACCATCAGGAATCCATATATACCTTGCCCATTTCGTGGTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 72 bp | GGGCAGTGTCTGAAGGTGGAGAGAGGTAAGGAAAACTaGCCCTTTAGAAGGTTTCTGAGGGGGAAAGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: GQCLKVERGKEN*PFRRFLRGKEL Trigger: AAGTTCTTTCCCCCTCAGAAACCTTCTAAAGGGTCAGTTTTCCTTACCTCTCTCCACCTTCAGACACTGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR GCA 72 bp | TCAGGACCTCTCCACCCCGGGAGTCATTTCCCTGTGTaGTGTGGAACTAATTTGAAAAGTAAAGTCCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SGPLHPGSHFPV*CGTNLKSKVQG Trigger: TCCTTGGACTTTACTTTTCAAATTAGTTCCACAGCACACAGGGAAATGACTCCCGGGGTGGAGAGGTCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR CAA 90 bp | CTAAGAGGAAACTGGTTTGGAAAGGACACTTTTACATCCCTCCTCTCCTTTGATAGATCATTAGCTGGGTaGCTGACTGAGGATGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: LRGNWFGKDTFTSLLSFDRSLAG*LTEDGP Trigger: GGGTCCATCCTCAGTCAGCAACCCAGCTAATGATCT...ATCAAAGGAGAGGAGGGATGTAAAAGTGTCCTTTCCAAACCAGTTTCCTCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 72 bp | GGAGGACTTTGTTTCACATGGGCAAGGCCCTTGGTTTaGTCCCAATGCATAAACACACACACAAACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: GGLCFTWARPLV*SQCINTHTNTH Trigger: GTGTGTGTTTGTGTGTGTGTTTATGCATTGGGATCAAACCAAGGGCCTTGCCCATGTGAAACAAAGTCCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 72 bp | AGAGCTACCACGTCTATTGATGGAAAGAGAACACACTaGGCCACCCCATCCCATCAAGGATTTAAGATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RATTSIDGKRTH*ATPSHQGFKMA Trigger: AGCCATCTTAAATCCTTGATGGGATGGGGTGGCTCAGTGTGTTCTCTTTCCATCAATAGACGTGGTAGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 72 bp | TATAAGAGCTACCACTGTAAGAGCTACCACGTCTATTaGTGGAAAGAGAACACACTGAGCCACCCCATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: YKSYHCKSYHVY*WKENTLSHPIP Trigger: TGGGATGGGGTGGCTCAGTGTGTTCTCTTTCCATCAATAGACGTGGTAGCTCTTACAGTGGTAGCTCTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CCA 72 bp | CTAACTCACTGTGTTATGAAGACTGGCCTTCAACTCTaGCTCCTTCTGCCTCCAGCTTTTAAGTGCTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LTHCVMKTGLQL*LLLPPAFKCWN Trigger: ATTCCAGCACTTAAAAGCTGGAGGCAGAAGGAGCCAGAGTTGAAGGCCAGTCTTCATAACACAGTGAGTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 72 bp | GAGCAGAGTCCAGAGATCATTAGCTGGGTTGCTGACTaGGGATGGACCCAGAAACTTGAATATTATGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: EQSPEIISWVAD*GWTQKLEYYEH Trigger: GTGTTCATAATATTCAAGTTTCTGGGTCCATCCTCAGTCAGCAACCCAGCTAATGATCTCTGGACTCTGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 72 bp | GAACATGACCACAACAAATATCAGCAAAGCACACACTaGAAACAACAGGATGAGTGGGTACAGAGAGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: EHDHNKYQQSTH*KQQDEWVQRGW Trigger: CCAGCCTCTCTGTACCCACTCATCCTGTTGTTTTCAGTGTGTGCTTTGCTGATATTTGTTGTGGTCATGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 72 bp | CCAAACACCCCCATCCTTCCTTTCTACGAAGGTTTGTaGATAAAATCACCCTCTTCCCTCAGTACCACATCT | + |
|
Preference number: 3 (lower is better) Translates to: PNTPILPFYEGL*IKSPSSLSTTS Trigger: AGATGTGGTACTGAGGGAAGAGGGTGATTTTATTCACAAACCTTCGTAGAAAGGAAGGATGGGGGTGTTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CCA 72 bp | ATCAAGTCCCATCTTCAATCCCTAGCACTGAGTAAGTaGGGCATGGTAGCAAATGCCAGTAATGTCAACACT | + |
|
