RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZC3H7B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022390

Ensembl transcript IDs: ENSMUST00000109554.3, ENSMUST00000230946.2

Found 285 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACCTGCTTGTGTCTCAGCATCCCTTCCCCAGGTCCCAGGGATGTTaGATGGGACTGAGGAGCCCAGAGGCTCCAGCTACTAATGGGTGG +
Preference number: 1 (lower is better)
Translates to: DLLVSQHPFPRSQGC*MGLRSPEAPATNGW
Trigger: CCACCCATTAGTAGCTGGAGCCTCTGGGCTCCTCAGTCCCATGCAACATCCCTGGGACCTGGGGAAGGGATGCTGAGACACAAGCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR CCA 90 bp AGAGGAGACGGTGCATGCCATGGTTATCAGGAGAAGGTTGGGCAGTaGCAGGATGAGGGGTGGGTGGGTGGGTCCTTTATGCCCAGGTGC +
Preference number: 1 (lower is better)
Translates to: RGDGACHGYQEKVGQ*QDEGWVGGSFMPRC
Trigger: GCACCTGGGCATAAAGGACCCACCCACCCACCCCTCATCCTGCCACTGCCCAACCTTCTCCTGATAACCATGGCATGCACCGTCTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR GCA 90 bp GGCCGCCTTCCCACTCTTCATATTCCTCAGAGCCTCCCCACGCTTTaGACCTTGTCAGAACCTGAGCTCATGGTGCCTGTATTCTGCCAC +
Preference number: 1 (lower is better)
Translates to: GRLPTLHIPQSLPTL*TLSEPELMVPVFCH
Trigger: GTGGCAGAATACAGGCACCATGAGCTCAGGTTCTGACAAGGTGCAAAGCGTGGGGAGGCTCTGAGGAATATGAAGAGTGGGAAGGCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR GCA 90 bp ATGGATCTGTGGGAAGCTAGCAGTCAGAGCAGGTGTGGGCCACCCTaGCTTTTCTGCCCCAATCATCTGAGCCACGGCTCCAGTCTCAAT +
Preference number: 1 (lower is better)
Translates to: MDLWEASSQSRCGPP*LFCPNHLSHGSSLN
Trigger: ATTGAGACTGGAGCCGTGGCTCAGATGATTGGGGCAGAAAAGGCAGGGTGGCCCACACCTGCTCTGACTGCTAGCTTCCCACAGATCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR TCA 90 bp TGGGTGGGTGGGTCCTTTATGCCCAGGTGCCTATCACTGTGCCCTTaGGCTCTAGCAACCCTGGCTGGAGGAGAAATAGGAGTGTCTTCA +
Preference number: 1 (lower is better)
Translates to: WVGGSFMPRCLSLCP*ALATLAGGEIGVSS
Trigger: TGAAGACACTCCTATTTCTCCTCCAGCCAGGGTTGCTAGAGCTCAAGGGCACAGTGATAGGCACCTGGGCATAAAGGACCCACCCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR CCA 90 bp ACAGAGGGTTCCCAGGAAAGAGAGGCTATTTCTCATAGTGGCCCATaGAGCCTAGGCCGCCTTCCCACTCTTCATATTCCTCAGAGCCTC +
Preference number: 1 (lower is better)
Translates to: TEGSQEREAISHSGP*SLGRLPTLHIPQSL
Trigger: GAGGCTCTGAGGAATATGAAGAGTGGGAAGGCGGCCTAGGCTCCATGGGCCACTATGAGAAATAGCCTCTCTTTCCTGGGAACCCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR CCA 90 bp GCCCAGGTGCCTATCACTGTGCCCTTGAGCTCTAGCAACCCTGGCTaGAGGAGAAATAGGAGTGTCTTCATTCTATCTCACTCCTTGATA +
Preference number: 1 (lower is better)
Translates to: AQVPITVPLSSSNPG*RRNRSVFILSHSLI
Trigger: TATCAAGGAGTGAGATAGAATGAAGACACTCCTATTTCTCCTCCAGCCAGGGTTGCTAGAGCTCAAGGGCACAGTGATAGGCACCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR GCA 90 bp GGGGCGACATATATACACACTAAAACAAGGCTGGTGACAACAGACTaGAACACCACGGGTCAGGAGAACAAGTGTCATCCACATTCACGG +
Preference number: 1 (lower is better)
Translates to: GATYIHTKTRLVTTD*NTTGQENKCHPHSR
Trigger: CCGTGAATGTGGATGACACTTGTTCTCCTGACCCGTGGTGTTGCAGTCTGTTGTCACCAGCCTTGTTTTAGTGTGTATATATGTCGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR TCA 90 bp TATGCATCACAGGGGCGACATATATACACACTAAAACAAGGCTGGTaGCAACAGACTGCAACACCACGGGTCAGGAGAACAAGTGTCATC +
Preference number: 1 (lower is better)
Translates to: YASQGRHIYTLKQGW*QQTATPRVRRTSVI
Trigger: GATGACACTTGTTCTCCTGACCCGTGGTGTTGCAGTCTGTTGTCACCAGCCTTGTTTTAGTGTGTATATATGTCGCCCCTGTGATGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR CCA 90 bp CCCAGATCTCAGGGACCCCTGGACAGACGAACAGTAGAAAAACCCTaGATTCATTCTTCTTTGGTGGGAAACAAACACGAAATGACTTCC +
Preference number: 1 (lower is better)
Translates to: PRSQGPLDRRTVEKP*IHSSLVGNKHEMTS
Trigger: GGAAGTCATTTCGTGTTTGTTTCCCACCAAAGAAGAATGAATCCAGGGTTTTTCTACTGTTCGTCTGTCCAGGGGTCCCTGAGATCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR TCA 90 bp AAAAACCCTGGATTCATTCTTCTTTGGTGGGAAACAAACACGAAATaGCTTCCTTTTCCTGAGCACACTGGTATTCTAGACATGGATCTG +
Preference number: 1 (lower is better)
Translates to: KNPGFILLWWETNTK*LPFPEHTGILDMDL
Trigger: CAGATCCATGTCTAGAATACCAGTGTGCTCAGGAAAAGGAAGTCATTTCGTGTTTGTTTCCCACCAAAGAAGAATGAATCCAGGGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR TCA 90 bp CTGCCAGCAGCCAAACTCTGCAGTGCTAGCCAGCTGGGGTCAGGGAAGAGGGGCTTTAAAGCTGTAGGCTaGAGCTGGCCAGGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: LPAAKLCSASQLGSGKRGFKAVG*SWPGPS
Trigger: GGAGGGGCCTGGCCAGCTTCAGCCTACAGCTTTAAA...GCCCCTCTTCCCTGACCCCAGCTGGCTAGCACTGCAGAGTTTGGCTGCTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR TCA 90 bp GGTCTACAACTGTGGCTCACAAAGGAGAGGCCCGGGCAGGGGGTGGTTGTTAGGCCCTGTGCTGTGTCCTaGTCTGGCCCCAGGGAAAGG +
Preference number: 2 (lower is better)
Translates to: GLQLWLTKERPGQGVVVRPCAVS*SGPRER
Trigger: CCTTTCCCTGGGGCCAGATCAGGACACAGCACAGGG...CCTAACAACCACCCCCTGCCCGGGCCTCTCCTTTGTGAGCCACAGTTGTAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR CCA 90 bp CTGCCAGCAGCCAAACTCTGCAGTGCTAGCCAGCTGGGGTCAGGGAAGAGGGGCAGGATGAGGGGTGGGTaGGTGGGTCCTTTATGCCCA +
Preference number: 2 (lower is better)
Translates to: LPAAKLCSASQLGSGKRGRMRGG*VGPLCP
Trigger: TGGGCATAAAGGACCCACCCACCCACCCCTCATCCT...GCCCCTCTTCCCTGACCCCAGCTGGCTAGCACTGCAGAGTTTGGCTGCTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR CAA 90 bp GGCAGGGGAGAGGAGACGGTGCATGCCATGGTTATCAGGAGAAGGTaGGGCAGTGGCAGGATGAGGGGTGGGTGGGTGGGTCCTTTATGC +
Preference number: 2 (lower is better)
Translates to: GRGEETVHAMVIRRR*GSGRMRGGWVGPLC
Trigger: GCATAAAGGACCCACCCACCCACCCCTCATCCTGCCACTGCCCAACCTTCTCCTGATAACCATGGCATGCACCGTCTCCTCTCCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR CCA 90 bp CTGCCAGCAGCCAAACTCTGCAGTGCTAGCCAGCTGGGGTCAGGGAAGAGGGGCACACACCTGGGGTACTaGGGGTGGAAAGGATGGACA +
Preference number: 2 (lower is better)
Translates to: LPAAKLCSASQLGSGKRGTHLGY*GWKGWT
Trigger: TGTCCATCCTTTCCACCCCCAGTACCCCAGGTGTGT...GCCCCTCTTCCCTGACCCCAGCTGGCTAGCACTGCAGAGTTTGGCTGCTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR CCA 90 bp GAGCAGGTGTGGGCCACCCTGCCTTTTCTGCCCCAATCATCTGAGCCACGGCTCCTGGGTATACACACCTaGGGTACTGGGGGTGGAAAG +
Preference number: 2 (lower is better)
Translates to: EQVWATLPFLPQSSEPRLLGIHT*GTGGGK
Trigger: CTTTCCACCCCCAGTACCCCAGGTGTGTATACCCAG...GAGCCGTGGCTCAGATGATTGGGGCAGAAAAGGCAGGGTGGCCCACACCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR CCA 90 bp GAGCAGGTGTGGGCCACCCTGCCTTTTCTGCCCCAATCATCTGAGCCACGGCTCGTCTACCTGTGGGGGTaGGGGAAAGGTGCAGACATA +
Preference number: 2 (lower is better)
Translates to: EQVWATLPFLPQSSEPRLVYLWG*GKGADI
Trigger: TATGTCTGCACCTTTCCCCCACCCCCACAGGTAGAC...GAGCCGTGGCTCAGATGATTGGGGCAGAAAAGGCAGGGTGGCCCACACCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR TCA 90 bp GGGGGTGCCCCACTTCTTGTGCCAATAGGGTGGAGCATTCTGGAATGTCTTGGGGGTCTGCCCCCATTTTaGCAGGCCAAGGATCCTGGG +
Preference number: 2 (lower is better)
Translates to: GGAPLLVPIGWSILECLGGLPPF*QAKDPG
Trigger: CCCAGGATCCTTGGCCTGTCAAAATGGGGGCAGACC...CCCAAGACATTCCAGAATGCTCCACCCTATTGGCACAAGAAGTGGGGCACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR CCA 90 bp GGAGCCCAGATCTCAGGGACCCCTGGACAGACGAACAGTAGAAAAACCCTGGATTGGGGGTGGAAAGGATaGACAGGGACCCAGCGGACT +
Preference number: 2 (lower is better)
Translates to: GAQISGTPGQTNSRKTLDWGWKG*TGTQRT
Trigger: AGTCCGCTGGGTCCCTGTCCATCCTTTCCACCCCCA...ATCCAGGGTTTTTCTACTGTTCGTCTGTCCAGGGGTCCCTGAGATCTGGGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR CCA 90 bp GGAGCCCAGATCTCAGGGACCCCTGGACAGACGAACAGTAGAAAAACCCTGGATCTGGGGTACTGGGGGTaGAAAGGATGGACAGGGACC +
Preference number: 2 (lower is better)
Translates to: GAQISGTPGQTNSRKTLDLGYWG*KGWTGT
Trigger: GGTCCCTGTCCATCCTTTCCACCCCCAGTACCCCAG...ATCCAGGGTTTTTCTACTGTTCGTCTGTCCAGGGGTCCCTGAGATCTGGGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR CCA 90 bp GGGGGTGCCCCACTTCTTGTGCCAATAGGGTGGAGCATTCTGGAATGTCTTGGGACAGGCCAAGGATCCTaGGACCACTTGGGGTTGCAG +
Preference number: 2 (lower is better)
Translates to: GGAPLLVPIGWSILECLGTGQGS*DHLGLQ
Trigger: CTGCAACCCCAAGTGGTCCCAGGATCCTTGGCCTGT...CCCAAGACATTCCAGAATGCTCCACCCTATTGGCACAAGAAGTGGGGCACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR CAA 90 bp GTGGGTGGGTGGGTCCTTTATGCCCAGGTGCCTATCACTGTGCCCTaGAGCTCTAGCAACCCTGGCTGGAGGAGAAATAGGAGTGTCTTC +
Preference number: 2 (lower is better)
Translates to: VGGWVLYAQVPITVP*SSSNPGWRRNRSVF
Trigger: GAAGACACTCCTATTTCTCCTCCAGCCAGGGTTGCTAGAGCTCAAGGGCACAGTGATAGGCACCTGGGCATAAAGGACCCACCCACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR CCA 90 bp GGAGCCCAGATCTCAGGGACCCCTGGACAGACGAACAGTAGAAAAACCCTGGATTGGCAGGATGAGGGGTaGGTGGGTGGGTCCTTTATG +
Preference number: 2 (lower is better)
Translates to: GAQISGTPGQTNSRKTLDWQDEG*VGGSFM
Trigger: CATAAAGGACCCACCCACCCACCCCTCATCCTGCCA...ATCCAGGGTTTTTCTACTGTTCGTCTGTCCAGGGGTCCCTGAGATCTGGGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR TCA 90 bp GTTGAGCATAGGGTGGAAGGGGCTGGGATAGATGGCCATAACAGTATATCTGGGGATGTTGCATGGGACTaGGGAGCCCAGAGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: VEHRVEGAGIDGHNSISGDVAWD*GAQRLQ
Trigger: CTGGAGCCTCTGGGCTCCTCAGTCCCATGCAACATC...CCCAGATATACTGTTATGGCCATCTATCCCAGCCCCTTCCACCCTATGCTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR GCA 90 bp GGGGGTGCCCCACTTCTTGTGCCAATAGGGTGGAGCATTCTGGAATGTCTTGGGAAAAGGACCTCCTGCTaGACATTCAAGTGGGGACCC +
Preference number: 2 (lower is better)
Translates to: GGAPLLVPIGWSILECLGKRTSC*TFKWGP
Trigger: GGGTCCCCACTTGAATGTGCAGCAGGAGGTCCTTTT...CCCAAGACATTCCAGAATGCTCCACCCTATTGGCACAAGAAGTGGGGCACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR GCA 90 bp GTTGAGCATAGGGTGGAAGGGGCTGGGATAGATGGCCATAACAGTATATCTGGGCTAGGCAGGGCCTCCTaGCCTGTGCTGTGTCCTGAT +
Preference number: 2 (lower is better)
Translates to: VEHRVEGAGIDGHNSISGLGRAS*PVLCPD
Trigger: ATCAGGACACAGCACAGGGCAGGAGGCCCTGCCTAG...CCCAGATATACTGTTATGGCCATCTATCCCAGCCCCTTCCACCCTATGCTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR CCA 90 bp AGGCTGAAGCTGGCCAGGCCCCTCCCTCTCCAACCAGGAGAACTAGAATTGGGGTTGCAGTGTATGACCTaGGTATACACACCTGGGGTA +
Preference number: 2 (lower is better)
Translates to: RLKLARPLPLQPGELELGLQCMT*VYTPGV
Trigger: TACCCCAGGTGTGTATACCCAGGTCATACACTGCAA...CCCCAATTCTAGTTCTCCTGGTTGGAGAGGGAGGGGCCTGGCCAGCTTCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR TCA 90 bp TCCCTCCCACTACCCTCACCCCATGTCTACTGTGCAATCTTGTTCTTGCTCCTACTATCACTGTGCCCTTaGGCTCTAGCAACCCTGGCT +
Preference number: 2 (lower is better)
Translates to: SLPLPSPHVYCAILFLLLLSLCP*ALATLA
Trigger: AGCCAGGGTTGCTAGAGCTCAAGGGCACAGTGATAG...TAGGAGCAAGAACAAGATTGCACAGTAGACATGGGGTGAGGGTAGTGGGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR CCA 90 bp TCCCTCCCACTACCCTCACCCCATGTCTACTGTGCAATCTTGTTCTTGCTCCTATGCTGTGTCCTGATCTaGCCCCAGGGAAAGGGAGAA +
Preference number: 2 (lower is better)
Translates to: SLPLPSPHVYCAILFLLLCCVLI*PQGKGE
Trigger: TTCTCCCTTTCCCTGGGGCCAGATCAGGACACAGCA...TAGGAGCAAGAACAAGATTGCACAGTAGACATGGGGTGAGGGTAGTGGGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR GCA 90 bp CCAGGGGCCCTAGAGGGGTCACATCTGATTAACTACAGTCATCATTTAAGATGTCCCCTCCAGCCACACTaGCAGCAGCCAAACTCTGCA +
Preference number: 2 (lower is better)
Translates to: PGALEGSHLINYSHHLRCPLQPH*QQPNSA
Trigger: TGCAGAGTTTGGCTGCTGGCAGTGTGGCTGGAGGGG...ACATCTTAAATGATGACTGTAGTTAATCAGATGTGACCCCTCTAGGGCCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR CAA 90 bp TGCACCTTGTCAGAACCTGAGCTCATGGTGCCTGTATTCTGCCACTaGTCTGTGACAGCTCTTGAGGATATAGCCTCCATTGCTTACCCC +
Preference number: 2 (lower is better)
Translates to: CTLSEPELMVPVFCH*SVTALEDIASIAYP
Trigger: GGGGTAAGCAATGGAGGCTATATCCTCAAGAGCTGTCACAGACAAGTGGCAGAATACAGGCACCATGAGCTCAGGTTCTGACAAGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR GCA 90 bp AGCAGGGTTGAGCATAGGGTGGAAGGGGCTGGGATAGATGGCCATAACAGTATAGGATATAGCCTCCATTaGTTACCCCAACATCTCCCA +
Preference number: 2 (lower is better)
Translates to: SRVEHRVEGAGIDGHNSIGYSLH*LPQHLP
Trigger: TGGGAGATGTTGGGGTAAGCAATGGAGGCTATATCC...TATACTGTTATGGCCATCTATCCCAGCCCCTTCCACCCTATGCTCAACCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR GCA 90 bp CCAGGGGCCCTAGAGGGGTCACATCTGATTAACTACAGTCATCATTTAAGATGTATCTGCCTTAGCCCTTaGCCCTTTCGCAGATCAGGA +
