Pregenerated sensors for ZC3H7A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037965Ensembl transcript IDs: ENSMUST00000037633.16, ENSMUST00000125537.9, ENSMUST00000128083.9, ENSMUST00000130355.9, ENSMUST00000138185.9, ENSMUST00000140755.9, ENSMUST00000140898.8, ENSMUST00000142389.3
Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCCCAGCACACCTCATCCGAGCTTCTGTCCAACAGACAGCAACCTaGCAGCAAGTCCCTTCGCCATCTGATGCCAGTGGCTCCGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: SPAHLIRASVQQTAT*QQVPSPSDASGSAR Trigger: TCTTGCGGAGCCACTGGCATCAGATGGCGAAGGGACTTGCTGCCAGGTTGCTGTCTGTTGGACAGAAGCTCGGATGAGGTGTGCTGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| 3UTR TCA 90 bp | TTCTGTCCAACAGACAGCAACCTGGCAGCAAGTCCCTTCGCCATCTaGTGCCAGTGGCTCCGCAAGAGCTTAGCCAGGCCTGTCAAACAG | + |
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Preference number: 1 (lower is better) Translates to: FCPTDSNLAASPFAI*CQWLRKSLARPVKQ Trigger: CTGTTTGACAGGCCTGGCTAAGCTCTTGCGGAGCCACTGGCATCAGATGGCGAAGGGACTTGCTGCCAGGTTGCTGTCTGTTGGACAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| 3UTR TCA 90 bp | CATGTACTCCGATCCCACTGTGCATTACACTCACTGCTGTGGCTCTaGCCTCAGAGTCATCCTCAACCTTACCCCTTCCCCAGCACACCT | + |
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Preference number: 1 (lower is better) Translates to: HVLRSHCALHSLLWL*PQSHPQPYPFPSTP Trigger: AGGTGTGCTGGGGAAGGGGTAAGGTTGAGGATGACTCTGAGGTCAGAGCCACAGCAGTGAGTGTAATGCACAGTGGGATCGGAGTACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| 3UTR TCA 90 bp | GGTGTTCCCTCTCTAGCAGTTGAGGTGCACAGATATTCAAGCAACTaGGAAGACGCCTCCTCTCTGACCCTAAGCAGCAGGAGCTCACGG | + |
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Preference number: 1 (lower is better) Translates to: GVPSLAVEVHRYSSN*EDASSLTLSSRSSR Trigger: CCGTGAGCTCCTGCTGCTTAGGGTCAGAGAGGAGGCGTCTTCTCAGTTGCTTGAATATCTGTGCACCTCAACTGCTAGAGAGGGAACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR GCA 90 bp | CAGATCTGGCAAGCTTGCCTCAGCTCGTGGGTTCCTTCGAGGGGATaGCTAGGAGTCCCTGATGAAAATGGTTTAGCGATCACACTTCCA | + |
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Preference number: 1 (lower is better) Translates to: QIWQACLSSWVPSRG*LGVPDENGLAITLP Trigger: TGGAAGTGTGATCGCTAAACCATTTTCATCAGGGACTCCTAGGCATCCCCTCGAAGGAACCCACGAGCTGAGGCAAGCTTGCCAGATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR GCA 90 bp | TCCATTAACTTAGGGCCTGATTTTACAAAGCAGATCTGGCAAGCTTaGCTCAGCTCGTGGGTTCCTTCGAGGGGATGCCTAGGAGTCCCT | + |
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Preference number: 1 (lower is better) Translates to: SINLGPDFTKQIWQA*LSSWVPSRGCLGVP Trigger: AGGGACTCCTAGGCATCCCCTCGAAGGAACCCACGAGCTGAGGCAAGCTTGCCAGATCTGCTTTGTAAAATCAGGCCCTAAGTTAATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR GCA 90 bp | AGCCAGGCCTGTCAAACAGCCTTTTTCCTATCTACTGTGGGTTGCTaGTCAGGAGGAACGATAGATGCCAATCAAGCAGAAATCTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: SQACQTAFFLSTVGC*SGGTIDANQAEICS Trigger: GCTGCAGATTTCTGCTTGATTGGCATCTATCGTTCCTCCTGAGCAGCAACCCACAGTAGATAGGAAAAAGGCTGTTTGACAGGCCTGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| 3UTR GCA 90 bp | CTTTTTCCTATCTACTGTGGGTTGCTGCTCAGGAGGAACGATAGATaGCAATCAAGCAGAAATCTGCAGCTCTTCTGCTGTGTGCCTCTC | + |