Preference number: 3 (lower is better) Translates to: IKSHLQSLALSK*GMVANASNVNT Trigger: AGTGTTGACATTACTGGCATTTGCTACCATGCCCCACTTACTCAGTGCTAGGGATTGAAGATGGGACTTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR CAA 90 bp | CATAACACATCACTTTGTAGCTATGATTTTCTATTCAGACAGACAGGCCATCTCAGAATTTACCCTCTCTaGGCTGGCTCCAGGTCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: HNTSLCSYDFLFRQTGHLRIYPL*AGSRSN Trigger: GTTGGACCTGGAGCCAGCCAAGAGAGGGTAAATTCT...GAGATGGCCTGTCTGTCTGAATAGAAAATCATAGCTACAAAGTGATGTGTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CCA 72 bp | CTGTATTTCTGGCTTCTTCTGAAAAACGGAACAATATaGAGATCTGGGTCCATATCCCCGGATAGAAACCCA | + |
|
Preference number: 3 (lower is better) Translates to: LYFWLLLKNGTI*RSGSISPDRNP Trigger: TGGGTTTCTATCCGGGGATATGGACCCAGATCTCCATATTGTTCCGTTTTTCAGAAGAAGCCAGAAATACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGGTTGTGGTGATCATGAGTGTGGTGGTGAACATGAACACCTATAGACCTAGCTATCAGAAAACAGTATaGTTTAGCACCTACAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: RVVVIMSVVVNMNTYRPSYQKTV*FSTYKP Trigger: TGGCTTGTAGGTGCTAAACAATACTGTTTTCTGATA...GCTAGGTCTATAGGTGTTCATGTTCACCACCACACTCATGATCACCACAACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 72 bp | GTTGCAACAATGGTTACAGACCAGGAACATCATATCTaGGAGCATGCTGGTGAGACACATGAGAAAGCAATA | + |
|
Preference number: 3 (lower is better) Translates to: VATMVTDQEHHI*EHAGETHEKAI Trigger: TATTGCTTTCTCATGTGTCTCACCAGCATGCTCTCAGATATGATGTTCCTGGTCTGTAACCATTGTTGCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCCACCCCGGGAGTCATTTCCCTGTGTGCTGTGGAACTAATTTGAAAAGTAAAGATGGACCCAGAAACTaGAATATTATGAACACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: LHPGSHFPVCCGTNLKSKDGPRN*NIMNTV Trigger: TACTGTGTTCATAATATTCAAGTTTCTGGGTCCATC...TTTACTTTTCAAATTAGTTCCACAGCACACAGGGAAATGACTCCCGGGGTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR CAA 90 bp | CATAACACATCACTTTGTAGCTATGATTTTCTATTCAGACAGACAGGCCATCTCATTATGAACACAGTATaGATGACAGCACAGAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: HNTSLCSYDFLFRQTGHLIMNTV*MTAQRA Trigger: GGCCCTCTGTGCTGTCATCAATACTGTGTTCATAAT...GAGATGGCCTGTCTGTCTGAATAGAAAATCATAGCTACAAAGTGATGTGTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR CAA 90 bp | CATAACACATCACTTTGTAGCTATGATTTTCTATTCAGACAGACAGGCCATCTCAAGGCAGTGACAGTTTaGTGTGTGTGTATACCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: HNTSLCSYDFLFRQTGHLKAVTV*CVCIPR Trigger: CCTTGGTATACACACACACAAAACTGTCACTGCCTT...GAGATGGCCTGTCTGTCTGAATAGAAAATCATAGCTACAAAGTGATGTGTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 72 bp | ATTGTGACTCTTGACAATTGTAATTTTGCCAGGCTTTaGGGCACAGTGAGGGAAGTAGTGATTATGTTTACA | + |
|
Preference number: 3 (lower is better) Translates to: IVTLDNCNFARL*GTVREVVIMFT Trigger: TGTAAACATAATCACTACTTCCCTCACTGTGCCTCAAAGCCTGGCAAAATTACAATTGTCAAGAGTCACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 72 bp | GTTTGGAAAGGACACTTTTACATCCCTCCTCTCCTTTaGTCCATTGGTATCATGATAAAAGTTTCTCCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: VWKGHFYIPPLL*SIGIMIKVSPN Trigger: ATTTGGAGAAACTTTTATCATGATACCAATGGATCAAAGGAGAGGAGGGATGTAAAAGTGTCCTTTCCAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGACATCATTGAGTAATGTGCCTATGAAATACATAAGAGAAGTGTGCACAAAGTGCTGTGGAACTAATTaGAAAAGTAAAGTCCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: WTSLSNVPMKYIREVCTKCCGTN*KSKVQG Trigger: TCCTTGGACTTTACTTTTCAAATTAGTTCCACAGCA...CTTTGTGCACACTTCTCTTATGTATTTCATAGGCACATTACTCAATGATGTCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 72 bp | AACACAAATCTTTTTACACAGTTACATTGGGGAACATaGCCACAACAAATATCAGCAAAGCACACACTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: NTNLFTQLHWGT*PQQISAKHTLK Trigger: TTTCAGTGTGTGCTTTGCTGATATTTGTTGTGGTCATGTTCCCCAATGTAACTGTGTAAAAAGATTTGTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR TCA 72 bp | CAATCAATCATGCAAGGTGTGAAGATATTAAAAGACTaGGTCACTTTATCAAGTCTTCAGCTTCCAACAAGT | + |