Preference number: 2 (lower is better)
Translates to: PGALEGSHLINYSHHLRCICLSP*PFRRSG
Trigger: TCCTGATCTGCGAAAGGGGCAAGGGCTAAGGCAGAT...ACATCTTAAATGATGACTGTAGTTAATCAGATGTGACCCCTCTAGGGCCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR GCA 90 bp GGAGCCCAGATCTCAGGGACCCCTGGACAGACGAACAGTAGAAAAACCCTGGATATACCTGTGTATATATaGATCACAGGGGCGACATAT +
Preference number: 2 (lower is better)
Translates to: GAQISGTPGQTNSRKTLDIPVYI*ITGATY
Trigger: ATATGTCGCCCCTGTGATGCATATATACACAGGTAT...ATCCAGGGTTTTTCTACTGTTCGTCTGTCCAGGGGTCCCTGAGATCTGGGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR CCA 72 bp GGGTATACACACCTGGGGTACTGGGGGTGGAAAGGATaGACAGGGACCCAGCGGACTGGCGCCTGCCTGATG +
Preference number: 3 (lower is better)
Translates to: GYTHLGYWGWKG*TGTQRTGACLM
Trigger: CATCAGGCAGGCGCCAGTCCGCTGGGTCCCTGTCCATCCTTTCCACCCCCAGTACCCCAGGTGTGTATACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR CAA 90 bp GAGCAGGTGTGGGCCACCCTGCCTTTTCTGCCCCAATCATCTGAGCCACGGCTCCCTGTATTCTGCCACTaGTCTGTGACAGCTCTTGAG +
Preference number: 3 (lower is better)
Translates to: EQVWATLPFLPQSSEPRLPVFCH*SVTALE
Trigger: CTCAAGAGCTGTCACAGACAAGTGGCAGAATACAGG...GAGCCGTGGCTCAGATGATTGGGGCAGAAAAGGCAGGGTGGCCCACACCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR CCA 72 bp CTTGGGGTTGCAGTGTATGACCTGGGTATACACACCTaGGGTACTGGGGGTGGAAAGGATGGACAGGGACCC +
Preference number: 3 (lower is better)
Translates to: LGVAVYDLGIHT*GTGGGKDGQGP
Trigger: GGGTCCCTGTCCATCCTTTCCACCCCCAGTACCCCAGGTGTGTATACCCAGGTCATACACTGCAACCCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR CCA 72 bp TCTTGTGCCAATAGGGTGGAGCATTCTGGAATGTCTTaGGTAGCCAGGGGAGGCTGTGTCTACCTGTGGGGG +
Preference number: 3 (lower is better)
Translates to: SCANRVEHSGMS*VARGGCVYLWG
Trigger: CCCCCACAGGTAGACACAGCCTCCCCTGGCTACCCAAGACATTCCAGAATGCTCCACCCTATTGGCACAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR TCA 72 bp GGGTCCTTTATGCCCAGGTGCCTATCACTGTGCCCTTaGGCTCTAGCAACCCTGGCTGGAGGAGAAATAGGA +
Preference number: 3 (lower is better)
Translates to: GSFMPRCLSLCP*ALATLAGGEIG
Trigger: TCCTATTTCTCCTCCAGCCAGGGTTGCTAGAGCTCAAGGGCACAGTGATAGGCACCTGGGCATAAAGGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR CAA 90 bp GGAGCCCAGATCTCAGGGACCCCTGGACAGACGAACAGTAGAAAAACCCTGGATGCTAAGAAGACCTGCTaGTGTCTCAGCATCCCTTCC +
Preference number: 3 (lower is better)
Translates to: GAQISGTPGQTNSRKTLDAKKTC*CLSIPS
Trigger: GGAAGGGATGCTGAGACACAAGCAGGTCTTCTTAGC...ATCCAGGGTTTTTCTACTGTTCGTCTGTCCAGGGGTCCCTGAGATCTGGGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR TCA 72 bp AGCCCAGAGGCTCCAGCTACTAATGGGTGGGGTCTCTaGCCAATGTTCACATCCCAGTTCTGTACCAGAGAG +
Preference number: 3 (lower is better)
Translates to: SPEAPATNGWGL*PMFTSQFCTRE
Trigger: CTCTCTGGTACAGAACTGGGATGTGAACATTGGTCAGAGACCCCACCCATTAGTAGCTGGAGCCTCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR TCA 72 bp TCAGAGCCTCCCCACGCTTTGCACCTTGTCAGAACCTaGGCTCATGGTGCCTGTATTCTGCCACTTGTCTGT +
Preference number: 3 (lower is better)
Translates to: SEPPHALHLVRT*AHGACILPLVC
Trigger: ACAGACAAGTGGCAGAATACAGGCACCATGAGCTCAGGTTCTGACAAGGTGCAAAGCGTGGGGAGGCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR CAA 90 bp CCAGGGGCCCTAGAGGGGTCACATCTGATTAACTACAGTCATCATTTAAGATGTCAGGTCCCAGGGATGTaGCATGGGACTGAGGAGCCC +
Preference number: 3 (lower is better)
Translates to: PGALEGSHLINYSHHLRCQVPGM*HGTEEP
Trigger: GGGCTCCTCAGTCCCATGCAACATCCCTGGGACCTG...ACATCTTAAATGATGACTGTAGTTAATCAGATGTGACCCCTCTAGGGCCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR-3UTR CAA 90 bp CCAGGGGCCCTAGAGGGGTCACATCTGATTAACTACAGTCATCATTTAAGATGTAGGCAGCCAGCAGGGTaGAGCATAGGGTGGAAGGGG +
Preference number: 3 (lower is better)
Translates to: PGALEGSHLINYSHHLRCRQPAG*SIGWKG
Trigger: CCCCTTCCACCCTATGCTCAACCCTGCTGGCTGCCT...ACATCTTAAATGATGACTGTAGTTAATCAGATGTGACCCCTCTAGGGCCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR TCA 72 bp GGTGCCTGTATTCTGCCACTTGTCTGTGACAGCTCTTaGGGATATAGCCTCCATTGCTTACCCCAACATCTC +
Preference number: 3 (lower is better)
Translates to: GACILPLVCDSS*GYSLHCLPQHL
Trigger: GAGATGTTGGGGTAAGCAATGGAGGCTATATCCTCAAGAGCTGTCACAGACAAGTGGCAGAATACAGGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR GCA 72 bp ACCTTGTCAGAACCTGAGCTCATGGTGCCTGTATTCTaGCACTTGTCTGTGACAGCTCTTGAGGATATAGCC +
Preference number: 3 (lower is better)
Translates to: TLSEPELMVPVF*HLSVTALEDIA
Trigger: GGCTATATCCTCAAGAGCTGTCACAGACAAGTGGCAGAATACAGGCACCATGAGCTCAGGTTCTGACAAGGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR CCA 72 bp CCTATCACTGTGCCCTTGAGCTCTAGCAACCCTGGCTaGAGGAGAAATAGGAGTGTCTTCATTCTATCTCAC +
Preference number: 3 (lower is better)
Translates to: PITVPLSSSNPG*RRNRSVFILSH
Trigger: GTGAGATAGAATGAAGACACTCCTATTTCTCCTCCAGCCAGGGTTGCTAGAGCTCAAGGGCACAGTGATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR CCA 72 bp CAGGGACCCCTGGACAGACGAACAGTAGAAAAACCCTaGATTCATTCTTCTTTGGTGGGAAACAAACACGAA +
Preference number: 3 (lower is better)
Translates to: QGPLDRRTVEKP*IHSSLVGNKHE
Trigger: TTCGTGTTTGTTTCCCACCAAAGAAGAATGAATCCAGGGTTTTTCTACTGTTCGTCTGTCCAGGGGTCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR GCA 72 bp TATATACACACTAAAACAAGGCTGGTGACAACAGACTaGAACACCACGGGTCAGGAGAACAAGTGTCATCCA +
Preference number: 3 (lower is better)
Translates to: YIHTKTRLVTTD*NTTGQENKCHP
Trigger: TGGATGACACTTGTTCTCCTGACCCGTGGTGTTGCAGTCTGTTGTCACCAGCCTTGTTTTAGTGTGTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR TCA 72 bp TTGGTGGGAAACAAACACGAAATGACTTCCTTTTCCTaGGCACACTGGTATTCTAGACATGGATCTGTGGGA +
Preference number: 3 (lower is better)
Translates to: LVGNKHEMTSFS*AHWYSRHGSVG
Trigger: TCCCACAGATCCATGTCTAGAATACCAGTGTGCTCAGGAAAAGGAAGTCATTTCGTGTTTGTTTCCCACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR TCA 72 bp GGATTCATTCTTCTTTGGTGGGAAACAAACACGAAATaGCTTCCTTTTCCTGAGCACACTGGTATTCTAGAC +
Preference number: 3 (lower is better)
Translates to: GFILLWWETNTK*LPFPEHTGILD
Trigger: GTCTAGAATACCAGTGTGCTCAGGAAAAGGAAGTCATTTCGTGTTTGTTTCCCACCAAAGAAGAATGAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR TCA 90 bp GTACTGGGGGTGGAAAGGATGGACAGGGACCCAGCGGACTGGCGCCTGCCTGATCTCCTTCCCGAGAGCTaGTGGGGGTCCCTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: VLGVERMDRDPADWRLPDLLPES*WGSLLP
Trigger: CGGGAGAAGGGACCCCCATCAGCTCTCGGGAAGGAG...ATCAGGCAGGCGCCAGTCCGCTGGGTCCCTGTCCATCCTTTCCACCCCCAGTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp GAGCAGGTGTGGGCCACCCTGCCTTTTCTGCCCCAATCATCTGAGCCACGGCTCCACCCAAGCCGCTGCTaGCCTTCCCTGCGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: EQVWATLPFLPQSSEPRLHPSRC*PSLRGL
Trigger: AAGCCCACGCAGGGAAGGCCAGCAGCGGCTTGGGTG...GAGCCGTGGCTCAGATGATTGGGGCAGAAAAGGCAGGGTGGCCCACACCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR TCA 90 bp GAGCAGGTGTGGGCCACCCTGCCTTTTCTGCCCCAATCATCTGAGCCACGGCTCACTGGCAGGCCTGCTTaGACTCGTGGGTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: EQVWATLPFLPQSSEPRLTGRPA*TRGWQP
Trigger: TGGCTGCCACCCACGAGTTCAAGCAGGCCTGCCAGT...GAGCCGTGGCTCAGATGATTGGGGCAGAAAAGGCAGGGTGGCCCACACCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp GCCACACTGCCAGCAGCCAAACTCTGCAGTGCTAGCCAGCTGGGGTCAGGGAAGGGAGTGTCCTGCTGCTaGCATCCAGTGGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: ATLPAAKLCSASQLGSGKGVSCC*HPVGPG
Trigger: TCCTGGCCCCACTGGATGGCAGCAGCAGGACACTCC...CTTCCCTGACCCCAGCTGGCTAGCACTGCAGAGTTTGGCTGCTGGCAGTGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp GGTCTACAACTGTGGCTCACAAAGGAGAGGCCCGGGCAGGGGGTGGTTGTTAGGTGCCGGGGAGTGTCCTaGTGCTGCCATCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GLQLWLTKERPGQGVVVRCRGVS*CCHPVG
Trigger: CCCCACTGGATGGCAGCAGCAGGACACTCCCCGGCA...CCTAACAACCACCCCCTGCCCGGGCCTCTCCTTTGTGAGCCACAGTTGTAGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp CTGCCAGCAGCCAAACTCTGCAGTGCTAGCCAGCTGGGGTCAGGGAAGAGGGGCGCTGCTGGCCTTCCCTaGGTGGGCTTCCATCTGTTG +
Preference number: 4 (lower is better)
Translates to: LPAAKLCSASQLGSGKRGAAGLP*VGFHLL
Trigger: CAACAGATGGAAGCCCACGCAGGGAAGGCCAGCAGC...GCCCCTCTTCCCTGACCCCAGCTGGCTAGCACTGCAGAGTTTGGCTGCTGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR TCA 90 bp CTGCCAGCAGCCAAACTCTGCAGTGCTAGCCAGCTGGGGTCAGGGAAGAGGGGCCCTGGCCCAGCTGGGTaGCATTTTCATCGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: LPAAKLCSASQLGSGKRGPGPAG*HFHRGE
Trigger: TTCCCCACGATGAAAATGTCACCCAGCTGGGCCAGG...GCCCCTCTTCCCTGACCCCAGCTGGCTAGCACTGCAGAGTTTGGCTGCTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp GAAGAGGGGCAGGGGAGAGGAGACGGTGCATGCCATGGTTATCAGGAGAAGGTTGGAGGGGAGCAGGGCTaGGGAGCCTCGGAGATCCAC +
Preference number: 4 (lower is better)
Translates to: EEGQGRGDGACHGYQEKVGGEQG*GASEIH
Trigger: GTGGATCTCCGAGGCTCCCCAGCCCTGCTCCCCTCC...AACCTTCTCCTGATAACCATGGCATGCACCGTCTCCTCTCCCCTGCCCCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp GGTCTACAACTGTGGCTCACAAAGGAGAGGCCCGGGCAGGGGGTGGTTGTTAGGCCAGGCAGGCCACCCTaGACCAGAGACAGAGAGTCC +
Preference number: 4 (lower is better)
Translates to: GLQLWLTKERPGQGVVVRPGRPP*TRDRES
Trigger: GGACTCTCTGTCTCTGGTCCAGGGTGGCCTGCCTGG...CCTAACAACCACCCCCTGCCCGGGCCTCTCCTTTGTGAGCCACAGTTGTAGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR TCA 90 bp GTACTGGGGGTGGAAAGGATGGACAGGGACCCAGCGGACTGGCGCCTGCCTGATTCTCACAGAGGAAGGTaGAGATGCCCTGGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: VLGVERMDRDPADWRLPDSHRGR*RCPGAP
Trigger: AGGAGCACCAGGGCATCTTCACCTTCCTCTGTGAGA...ATCAGGCAGGCGCCAGTCCGCTGGGTCCCTGTCCATCCTTTCCACCCCCAGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp GTACTGGGGGTGGAAAGGATGGACAGGGACCCAGCGGACTGGCGCCTGCCTGATGTGGAGCGGACGATGTaGACCAGGCACTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: VLGVERMDRDPADWRLPDVERTM*TRHLLL
Trigger: CAACAACAAGTGCCTGGTGCACATCGTCCGCTCCAC...ATCAGGCAGGCGCCAGTCCGCTGGGTCCCTGTCCATCCTTTCCACCCCCAGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp GAGCAGGTGTGGGCCACCCTGCCTTTTCTGCCCCAATCATCTGAGCCACGGCTCCTTCTGAGTACTGCTTaGGGGTCGGTGGTCCTGCGA +
Preference number: 4 (lower is better)
Translates to: EQVWATLPFLPQSSEPRLLLSTA*GSVVLR
Trigger: TCGCAGGACCACCGACCCCCAAGCAGTACTCAGAAG...GAGCCGTGGCTCAGATGATTGGGGCAGAAAAGGCAGGGTGGCCCACACCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp CTGCCAGCAGCCAAACTCTGCAGTGCTAGCCAGCTGGGGTCAGGGAAGAGGGGCATGCGCTTCCAGATCTaGTTCTCGGAACTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: LPAAKLCSASQLGSGKRGMRFQI*FSELRR
Trigger: CCTCCGGAGTTCCGAGAACCAGATCTGGAAGCGCAT...GCCCCTCTTCCCTGACCCCAGCTGGCTAGCACTGCAGAGTTTGGCTGCTGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp GGCCAGGCCCCTCCCTCTCCAACCAGGAGAACTAGAATTGGGGAGGGTCTGCCCCAGTTCCCCACATACTaGCATTTGCGGCCGTTCTGG +
Preference number: 4 (lower is better)
Translates to: GQAPPSPTRRTRIGEGLPQFPTY*HLRPFW
Trigger: CCAGAACGGCCGCAAATGCCAGTATGTGGGGAACTG...GGGCAGACCCTCCCCAATTCTAGTTCTCCTGGTTGGAGAGGGAGGGGCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR TCA 90 bp CTGCCAGCAGCCAAACTCTGCAGTGCTAGCCAGCTGGGGTCAGGGAAGAGGGGCGTAGTGTTGACTGGATaGACTGCAGCCCCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: LPAAKLCSASQLGSGKRGVVLTG*TAAPSR
Trigger: TCGAGAAGGGGCTGCAGTTCATCCAGTCAACACTAC...GCCCCTCTTCCCTGACCCCAGCTGGCTAGCACTGCAGAGTTTGGCTGCTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR TCA 90 bp GGTCTACAACTGTGGCTCACAAAGGAGAGGCCCGGGCAGGGGGTGGTTGTTAGGCATACAGGCCCATGGTaGAGTAGCAGGCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: GLQLWLTKERPGQGVVVRHTGPW*SSRLPC
Trigger: ACAGGGCAGCCTGCTACTTCACCATGGGCCTGTATG...CCTAACAACCACCCCCTGCCCGGGCCTCTCCTTTGTGAGCCACAGTTGTAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp GCCACACTGCCAGCAGCCAAACTCTGCAGTGCTAGCCAGCTGGGGTCAGGGAAGGCTGCCCTGTTGACATaGAGTTTGCACAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ATLPAAKLCSASQLGSGKAALLT*SLHSSS