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Preference number: 1 (lower is better) Translates to: LFPIYCGLLLRRNDR*QSSRNLQLFCCVPL Trigger: GAGAGGCACACAGCAGAAGAGCTGCAGATTTCTGCTTGATTGGCATCTATCGTTCCTCCTGAGCAGCAACCCACAGTAGATAGGAAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| 3UTR GCA 90 bp | CTTAGCCAGGCCTGTCAAACAGCCTTTTTCCTATCTACTGTGGGTTaGTGCTCAGGAGGAACGATAGATGCCAATCAAGCAGAAATCTGC | + |
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Preference number: 1 (lower is better) Translates to: LSQACQTAFFLSTVG*CSGGTIDANQAEIC Trigger: GCAGATTTCTGCTTGATTGGCATCTATCGTTCCTCCTGAGCAGCAACCCACAGTAGATAGGAAAAAGGCTGTTTGACAGGCCTGGCTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| 3UTR TCA 90 bp | AAGGGAGGAATTACTGTTGTTAAGCGGTGTTCCCTCTCTAGCAGTTaGGGTGCACAGATATTCAAGCAACTGAGAAGACGCCTCCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: KGGITVVKRCSLSSS*GAQIFKQLRRRLLS Trigger: AGAGAGGAGGCGTCTTCTCAGTTGCTTGAATATCTGTGCACCTCAACTGCTAGAGAGGGAACACCGCTTAACAACAGTAATTCCTCCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR GCA 90 bp | GGTTGCTGCTCAGGAGGAACGATAGATGCCAATCAAGCAGAAATCTaGAGCTCTTCTGCTGTGTGCCTCTCAACACTTGCAATTTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: GCCSGGTIDANQAEI*SSSAVCLSTLAIFL Trigger: CAGAAAAATTGCAAGTGTTGAGAGGCACACAGCAGAAGAGCTGCAGATTTCTGCTTGATTGGCATCTATCGTTCCTCCTGAGCAGCAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| 3UTR GCA 90 bp | ACGGATGTTCATCCACTTCTTACGTTCAAAAGACATCGCTCTCATTaGACGACGTTCTTTGGTCCACGAATGCTGTGCTTTGGCACTGCA | + |
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Preference number: 1 (lower is better) Translates to: TDVHPLLTFKRHRSH*TTFFGPRMLCFGTA Trigger: TGCAGTGCCAAAGCACAGCATTCGTGGACCAAAGAACGTCGTGCAATGAGAGCGATGTCTTTTGAACGTAAGAAGTGGATGAACATCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR GCA 90 bp | AGGAGGAACGATAGATGCCAATCAAGCAGAAATCTGCAGCTCTTCTaGTGTGTGCCTCTCAACACTTGCAATTTTTCTGGTCAGTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: RRNDRCQSSRNLQLF*CVPLNTCNFSGQCS Trigger: AGAGCACTGACCAGAAAAATTGCAAGTGTTGAGAGGCACACAGCAGAAGAGCTGCAGATTTCTGCTTGATTGGCATCTATCGTTCCTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| 3UTR CCA 90 bp | CCACGAATGCTGTGCTTTGGCACTGCAGTACTTTCTGTTCCTGTCTaGTTCAATGACTTGGCCATTTCTCAGACACTGAGCACATACAAA | + |
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Preference number: 1 (lower is better) Translates to: PRMLCFGTAVLSVPV*FNDLAISQTLSTYK Trigger: TTTGTATGTGCTCAGTGTCTGAGAAATGGCCAAGTCATTGAACCAGACAGGAACAGAAAGTACTGCAGTGCCAAAGCACAGCATTCGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR CCA 90 bp | ACTTCTTACGTTCAAAAGACATCGCTCTCATTGCACGACGTTCTTTaGTCCACGAATGCTGTGCTTTGGCACTGCAGTACTTTCTGTTCC | + |
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Preference number: 1 (lower is better) Translates to: TSYVQKTSLSLHDVL*STNAVLWHCSTFCS Trigger: GGAACAGAAAGTACTGCAGTGCCAAAGCACAGCATTCGTGGACCAAAGAACGTCGTGCAATGAGAGCGATGTCTTTTGAACGTAAGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR GCA 90 bp | AAAACACATAAGGAATTTCATCCATCATGTACTCCGATCCCACTGTaGATTACACTCACTGCTGTGGCTCTGACCTCAGAGTCATCCTCA | + |
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Preference number: 1 (lower is better) Translates to: KTHKEFHPSCTPIPL*ITLTAVALTSESSS Trigger: TGAGGATGACTCTGAGGTCAGAGCCACAGCAGTGAGTGTAATGCACAGTGGGATCGGAGTACATGATGGATGAAATTCCTTATGTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| 3UTR GCA 90 bp | GTAATCCAGGCATTATTTGATTACCAAGGACCTGCACTCCCGGCATaGTTGCTTGCAAACTTCTCCAATATTGTTTGGATTGTTGAGCAA | + |