|
Preference number: 3 (lower is better) Translates to: QSIMQGVKILKD*VTLSSLQLPTS Trigger: ACTTGTTGGAAGCTGAAGACTTGATAAAGTGACTCAGTCTTTTAATATCTTCACACCTTGCATGATTGATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR GCA 90 bp | TACAGCTCAGAGGTAGAGCACACTTGCCTAGTGCTCATGAGCCACAGGCCCATTACACGGCCATCACCCTaGAGGCCGTGGCGCCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: YSSEVEHTCLVLMSHRPITRPSP*RPWRRR Trigger: GCGGCGGCGCCACGGCCTGCAGGGTGATGGCCGTGT...AATGGGCCTGTGGCTCATGAGCACTAGGCAAGTGTGCTCTACCTCTGAGCTGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR CCA 90 bp | ACCTCCCACATATGGAAGGCGAGAACTGACAACAGGGAGGCGACCTCTGACCTCGACCAGCAGTCGCGGTaGGGGCACTTGCCCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: TSHIWKARTDNREATSDLDQQSR*GHLPSM Trigger: CATGCTGGGCAAGTGCCCCCACCGCGACTGCTGGTC...GAGGTCAGAGGTCGCCTCCCTGTTGTCAGTTCTCGCCTTCCATATGTGGGAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR CCA 90 bp | GCAGATGCCTCCAGCCTACCTGGTCTACATAATGAGTTCCAGGCCAGTCAGGGCCAGGGAGGAAAGGCCTaGCTTCCACAGCCCCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ADASSLPGLHNEFQASQGQGGKA*LPQPRG Trigger: CCCTCGGGGCTGTGGAAGCCAGGCCTTTCCTCCCTG...GCCCTGACTGGCCTGGAACTCATTATGTAGACCAGGTAGGCTGGAGGCATCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR TCA 90 bp | GTGCTCAGAATTTACCCTCTCTTGGCTGGCTCCAGGTCCAACCTCAGCCCTCAGAACATGCGGCCGCCGTaGGCACACAGCACCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLRIYPLLAGSRSNLSPQNMRPP*AHSTLV Trigger: CACCAAGGTGCTGTGTGCTCACGGCGGCCGCATGTT...CTGAGGGCTGAGGTTGGACCTGGAGCCAGCCAAGAGAGGGTAAATTCTGAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR CCA 90 bp | ACCTCCCACATATGGAAGGCGAGAACTGACAACAGGGAGGCGACCTCTGACCTCCACTTGCCCAGCATGTaGCGGCGACACAAGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSHIWKARTDNREATSDLHLPSM*RRHKCS Trigger: GCTGCACTTGTGTCGCCGCCACATGCTGGGCAAGTG...GAGGTCAGAGGTCGCCTCCCTGTTGTCAGTTCTCGCCTTCCATATGTGGGAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CAA 72 bp | TTCACCCTGGATTACGTGCTCAGAATTTACCCTCTCTaGGCTGGCTCCAGGTCCAACCTCAGCCCTCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FTLDYVLRIYPL*AGSRSNLSPQP Trigger: CGGCTGAGGGCTGAGGTTGGACCTGGAGCCAGCCAAGAGAGGGTAAATTCTGAGCACGTAATCCAGGGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CAA 72 bp | CCCCGGATAGAAACCCAAAGTGAGGAACCACCACTGTaGGGACAGCTTGCCACAGCCCTTCTTCCTTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: PRIETQSEEPPL*GQLATALLPYP Trigger: GGGGTAAGGAAGAAGGGCTGTGGCAAGCTGTCCCAACAGTGGTGGTTCCTCACTTTGGGTTTCTATCCGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR GCA 90 bp | ATGGAGGCCGATGAAAATTTCGGCAGGAGAAACAGAACTGCAATATCCTTAGGTTGGCCGCGCAGGTCCTaGAGGAACATGCGGCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: MEADENFGRRNRTAISLGWPRRS*RNMRPP Trigger: CGGCGGCCGCATGTTCCTGCAGGACCTGCGCGGCCA...ACCTAAGGATATTGCAGTTCTGTTTCTCCTGCCGAAATTTTCATCGGCCTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR CCA 90 bp | CTAAGAGGAAACTGGTTTGGAAAGGACACTTTTACATCCCTCCTCTCCTTTGATCAGCAGGAAGCGCTCTaGACCCGCGCGCCGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LRGNWFGKDTFTSLLSFDQQEAL*TRAPQH Trigger: GTGCTGCGGCGCGCGGGTCCAGAGCGCTTCCTGCTG...ATCAAAGGAGAGGAGGGATGTAAAAGTGTCCTTTCCAAACCAGTTTCCTCTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR CCA 90 bp | GCTCCAGGTCCAACCTCAGCCCTCAGCCGCAAGTGTATTTTCGTTTCCACCCTGTTTCCCAAGGCCTTGTaGTTGCTCAGTAGAAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: APGPTSALSRKCIFVSTLFPKAL*LLSRSR Trigger: TCGGCTTCTACTGAGCAACCACAAGGCCTTGGGAAA...CAGGGTGGAAACGAAAATACACTTGCGGCTGAGGGCTGAGGTTGGACCTGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR CCA 90 bp | AGGGTTGTGGTGATCATGAGTGTGGTGGTGAACATGAACACCTATAGACCTAGCGCAGCATGGATGAGCTaGTGGGAGCGTTTGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVVVIMSVVVNMNTYRPSAAWMS*WERLQG Trigger: GCCCTGCAAACGCTCCCACCAGCTCATCCATGCTGC...GCTAGGTCTATAGGTGTTCATGTTCACCACCACACTCATGATCACCACAACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CAA 72 bp | AAACCCAAAGTGAGGAACCACCACTGTTGGGACAGCTaGCCACAGCCCTTCTTCCTTACCCCCATTTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: KPKVRNHHCWDS*PQPFFLTPIYL Trigger: CAGGTAAATGGGGGTAAGGAAGAAGGGCTGTGGCAAGCTGTCCCAACAGTGGTGGTTCCTCACTTTGGGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR CCA 90 bp | GAGCACACTTGCCTAGTGCTCATGAGCCACAGGCCCATTCCCAGTATCATATACCATCTGACAGACCTCTaGGAAAAGGCAGGGGTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: EHTCLVLMSHRPIPSIIYHLTDL*EKAGVV Trigger: AACGACCCCTGCCTTTTCCCAGAGGTCTGTCAGATG...GTATATGATACTGGGAATGGGCCTGTGGCTCATGAGCACTAGGCAAGTGTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR TCA 90 bp | GCTCCAGGTCCAACCTCAGCCCTCAGCCGCAAGTGTATTTTCGTTTCCACCCTGGAAATTCACGACGCTTaGAACACTAAGTTCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: APGPTSALSRKCIFVSTLEIHDA*NTKFLV Trigger: GACCAAGAACTTAGTGTTTCAAGCGTCGTGAATTTC...CAGGGTGGAAACGAAAATACACTTGCGGCTGAGGGCTGAGGTTGGACCTGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR GCA 90 bp | CTAAGAGGAAACTGGTTTGGAAAGGACACTTTTACATCCCTCCTCTCCTTTGATCGCAGCTCCACCTCCTaGAGCAGGAAGCGCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRGNWFGKDTFTSLLSFDRSSTS*SRKRSG Trigger: TCCAGAGCGCTTCCTGCTGCAGGAGGTGGAGCTGCG...ATCAAAGGAGAGGAGGGATGTAAAAGTGTCCTTTCCAAACCAGTTTCCTCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR CCA 90 bp | CATAACACATCACTTTGTAGCTATGATTTTCTATTCAGACAGACAGGCCATCTCTCCGACAGCTCCACGTaGCCGCGCAGGTCCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HNTSLCSYDFLFRQTGHLSDSST*PRRSCR Trigger: CCTGCAGGACCTGCGCGGCCACGTGGAGCTGTCGGA...GAGATGGCCTGTCTGTCTGAATAGAAAATCATAGCTACAAAGTGATGTGTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR CCA 90 bp | GTGCTCAGAATTTACCCTCTCTTGGCTGGCTCCAGGTCCAACCTCAGCCCTCAGACGTTGATAGGTGTGTaGATATCATGGGACAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLRIYPLLAGSRSNLSPQTLIGV*ISWDRE Trigger: TTCTCTGTCCCATGATATCCACACACCTATCAACGT...CTGAGGGCTGAGGTTGGACCTGGAGCCAGCCAAGAGAGGGTAAATTCTGAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR TCA 90 bp | CATAACACATCACTTTGTAGCTATGATTTTCTATTCAGACAGACAGGCCATCTCGGCTTCCTGGGCGACTaGGCACGGGCAGGGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HNTSLCSYDFLFRQTGHLGFLGD*ARAGRK Trigger: TTTCCTCCCTGCCCGTGCTCAGTCGCCCAGGAAGCC...GAGATGGCCTGTCTGTCTGAATAGAAAATCATAGCTACAAAGTGATGTGTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR CCA 90 bp | CATTCAGGGGCTGCAGAGAGAGACTACAGCTTCAGGATTCACCCTGGATTACGTGGTGTGTGGATATCATaGGACAGAGAACAGGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HSGAAERDYSFRIHPGLRGVWIS*DREQVD Trigger: GTCTACCTGTTCTCTGTCCCATGATATCCACACACC...ACGTAATCCAGGGTGAATCCTGAAGCTGTAGTCTCTCTCTGCAGCCCCTGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR GCA 90 bp | GAGCACACTTGCCTAGTGCTCATGAGCCACAGGCCCATTCCCAGTATCATATACCTCGCACAAAGGATTTaGACACGTGAAACTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EHTCLVLMSHRPIPSIIYLAQRI*TRETCC Trigger: GCAACAAGTTTCACGTGTGCAAATCCTTTGTGCGAG...GTATATGATACTGGGAATGGGCCTGTGGCTCATGAGCACTAGGCAAGTGTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CAA 72 bp | TACATAAGAGAAGTGTGCACAAAGGCAGTGACAGTTTaGTGTGTGTGTATACCAAGGCAGGGAGAGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YIREVCTKAVTV*CVCIPRQGEVG Trigger: CCCCACCTCTCCCTGCCTTGGTATACACACACACAAAACTGTCACTGCCTTTGTGCACACTTCTCTTATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR TCA 90 bp | TGGACATCATTGAGTAATGTGCCTATGAAATACATAAGAGAAGTGTGCACAAAGGCAGCTGCCCTTCATTaGGGCCAAAAAGCCCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: WTSLSNVPMKYIREVCTKAAALH*GQKAPG Trigger: GCCGGGGGCTTTTTGGCCTCAATGAAGGGCAGCTGC...CTTTGTGCACACTTCTCTTATGTATTTCATAGGCACATTACTCAATGATGTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR GCA 90 bp | CTAAGAGGAAACTGGTTTGGAAAGGACACTTTTACATCCCTCCTCTCCTTTGATCCAAGGCCTTGTGGTTaGTCAGTAGAAGCCGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRGNWFGKDTFTSLLSFDPRPCG*SVEAEW Trigger: CCACTCGGCTTCTACTGAGCAACCACAAGGCCTTGG...ATCAAAGGAGAGGAGGGATGTAAAAGTGTCCTTTCCAAACCAGTTTCCTCTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR CCA 90 bp | CATAACACATCACTTTGTAGCTATGATTTTCTATTCAGACAGACAGGCCATCTCTTGAGGGTGGCAGCATaGATGAGCTGGTGGGAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: HNTSLCSYDFLFRQTGHLLRVAA*MSWWER Trigger: ACGCTCCCACCAGCTCATCCATGCTGCCACCCTCAA...GAGATGGCCTGTCTGTCTGAATAGAAAATCATAGCTACAAAGTGATGTGTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CAA 72 bp | TTCGGCAGGAGAAACAGAACTGCAATATCCTTAGGTTaGCTTCCAAAAGATCAGGCAGCTGGAATGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FGRRNRTAISLG*LPKDQAAGMEA Trigger: TGCCTCCATTCCAGCTGCCTGATCTTTTGGAAGCAAACCTAAGGATATTGCAGTTCTGTTTCTCCTGCCGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR GCA 90 bp | TGGACATCATTGAGTAATGTGCCTATGAAATACATAAGAGAAGTGTGCACAAAGAGGCAGGGGTCGTTCTaGAAAAGCAGGATTCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WTSLSNVPMKYIREVCTKRQGSF*KSRIRS Trigger: GCTGCGAATCCTGCTTTTGCAGAACGACCCCTGCCT...CTTTGTGCACACTTCTCTTATGTATTTCATAGGCACATTACTCAATGATGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CAA 72 bp | GATGGACCCAGAAACTTGAATATTATGAACACAGTATaGATGACAGCACAGAGGGCCCAAGCCACAAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: DGPRNLNIMNTV*MTAQRAQATKC Trigger: GCATTTTGTGGCTTGGGCCCTCTGTGCTGTCATCAATACTGTGTTCATAATATTCAAGTTTCTGGGTCCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CAA 72 bp | CCCGGGAGTCATTTCCCTGTGTGCTGTGGAACTAATTaGAAAAGTAAAGTCCAAGGAAACACTGCTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PGSHFPVCCGTN*KSKVQGNTALF Trigger: AAACAGAGCAGTGTTTCCTTGGACTTTACTTTTCAAATTAGTTCCACAGCACACAGGGAAATGACTCCCGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR TCA 90 bp | ATGGAGGCCGATGAAAATTTCGGCAGGAGAAACAGAACTGCAATATCCTTAGGTAAGGATTTGCACACGTaGAACTTGTTGCATCTATCC | + |
|