Trigger: GGAGCTGCTGTGCAAACTGCATGTCAACAGGGCAGC...CTTCCCTGACCCCAGCTGGCTAGCACTGCAGAGTTTGGCTGCTGGCAGTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp AGGCTGAAGCTGGCCAGGCCCCTCCCTCTCCAACCAGGAGAACTAGAATTGGGGCACAACTGGCAGGCCTaGTTGAACTCGTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: RLKLARPLPLQPGELELGHNWQA*LNSWVA
Trigger: TGCCACCCACGAGTTCAAGCAGGCCTGCCAGTTGTG...CCCCAATTCTAGTTCTCCTGGTTGGAGAGGGAGGGGCCTGGCCAGCTTCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp GTACTGGGGGTGGAAAGGATGGACAGGGACCCAGCGGACTGGCGCCTGCCTGATGCTGCCACTGTTTCTTaGTGTTGCTGTTCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: VLGVERMDRDPADWRLPDAATVS*CCCSCR
Trigger: GCGGCAAGAACAGCAACAGCAAGAAACAGTGGCAGC...ATCAGGCAGGCGCCAGTCCGCTGGGTCCCTGTCCATCCTTTCCACCCCCAGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp AGCAGGGTTGAGCATAGGGTGGAAGGGGCTGGGATAGATGGCCATAACAGTATAGGGGCATCGTGGGAGTaGAGGGGAGCAGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SRVEHRVEGAGIDGHNSIGASWE*RGAGLG
Trigger: CCCCAGCCCTGCTCCCCTCCACTCCCACGATGCCCC...TATACTGTTATGGCCATCTATCCCAGCCCCTTCCACCCTATGCTCAACCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp AGGCTGAAGCTGGCCAGGCCCCTCCCTCTCCAACCAGGAGAACTAGAATTGGGGAAACTATGGGCGAAGTaGCAGCTGTCCTCGCGCAGG +
Preference number: 4 (lower is better)
Translates to: RLKLARPLPLQPGELELGKLWAK*QLSSRR
Trigger: CCTGCGCGAGGACAGCTGCCACTTCGCCCATAGTTT...CCCCAATTCTAGTTCTCCTGGTTGGAGAGGGAGGGGCCTGGCCAGCTTCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR TCA 90 bp GTACTGGGGGTGGAAAGGATGGACAGGGACCCAGCGGACTGGCGCCTGCCTGATTTCATGGGTCATTCCTaGGTACTGCTGCAGCAACCA +
Preference number: 4 (lower is better)
Translates to: VLGVERMDRDPADWRLPDFMGHS*VLLQQP
Trigger: TGGTTGCTGCAGCAGTACTCAGGAATGACCCATGAA...ATCAGGCAGGCGCCAGTCCGCTGGGTCCCTGTCCATCCTTTCCACCCCCAGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp GCCACACTGCCAGCAGCCAAACTCTGCAGTGCTAGCCAGCTGGGGTCAGGGAAGGAGGGTGTCCAGTTCTaGACCAAACACATCCCCATC +
Preference number: 4 (lower is better)
Translates to: ATLPAAKLCSASQLGSGKEGVQF*TKHIPI
Trigger: GATGGGGATGTGTTTGGTCCAGAACTGGACACCCTC...CTTCCCTGACCCCAGCTGGCTAGCACTGCAGAGTTTGGCTGCTGGCAGTGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp AGCAGGGTTGAGCATAGGGTGGAAGGGGCTGGGATAGATGGCCATAACAGTATACCAGGGGGTCCAGCGTaGGCCCTGGAGAGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: SRVEHRVEGAGIDGHNSIPGGPA*ALESQG
Trigger: CCCTTGACTCTCCAGGGCCCACGCTGGACCCCCTGG...TATACTGTTATGGCCATCTATCCCAGCCCCTTCCACCCTATGCTCAACCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp GAGCAGGTGTGGGCCACCCTGCCTTTTCTGCCCCAATCATCTGAGCCACGGCTCAAGGTGAAGATGCCCTaGTGCTCCTTCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: EQVWATLPFLPQSSEPRLKVKMP*CSFRSL
Trigger: CAAGCTCCTGAAGGAGCACCAGGGCATCTTCACCTT...GAGCCGTGGCTCAGATGATTGGGGCAGAAAAGGCAGGGTGGCCCACACCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp GGCCAGGCCCCTCCCTCTCCAACCAGGAGAACTAGAATTGGGGAGGGTCTGCCCATTTCCTCTTGGCCTTaGACATCACCAGAAGGACCC +
Preference number: 4 (lower is better)
Translates to: GQAPPSPTRRTRIGEGLPISSWP*TSPEGP
Trigger: GGGTCCTTCTGGTGATGTCCAAGGCCAAGAGGAAAT...GGGCAGACCCTCCCCAATTCTAGTTCTCCTGGTTGGAGAGGGAGGGGCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR TCA 90 bp GAGCAGGTGTGGGCCACCCTGCCTTTTCTGCCCCAATCATCTGAGCCACGGCTCAAGTGCTCCTGGAACTaGCGGATCTTGGAGTACTTG +
Preference number: 4 (lower is better)
Translates to: EQVWATLPFLPQSSEPRLKCSWN*RILEYL
Trigger: CAAGTACTCCAAGATCCGTCAGTTCCAGGAGCACTT...GAGCCGTGGCTCAGATGATTGGGGCAGAAAAGGCAGGGTGGCCCACACCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR TCA 90 bp GAAGAGGGGCAGGGGAGAGGAGACGGTGCATGCCATGGTTATCAGGAGAAGGTTGGTCCAGCCACTCGTTaGGTTCCTCTTGTCCATGGG +
Preference number: 4 (lower is better)
Translates to: EEGQGRGDGACHGYQEKVGPATR*VPLVHG
Trigger: CCCATGGACAAGAGGAACTCAACGAGTGGCTGGACC...AACCTTCTCCTGATAACCATGGCATGCACCGTCTCCTCTCCCCTGCCCCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp AGGCTGAAGCTGGCCAGGCCCCTCCCTCTCCAACCAGGAGAACTAGAATTGGGGGTTGACTGGATGAACTaGAGCCCCTTCTCGATGTCC +
Preference number: 4 (lower is better)
Translates to: RLKLARPLPLQPGELELGVDWMN*SPFSMS
Trigger: GGACATCGAGAAGGGGCTGCAGTTCATCCAGTCAAC...CCCCAATTCTAGTTCTCCTGGTTGGAGAGGGAGGGGCCTGGCCAGCTTCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp GTTGAGCATAGGGTGGAAGGGGCTGGGATAGATGGCCATAACAGTATATCTGGGCGGGGAGTGTCCTGCTaGTGCCATCCAGTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: VEHRVEGAGIDGHNSISGRGVSC*CHPVGP
Trigger: TGGCCCCACTGGATGGCAGCAGCAGGACACTCCCCG...CCCAGATATACTGTTATGGCCATCTATCCCAGCCCCTTCCACCCTATGCTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp GCCACACTGCCAGCAGCCAAACTCTGCAGTGCTAGCCAGCTGGGGTCAGGGAAGGATGGTAGGCGAAGGTaGAGTTATCCCCGTACTTAC +
Preference number: 4 (lower is better)
Translates to: ATLPAAKLCSASQLGSGKDGRRR*SYPRTY
Trigger: GTAAGTACGGGGATAACTGCACCTTCGCCTACCATC...CTTCCCTGACCCCAGCTGGCTAGCACTGCAGAGTTTGGCTGCTGGCAGTGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp GTTGAGCATAGGGTGGAAGGGGCTGGGATAGATGGCCATAACAGTATATCTGGGGGAACAGGGGCATCGTaGGAGTGGAGGGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VEHRVEGAGIDGHNSISGGTGAS*EWRGAG
Trigger: CCCTGCTCCCCTCCACTCCCACGATGCCCCTGTTCC...CCCAGATATACTGTTATGGCCATCTATCCCAGCCCCTTCCACCCTATGCTCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp GAAGAGGGGCAGGGGAGAGGAGACGGTGCATGCCATGGTTATCAGGAGAAGGTTCACAGGTGGCAAGAGTaGGGTCCCACCAGGAAACAC +
Preference number: 4 (lower is better)
Translates to: EEGQGRGDGACHGYQEKVHRWQE*GPTRKH
Trigger: GTGTTTCCTGGTGGGACCCCACTCTTGCCACCTGTG...AACCTTCTCCTGATAACCATGGCATGCACCGTCTCCTCTCCCCTGCCCCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp TCCCTCCCACTACCCTCACCCCATGTCTACTGTGCAATCTTGTTCTTGCTCCTAGCCACCCACCACAGGTaGCAAGAGTGGGGTCCCACC +
Preference number: 4 (lower is better)
Translates to: SLPLPSPHVYCAILFLLLATHHR*QEWGPT
Trigger: GGTGGGACCCCACTCTTGCCACCTGTGGTGGGTGGC...TAGGAGCAAGAACAAGATTGCACAGTAGACATGGGGTGAGGGTAGTGGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp GTTGAGCATAGGGTGGAAGGGGCTGGGATAGATGGCCATAACAGTATATCTGGGGGCTGGACACGGGGATaGAGCCACCCACCACAGGTG +
Preference number: 4 (lower is better)
Translates to: VEHRVEGAGIDGHNSISGGWTRG*SHPPQV
Trigger: CACCTGTGGTGGGTGGCTCCATCCCCGTGTCCAGCC...CCCAGATATACTGTTATGGCCATCTATCCCAGCCCCTTCCACCCTATGCTCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp TCCCTCCCACTACCCTCACCCCATGTCTACTGTGCAATCTTGTTCTTGCTCCTAGGACCCGCCTCTCCTTaGTCCAGCAATGCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: SLPLPSPHVYCAILFLLLGPASP*SSNAGP
Trigger: AGGCCCGGCATTGCTGGACCAAGGAGAGGCGGGTCC...TAGGAGCAAGAACAAGATTGCACAGTAGACATGGGGTGAGGGTAGTGGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp GGAGCCCAGATCTCAGGGACCCCTGGACAGACGAACAGTAGAAAAACCCTGGATCAGGCCTTGCCCTTCTaGAGCCTGTCACAGAGTCGG +
Preference number: 4 (lower is better)
Translates to: GAQISGTPGQTNSRKTLDQALPF*SLSQSR
Trigger: CCGACTCTGTGACAGGCTCCAGAAGGGCAAGGCCTG...ATCCAGGGTTTTTCTACTGTTCGTCTGTCCAGGGGTCCCTGAGATCTGGGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR TCA 90 bp GTTGAGCATAGGGTGGAAGGGGCTGGGATAGATGGCCATAACAGTATATCTGGGAGAGCAGGTCCCGGTTaGGTGTGCCCTTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: VEHRVEGAGIDGHNSISGRAGPG*VCPSAP
Trigger: AGGAGCGGAAGGGCACACTCAACCGGGACCTGCTCT...CCCAGATATACTGTTATGGCCATCTATCCCAGCCCCTTCCACCCTATGCTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp GGGGGTGCCCCACTTCTTGTGCCAATAGGGTGGAGCATTCTGGAATGTCTTGGGGGGAGCACCGGCTGCTaGATTCATAGGCCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: GGAPLLVPIGWSILECLGGSTGC*IHRPLC
Trigger: ACAAAGAGGCCTATGAATGCAGCAGCCGGTGCTCCC...CCCAAGACATTCCAGAATGCTCCACCCTATTGGCACAAGAAGTGGGGCACCCCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp AGCAGGGTTGAGCATAGGGTGGAAGGGGCTGGGATAGATGGCCATAACAGTATATGGGCCGCGGCCGGATaGGCTTCCAGATCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: SRVEHRVEGAGIDGHNSIWAAAG*ASRSGS
Trigger: AGAACCAGATCTGGAAGCGCATCCGGCCGCGGCCCA...TATACTGTTATGGCCATCTATCCCAGCCCCTTCCACCCTATGCTCAACCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp GAAGAGGGGCAGGGGAGAGGAGACGGTGCATGCCATGGTTATCAGGAGAAGGTTTGCTGTTGCTGTTCTTaGCGCAGAGCCAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: EEGQGRGDGACHGYQEKVCCCCS*RRASSG
Trigger: ACCACTGCTGGCTCTGCGGCAAGAACAGCAACAGCA...AACCTTCTCCTGATAACCATGGCATGCACCGTCTCCTCTCCCCTGCCCCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp AGCAGGGTTGAGCATAGGGTGGAAGGGGCTGGGATAGATGGCCATAACAGTATACGTCTGGGCAGGCCTTaGCCTTCTGGAGCCTGTCAC +
Preference number: 4 (lower is better)
Translates to: SRVEHRVEGAGIDGHNSIRLGRP*PSGACH
Trigger: GTGACAGGCTCCAGAAGGGCAAGGCCTGCCCAGACG...TATACTGTTATGGCCATCTATCCCAGCCCCTTCCACCCTATGCTCAACCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp AGGCTGAAGCTGGCCAGGCCCCTCCCTCTCCAACCAGGAGAACTAGAATTGGGGACAGAAGCATGTCCTTaGGGGCCTTGGCAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: RLKLARPLPLQPGELELGTEACP*GPWQAF
Trigger: AAAAGCTTGCCAAGGCCCGCAAGGACATGCTTCTGT...CCCCAATTCTAGTTCTCCTGGTTGGAGAGGGAGGGGCCTGGCCAGCTTCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp AGGCTGAAGCTGGCCAGGCCCCTCCCTCTCCAACCAGGAGAACTAGAATTGGGGAGTTCCTCTTGTCCATaGGCACAACGGCACTTGTCT +
Preference number: 4 (lower is better)
Translates to: RLKLARPLPLQPGELELGSSSCP*AQRHLS
Trigger: AGACAAGTGCCGTTGTGCCCATGGACAAGAGGAACT...CCCCAATTCTAGTTCTCCTGGTTGGAGAGGGAGGGGCCTGGCCAGCTTCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp GAGCAGGTGTGGGCCACCCTGCCTTTTCTGCCCCAATCATCTGAGCCACGGCTCGAAGTCATCATCCCGTaGACACAGAAGCATGTCCTT +
Preference number: 4 (lower is better)
Translates to: EQVWATLPFLPQSSEPRLEVIIP*TQKHVL
Trigger: AAGGACATGCTTCTGTGTCCACGGGATGATGACTTC...GAGCCGTGGCTCAGATGATTGGGGCAGAAAAGGCAGGGTGGCCCACACCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR CAA 72 bp CTCCCACTACCCTCACCCCATGTCTACTGTGCAATCTaGTTCTTGCTCCTAGGCCCCGCTTCAACCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LPLPSPHVYCAI*FLLLGPASTLS
Trigger: GCTCAGGGTTGAAGCGGGGCCTAGGAGCAAGAACAAGATTGCACAGTAGACATGGGGTGAGGGTAGTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp TCCCTCCCACTACCCTCACCCCATGTCTACTGTGCAATCTTGTTCTTGCTCCTACGCCTTGCGGAACAGTaGCCGGATACTCTCGCCATC +
Preference number: 4 (lower is better)
Translates to: SLPLPSPHVYCAILFLLLRLAEQ*PDTLAI
Trigger: GATGGCGAGAGTATCCGGGCACTGTTCCGCAAGGCG...TAGGAGCAAGAACAAGATTGCACAGTAGACATGGGGTGAGGGTAGTGGGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp AGCAGGGTTGAGCATAGGGTGGAAGGGGCTGGGATAGATGGCCATAACAGTATACTGGCCTTCCCTGCGTaGGCTTCCATCTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: SRVEHRVEGAGIDGHNSILAFPA*ASICCQ
Trigger: CTGGCAACAGATGGAAGCCCACGCAGGGAAGGCCAG...TATACTGTTATGGCCATCTATCCCAGCCCCTTCCACCCTATGCTCAACCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp TCCCTCCCACTACCCTCACCCCATGTCTACTGTGCAATCTTGTTCTTGCTCCTAGCACTTGTCTCCGTCTaGGCAGGCCTTGCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SLPLPSPHVYCAILFLLLALVSV*AGLALL
Trigger: CAGAAGGGCAAGGCCTGCCCAGACGGAGACAAGTGC...TAGGAGCAAGAACAAGATTGCACAGTAGACATGGGGTGAGGGTAGTGGGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp GTGGAGCATTCTGGAATGTCTTGGGTAGCCAGGGGAGGCTGTGTCTACCTGTGGTGTCCTTGCGGGCCTTaGCAAGCTTTTGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: VEHSGMSWVARGGCVYLWCPCGP*QAFASA
Trigger: TGCTGAAGCAAAAGCTTGCCAAGGCCCGCAAGGACA...CCACAGGTAGACACAGCCTCCCCTGGCTACCCAAGACATTCCAGAATGCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR CAA 72 bp TGGGTCCTTTATGCCCAGGTGCCTATCACTGTGCCCTaGAGCTCTAGCAACCCTGGCTGGAGGAGAAATAGG +
Preference number: 4 (lower is better)
Translates to: WVLYAQVPITVP*SSSNPGWRRNR
Trigger: CCTATTTCTCCTCCAGCCAGGGTTGCTAGAGCTCAAGGGCACAGTGATAGGCACCTGGGCATAAAGGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR TCA 90 bp GGGTGGGGGAAAGGTGCAGACATACTTCAGAAGATAAAAGAGGCCTTGGTAAAAGAGGGGGCTGGCTTCTaGGTACTGCTTGGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: GWGKGADILQKIKEALVKEGAGF*VLLGGR
Trigger: CCGACCCCCAAGCAGTACTCAGAAGCCAGCCCCCTC...TTTTACCAAGGCCTCTTTTATCTTCTGAAGTATGTCTGCACCTTTCCCCCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR TCA 90 bp GAAGAGGGGCAGGGGAGAGGAGACGGTGCATGCCATGGTTATCAGGAGAAGGTTTTGTGCTTCTCAGACTaGATGTGCTGCTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: EEGQGRGDGACHGYQEKVLCFSD*MCCCHC
Trigger: ACAGTGGCAGCAGCACATTCAGTCTGAGAAGCACAA...AACCTTCTCCTGATAACCATGGCATGCACCGTCTCCTCTCCCCTGCCCCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp GGAGCCCAGATCTCAGGGACCCCTGGACAGACGAACAGTAGAAAAACCCTGGATTCTGCAGGTCAAAAGTaGTGGGTCCGTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: GAQISGTPGQTNSRKTLDSAGQK*WVRVSL
Trigger: CAAGGACACACGGACCCAGCACTTTTGACCTGCAGA...ATCCAGGGTTTTTCTACTGTTCGTCTGTCCAGGGGTCCCTGAGATCTGGGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp GTTGAGCATAGGGTGGAAGGGGCTGGGATAGATGGCCATAACAGTATATCTGGGGCCTTGGCAAGCTTTTaGTTCAGCACCTCACGCCGG +
Preference number: 4 (lower is better)
Translates to: VEHRVEGAGIDGHNSISGALASF*FSTSRR
Trigger: CCGGCGTGAGGTGCTGAAGCAAAAGCTTGCCAAGGC...CCCAGATATACTGTTATGGCCATCTATCCCAGCCCCTTCCACCCTATGCTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp GGGGGTGCCCCACTTCTTGTGCCAATAGGGTGGAGCATTCTGGAATGTCTTGGGGTTGGAGCAGACAGATaGAGAGTCCTTGGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: GGAPLLVPIGWSILECLGVGADR*RVLGPF
Trigger: AAAGGGACCAAGGACTCTCCATCTGTCTGCTCCAAC...CCCAAGACATTCCAGAATGCTCCACCCTATTGGCACAAGAAGTGGGGCACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp GGGTGGGGGAAAGGTGCAGACATACTTCAGAAGATAAAAGAGGCCTTGGTAAAAGTCGGAACTCGCCCATaGGGAAGCGGTAGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GWGKGADILQKIKEALVKVGTRP*GSGRPS
Trigger: GCTGGGCCTACCGCTTCCCCATGGGCGAGTTCCGAC...TTTTACCAAGGCCTCTTTTATCTTCTGAAGTATGTCTGCACCTTTCCCCCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR TCA 90 bp AGCAGGGTTGAGCATAGGGTGGAAGGGGCTGGGATAGATGGCCATAACAGTATAAACACGGGGATCAGCTaGGGCAGCTCACTAGGCATA +
Preference number: 4 (lower is better)
Translates to: SRVEHRVEGAGIDGHNSINTGIS*GSSLGI
Trigger: TATGCCTAGTGAGCTGCCTCAGCTGATCCCCGTGTT...TATACTGTTATGGCCATCTATCCCAGCCCCTTCCACCCTATGCTCAACCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp GGAGCCCAGATCTCAGGGACCCCTGGACAGACGAACAGTAGAAAAACCCTGGATATTCCTGAGTACTGCTaGAGCAACCAGACCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GAQISGTPGQTNSRKTLDIPEYC*SNQTLS
Trigger: GCTCAAGGTCTGGTTGCTGCAGCAGTACTCAGGAAT...ATCCAGGGTTTTTCTACTGTTCGTCTGTCCAGGGGTCCCTGAGATCTGGGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp CCAGGGGCCCTAGAGGGGTCACATCTGATTAACTACAGTCATCATTTAAGATGTCCACAAAGCTGGTTTTaGTGGGCCGCGGCCGGATGC +
Preference number: 4 (lower is better)
Translates to: PGALEGSHLINYSHHLRCPQSWF*WAAAGC
Trigger: GCATCCGGCCGCGGCCCACCAAAACCAGCTTTGTGG...ACATCTTAAATGATGACTGTAGTTAATCAGATGTGACCCCTCTAGGGCCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp CCAGGGGCCCTAGAGGGGTCACATCTGATTAACTACAGTCATCATTTAAGATGTCTGGGGTGGCACCAGTaGTGTCCCCGTCCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: PGALEGSHLINYSHHLRCLGWHQ*CPRPLA
Trigger: TGCAAGAGGACGGGGACACCACTGGTGCCACCCCAG...ACATCTTAAATGATGACTGTAGTTAATCAGATGTGACCCCTCTAGGGCCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR CAA 72 bp CTTCATATTCCTCAGAGCCTCCCCACGCTTTGCACCTaGTCAGAACCTGAGCTCATGGTGCCTGTATTCTGC +
Preference number: 4 (lower is better)
Translates to: LHIPQSLPTLCT*SEPELMVPVFC
Trigger: GCAGAATACAGGCACCATGAGCTCAGGTTCTGACAAGGTGCAAAGCGTGGGGAGGCTCTGAGGAATATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp GGGTGGGGGAAAGGTGCAGACATACTTCAGAAGATAAAAGAGGCCTTGGTAAAAGCCTGCTTGAACTCGTaGGTGGCAGCCAGAGGGTTC +
Preference number: 4 (lower is better)
Translates to: GWGKGADILQKIKEALVKACLNS*VAARGF
Trigger: GAACCCTCTGGCTGCCACCCACGAGTTCAAGCAGGC...TTTTACCAAGGCCTCTTTTATCTTCTGAAGTATGTCTGCACCTTTCCCCCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp GGGTGGGGGAAAGGTGCAGACATACTTCAGAAGATAAAAGAGGCCTTGGTAAAAAGCAACAGGGGCATCTaGGGTGGCACCAGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: GWGKGADILQKIKEALVKSNRGI*GGTSGV
Trigger: GACACCACTGGTGCCACCCCAGATGCCCCTGTTGCT...TTTTACCAAGGCCTCTTTTATCTTCTGAAGTATGTCTGCACCTTTCCCCCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR TCA 90 bp AGCAGGGTTGAGCATAGGGTGGAAGGGGCTGGGATAGATGGCCATAACAGTATACCATTCCTCCAACACTaGCCGCACACAAACTTCATC +
Preference number: 4 (lower is better)
Translates to: SRVEHRVEGAGIDGHNSIPFLQH*PHTNFI
Trigger: GATGAAGTTTGTGTGCGGTCAGTGTTGGAGGAATGG...TATACTGTTATGGCCATCTATCCCAGCCCCTTCCACCCTATGCTCAACCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp GTTGAGCATAGGGTGGAAGGGGCTGGGATAGATGGCCATAACAGTATATCTGGGGCCTCATACTCCTCTTaGTTCAGGGGTAGTGTTGAC +
Preference number: 4 (lower is better)
Translates to: VEHRVEGAGIDGHNSISGASYSS*FRGSVD
Trigger: GTCAACACTACCCCTGAAGCAAGAGGAGTATGAGGC...CCCAGATATACTGTTATGGCCATCTATCCCAGCCCCTTCCACCCTATGCTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp GGGTGGGGGAAAGGTGCAGACATACTTCAGAAGATAAAAGAGGCCTTGGTAAAACTGGCTTCTGAGTACTaGTTGGGGGTCGGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: GWGKGADILQKIKEALVKLASEY*LGVGGP
Trigger: AGGACCACCGACCCCCAAGCAGTACTCAGAAGCCAG...TTTTACCAAGGCCTCTTTTATCTTCTGAAGTATGTCTGCACCTTTCCCCCACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp TCCCTCCCACTACCCTCACCCCATGTCTACTGTGCAATCTTGTTCTTGCTCCTATGTAAAAGCTGTGCTTaGCAGCCAGGTTGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: SLPLPSPHVYCAILFLLLCKSCA*QPGWSR
Trigger: TCTGCTCCAACCTGGCTGCCAAGCACAGCTTTTACA...TAGGAGCAAGAACAAGATTGCACAGTAGACATGGGGTGAGGGTAGTGGGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR TCA 90 bp GGGTGGGGGAAAGGTGCAGACATACTTCAGAAGATAAAAGAGGCCTTGGTAAAAGGATCTTGGAGTACTTaGGAGAGGTGGAGCGGACGA +
Preference number: 4 (lower is better)
Translates to: GWGKGADILQKIKEALVKGSWST*ERWSGR
Trigger: TCGTCCGCTCCACCTCTCTCAAGTACTCCAAGATCC...TTTTACCAAGGCCTCTTTTATCTTCTGAAGTATGTCTGCACCTTTCCCCCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp TCCCTCCCACTACCCTCACCCCATGTCTACTGTGCAATCTTGTTCTTGCTCCTAGCAGGAAGTTGTATTTaGCGAAGTCATCATCCCGTG +
Preference number: 4 (lower is better)
Translates to: SLPLPSPHVYCAILFLLLAGSCI*RSHHPV
Trigger: CACGGGATGATGACTTCGGCAAATACAACTTCCTGC...TAGGAGCAAGAACAAGATTGCACAGTAGACATGGGGTGAGGGTAGTGGGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp GTTGAGCATAGGGTGGAAGGGGCTGGGATAGATGGCCATAACAGTATATCTGGGCACACAAACTTCATCTaGAGGTCAAAAGTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: VEHRVEGAGIDGHNSISGHTNFI*RSKVLG
Trigger: ACCCAGCACTTTTGACCTGCAGATGAAGTTTGTGTG...CCCAGATATACTGTTATGGCCATCTATCCCAGCCCCTTCCACCCTATGCTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
3UTR CAA 72 bp TCAGAACCTGAGCTCATGGTGCCTGTATTCTGCCACTaGTCTGTGACAGCTCTTGAGGATATAGCCTCCATT +
Preference number: 4 (lower is better)
Translates to: SEPELMVPVFCH*SVTALEDIASI
Trigger: AATGGAGGCTATATCCTCAAGAGCTGTCACAGACAAGTGGCAGAATACAGGCACCATGAGCTCAGGTTCTGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR TCA 90 bp TCCCTCCCACTACCCTCACCCCATGTCTACTGTGCAATCTTGTTCTTGCTCCTATATTTCTTGGATTCCTaGACGATGTCTTCATGGGTC +
Preference number: 4 (lower is better)
Translates to: SLPLPSPHVYCAILFLLLYFLDS*TMSSWV
Trigger: GACCCATGAAGACATCGTTCAGGAATCCAAGAAATA...TAGGAGCAAGAACAAGATTGCACAGTAGACATGGGGTGAGGGTAGTGGGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR TCA 90 bp GGGTGGGGGAAAGGTGCAGACATACTTCAGAAGATAAAAGAGGCCTTGGTAAAAAGTGGTAGCCCATCATaGTGTCAGCATAGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: GWGKGADILQKIKEALVKSGSPS*CQHSLW
Trigger: CCACAGACTATGCTGACATCATGATGGGCTACCACT...TTTTACCAAGGCCTCTTTTATCTTCTGAAGTATGTCTGCACCTTTCCCCCACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR GCA 90 bp CCAGGGGCCCTAGAGGGGTCACATCTGATTAACTACAGTCATCATTTAAGATGTGTGTCCCCGTCCTCTTaGAGCAGGAAGTTGTATTTG +
Preference number: 4 (lower is better)
Translates to: PGALEGSHLINYSHHLRCVSPSS*SRKLYL
Trigger: CAAATACAACTTCCTGCTGCAAGAGGACGGGGACAC...ACATCTTAAATGATGACTGTAGTTAATCAGATGTGACCCCTCTAGGGCCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp CCAGGGGCCCTAGAGGGGTCACATCTGATTAACTACAGTCATCATTTAAGATGTAGCTCAATGAAACTATaGGCGAAGTGGCAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PGALEGSHLINYSHHLRCSSMKL*AKWQLS
Trigger: GGACAGCTGCCACTTCGCCCATAGTTTCATTGAGCT...ACATCTTAAATGATGACTGTAGTTAATCAGATGTGACCCCTCTAGGGCCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CCA 90 bp GGGTGGGGGAAAGGTGCAGACATACTTCAGAAGATAAAAGAGGCCTTGGTAAAAGTTGCCAGTATTTCTTaGATTCCTGAACGATGTCTT +
Preference number: 4 (lower is better)
Translates to: GWGKGADILQKIKEALVKVASIS*IPERCL
Trigger: AAGACATCGTTCAGGAATCCAAGAAATACTGGCAAC...TTTTACCAAGGCCTCTTTTATCTTCTGAAGTATGTCTGCACCTTTCCCCCACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp CTGCCAGCAGCCAAACTCTGCAGTGCTAGCCAGCTGGGGTCAGGGAAGAGGGGCAGGAAGGAGTCCGGCTaGTCCAGGGAGCCTCGGGCT +
Preference number: 5 (lower is better)
Translates to: LPAAKLCSASQLGSGKRGRKESG*SREPRA
Trigger: AGCCCGAGGCTCCCTGGACAAGCCGGACTCCTTCCT...GCCCCTCTTCCCTGACCCCAGCTGGCTAGCACTGCAGAGTTTGGCTGCTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp CTGCCAGCAGCCAAACTCTGCAGTGCTAGCCAGCTGGGGTCAGGGAAGAGGGGCCCGTCTGGGCAGGCCTaGCCCTTCTGGAGCCTGTCA +
Preference number: 5 (lower is better)
Translates to: LPAAKLCSASQLGSGKRGPSGQA*PFWSLS
Trigger: TGACAGGCTCCAGAAGGGCAAGGCCTGCCCAGACGG...GCCCCTCTTCCCTGACCCCAGCTGGCTAGCACTGCAGAGTTTGGCTGCTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS TCA 90 bp ACCGGCTGCTGCATTCATAGGCCTCTTTGTGGCGCCCCAGCTCGTTaGGGGCGCGCGCCTTGCGGAACAGTGCCCGGATACTCTCGCCAT +
Preference number: 5 (lower is better)
Translates to: TGCCIHRPLCGAPAR*GRAPCGTVPGYSRH
Trigger: ATGGCGAGAGTATCCGGGCACTGTTCCGCAAGGCGCGCGCCCTCAACGAGCTGGGGCGCCACAAAGAGGCCTATGAATGCAGCAGCCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109554.3
ENSMUST00000230946.2
CDS GCA 90 bp TTTGTGGCGCCCCAGCTCGTTGAGGGCGCGCGCCTTGCGGAACAGTaGCCGGATACTCTCGCCATCCAGGCCCAAAGCCTTCTCACTGTC +
Preference number: 5 (lower is better)
Translates to: FVAPQLVEGARLAEQ*PDTLAIQAQSLLTV
Trigger: GACAGTGAGAAGGCTTTGGGCCTGGATGGCGAGAGTATCCGGGCACTGTTCCGCAAGGCGCGCGCCCTCAACGAGCTGGGGCGCCACAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109554.3
ENSMUST00000230946.2
CDS GCA 90 bp TCTGGTTCTCGGAACTCCGGAGGCGGCCGAGGAGGACGTCCCTTCTaGACTTGTGCTCGAGGCCCTCACGGTAGGTATAGTCGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: SGSRNSGGGRGGRPF*TCARGPHGRYSRQP
Trigger: GGGCTGGCGACTATACCTACCGTGAGGGCCTCGAGCACAAGTGCAGAAGGGACGTCCTCCTCGGCCGCCTCCGGAGTTCCGAGAACCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 90 bp GGTAGTAGGAGCCCACAAAGCTGGTTTTGGTGGGCCGCGGCCGGATaGGCTTCCAGATCTGGTTCTCGGAACTCCGGAGGCGGCCGAGGA +
Preference number: 5 (lower is better)
Translates to: GSRSPQSWFWWAAAG*ASRSGSRNSGGGRG
Trigger: TCCTCGGCCGCCTCCGGAGTTCCGAGAACCAGATCTGGAAGCGCATCCGGCCGCGGCCCACCAAAACCAGCTTTGTGGGCTCCTACTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 90 bp TGGGCTGGACACGGGGATGGAGCCACCCACCACAGGTGGCAAGAGTaGGGTCCCACCAGGAAACACGGGGATCAGCTGAGGCAGCTCACT +
Preference number: 5 (lower is better)
Translates to: WAGHGDGATHHRWQE*GPTRKHGDQLRQLT
Trigger: AGTGAGCTGCCTCAGCTGATCCCCGTGTTTCCTGGTGGGACCCCACTCTTGCCACCTGTGGTGGGTGGCTCCATCCCCGTGTCCAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 90 bp ACAAAGCTGGTTTTGGTGGGCCGCGGCCGGATGCGCTTCCAGATCTaGTTCTCGGAACTCCGGAGGCGGCCGAGGAGGACGTCCCTTCTG +
Preference number: 5 (lower is better)
Translates to: TKLVLVGRGRMRFQI*FSELRRRPRRTSLL
Trigger: CAGAAGGGACGTCCTCCTCGGCCGCCTCCGGAGTTCCGAGAACCAGATCTGGAAGCGCATCCGGCCGCGGCCCACCAAAACCAGCTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp GTACTGGGGGTGGAAAGGATGGACAGGGACCCAGCGGACTGGCGCCTGCCTGATAAGAGCAGGTCCCGGTaGAGTGTGCCCTTCCGCTCC +
Preference number: 5 (lower is better)
Translates to: VLGVERMDRDPADWRLPDKSRSR*SVPFRS
Trigger: GGAGCGGAAGGGCACACTCAACCGGGACCTGCTCTT...ATCAGGCAGGCGCCAGTCCGCTGGGTCCCTGTCCATCCTTTCCACCCCCAGTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp GTACTGGGGGTGGAAAGGATGGACAGGGACCCAGCGGACTGGCGCCTGCCTGATGTGAGGCTGCCACGCTaGACACCCCCTAGAGGGTCA +
Preference number: 5 (lower is better)
Translates to: VLGVERMDRDPADWRLPDVRLPR*TPPRGS