Preference number: 4 (lower is better) Translates to: MEADENFGRRNRTAISLGKDLHT*NLLHLS Trigger: GGATAGATGCAACAAGTTTCACGTGTGCAAATCCTT...ACCTAAGGATATTGCAGTTCTGTTTCTCCTGCCGAAATTTTCATCGGCCTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR CCA 90 bp | CATAACACATCACTTTGTAGCTATGATTTTCTATTCAGACAGACAGGCCATCTCCGGCTTTTCAGGACTTaGACGTTGATAGGTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HNTSLCSYDFLFRQTGHLRLFRT*TLIGVW Trigger: CCACACACCTATCAACGTCCAAGTCCTGAAAAGCCG...GAGATGGCCTGTCTGTCTGAATAGAAAATCATAGCTACAAAGTGATGTGTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CAA 72 bp | TTTACTTTAAAGTTTAGTCCAGGACTTAGATGTACCTaGCTGGTGGAGGACTTTGTTTCACATGGGCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FTLKFSPGLRCT*LVEDFVSHGQG Trigger: GCCTTGCCCATGTGAAACAAAGTCCTCCACCAGCAAGGTACATCTAAGTCCTGGACTAAACTTTAAAGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR TCA 90 bp | TGGACATCATTGAGTAATGTGCCTATGAAATACATAAGAGAAGTGTGCACAAAGTGTTGCATCTATCCTTaGGGCTGCAGTAGCCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: WTSLSNVPMKYIREVCTKCCIYP*GCSSHK Trigger: TTTATGGCTACTGCAGCCTCAAGGATAGATGCAACA...CTTTGTGCACACTTCTCTTATGTATTTCATAGGCACATTACTCAATGATGTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CAA 72 bp | GGTTTGGAAAGGACACTTTTACATCCCTCCTCTCCTTaGATCCATTGGTATCATGATAAAAGTTTCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GLERTLLHPSSP*IHWYHDKSFSK Trigger: TTTGGAGAAACTTTTATCATGATACCAATGGATCAAAGGAGAGGAGGGATGTAAAAGTGTCCTTTCCAAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| 3UTR CAA 72 bp | TATGGAAAGAAACACAAATCTTTTTACACAGTTACATaGGGGAACATGACCACAACAAATATCAGCAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YGKKHKSFYTVT*GNMTTTNISKA Trigger: TGCTTTGCTGATATTTGTTGTGGTCATGTTCCCCAATGTAACTGTGTAAAAAGATTTGTGTTTCTTTCCATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS GCA 90 bp | ACCTCGGCCTCTGCGTCCCACGGGCCGTCGCGCAGCTCCACCTCCTaGAGCAGGAAGCGCTCTGGACCCGCGCGCCGCAGCACGGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: TSASASHGPSRSSTS*SRKRSGPARRSTAR Trigger: GCGGGCCGTGCTGCGGCGCGCGGGTCCAGAGCGCTTCCTGCTGCAGGAGGTGGAGCTGCGCGACGGCCCGTGGGACGCAGAGGCCGAGGT 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS CCA 90 bp | ATTGGGGCTTCCTGGGCGACTGAGCACGGGCAGGGAGGAAAGGCCTaGCTTCCACAGCCCCGAGGGCTCCTTGTTTCCCAAGGCCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: IGASWATEHGQGGKA*LPQPRGLLVSQGLV Trigger: CACAAGGCCTTGGGAAACAAGGAGCCCTCGGGGCTGTGGAAGCCAGGCCTTTCCTCCCTGCCCGTGCTCAGTCGCCCAGGAAGCCCCAAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR CAA 90 bp | GAGCACACTTGCCTAGTGCTCATGAGCCACAGGCCCATTCCCAGTATCATATACTCGCGGTGGGGGCACTaGCCCAGCATGTGGCGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: EHTCLVLMSHRPIPSIIYSRWGH*PSMWRR Trigger: TCGCCGCCACATGCTGGGCAAGTGCCCCCACCGCGA...GTATATGATACTGGGAATGGGCCTGTGGCTCATGAGCACTAGGCAAGTGTGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR CAA 90 bp | GTGCTCAGAATTTACCCTCTCTTGGCTGGCTCCAGGTCCAACCTCAGCCCTCAGTTCAGGACTTGGACGTaGATAGGTGTGTGGATATCA | + |
|