Trigger: TGACCCTCTAGGGGGTGTCAAGCGTGGCAGCCTCAC...ATCAGGCAGGCGCCAGTCCGCTGGGTCCCTGTCCATCCTTTCCACCCCCAGTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS TCA 90 bp ACAGGTGGCAAGAGTGGGGTCCCACCAGGAAACACGGGGATCAGCTaGGGCAGCTCACTAGGCATACCACTGCCAGGCAGGCCACCCTGG +
Preference number: 5 (lower is better)
Translates to: TGGKSGVPPGNTGIS*GSSLGIPLPGRPPW
Trigger: CCAGGGTGGCCTGCCTGGCAGTGGTATGCCTAGTGAGCTGCCTCAGCTGATCCCCGTGTTTCCTGGTGGGACCCCACTCTTGCCACCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 90 bp CTGAGAAGTCATCTAGGCCCTCGGTGCCGGGGAGTGTCCTGCTGCTaGCATCCAGTGGGGCCAGGAGGTCCAGAACATGAGGGAACAGGG +
Preference number: 5 (lower is better)
Translates to: LRSHLGPRCRGVSCC*HPVGPGGPEHEGTG
Trigger: CCCTGTTCCCTCATGTTCTGGACCTCCTGGCCCCACTGGATGGCAGCAGCAGGACACTCCCCGGCACCGAGGGCCTAGATGACTTCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 90 bp TGTTGGGCATTGAGGGCTCCGGCGAGGGGGCTGGCTTCTGAGTACTaGTTGGGGGTCGGTGGTCCTGCGAGCTGGTCTCTTCTAGGAAGG +
Preference number: 5 (lower is better)
Translates to: CWALRAPARGLASEY*LGVGGPASWSLLGR
Trigger: CCTTCCTAGAAGAGACCAGCTCGCAGGACCACCGACCCCCAAGCAGTACTCAGAAGCCAGCCCCCTCGCCGGAGCCCTCAATGCCCAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp GAGCAGGTGTGGGCCACCCTGCCTTTTCTGCCCCAATCATCTGAGCCACGGCTCATGAGCAGGGTGGTGTaGGGCATTGAGGGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: EQVWATLPFLPQSSEPRLMSRVV*GIEGSG
Trigger: GCCGGAGCCCTCAATGCCCAACACCACCCTGCTCAT...GAGCCGTGGCTCAGATGATTGGGGCAGAAAAGGCAGGGTGGCCCACACCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 90 bp AGCACCTCACGCCGGTCCAGCCACTCGTTGAGTTCCTCTTGTCCATaGGCACAACGGCACTTGTCTCCGTCTGGGCAGGCCTTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: STSRRSSHSLSSSCP*AQRHLSPSGQALPF
Trigger: GAAGGGCAAGGCCTGCCCAGACGGAGACAAGTGCCGTTGTGCCCATGGACAAGAGGAACTCAACGAGTGGCTGGACCGGCGTGAGGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp AGGCTGAAGCTGGCCAGGCCCCTCCCTCTCCAACCAGGAGAACTAGAATTGGGGGCTTCTGAGTACTGCTaGGGGGTCGGTGGTCCTGCG +
Preference number: 5 (lower is better)
Translates to: RLKLARPLPLQPGELELGASEYC*GVGGPA
Trigger: CGCAGGACCACCGACCCCCAAGCAGTACTCAGAAGC...CCCCAATTCTAGTTCTCCTGGTTGGAGAGGGAGGGGCCTGGCCAGCTTCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp GGCCAGGCCCCTCCCTCTCCAACCAGGAGAACTAGAATTGGGGAGGGTCTGCCCTGCTCCTTCAGGAGCTaGGCAATGGTGAGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: GQAPPSPTRRTRIGEGLPCSFRS*AMVRLP
Trigger: TGGCAGCCTCACCATTGCCAAGCTCCTGAAGGAGCA...GGGCAGACCCTCCCCAATTCTAGTTCTCCTGGTTGGAGAGGGAGGGGCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp GGCCAGGCCCCTCCCTCTCCAACCAGGAGAACTAGAATTGGGGAGGGTCTGCCCGAGTCCTTGGTCCCTTaGCTGATGATCCGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: GQAPPSPTRRTRIGEGLPESLVP*LMIRGL
Trigger: CAAGCCCCGGATCATCAGCAAAGGGACCAAGGACTC...GGGCAGACCCTCCCCAATTCTAGTTCTCCTGGTTGGAGAGGGAGGGGCCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp GAGCAGGTGTGGGCCACCCTGCCTTTTCTGCCCCAATCATCTGAGCCACGGCTCGGCCTTGGCAAGCTTTaGCTTCAGCACCTCACGCCG +
Preference number: 5 (lower is better)
Translates to: EQVWATLPFLPQSSEPRLGLGKL*LQHLTP
Trigger: CGGCGTGAGGTGCTGAAGCAAAAGCTTGCCAAGGCC...GAGCCGTGGCTCAGATGATTGGGGCAGAAAAGGCAGGGTGGCCCACACCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 90 bp CATCTGAGAAGTCATCTAGGCCCTCGGTGCCGGGGAGTGTCCTGCTaGTGCCATCCAGTGGGGCCAGGAGGTCCAGAACATGAGGGAACA +
Preference number: 5 (lower is better)
Translates to: HLRSHLGPRCRGVSC*CHPVGPGGPEHEGT
Trigger: TGTTCCCTCATGTTCTGGACCTCCTGGCCCCACTGGATGGCAGCAGCAGGACACTCCCCGGCACCGAGGGCCTAGATGACTTCTCAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS TCA 90 bp GCCTCTCCTTGGTCCAGCAATGCCGGGCCTTGGCACTGCAGTACTTaGGGTCCTTGTCCGGCTCTACCACCTGCCCATTCCTCCAACACT +
Preference number: 5 (lower is better)
Translates to: ASPWSSNAGPWHCST*GPCPALPPAHSSNT
Trigger: AGTGTTGGAGGAATGGGCAGGTGGTAGAGCCGGACAAGGACCTCAAGTACTGCAGTGCCAAGGCCCGGCATTGCTGGACCAAGGAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 90 bp GGGTCCGTGTGTCCTTGGGGCACCCAAGCCGCTGCTGGCCTTCCCTaGGTGGGCTTCCATCTGTTGCCAGTATTTCTTGGATTCCTGAAC +
Preference number: 5 (lower is better)
Translates to: GSVCPWGTQAAAGLP*VGFHLLPVFLGFLN
Trigger: GTTCAGGAATCCAAGAAATACTGGCAACAGATGGAAGCCCACGCAGGGAAGGCCAGCAGCGGCTTGGGTGCCCCAAGGACACACGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 90 bp GAATGGATGGCAGCGGCCTCACGGACACCCATTTCCTCTTGGCCTTaGACATCACCAGAAGGACCCGCCTCTCCTTGGTCCAGCAATGCC +
Preference number: 5 (lower is better)
Translates to: EWMAAASRTPISSWP*TSPEGPASPWSSNA
Trigger: GGCATTGCTGGACCAAGGAGAGGCGGGTCCTTCTGGTGATGTCCAAGGCCAAGAGGAAATGGGTGTCCGTGAGGCCGCTGCCATCCATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp GAAGAGGGGCAGGGGAGAGGAGACGGTGCATGCCATGGTTATCAGGAGAAGGTTAACTGGCAGGCCTGCTaGAACTCGTGGGTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: EEGQGRGDGACHGYQEKVNWQAC*NSWVAA
Trigger: GGCTGCCACCCACGAGTTCAAGCAGGCCTGCCAGTT...AACCTTCTCCTGATAACCATGGCATGCACCGTCTCCTCTCCCCTGCCCCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp CTGCCAGCAGCCAAACTCTGCAGTGCTAGCCAGCTGGGGTCAGGGAAGAGGGGCCATTTCCTCTTGGCCTaGGACATCACCAGAAGGACC +
Preference number: 5 (lower is better)
Translates to: LPAAKLCSASQLGSGKRGHFLLA*DITRRT
Trigger: GGTCCTTCTGGTGATGTCCAAGGCCAAGAGGAAATG...GCCCCTCTTCCCTGACCCCAGCTGGCTAGCACTGCAGAGTTTGGCTGCTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp CTGCCAGCAGCCAAACTCTGCAGTGCTAGCCAGCTGGGGTCAGGGAAGAGGGGCCACTGTTTCTTGCTGTaGCTGTTCTTGCCGCAGAGC +
Preference number: 5 (lower is better)
Translates to: LPAAKLCSASQLGSGKRGHCFLL*LFLPQS
Trigger: GCTCTGCGGCAAGAACAGCAACAGCAAGAAACAGTG...GCCCCTCTTCCCTGACCCCAGCTGGCTAGCACTGCAGAGTTTGGCTGCTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS TCA 90 bp CGCACCTCGTGGCGGCACACGTCAAACTGGAAGTGCTCCTGGAACTaGCGGATCTTGGAGTACTTGAGAGAGGTGGAGCGGACGATGTGC +
Preference number: 5 (lower is better)
Translates to: RTSWRHTSNWKCSWN*RILEYLREVERTMC
Trigger: GCACATCGTCCGCTCCACCTCTCTCAAGTACTCCAAGATCCGTCAGTTCCAGGAGCACTTCCAGTTTGACGTGTGCCGCCACGAGGTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 90 bp TCCCGTGGACACAGAAGCATGTCCTTGCGGGCCTTGGCAAGCTTTTaGTTCAGCACCTCACGCCGGTCCAGCCACTCGTTGAGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: SRGHRSMSLRALASF*FSTSRRSSHSLSSS
Trigger: AGAGGAACTCAACGAGTGGCTGGACCGGCGTGAGGTGCTGAAGCAAAAGCTTGCCAAGGCCCGCAAGGACATGCTTCTGTGTCCACGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 90 bp TCCAACACTGACCGCACACAAACTTCATCTGCAGGTCAAAAGTGCTaGGTCCGTGTGTCCTTGGGGCACCCAAGCCGCTGCTGGCCTTCC +
Preference number: 5 (lower is better)
Translates to: SNTDRTQTSSAGQKC*VRVSLGHPSRCWPS
Trigger: GGAAGGCCAGCAGCGGCTTGGGTGCCCCAAGGACACACGGACCCAGCACTTTTGACCTGCAGATGAAGTTTGTGTGCGGTCAGTGTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 90 bp AGTTTCGAATGGATGGCAGCGGCCTCACGGACACCCATTTCCTCTTaGCCTTGGACATCACCAGAAGGACCCGCCTCTCCTTGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: SFEWMAAASRTPISS*PWTSPEGPASPWSS
Trigger: GCTGGACCAAGGAGAGGCGGGTCCTTCTGGTGATGTCCAAGGCCAAGAGGAAATGGGTGTCCGTGAGGCCGCTGCCATCCATTCGAAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 90 bp GTTGAGTTCCTCTTGTCCATGGGCACAACGGCACTTGTCTCCGTCTaGGCAGGCCTTGCCCTTCTGGAGCCTGTCACAGAGTCGGAACTC +
Preference number: 5 (lower is better)
Translates to: VEFLLSMGTTALVSV*AGLALLEPVTESEL
Trigger: GAGTTCCGACTCTGTGACAGGCTCCAGAAGGGCAAGGCCTGCCCAGACGGAGACAAGTGCCGTTGTGCCCATGGACAAGAGGAACTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 90 bp CGAAGTCATCATCCCGTGGACACAGAAGCATGTCCTTGCGGGCCTTaGCAAGCTTTTGCTTCAGCACCTCACGCCGGTCCAGCCACTCGT +
Preference number: 5 (lower is better)
Translates to: RSHHPVDTEACPCGP*QAFASAPHAGPATR
Trigger: ACGAGTGGCTGGACCGGCGTGAGGTGCTGAAGCAAAAGCTTGCCAAGGCCCGCAAGGACATGCTTCTGTGTCCACGGGATGATGACTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp GGCCAGGCCCCTCCCTCTCCAACCAGGAGAACTAGAATTGGGGAGGGTCTGCCCAGGTTCTGCACAAGCTaGAGCAGGAAAGCCTCATAC +
Preference number: 5 (lower is better)
Translates to: GQAPPSPTRRTRIGEGLPRFCTS*SRKASY
Trigger: GTATGAGGCTTTCCTGCTCAAGCTTGTGCAGAACCT...GGGCAGACCCTCCCCAATTCTAGTTCTCCTGGTTGGAGAGGGAGGGGCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp AGGCTGAAGCTGGCCAGGCCCCTCCCTCTCCAACCAGGAGAACTAGAATTGGGGTTGGCACTGCAGTACTaGAGGTCCTTGTCCGGCTCT +
Preference number: 5 (lower is better)
Translates to: RLKLARPLPLQPGELELGLALQY*RSLSGS
Trigger: AGAGCCGGACAAGGACCTCAAGTACTGCAGTGCCAA...CCCCAATTCTAGTTCTCCTGGTTGGAGAGGGAGGGGCCTGGCCAGCTTCAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS TCA 90 bp TGGCAAGCTTTTGCTTCAGCACCTCACGCCGGTCCAGCCACTCGTTaGGTTCCTCTTGTCCATGGGCACAACGGCACTTGTCTCCGTCTG +
Preference number: 5 (lower is better)
Translates to: WQAFASAPHAGPATR*VPLVHGHNGTCLRL
Trigger: CAGACGGAGACAAGTGCCGTTGTGCCCATGGACAAGAGGAACTCAACGAGTGGCTGGACCGGCGTGAGGTGCTGAAGCAAAAGCTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 90 bp TCATGTCTTTGCACAGGTAGTAGGAGCCCACAAAGCTGGTTTTGGTaGGCCGCGGCCGGATGCGCTTCCAGATCTGGTTCTCGGAACTCC +
Preference number: 5 (lower is better)
Translates to: SCLCTGSRSPQSWFW*AAAGCASRSGSRNS
Trigger: GGAGTTCCGAGAACCAGATCTGGAAGCGCATCCGGCCGCGGCCCACCAAAACCAGCTTTGTGGGCTCCTACTACCTGTGCAAAGACATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 90 bp GGCTTGCTGTCGAAGCAGATCTCACAGAGGAAGGTGAAGATGCCCTaGTGCTCCTTCAGGAGCTTGGCAATGGTGAGGCTGCCACGCTTG +
Preference number: 5 (lower is better)
Translates to: GLLSKQISQRKVKMP*CSFRSLAMVRLPRL
Trigger: CAAGCGTGGCAGCCTCACCATTGCCAAGCTCCTGAAGGAGCACCAGGGCATCTTCACCTTCCTCTGTGAGATCTGCTTCGACAGCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp CTGCCAGCAGCCAAACTCTGCAGTGCTAGCCAGCTGGGGTCAGGGAAGAGGGGCTGCAGCAACCAGACCTaGAGCTCAATGAAACTATGG +
Preference number: 5 (lower is better)
Translates to: LPAAKLCSASQLGSGKRGCSNQT*SSMKLW
Trigger: CCATAGTTTCATTGAGCTCAAGGTCTGGTTGCTGCA...GCCCCTCTTCCCTGACCCCAGCTGGCTAGCACTGCAGAGTTTGGCTGCTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp AGCAGGGTTGAGCATAGGGTGGAAGGGGCTGGGATAGATGGCCATAACAGTATATGGGCACAACGGCACTaGTCTCCGTCTGGGCAGGCC +
Preference number: 5 (lower is better)
Translates to: SRVEHRVEGAGIDGHNSIWAQRH*SPSGQA
Trigger: GGCCTGCCCAGACGGAGACAAGTGCCGTTGTGCCCA...TATACTGTTATGGCCATCTATCCCAGCCCCTTCCACCCTATGCTCAACCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS TCA 90 bp CATAGTCTGTGGGCATCTGGATCTGCTTCTCTCCTTCCCGAGAGCTaGTGGGGGTCCCTTCTCCCGGCTTCCCTGGGTTGTGTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: HSLWASGSASLLPES*WGSLLPASLGCVSS
Trigger: TGAAGAAACACAACCCAGGGAAGCCGGGAGAAGGGACCCCCATCAGCTCTCGGGAAGGAGAGAAGCAGATCCAGATGCCCACAGACTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 90 bp TGGCACCAGTGGTGTCCCCGTCCTCTTGCAGCAGGAAGTTGTATTTaGCGAAGTCATCATCCCGTGGACACAGAAGCATGTCCTTGCGGG +
Preference number: 5 (lower is better)
Translates to: WHQWCPRPLAAGSCI*RSHHPVDTEACPCG
Trigger: CCCGCAAGGACATGCTTCTGTGTCCACGGGATGATGACTTCGGCAAATACAACTTCCTGCTGCAAGAGGACGGGGACACCACTGGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp TCCCTCCCACTACCCTCACCCCATGTCTACTGTGCAATCTTGTTCTTGCTCCTAACGTCCCTTCTGCACTaGTGCTCGAGGCCCTCACGG +
Preference number: 5 (lower is better)
Translates to: SLPLPSPHVYCAILFLLLTSLLH*CSRPSR
Trigger: CCGTGAGGGCCTCGAGCACAAGTGCAGAAGGGACGT...TAGGAGCAAGAACAAGATTGCACAGTAGACATGGGGTGAGGGTAGTGGGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp GAAGAGGGGCAGGGGAGAGGAGACGGTGCATGCCATGGTTATCAGGAGAAGGTTCTGATGATCCGGGGCTaGCTGTCGAAGCAGATCTCA +
Preference number: 5 (lower is better)
Translates to: EEGQGRGDGACHGYQEKVLMIRG*LSKQIS
Trigger: TGAGATCTGCTTCGACAGCAAGCCCCGGATCATCAG...AACCTTCTCCTGATAACCATGGCATGCACCGTCTCCTCTCCCCTGCCCCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp GGGGGTGCCCCACTTCTTGTGCCAATAGGGTGGAGCATTCTGGAATGTCTTGGGATGTCCTTGCGGGCCTaGGCAAGCTTTTGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: GGAPLLVPIGWSILECLGMSLRA*ASFCFS
Trigger: GCTGAAGCAAAAGCTTGCCAAGGCCCGCAAGGACAT...CCCAAGACATTCCAGAATGCTCCACCCTATTGGCACAAGAAGTGGGGCACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 90 bp TTGCTGTCGAAGCAGATCTCACAGAGGAAGGTGAAGATGCCCTGGTaGTCCTTCAGGAGCTTGGCAATGGTGAGGCTGCCACGCTTGACA +
Preference number: 5 (lower is better)