Preference number: 5 (lower is better) Translates to: VLRIYPLLAGSRSNLSPQFRTWT*IGVWIS Trigger: TGATATCCACACACCTATCAACGTCCAAGTCCTGAA...CTGAGGGCTGAGGTTGGACCTGGAGCCAGCCAAGAGAGGGTAAATTCTGAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR CAA 90 bp | AGAAGGTTTCTGAGGGGGAAAGAACTTCCAACACTTGGAAACAGATTTGCCATGAGCCCCGAGGGCTCCTaGTTTCCCAAGGCCTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RRFLRGKELPTLGNRFAMSPEGS*FPKALW Trigger: CCACAAGGCCTTGGGAAACAAGGAGCCCTCGGGGCT...CATGGCAAATCTGTTTCCAAGTGTTGGAAGTTCTTTCCCCCTCAGAAACCTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR CAA 90 bp | GTCCAGGACTTAGATGTACCTTGCTGGTGGAGGACTTTGTTTCACATGGGCAAGCCGGCTTTTCAGGACTaGGACGTTGATAGGTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VQDLDVPCWWRTLFHMGKPAFQD*DVDRCV Trigger: CACACACCTATCAACGTCCAAGTCCTGAAAAGCCGG...CTTGCCCATGTGAAACAAAGTCCTCCACCAGCAAGGTACATCTAAGTCCTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR CAA 90 bp | GTGCTCAGAATTTACCCTCTCTTGGCTGGCTCCAGGTCCAACCTCAGCCCTCAGTTCTCTTCAAGCATCTaGTGCAACTTCTTATGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLRIYPLLAGSRSNLSPQFSSSI*CNFLCL Trigger: CAGACATAAGAAGTTGCACAAGATGCTTGAAGAGAA...CTGAGGGCTGAGGTTGGACCTGGAGCCAGCCAAGAGAGGGTAAATTCTGAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR CAA 90 bp | ATGGAGGCCGATGAAAATTTCGGCAGGAGAAACAGAACTGCAATATCCTTAGGTTGGTCCTCTAGCAACTaGAGGGTGGCAGCATGGATG | + |
|
Preference number: 5 (lower is better) Translates to: MEADENFGRRNRTAISLGWSSSN*RVAAWM Trigger: CATCCATGCTGCCACCCTCAAGTTGCTAGAGGACCA...ACCTAAGGATATTGCAGTTCTGTTTCTCCTGCCGAAATTTTCATCGGCCTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS CCA 90 bp | ACAGAGATTATCTGGAAATTCACGACGCTTGAAACACTAAGTTCTTaGTCCTCTAGCAACTTGAGGGTGGCAGCATGGATGAGCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TEIIWKFTTLETLSS*SSSNLRVAAWMSWW Trigger: CCACCAGCTCATCCATGCTGCCACCCTCAAGTTGCTAGAGGACCAAGAACTTAGTGTTTCAAGCGTCGTGAATTTCCAGATAATCTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS TCA 90 bp | CTCGCACAAAGGATTTGCACACGTGAAACTTGTTGCATCTATCCTTaGGGCTGCAGTAGCCATAAAGGACATCGACACCTTTGTTGTACA | + |
|
Preference number: 5 (lower is better) Translates to: LAQRICTRETCCIYP*GCSSHKGHRHLCCT Trigger: TGTACAACAAAGGTGTCGATGTCCTTTATGGCTACTGCAGCCTCAAGGATAGATGCAACAAGTTTCACGTGTGCAAATCCTTTGTGCGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS-3UTR CAA 90 bp | TGGACATCATTGAGTAATGTGCCTATGAAATACATAAGAGAAGTGTGCACAAAGCCCAAGGCCTTGTGGTaGCTCAGTAGAAGCCGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: WTSLSNVPMKYIREVCTKPKALW*LSRSRV Trigger: CACTCGGCTTCTACTGAGCAACCACAAGGCCTTGGG...CTTTGTGCACACTTCTCTTATGTATTTCATAGGCACATTACTCAATGATGTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS GCA 72 bp | TCTGCGTCCCACGGGCCGTCGCGCAGCTCCACCTCCTaGAGCAGGAAGCGCTCTGGACCCGCGCGCCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SASHGPSRSSTS*SRKRSGPARRS Trigger: GCTGCGGCGCGCGGGTCCAGAGCGCTTCCTGCTGCAGGAGGTGGAGCTGCGCGACGGCCCGTGGGACGCAGA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS TCA 72 bp | TGGCCGCGCAGGTCCTGCAGGAACATGCGGCCGCCGTaGGCACACAGCACCTTGGTGAGGAACGCGCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: WPRRSCRNMRPP*AHSTLVRNAHR Trigger: TCTGTGCGCGTTCCTCACCAAGGTGCTGTGTGCTCACGGCGGCCGCATGTTCCTGCAGGACCTGCGCGGCCA 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS CCA 72 bp | TCCTGGGCGACTGAGCACGGGCAGGGAGGAAAGGCCTaGCTTCCACAGCCCCGAGGGCTCCTTGTTTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: SWATEHGQGGKA*LPQPRGLLVSQ Trigger: TTGGGAAACAAGGAGCCCTCGGGGCTGTGGAAGCCAGGCCTTTCCTCCCTGCCCGTGCTCAGTCGCCCAGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS CAA 90 bp | TCATGGGACAGAGAACAGGTAGACCAGCAGTCGCGGTGGGGGCACTaGCCCAGCATGTGGCGGCGACACAAGTGCAGCTGGTCGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SWDREQVDQQSRWGH*PSMWRRHKCSWSQP