Translates to: LLSKQISQRKVKMPW*SFRSLAMVRLPRLT
Trigger: TGTCAAGCGTGGCAGCCTCACCATTGCCAAGCTCCTGAAGGAGCACCAGGGCATCTTCACCTTCCTCTGTGAGATCTGCTTCGACAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 90 bp TGTATTTGCCGAAGTCATCATCCCGTGGACACAGAAGCATGTCCTTaGGGGCCTTGGCAAGCTTTTGCTTCAGCACCTCACGCCGGTCCA +
Preference number: 5 (lower is better)
Translates to: CICRSHHPVDTEACP*GPWQAFASAPHAGP
Trigger: TGGACCGGCGTGAGGTGCTGAAGCAAAAGCTTGCCAAGGCCCGCAAGGACATGCTTCTGTGTCCACGGGATGATGACTTCGGCAAATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 90 bp ACTGCACCAGAGCCTGCTTGTAGTCCTTCTCCCGGAACAGGTCGTTaGCCTCGGCAAACAGGTTCTGCACAAGCTCATACTCCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: TAPEPACSPSPGTGR*PRQTGSAQAHTPLA
Trigger: AGCAAGAGGAGTATGAGCTTGTGCAGAACCTGTTTGCCGAGGGCAACGACCTGTTCCGGGAGAAGGACTACAAGCAGGCTCTGGTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230946.2
CDS CCA 90 bp CTCTCCTTCCCGAGAGCTGATGGGGGTCCCTTCTCCCGGCTTCCCTaGGTTGTGTTTCTTCAGCCACATGTCATAGGTCTGTTGCATATC +
Preference number: 5 (lower is better)
Translates to: LSFPRADGGPFSRLP*VVFLQPHVIGLLHI
Trigger: GATATGCAACAGACCTATGACATGTGGCTGAAGAAACACAACCCAGGGAAGCCGGGAGAAGGGACCCCCATCAGCTCTCGGGAAGGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp GAGCAGGTGTGGGCCACCCTGCCTTTTCTGCCCCAATCATCTGAGCCACGGCTCTGCATATCCAGGATCTaGTTCTCCTTCATGAAGGTC +
Preference number: 5 (lower is better)
Translates to: EQVWATLPFLPQSSEPRLCISRI*FSFMKV
Trigger: GACCTTCATGAAGGAGAACAAGATCCTGGATATGCA...GAGCCGTGGCTCAGATGATTGGGGCAGAAAAGGCAGGGTGGCCCACACCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp GCCACACTGCCAGCAGCCAAACTCTGCAGTGCTAGCCAGCTGGGGTCAGGGAAGTCTTGCAGCAGGAAGTaGTATTTGCCGAAGTCATCA +
Preference number: 5 (lower is better)
Translates to: ATLPAAKLCSASQLGSGKSCSRK*YLPKSS
Trigger: TGATGACTTCGGCAAATACAACTTCCTGCTGCAAGA...CTTCCCTGACCCCAGCTGGCTAGCACTGCAGAGTTTGGCTGCTGGCAGTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 90 bp CCTCAGGGCTGTGTGCGAAGGAGCAGTTCCCCACATACTGGCATTTaGGGCCGTTCTGGGCATGAATACATAGGTCATATTGCTGTGGGA +
Preference number: 5 (lower is better)
Translates to: PQGCVRRSSSPHTGI*GRSGHEYIGHIAVG
Trigger: TCCCACAGCAATATGACCTATGTATTCATGCCCAGAACGGCCGCAAATGCCAGTATGTGGGGAACTGCTCCTTCGCACACAGCCCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 90 bp TCGTTGCCCTCGGCAAACAGGTTCTGCACAAGCTCATACTCCTCTTaGTTCAGGGGTAGTGTTGACTGGATGAACTGCAGCCCCTTCTCG +
Preference number: 5 (lower is better)
Translates to: SLPSANRFCTSSYSS*FRGSVDWMNCSPFS
Trigger: CGAGAAGGGGCTGCAGTTCATCCAGTCAACACTACCCCTGAAGCAAGAGGAGTATGAGCTTGTGCAGAACCTGTTTGCCGAGGGCAACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000230946.2
CDS CCA 90 bp GTTGTTGTAAAAGCTGTGCTTGGCAGCCAGGTTGGAGCAGACAGATaGAGAGTCCTTGGTCCCTTTGCTGATGATCCGGGGCTTGCTGTC +
Preference number: 5 (lower is better)
Translates to: VVVKAVLGSQVGADR*RVLGPFADDPGLAV
Trigger: GACAGCAAGCCCCGGATCATCAGCAAAGGGACCAAGGACTCTCCATCTGTCTGCTCCAACCTGGCTGCCAAGCACAGCTTTTACAACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp GTTGAGCATAGGGTGGAAGGGGCTGGGATAGATGGCCATAACAGTATATCTGGGCTGTTGACATGCAGTTaGCACAGCAGCTCCCGGGGT +
Preference number: 5 (lower is better)
Translates to: VEHRVEGAGIDGHNSISGLLTCS*HSSSRG
Trigger: ACCCCGGGAGCTGCTGTGCAAACTGCATGTCAACAG...CCCAGATATACTGTTATGGCCATCTATCCCAGCCCCTTCCACCCTATGCTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp TCCCTCCCACTACCCTCACCCCATGTCTACTGTGCAATCTTGTTCTTGCTCCTACGGATCTTGGAGTACTaGAGAGAGGTGGAGCGGACG +
Preference number: 5 (lower is better)
Translates to: SLPLPSPHVYCAILFLLLRILEY*REVERT
Trigger: CGTCCGCTCCACCTCTCTCAAGTACTCCAAGATCCG...TAGGAGCAAGAACAAGATTGCACAGTAGACATGGGGTGAGGGTAGTGGGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp TCCCTCCCACTACCCTCACCCCATGTCTACTGTGCAATCTTGTTCTTGCTCCTATTGCTGTTGCTGTTCTaGCCGCAGAGCCAGCAGTGG +
Preference number: 5 (lower is better)
Translates to: SLPLPSPHVYCAILFLLLLLLLF*PQSQQW
Trigger: CCACTGCTGGCTCTGCGGCAAGAACAGCAACAGCAA...TAGGAGCAAGAACAAGATTGCACAGTAGACATGGGGTGAGGGTAGTGGGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp GGGGGTGCCCCACTTCTTGTGCCAATAGGGTGGAGCATTCTGGAATGTCTTGGGAGCAGGAAGTTGTATTaGCCGAAGTCATCATCCCGT +
Preference number: 5 (lower is better)
Translates to: GGAPLLVPIGWSILECLGSRKLY*PKSSSR
Trigger: ACGGGATGATGACTTCGGCAAATACAACTTCCTGCT...CCCAAGACATTCCAGAATGCTCCACCCTATTGGCACAAGAAGTGGGGCACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 90 bp TCTGGGCATGAATACATAGGTCATATTGCTGTGGGAAGTTTCGAATaGATGGCAGCGGCCTCACGGACACCCATTTCCTCTTGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: SGHEYIGHIAVGSFE*MAAASRTPISSWPW
Trigger: CCAAGGCCAAGAGGAAATGGGTGTCCGTGAGGCCGCTGCCATCCATTCGAAACTTCCCACAGCAATATGACCTATGTATTCATGCCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 90 bp GTCCTCTTGCAGCAGGAAGTTGTATTTGCCGAAGTCATCATCCCGTaGACACAGAAGCATGTCCTTGCGGGCCTTGGCAAGCTTTTGCTT +
Preference number: 5 (lower is better)
Translates to: VLLQQEVVFAEVIIP*TQKHVLAGLGKLLL
Trigger: AAGCAAAAGCTTGCCAAGGCCCGCAAGGACATGCTTCTGTGTCCACGGGATGATGACTTCGGCAAATACAACTTCCTGCTGCAAGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp GGGTGGGGGAAAGGTGCAGACATACTTCAGAAGATAAAAGAGGCCTTGGTAAAATCCCGGAACAGGTCGTaGCCCTCGGCAAACAGGTTC +
Preference number: 5 (lower is better)
Translates to: GWGKGADILQKIKEALVKSRNRS*PSANRF
Trigger: GAACCTGTTTGCCGAGGGCAACGACCTGTTCCGGGA...TTTTACCAAGGCCTCTTTTATCTTCTGAAGTATGTCTGCACCTTTCCCCCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp GGAGCCCAGATCTCAGGGACCCCTGGACAGACGAACAGTAGAAAAACCCTGGATGTGGGCTTCCATCTGTaGCCAGTATTTCTTGGATTC +
Preference number: 5 (lower is better)
Translates to: GAQISGTPGQTNSRKTLDVGFHL*PVFLGF
Trigger: GAATCCAAGAAATACTGGCAACAGATGGAAGCCCAC...ATCCAGGGTTTTTCTACTGTTCGTCTGTCCAGGGGTCCCTGAGATCTGGGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp GTTGAGCATAGGGTGGAAGGGGCTGGGATAGATGGCCATAACAGTATATCTGGGGGTGTCCCCGTCCTCTaGCAGCAGGAAGTTGTATTT +
Preference number: 5 (lower is better)
Translates to: VEHRVEGAGIDGHNSISGGVPVL*QQEVVF
Trigger: AAATACAACTTCCTGCTGCAAGAGGACGGGGACACC...CCCAGATATACTGTTATGGCCATCTATCCCAGCCCCTTCCACCCTATGCTCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp TCCCTCCCACTACCCTCACCCCATGTCTACTGTGCAATCTTGTTCTTGCTCCTAACAGATGGAGAGTCCTaGGTCCCTTTGCTGATGATC +
Preference number: 5 (lower is better)
Translates to: SLPLPSPHVYCAILFLLLTDGES*VPLLMI
Trigger: GATCATCAGCAAAGGGACCAAGGACTCTCCATCTGT...TAGGAGCAAGAACAAGATTGCACAGTAGACATGGGGTGAGGGTAGTGGGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp GAAGAGGGGCAGGGGAGAGGAGACGGTGCATGCCATGGTTATCAGGAGAAGGTTCATGTCATAGGTCTGTaGCATATCCAGGATCTTGTT +
Preference number: 5 (lower is better)
Translates to: EEGQGRGDGACHGYQEKVHVIGL*HIQDLV
Trigger: AACAAGATCCTGGATATGCAACAGACCTATGACATG...AACCTTCTCCTGATAACCATGGCATGCACCGTCTCCTCTCCCCTGCCCCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp GGGGGTGCCCCACTTCTTGTGCCAATAGGGTGGAGCATTCTGGAATGTCTTGGGCCCGTACTTACAGTCTaGCTTGTTAATCATGTCTTT +
Preference number: 5 (lower is better)
Translates to: GGAPLLVPIGWSILECLGPVLTV*LVNHVF
Trigger: AAAGACATGATTAACAAGCAAGACTGTAAGTACGGG...CCCAAGACATTCCAGAATGCTCCACCCTATTGGCACAAGAAGTGGGGCACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS-3UTR CAA 90 bp CCAGGGGCCCTAGAGGGGTCACATCTGATTAACTACAGTCATCATTTAAGATGTGACACCCATTTCCTCTaGGCCTTGGACATCACCAGA +
Preference number: 5 (lower is better)
Translates to: PGALEGSHLINYSHHLRCDTHFL*ALDITR
Trigger: TCTGGTGATGTCCAAGGCCAAGAGGAAATGGGTGTC...ACATCTTAAATGATGACTGTAGTTAATCAGATGTGACCCCTCTAGGGCCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 72 bp GTTTTGGTGGGCCGCGGCCGGATGCGCTTCCAGATCTaGTTCTCGGAACTCCGGAGGCGGCCGAGGAGGACG +
Preference number: 6 (lower is better)
Translates to: VLVGRGRMRFQI*FSELRRRPRRT
Trigger: CGTCCTCCTCGGCCGCCTCCGGAGTTCCGAGAACCAGATCTGGAAGCGCATCCGGCCGCGGCCCACCAAAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 72 bp CCCCAGCTCGTTGAGGGCGCGCGCCTTGCGGAACAGTaGCCGGATACTCTCGCCATCCAGGCCCAAAGCCTT +
Preference number: 6 (lower is better)
Translates to: PQLVEGARLAEQ*PDTLAIQAQSL
Trigger: AAGGCTTTGGGCCTGGATGGCGAGAGTATCCGGGCACTGTTCCGCAAGGCGCGCGCCCTCAACGAGCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109554.3
ENSMUST00000230946.2
CDS CCA 72 bp CCTTCTGGAGCCTGTCACAGAGTCGGAACTCGCCCATaGGGAAGCGGTAGGCCCAGCCGCTGGCGTCGCTGT +
Preference number: 6 (lower is better)
Translates to: PSGACHRVGTRP*GSGRPSRWRRC
Trigger: ACAGCGACGCCAGCGGCTGGGCCTACCGCTTCCCCATGGGCGAGTTCCGACTCTGTGACAGGCTCCAGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp TCTTTGTGGCGCCCCAGCTCGTTGAGGGCGCGCGCCTaGCGGAACAGTGCCCGGATACTCTCGCCATCCAGG +
Preference number: 6 (lower is better)
Translates to: SLWRPSSLRARA*RNSARILSPSR
Trigger: CCTGGATGGCGAGAGTATCCGGGCACTGTTCCGCAAGGCGCGCGCCCTCAACGAGCTGGGGCGCCACAAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000109554.3
ENSMUST00000230946.2
CDS GCA 72 bp TTGAGGGCTCCGGCGAGGGGGCTGGCTTCTGAGTACTaGTTGGGGGTCGGTGGTCCTGCGAGCTGGTCTCTT +
Preference number: 6 (lower is better)
Translates to: LRAPARGLASEY*LGVGGPASWSL
Trigger: AAGAGACCAGCTCGCAGGACCACCGACCCCCAAGCAGTACTCAGAAGCCAGCCCCCTCGCCGGAGCCCTCAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 72 bp CACGGGGATGGAGCCACCCACCACAGGTGGCAAGAGTaGGGTCCCACCAGGAAACACGGGGATCAGCTGAGG +
Preference number: 6 (lower is better)
Translates to: HGDGATHHRWQE*GPTRKHGDQLR
Trigger: CCTCAGCTGATCCCCGTGTTTCCTGGTGGGACCCCACTCTTGCCACCTGTGGTGGGTGGCTCCATCCCCGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 72 bp TGGGTCCGTGTGTCCTTGGGGCACCCAAGCCGCTGCTaGCCTTCCCTGCGTGGGCTTCCATCTGTTGCCAGT +
Preference number: 6 (lower is better)
Translates to: WVRVSLGHPSRC*PSLRGLPSVAS
Trigger: ACTGGCAACAGATGGAAGCCCACGCAGGGAAGGCCAGCAGCGGCTTGGGTGCCCCAAGGACACACGGACCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp AGGGCTCCGGCGAGGGGGCTGGCTTCTGAGTACTGCTaGGGGGTCGGTGGTCCTGCGAGCTGGTCTCTTCTA +
Preference number: 6 (lower is better)
Translates to: RAPARGLASEYC*GVGGPASWSLL
Trigger: TAGAAGAGACCAGCTCGCAGGACCACCGACCCCCAAGCAGTACTCAGAAGCCAGCCCCCTCGCCGGAGCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp GTGGCAGCCAGAGGGTTCTTGATGAGCAGGGTGGTGTaGGGCATTGAGGGCTCCGGCGAGGGGGCTGGCTTC +
Preference number: 6 (lower is better)
Translates to: VAARGFLMSRVV*GIEGSGEGAGF
Trigger: GAAGCCAGCCCCCTCGCCGGAGCCCTCAATGCCCAACACCACCCTGCTCATCAAGAACCCTCTGGCTGCCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS TCA 72 bp TGCATTCATAGGCCTCTTTGTGGCGCCCCAGCTCGTTaGGGGCGCGCGCCTTGCGGAACAGTGCCCGGATAC +
Preference number: 6 (lower is better)
Translates to: CIHRPLCGAPAR*GRAPCGTVPGY
Trigger: GTATCCGGGCACTGTTCCGCAAGGCGCGCGCCCTCAACGAGCTGGGGCGCCACAAAGAGGCCTATGAATGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109554.3
ENSMUST00000230946.2
CDS GCA 72 bp AGTCATCTAGGCCCTCGGTGCCGGGGAGTGTCCTGCTaGTGCCATCCAGTGGGGCCAGGAGGTCCAGAACAT +
Preference number: 6 (lower is better)
Translates to: SHLGPRCRGVSC*CHPVGPGGPEH
Trigger: ATGTTCTGGACCTCCTGGCCCCACTGGATGGCAGCAGCAGGACACTCCCCGGCACCGAGGGCCTAGATGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 72 bp AGAAGTCATCTAGGCCCTCGGTGCCGGGGAGTGTCCTaGTGCTGCCATCCAGTGGGGCCAGGAGGTCCAGAA +
Preference number: 6 (lower is better)
Translates to: RSHLGPRCRGVS*CCHPVGPGGPE
Trigger: TTCTGGACCTCCTGGCCCCACTGGATGGCAGCAGCAGGACACTCCCCGGCACCGAGGGCCTAGATGACTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 72 bp CGGAACTCCGGAGGCGGCCGAGGAGGACGTCCCTTCTaGACTTGTGCTCGAGGCCCTCACGGTAGGTATAGT +
Preference number: 6 (lower is better)
Translates to: RNSGGGRGGRPF*TCARGPHGRYS
Trigger: ACTATACCTACCGTGAGGGCCTCGAGCACAAGTGCAGAAGGGACGTCCTCCTCGGCCGCCTCCGGAGTTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 72 bp GGGCACAACGGCACTTGTCTCCGTCTGGGCAGGCCTTaGCCTTCTGGAGCCTGTCACAGAGTCGGAACTCGC +
Preference number: 6 (lower is better)
Translates to: GHNGTCLRLGRP*PSGACHRVGTR
Trigger: GCGAGTTCCGACTCTGTGACAGGCTCCAGAAGGGCAAGGCCTGCCCAGACGGAGACAAGTGCCGTTGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 72 bp CATCTGCAGGTCAAAAGTGCTGGGTCCGTGTGTCCTTaGGGCACCCAAGCCGCTGCTGGCCTTCCCTGCGTG +