Trigger: GGGCTGCGACCAGCTGCACTTGTGTCGCCGCCACATGCTGGGCAAGTGCCCCCACCGCGACTGCTGGTCTACCTGTTCTCTGTCCCATGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS CAA 72 bp | AGAGAACAGGTAGACCAGCAGTCGCGGTGGGGGCACTaGCCCAGCATGTGGCGGCGACACAAGTGCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: REQVDQQSRWGH*PSMWRRHKCSW Trigger: CCAGCTGCACTTGTGTCGCCGCCACATGCTGGGCAAGTGCCCCCACCGCGACTGCTGGTCTACCTGTTCTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS CAA 90 bp | ACGGGCAGGGAGGAAAGGCCTGGCTTCCACAGCCCCGAGGGCTCCTaGTTTCCCAAGGCCTTGTGGTTGCTCAGTAGAAGCCGAGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: TGREERPGFHSPEGS*FPKALWLLSRSRVV Trigger: GACCACTCGGCTTCTACTGAGCAACCACAAGGCCTTGGGAAACAAGGAGCCCTCGGGGCTGTGGAAGCCAGGCCTTTCCTCCCTGCCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS CCA 72 bp | TCATGGGACAGAGAACAGGTAGACCAGCAGTCGCGGTaGGGGCACTTGCCCAGCATGTGGCGGCGACACAAG | + |
|
Preference number: 6 (lower is better) Translates to: SWDREQVDQQSR*GHLPSMWRRHK Trigger: CTTGTGTCGCCGCCACATGCTGGGCAAGTGCCCCCACCGCGACTGCTGGTCTACCTGTTCTCTGTCCCATGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS TCA 72 bp | GCAGCATGGATGAGCTGGTGGGAGCGTTTGCAGGGCTaGAAGGGGCATTCACCTCGCACAAAGGATTTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: AAWMSWWERLQG*KGHSPRTKDLH Trigger: GTGCAAATCCTTTGTGCGAGGTGAATGCCCCTTTCAGCCCTGCAAACGCTCCCACCAGCTCATCCATGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS CCA 72 bp | CACAGCCCCGAGGGCTCCTTGTTTCCCAAGGCCTTGTaGTTGCTCAGTAGAAGCCGAGTGGTCTTTCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HSPEGSLFPKAL*LLSRSRVVFLF Trigger: GAAGAGAAAGACCACTCGGCTTCTACTGAGCAACCACAAGGCCTTGGGAAACAAGGAGCCCTCGGGGCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS CAA 72 bp | TTCCACAGCCCCGAGGGCTCCTTGTTTCCCAAGGCCTaGTGGTTGCTCAGTAGAAGCCGAGTGGTCTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: FHSPEGSLFPKA*WLLSRSRVVFL Trigger: GAGAAAGACCACTCGGCTTCTACTGAGCAACCACAAGGCCTTGGGAAACAAGGAGCCCTCGGGGCTGTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS CCA 72 bp | TTCAGGACTTGGACGTTGATAGGTGTGTGGATATCATaGGACAGAGAACAGGTAGACCAGCAGTCGCGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: FRTWTLIGVWIS*DREQVDQQSRW Trigger: CCACCGCGACTGCTGGTCTACCTGTTCTCTGTCCCATGATATCCACACACCTATCAACGTCCAAGTCCTGAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS CCA 72 bp | CCCCGGCTTTTCAGGACTTGGACGTTGATAGGTGTGTaGATATCATGGGACAGAGAACAGGTAGACCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PRLFRTWTLIGV*ISWDREQVDQQ Trigger: CTGCTGGTCTACCTGTTCTCTGTCCCATGATATCCACACACCTATCAACGTCCAAGTCCTGAAAAGCCGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS CCA 72 bp | ATCTGGAAATTCACGACGCTTGAAACACTAAGTTCTTaGTCCTCTAGCAACTTGAGGGTGGCAGCATGGATG | + |
|
Preference number: 6 (lower is better) Translates to: IWKFTTLETLSS*SSSNLRVAAWM Trigger: CATCCATGCTGCCACCCTCAAGTTGCTAGAGGACCAAGAACTTAGTGTTTCAAGCGTCGTGAATTTCCAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||
| CDS TCA 72 bp | AGGATTTGCACACGTGAAACTTGTTGCATCTATCCTTaGGGCTGCAGTAGCCATAAAGGACATCGACACCTT | + |
|
Preference number: 6 (lower is better) Translates to: RICTRETCCIYP*GCSSHKGHRHL Trigger: AAGGTGTCGATGTCCTTTATGGCTACTGCAGCCTCAAGGATAGATGCAACAAGTTTCACGTGTGCAAATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058524.3 |
||