Preference number: 6 (lower is better)
Translates to: HLQVKSAGSVCP*GTQAAAGLPCV
Trigger: CACGCAGGGAAGGCCAGCAGCGGCTTGGGTGCCCCAAGGACACACGGACCCAGCACTTTTGACCTGCAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 72 bp CGCCGGTCCAGCCACTCGTTGAGTTCCTCTTGTCCATaGGCACAACGGCACTTGTCTCCGTCTGGGCAGGCC +
Preference number: 6 (lower is better)
Translates to: RRSSHSLSSSCP*AQRHLSPSGQA
Trigger: GGCCTGCCCAGACGGAGACAAGTGCCGTTGTGCCCATGGACAAGAGGAACTCAACGAGTGGCTGGACCGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 90 bp TGGGCATTGAGGGCTCCGGCGAGGGGGCTGGCTTCTGAGTACTGCTaGGGGGTCGGTGGTCCTGCGAGCTGGTCTCTTCTAGGAAGGAGT +
Preference number: 6 (lower is better)
Translates to: WALRAPARGLASEYC*GVGGPASWSLLGRS
Trigger: ACTCCTTCCTAGAAGAGACCAGCTCGCAGGACCACCGACCCCCAAGCAGTACTCAGAAGCCAGCCCCCTCGCCGGAGCCCTCAATGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 90 bp AACTGGCAGGCCTGCTTGAACTCGTGGGTGGCAGCCAGAGGGTTCTaGATGAGCAGGGTGGTGTTGGGCATTGAGGGCTCCGGCGAGGGG +
Preference number: 6 (lower is better)
Translates to: NWQACLNSWVAARGF*MSRVVLGIEGSGEG
Trigger: CCCCTCGCCGGAGCCCTCAATGCCCAACACCACCCTGCTCATCAAGAACCCTCTGGCTGCCACCCACGAGTTCAAGCAGGCCTGCCAGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 72 bp TTTCATCGTGGGGAAGCGCGAGGGAGCACCGGCTGCTaGATTCATAGGCCTCTTTGTGGCGCCCCAGCTCGT +
Preference number: 6 (lower is better)
Translates to: FHRGEARGSTGC*IHRPLCGAPAR
Trigger: ACGAGCTGGGGCGCCACAAAGAGGCCTATGAATGCAGCAGCCGGTGCTCCCTCGCGCTTCCCCACGATGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109554.3
ENSMUST00000230946.2
CDS GCA 72 bp ACACATCCCCATCTGAGAAGTCATCTAGGCCCTCGGTaGCGGGGAGTGTCCTGCTGCTGCCATCCAGTGGGG +
Preference number: 6 (lower is better)
Translates to: THPHLRSHLGPR*RGVSCCCHPVG
Trigger: CCCCACTGGATGGCAGCAGCAGGACACTCCCCGGCACCGAGGGCCTAGATGACTTCTCAGATGGGGATGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 72 bp GCAGCGGCCTCACGGACACCCATTTCCTCTTGGCCTTaGACATCACCAGAAGGACCCGCCTCTCCTTGGTCC +
Preference number: 6 (lower is better)
Translates to: AAASRTPISSWP*TSPEGPASPWS
Trigger: GGACCAAGGAGAGGCGGGTCCTTCTGGTGATGTCCAAGGCCAAGAGGAAATGGGTGTCCGTGAGGCCGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp TCATCTGCAGGTCAAAAGTGCTGGGTCCGTGTGTCCTaGGGGCACCCAAGCCGCTGCTGGCCTTCCCTGCGT +
Preference number: 6 (lower is better)
Translates to: SSAGQKCWVRVS*GHPSRCWPSLR
Trigger: ACGCAGGGAAGGCCAGCAGCGGCTTGGGTGCCCCAAGGACACACGGACCCAGCACTTTTGACCTGCAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp AGGACCCGCCTCTCCTTGGTCCAGCAATGCCGGGCCTaGGCACTGCAGTACTTGAGGTCCTTGTCCGGCTCT +
Preference number: 6 (lower is better)
Translates to: RTRLSLVQQCRA*ALQYLRSLSGS
Trigger: AGAGCCGGACAAGGACCTCAAGTACTGCAGTGCCAAGGCCCGGCATTGCTGGACCAAGGAGAGGCGGGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp GGCAGCGGCCTCACGGACACCCATTTCCTCTTGGCCTaGGACATCACCAGAAGGACCCGCCTCTCCTTGGTC +
Preference number: 6 (lower is better)
Translates to: GSGLTDTHFLLA*DITRRTRLSLV
Trigger: GACCAAGGAGAGGCGGGTCCTTCTGGTGATGTCCAAGGCCAAGAGGAAATGGGTGTCCGTGAGGCCGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp TGGGCACAACGGCACTTGTCTCCGTCTGGGCAGGCCTaGCCCTTCTGGAGCCTGTCACAGAGTCGGAACTCG +
Preference number: 6 (lower is better)
Translates to: WAQRHLSPSGQA*PFWSLSQSRNS
Trigger: CGAGTTCCGACTCTGTGACAGGCTCCAGAAGGGCAAGGCCTGCCCAGACGGAGACAAGTGCCGTTGTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 90 bp CCCTGGTGCTCCTTCAGGAGCTTGGCAATGGTGAGGCTGCCACGCTaGACACCCCCTAGAGGGTCAAAGAGCAGGTCCCGGTTGAGTGTG +
Preference number: 6 (lower is better)
Translates to: PWCSFRSLAMVRLPR*TPPRGSKSRSRLSV
Trigger: CACACTCAACCGGGACCTGCTCTTTGACCCTCTAGGGGGTGTCAAGCGTGGCAGCCTCACCATTGCCAAGCTCCTGAAGGAGCACCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 90 bp CGCCTCTCCTTGGTCCAGCAATGCCGGGCCTTGGCACTGCAGTACTaGAGGTCCTTGTCCGGCTCTACCACCTGCCCATTCCTCCAACAC +
Preference number: 6 (lower is better)
Translates to: RLSLVQQCRALALQY*RSLSGSTTCPFLQH
Trigger: GTGTTGGAGGAATGGGCAGGTGGTAGAGCCGGACAAGGACCTCAAGTACTGCAGTGCCAAGGCCCGGCATTGCTGGACCAAGGAGAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS TCA 72 bp AAGAGTGGGGTCCCACCAGGAAACACGGGGATCAGCTaGGGCAGCTCACTAGGCATACCACTGCCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: KSGVPPGNTGIS*GSSLGIPLPGR
Trigger: CCTGCCTGGCAGTGGTATGCCTAGTGAGCTGCCTCAGCTGATCCCCGTGTTTCCTGGTGGGACCCCACTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS TCA 72 bp TGGTCCAGCAATGCCGGGCCTTGGCACTGCAGTACTTaGGGTCCTTGTCCGGCTCTACCACCTGCCCATTCC +
Preference number: 6 (lower is better)
Translates to: WSSNAGPWHCST*GPCPALPPAHS
Trigger: GGAATGGGCAGGTGGTAGAGCCGGACAAGGACCTCAAGTACTGCAGTGCCAAGGCCCGGCATTGCTGGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 72 bp TCTGAGTACTGCTTGGGGGTCGGTGGTCCTGCGAGCTaGTCTCTTCTAGGAAGGAGTCCGGCTTGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: SEYCLGVGGPAS*SLLGRSPACPG
Trigger: CCCTGGACAAGCCGGACTCCTTCCTAGAAGAGACCAGCTCGCAGGACCACCGACCCCCAAGCAGTACTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 72 bp CTCTTGTCCATGGGCACAACGGCACTTGTCTCCGTCTaGGCAGGCCTTGCCCTTCTGGAGCCTGTCACAGAG +
Preference number: 6 (lower is better)
Translates to: LLSMGTTALVSV*AGLALLEPVTE
Trigger: CTCTGTGACAGGCTCCAGAAGGGCAAGGCCTGCCCAGACGGAGACAAGTGCCGTTGTGCCCATGGACAAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp GCCTGCTTGAACTCGTGGGTGGCAGCCAGAGGGTTCTaGATGAGCAGGGTGGTGTTGGGCATTGAGGGCTCC +
Preference number: 6 (lower is better)
Translates to: ACLNSWVAARGF*MSRVVLGIEGS
Trigger: GGAGCCCTCAATGCCCAACACCACCCTGCTCATCAAGAACCCTCTGGCTGCCACCCACGAGTTCAAGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp TCCTTCAGGAGCTTGGCAATGGTGAGGCTGCCACGCTaGACACCCCCTAGAGGGTCAAAGAGCAGGTCCCGG +
Preference number: 6 (lower is better)
Translates to: SFRSLAMVRLPR*TPPRGSKSRSR
Trigger: CCGGGACCTGCTCTTTGACCCTCTAGGGGGTGTCAAGCGTGGCAGCCTCACCATTGCCAAGCTCCTGAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp CACCTCACGCCGGTCCAGCCACTCGTTGAGTTCCTCTaGTCCATGGGCACAACGGCACTTGTCTCCGTCTGG +
Preference number: 6 (lower is better)
Translates to: HLTPVQPLVEFL*SMGTTALVSVW
Trigger: CCAGACGGAGACAAGTGCCGTTGTGCCCATGGACAAGAGGAACTCAACGAGTGGCTGGACCGGCGTGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 90 bp CGAATGGATGGCAGCGGCCTCACGGACACCCATTTCCTCTTGGCCTaGGACATCACCAGAAGGACCCGCCTCTCCTTGGTCCAGCAATGC +
Preference number: 6 (lower is better)
Translates to: RMDGSGLTDTHFLLA*DITRRTRLSLVQQC
Trigger: GCATTGCTGGACCAAGGAGAGGCGGGTCCTTCTGGTGATGTCCAAGGCCAAGAGGAAATGGGTGTCCGTGAGGCCGCTGCCATCCATTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 90 bp TCCAGCCACTCGTTGAGTTCCTCTTGTCCATGGGCACAACGGCACTaGTCTCCGTCTGGGCAGGCCTTGCCCTTCTGGAGCCTGTCACAG +
Preference number: 6 (lower is better)
Translates to: SSHSLSSSCPWAQRH*SPSGQALPFWSLSQ
Trigger: CTGTGACAGGCTCCAGAAGGGCAAGGCCTGCCCAGACGGAGACAAGTGCCGTTGTGCCCATGGACAAGAGGAACTCAACGAGTGGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 90 bp TTGCTTCAGCACCTCACGCCGGTCCAGCCACTCGTTGAGTTCCTCTaGTCCATGGGCACAACGGCACTTGTCTCCGTCTGGGCAGGCCTT +
Preference number: 6 (lower is better)
Translates to: LLQHLTPVQPLVEFL*SMGTTALVSVWAGL
Trigger: AAGGCCTGCCCAGACGGAGACAAGTGCCGTTGTGCCCATGGACAAGAGGAACTCAACGAGTGGCTGGACCGGCGTGAGGTGCTGAAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 90 bp CCGAAGTCATCATCCCGTGGACACAGAAGCATGTCCTTGCGGGCCTaGGCAAGCTTTTGCTTCAGCACCTCACGCCGGTCCAGCCACTCG +
Preference number: 6 (lower is better)
Translates to: PKSSSRGHRSMSLRA*ASFCFSTSRRSSHS
Trigger: CGAGTGGCTGGACCGGCGTGAGGTGCTGAAGCAAAAGCTTGCCAAGGCCCGCAAGGACATGCTTCTGTGTCCACGGGATGATGACTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 72 bp CACAGAAGCATGTCCTTGCGGGCCTTGGCAAGCTTTTaGTTCAGCACCTCACGCCGGTCCAGCCACTCGTTG +
Preference number: 6 (lower is better)
Translates to: HRSMSLRALASF*FSTSRRSSHSL
Trigger: CAACGAGTGGCTGGACCGGCGTGAGGTGCTGAAGCAAAAGCTTGCCAAGGCCCGCAAGGACATGCTTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 72 bp TGCACAGGTAGTAGGAGCCCACAAAGCTGGTTTTGGTaGGCCGCGGCCGGATGCGCTTCCAGATCTGGTTCT +
Preference number: 6 (lower is better)
Translates to: CTGSRSPQSWFW*AAAGCASRSGS
Trigger: AGAACCAGATCTGGAAGCGCATCCGGCCGCGGCCCACCAAAACCAGCTTTGTGGGCTCCTACTACCTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 72 bp CTTTGCACAGGTAGTAGGAGCCCACAAAGCTGGTTTTaGTGGGCCGCGGCCGGATGCGCTTCCAGATCTGGT +
Preference number: 6 (lower is better)
Translates to: LCTGSRSPQSWF*WAAAGCASRSG
Trigger: ACCAGATCTGGAAGCGCATCCGGCCGCGGCCCACCAAAACCAGCTTTGTGGGCTCCTACTACCTGTGCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 72 bp CTTGGGGCACCCAAGCCGCTGCTGGCCTTCCCTGCGTaGGCTTCCATCTGTTGCCAGTATTTCTTGGATTCC +
Preference number: 6 (lower is better)
Translates to: LGAPKPLLAFPA*ASICCQYFLDS
Trigger: GGAATCCAAGAAATACTGGCAACAGATGGAAGCCCACGCAGGGAAGGCCAGCAGCGGCTTGGGTGCCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 72 bp GACCGCACACAAACTTCATCTGCAGGTCAAAAGTGCTaGGTCCGTGTGTCCTTGGGGCACCCAAGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: DRTQTSSAGQKC*VRVSLGHPSRC
Trigger: GCAGCGGCTTGGGTGCCCCAAGGACACACGGACCCAGCACTTTTGACCTGCAGATGAAGTTTGTGTGCGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp AGGAAGGTGAAGATGCCCTGGTGCTCCTTCAGGAGCTaGGCAATGGTGAGGCTGCCACGCTTGACACCCCCT +
Preference number: 6 (lower is better)
Translates to: RKVKMPWCSFRS*AMVRLPRLTPP
Trigger: AGGGGGTGTCAAGCGTGGCAGCCTCACCATTGCCAAGCTCCTGAAGGAGCACCAGGGCATCTTCACCTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp CAATGCCGGGCCTTGGCACTGCAGTACTTGAGGTCCTaGTCCGGCTCTACCACCTGCCCATTCCTCCAACAC +
Preference number: 6 (lower is better)
Translates to: QCRALALQYLRS*SGSTTCPFLQH
Trigger: GTGTTGGAGGAATGGGCAGGTGGTAGAGCCGGACAAGGACCTCAAGTACTGCAGTGCCAAGGCCCGGCATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp TTGGTCCAGCAATGCCGGGCCTTGGCACTGCAGTACTaGAGGTCCTTGTCCGGCTCTACCACCTGCCCATTC +
Preference number: 6 (lower is better)
Translates to: LVQQCRALALQY*RSLSGSTTCPF
Trigger: GAATGGGCAGGTGGTAGAGCCGGACAAGGACCTCAAGTACTGCAGTGCCAAGGCCCGGCATTGCTGGACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp TCGTTGAGTTCCTCTTGTCCATGGGCACAACGGCACTaGTCTCCGTCTGGGCAGGCCTTGCCCTTCTGGAGC +
Preference number: 6 (lower is better)
Translates to: SLSSSCPWAQRH*SPSGQALPFWS
Trigger: GCTCCAGAAGGGCAAGGCCTGCCCAGACGGAGACAAGTGCCGTTGTGCCCATGGACAAGAGGAACTCAACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp TCATCCCGTGGACACAGAAGCATGTCCTTGCGGGCCTaGGCAAGCTTTTGCTTCAGCACCTCACGCCGGTCC +
Preference number: 6 (lower is better)
Translates to: SSRGHRSMSLRA*ASFCFSTSRRS
Trigger: GGACCGGCGTGAGGTGCTGAAGCAAAAGCTTGCCAAGGCCCGCAAGGACATGCTTCTGTGTCCACGGGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 90 bp ATCCCGTGGACACAGAAGCATGTCCTTGCGGGCCTTGGCAAGCTTTaGCTTCAGCACCTCACGCCGGTCCAGCCACTCGTTGAGTTCCTC +
Preference number: 6 (lower is better)
Translates to: IPWTQKHVLAGLGKL*LQHLTPVQPLVEFL
Trigger: GAGGAACTCAACGAGTGGCTGGACCGGCGTGAGGTGCTGAAGCAAAAGCTTGCCAAGGCCCGCAAGGACATGCTTCTGTGTCCACGGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 90 bp ATCTCACAGAGGAAGGTGAAGATGCCCTGGTGCTCCTTCAGGAGCTaGGCAATGGTGAGGCTGCCACGCTTGACACCCCCTAGAGGGTCA +
Preference number: 6 (lower is better)
Translates to: ISQRKVKMPWCSFRS*AMVRLPRLTPPRGS
Trigger: TGACCCTCTAGGGGGTGTCAAGCGTGGCAGCCTCACCATTGCCAAGCTCCTGAAGGAGCACCAGGGCATCTTCACCTTCCTCTGTGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 90 bp AAGTTTCGAATGGATGGCAGCGGCCTCACGGACACCCATTTCCTCTaGGCCTTGGACATCACCAGAAGGACCCGCCTCTCCTTGGTCCAG +
Preference number: 6 (lower is better)
Translates to: KFRMDGSGLTDTHFL*ALDITRRTRLSLVQ
Trigger: CTGGACCAAGGAGAGGCGGGTCCTTCTGGTGATGTCCAAGGCCAAGAGGAAATGGGTGTCCGTGAGGCCGCTGCCATCCATTCGAAACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 72 bp ACTGACCGCACACAAACTTCATCTGCAGGTCAAAAGTaGTGGGTCCGTGTGTCCTTGGGGCACCCAAGCCGC +
Preference number: 6 (lower is better)
Translates to: TDRTQTSSAGQK*WVRVSLGHPSR
Trigger: GCGGCTTGGGTGCCCCAAGGACACACGGACCCAGCACTTTTGACCTGCAGATGAAGTTTGTGTGCGGTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 72 bp TCATGTCTTTGCACAGGTAGTAGGAGCCCACAAAGCTaGTTTTGGTGGGCCGCGGCCGGATGCGCTTCCAGA +
Preference number: 6 (lower is better)
Translates to: SCLCTGSRSPQS*FWWAAAGCASR
Trigger: TCTGGAAGCGCATCCGGCCGCGGCCCACCAAAACCAGCTTTGTGGGCTCCTACTACCTGTGCAAAGACATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 72 bp CCGAGAGCTGATGGGGGTCCCTTCTCCCGGCTTCCCTaGGTTGTGTTTCTTCAGCCACATGTCATAGGTCTG +
Preference number: 6 (lower is better)
Translates to: PRADGGPFSRLP*VVFLQPHVIGL
Trigger: CAGACCTATGACATGTGGCTGAAGAAACACAACCCAGGGAAGCCGGGAGAAGGGACCCCCATCAGCTCTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp TTGGCAGCCAGGTTGGAGCAGACAGATGGAGAGTCCTaGGTCCCTTTGCTGATGATCCGGGGCTTGCTGTCG +
Preference number: 6 (lower is better)
Translates to: LAARLEQTDGES*VPLLMIRGLLS
Trigger: CGACAGCAAGCCCCGGATCATCAGCAAAGGGACCAAGGACTCTCCATCTGTCTGCTCCAACCTGGCTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 90 bp TTGGCAGCCAGGTTGGAGCAGACAGATGGAGAGTCCTTGGTCCCTTaGCTGATGATCCGGGGCTTGCTGTCGAAGCAGATCTCACAGAGG +
Preference number: 6 (lower is better)
Translates to: LAARLEQTDGESLVP*LMIRGLLSKQISQR
Trigger: CCTCTGTGAGATCTGCTTCGACAGCAAGCCCCGGATCATCAGCAAAGGGACCAAGGACTCTCCATCTGTCTGCTCCAACCTGGCTGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 90 bp AAGCTGTGCTTGGCAGCCAGGTTGGAGCAGACAGATGGAGAGTCCTaGGTCCCTTTGCTGATGATCCGGGGCTTGCTGTCGAAGCAGATC +
Preference number: 6 (lower is better)
Translates to: KLCLAARLEQTDGES*VPLLMIRGLLSKQI
Trigger: GATCTGCTTCGACAGCAAGCCCCGGATCATCAGCAAAGGGACCAAGGACTCTCCATCTGTCTGCTCCAACCTGGCTGCCAAGCACAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 90 bp TTGGCAAGCTTTTGCTTCAGCACCTCACGCCGGTCCAGCCACTCGTaGAGTTCCTCTTGTCCATGGGCACAACGGCACTTGTCTCCGTCT +
Preference number: 6 (lower is better)
Translates to: LASFCFSTSRRSSHS*SSSCPWAQRHLSPS
Trigger: AGACGGAGACAAGTGCCGTTGTGCCCATGGACAAGAGGAACTCAACGAGTGGCTGGACCGGCGTGAGGTGCTGAAGCAAAAGCTTGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 90 bp GTGGCACCAGTGGTGTCCCCGTCCTCTTGCAGCAGGAAGTTGTATTaGCCGAAGTCATCATCCCGTGGACACAGAAGCATGTCCTTGCGG +
Preference number: 6 (lower is better)
Translates to: VAPVVSPSSCSRKLY*PKSSSRGHRSMSLR
Trigger: CCGCAAGGACATGCTTCTGTGTCCACGGGATGATGACTTCGGCAAATACAACTTCCTGCTGCAAGAGGACGGGGACACCACTGGTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 90 bp TCTGGGGTGGCACCAGTGGTGTCCCCGTCCTCTTGCAGCAGGAAGTaGTATTTGCCGAAGTCATCATCCCGTGGACACAGAAGCATGTCC +
Preference number: 6 (lower is better)
Translates to: SGVAPVVSPSSCSRK*YLPKSSSRGHRSMS
Trigger: GGACATGCTTCTGTGTCCACGGGATGATGACTTCGGCAAATACAACTTCCTGCTGCAAGAGGACGGGGACACCACTGGTGCCACCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS TCA 72 bp TGGCGGCACACGTCAAACTGGAAGTGCTCCTGGAACTaGCGGATCTTGGAGTACTTGAGAGAGGTGGAGCGG +
Preference number: 6 (lower is better)
Translates to: WRHTSNWKCSWN*RILEYLREVER
Trigger: CCGCTCCACCTCTCTCAAGTACTCCAAGATCCGTCAGTTCCAGGAGCACTTCCAGTTTGACGTGTGCCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS TCA 72 bp TTTGCTTCAGCACCTCACGCCGGTCCAGCCACTCGTTaGGTTCCTCTTGTCCATGGGCACAACGGCACTTGT +
Preference number: 6 (lower is better)
Translates to: FASAPHAGPATR*VPLVHGHNGTC
Trigger: ACAAGTGCCGTTGTGCCCATGGACAAGAGGAACTCAACGAGTGGCTGGACCGGCGTGAGGTGCTGAAGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 72 bp AAAGCTGTGCTTGGCAGCCAGGTTGGAGCAGACAGATaGAGAGTCCTTGGTCCCTTTGCTGATGATCCGGGG +
Preference number: 6 (lower is better)
Translates to: KAVLGSQVGADR*RVLGPFADDPG
Trigger: CCCCGGATCATCAGCAAAGGGACCAAGGACTCTCCATCTGTCTGCTCCAACCTGGCTGCCAAGCACAGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 72 bp TGCTGCAGCAACCAGACCTTGAGCTCAATGAAACTATaGGCGAAGTGGCAGCTGTCCTCGCGCAGGCAACCA +
Preference number: 6 (lower is better)
Translates to: CCSNQTLSSMKL*AKWQLSSRRQP
Trigger: TGGTTGCCTGCGCGAGGACAGCTGCCACTTCGCCCATAGTTTCATTGAGCTCAAGGTCTGGTTGCTGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp TTTTGCTTCAGCACCTCACGCCGGTCCAGCCACTCGTaGAGTTCCTCTTGTCCATGGGCACAACGGCACTTG +
Preference number: 6 (lower is better)
Translates to: FCFSTSRRSSHS*SSSCPWAQRHL
Trigger: CAAGTGCCGTTGTGCCCATGGACAAGAGGAACTCAACGAGTGGCTGGACCGGCGTGAGGTGCTGAAGCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 90 bp GGCACCCAAGCCGCTGCTGGCCTTCCCTGCGTGGGCTTCCATCTGTaGCCAGTATTTCTTGGATTCCTGAACGATGTCTTCATGGGTCAT +
Preference number: 6 (lower is better)
Translates to: GTQAAAGLPCVGFHL*PVFLGFLNDVFMGH
Trigger: ATGACCCATGAAGACATCGTTCAGGAATCCAAGAAATACTGGCAACAGATGGAAGCCCACGCAGGGAAGGCCAGCAGCGGCTTGGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 90 bp TTGTATTTGCCGAAGTCATCATCCCGTGGACACAGAAGCATGTCCTaGCGGGCCTTGGCAAGCTTTTGCTTCAGCACCTCACGCCGGTCC +
Preference number: 6 (lower is better)
Translates to: LYLPKSSSRGHRSMS*RALASFCFSTSRRS
Trigger: GGACCGGCGTGAGGTGCTGAAGCAAAAGCTTGCCAAGGCCCGCAAGGACATGCTTCTGTGTCCACGGGATGATGACTTCGGCAAATACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS TCA 72 bp GGTCGTTGCCCTCGGCAAACAGGTTCTGCACAAGCTTaGGCAGGAAAGCCTCATACTCCTCTTGCTTCAGGG +
Preference number: 6 (lower is better)
Translates to: GRCPRQTGSAQA*AGKPHTPLASG
Trigger: CCCTGAAGCAAGAGGAGTATGAGGCTTTCCTGCTCAAGCTTGTGCAGAACCTGTTTGCCGAGGGCAACGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 72 bp TCCTCTTGCTTCAGGGGTAGTGTTGACTGGATGAACTaGAGCCCCTTCTCGATGTCCGCCTTCCGTTTCTGC +
Preference number: 6 (lower is better)
Translates to: SSCFRGSVDWMN*SPFSMSAFRFC
Trigger: GCAGAAACGGAAGGCGGACATCGAGAAGGGGCTGCAGTTCATCCAGTCAACACTACCCCTGAAGCAAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000109554.3
ENSMUST00000230946.2
CDS GCA 72 bp CAGACTGAATGTGCTGCTGCCACTGTTTCTTGCTGTTaGTGTTCTTGCCGCAGAGCCAGCAGTGGTAGCCCA +
Preference number: 6 (lower is better)
Translates to: QTECAAATVSCC*CSCRRASSGSP
Trigger: TGGGCTACCACTGCTGGCTCTGCGGCAAGAACAGCAACAGCAAGAAACAGTGGCAGCAGCACATTCAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 72 bp GAGCCTGCTTGTAGTCCTTCTCCCGGAACAGGTCGTTaGCCTCGGCAAACAGGTTCTGCACAAGCTCATACT +
Preference number: 6 (lower is better)
Translates to: EPACSPSPGTGR*PRQTGSAQAHT
Trigger: AGTATGAGCTTGTGCAGAACCTGTTTGCCGAGGGCAACGACCTGTTCCGGGAGAAGGACTACAAGCAGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000230946.2
CDS CAA 72 bp AGGTTGGAGCAGACAGATGGAGAGTCCTTGGTCCCTTaGCTGATGATCCGGGGCTTGCTGTCGAAGCAGATC +
Preference number: 6 (lower is better)
Translates to: RLEQTDGESLVP*LMIRGLLSKQI
Trigger: GATCTGCTTCGACAGCAAGCCCCGGATCATCAGCAAAGGGACCAAGGACTCTCCATCTGTCTGCTCCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp GCCGCTGCTGGCCTTCCCTGCGTGGGCTTCCATCTGTaGCCAGTATTTCTTGGATTCCTGAACGATGTCTTC +
Preference number: 6 (lower is better)
Translates to: AAAGLPCVGFHL*PVFLGFLNDVF
Trigger: GAAGACATCGTTCAGGAATCCAAGAAATACTGGCAACAGATGGAAGCCCACGCAGGGAAGGCCAGCAGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp CCGAAGTCATCATCCCGTGGACACAGAAGCATGTCCTaGCGGGCCTTGGCAAGCTTTTGCTTCAGCACCTCA +
Preference number: 6 (lower is better)
Translates to: PKSSSRGHRSMS*RALASFCFSTS
Trigger: TGAGGTGCTGAAGCAAAAGCTTGCCAAGGCCCGCAAGGACATGCTTCTGTGTCCACGGGATGATGACTTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp GCACCAGTGGTGTCCCCGTCCTCTTGCAGCAGGAAGTaGTATTTGCCGAAGTCATCATCCCGTGGACACAGA +
Preference number: 6 (lower is better)
Translates to: APVVSPSSCSRK*YLPKSSSRGHR
Trigger: TCTGTGTCCACGGGATGATGACTTCGGCAAATACAACTTCCTGCTGCAAGAGGACGGGGACACCACTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 72 bp CAGCAGGAAGTTGTATTTGCCGAAGTCATCATCCCGTaGACACAGAAGCATGTCCTTGCGGGCCTTGGCAAG +
Preference number: 6 (lower is better)
Translates to: QQEVVFAEVIIP*TQKHVLAGLGK
Trigger: CTTGCCAAGGCCCGCAAGGACATGCTTCTGTGTCCACGGGATGATGACTTCGGCAAATACAACTTCCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp AGGTCGTTGCCCTCGGCAAACAGGTTCTGCACAAGCTaGAGCAGGAAAGCCTCATACTCCTCTTGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: RSLPSANRFCTS*SRKASYSSCFR
Trigger: CCTGAAGCAAGAGGAGTATGAGGCTTTCCTGCTCAAGCTTGTGCAGAACCTGTTTGCCGAGGGCAACGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp GTGGTGTCCCCGTCCTCTTGCAGCAGGAAGTTGTATTaGCCGAAGTCATCATCCCGTGGACACAGAAGCATG +
Preference number: 6 (lower is better)
Translates to: VVSPSSCSRKLY*PKSSSRGHRSM
Trigger: CATGCTTCTGTGTCCACGGGATGATGACTTCGGCAAATACAACTTCCTGCTGCAAGAGGACGGGGACACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 72 bp TGGTGTCCCCGTCCTCTTGCAGCAGGAAGTTGTATTTaGCGAAGTCATCATCCCGTGGACACAGAAGCATGT +
Preference number: 6 (lower is better)
Translates to: WCPRPLAAGSCI*RSHHPVDTEAC
Trigger: ACATGCTTCTGTGTCCACGGGATGATGACTTCGGCAAATACAACTTCCTGCTGCAAGAGGACGGGGACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 72 bp TGTGCACCAGGCACTTGTTGTTGTAAAAGCTGTGCTTaGCAGCCAGGTTGGAGCAGACAGATGGAGAGTCCT +
Preference number: 6 (lower is better)
Translates to: CAPGTCCCKSCA*QPGWSRQMESP
Trigger: AGGACTCTCCATCTGTCTGCTCCAACCTGGCTGCCAAGCACAGCTTTTACAACAACAAGTGCCTGGTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS TCA 72 bp AGGTCTGTTGCATATCCAGGATCTTGTTCTCCTTCATaGAGGTCCACATGTCCCTCTCCTCAGGGCTGTGTG +
Preference number: 6 (lower is better)
Translates to: RSVAYPGSCSPS*RSTCPSPQGCV
Trigger: CACACAGCCCTGAGGAGAGGGACATGTGGACCTTCATGAAGGAGAACAAGATCCTGGATATGCAACAGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 72 bp TCGGCAAACAGGTTCTGCACAAGCTCATACTCCTCTTaGTTCAGGGGTAGTGTTGACTGGATGAACTGCAGC +
Preference number: 6 (lower is better)
Translates to: SANRFCTSSYSS*FRGSVDWMNCS
Trigger: GCTGCAGTTCATCCAGTCAACACTACCCCTGAAGCAAGAGGAGTATGAGCTTGTGCAGAACCTGTTTGCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000230946.2
CDS CCA 72 bp ACTTGTTGTTGTAAAAGCTGTGCTTGGCAGCCAGGTTaGAGCAGACAGATGGAGAGTCCTTGGTCCCTTTGC +
Preference number: 6 (lower is better)
Translates to: TCCCKSCAWQPG*SRQMESPWSLC
Trigger: GCAAAGGGACCAAGGACTCTCCATCTGTCTGCTCCAACCTGGCTGCCAAGCACAGCTTTTACAACAACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS GCA 72 bp TGTGTGCGAAGGAGCAGTTCCCCACATACTGGCATTTaGGGCCGTTCTGGGCATGAATACATAGGTCATATT +
Preference number: 6 (lower is better)
Translates to: CVRRSSSPHTGI*GRSGHEYIGHI
Trigger: AATATGACCTATGTATTCATGCCCAGAACGGCCGCAAATGCCAGTATGTGGGGAACTGCTCCTTCGCACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CCA 72 bp GAATACATAGGTCATATTGCTGTGGGAAGTTTCGAATaGATGGCAGCGGCCTCACGGACACCCATTTCCTCT +
Preference number: 6 (lower is better)
Translates to: EYIGHIAVGSFE*MAAASRTPISS
Trigger: AGAGGAAATGGGTGTCCGTGAGGCCGCTGCCATCCATTCGAAACTTCCCACAGCAATATGACCTATGTATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS TCA 72 bp TTCCCCACATACTGGCATTTGCGGCCGTTCTGGGCATaGATACATAGGTCATATTGCTGTGGGAAGTTTCGA +
Preference number: 6 (lower is better)
Translates to: FPTYWHLRPFWA*IHRSYCCGKFR
Trigger: TCGAAACTTCCCACAGCAATATGACCTATGTATTCATGCCCAGAACGGCCGCAAATGCCAGTATGTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS TCA 72 bp TGGGCTTCCATCTGTTGCCAGTATTTCTTGGATTCCTaGACGATGTCTTCATGGGTCATTCCTGAGTACTGC +
Preference number: 6 (lower is better)
Translates to: WASICCQYFLDS*TMSSWVIPEYC
Trigger: GCAGTACTCAGGAATGACCCATGAAGACATCGTTCAGGAATCCAAGAAATACTGGCAACAGATGGAAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS TCA 72 bp ATGTCATCTATAGATCCCAATCCGTTAGAAGTTCCCTaGTCTGTTAAGCCAGCTGGAGCGCCATTACTAAGC +
Preference number: 6 (lower is better)
Translates to: MSSIDPNPLEVP*SVKPAGAPLLS
Trigger: GCTTAGTAATGGCGCTCCAGCTGGCTTAACAGATCAGGGAACTTCTAACGGATTGGGATCTATAGATGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp GTAGGCGAAGGTGCAGTTATCCCCGTACTTACAGTCTaGCTTGTTAATCATGTCTTTGCACAGGTAGTAGGA +
Preference number: 6 (lower is better)
Translates to: VGEGAVIPVLTV*LVNHVFAQVVG
Trigger: TCCTACTACCTGTGCAAAGACATGATTAACAAGCAAGACTGTAAGTACGGGGATAACTGCACCTTCGCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3
CDS CAA 72 bp TGGGTTGTGTTTCTTCAGCCACATGTCATAGGTCTGTaGCATATCCAGGATCTTGTTCTCCTTCATGAAGGT +
Preference number: 6 (lower is better)
Translates to: WVVFLQPHVIGL*HIQDLVLLHEG
Trigger: ACCTTCATGAAGGAGAACAAGATCCTGGATATGCAACAGACCTATGACATGTGGCTGAAGAAACACAACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000109554.3