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Preference number: 1 (lower is better) Translates to: VIQALFDYQGPALPA*LLANFSNIVWIVEQ Trigger: TTGCTCAACAATCCAAACAATATTGGAGAAGTTTGCAAGCAAGCATGCCGGGAGTGCAGGTCCTTGGTAATCAAATAATGCCTGGATTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR TCA 90 bp | GCACATACAAACTTTATCTCCATGTTAAGTAATCCAGGCATTATTTaGTTACCAAGGACCTGCACTCCCGGCATGCTTGCTTGCAAACTT | + |
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Preference number: 1 (lower is better) Translates to: AHTNFISMLSNPGII*LPRTCTPGMLACKL Trigger: AAGTTTGCAAGCAAGCATGCCGGGAGTGCAGGTCCTTGGTAATCAAATAATGCCTGGATTACTTAACATGGAGATAAAGTTTGTATGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR CCA 90 bp | ATGTATTTTGTTATCCTTCATGTAAGTCCACACTTCCCGCTCCTCTaGACTATGAGCAAAGGAACAGTTGCCAACATACTGACACTTTTT | + |
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Preference number: 1 (lower is better) Translates to: MYFVILHVSPHFPLL*TMSKGTVANILTLF Trigger: AAAAAGTGTCAGTATGTTGGCAACTGTTCCTTTGCTCATAGTCCAGAGGAGCGGGAAGTGTGGACTTACATGAAGGATAACAAAATACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140755.9 ENSMUST00000140898.8 |
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| 3UTR CCA 90 bp | CAATATGGTTGCATAGATCAAACTGTAAAGGCATTTGTTTCTTTGTaGGGAGAGGACGGATGTTCATCCACTTCTTACGTTCAAAAGACA | + |
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Preference number: 1 (lower is better) Translates to: QYGCIDQTVKAFVSL*GEDGCSSTSYVQKT Trigger: TGTCTTTTGAACGTAAGAAGTGGATGAACATCCGTCCTCTCCCCACAAAGAAACAAATGCCTTTACAGTTTGATCTATGCAACCATATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR-3UTR GCA 90 bp | CCCCAGCACACCTCATCCGAGCTTCTGTCCAACAGACAGCAACCTGGCAGCAAGAATCTGCAGCTCTTCTaGTGTGTGCCTCTCAACACT | + |
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Preference number: 2 (lower is better) Translates to: PQHTSSELLSNRQQPGSKNLQLF*CVPLNT Trigger: AGTGTTGAGAGGCACACAGCAGAAGAGCTGCAGATT...CTTGCTGCCAGGTTGCTGTCTGTTGGACAGAAGCTCGGATGAGGTGTGCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| 3UTR-3UTR GCA 90 bp | CGCTCTCATTGCACGACGTTCTTTGGTCCACGAATGCTGTGCTTTGGCACTGCACAGATCTGGCAAGCTTaGCTCAGCTCGTGGGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: RSHCTTFFGPRMLCFGTAQIWQA*LSSWVP Trigger: AGGAACCCACGAGCTGAGGCAAGCTTGCCAGATCTG...TGCAGTGCCAAAGCACAGCATTCGTGGACCAAAGAACGTCGTGCAATGAGAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR-3UTR TCA 90 bp | CGCTCTCATTGCACGACGTTCTTTGGTCCACGAATGCTGTGCTTTGGCACTGCATCCCTCTCTAGCAGTTaGGGTGCACAGATATTCAAG | + |
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Preference number: 2 (lower is better) Translates to: RSHCTTFFGPRMLCFGTASLSSS*GAQIFK Trigger: CTTGAATATCTGTGCACCTCAACTGCTAGAGAGGGA...TGCAGTGCCAAAGCACAGCATTCGTGGACCAAAGAACGTCGTGCAATGAGAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR-3UTR GCA 90 bp | CCCACTGTGCATTACACTCACTGCTGTGGCTCTGACCTCAGAGTCATCCTCAACTCTACTGTGGGTTGCTaGTCAGGAGGAACGATAGAT | + |
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Preference number: 2 (lower is better) Translates to: PTVHYTHCCGSDLRVILNSTVGC*SGGTID Trigger: ATCTATCGTTCCTCCTGAGCAGCAACCCACAGTAGA...GTTGAGGATGACTCTGAGGTCAGAGCCACAGCAGTGAGTGTAATGCACAGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| 3UTR CAA 90 bp | GACGGATGTTCATCCACTTCTTACGTTCAAAAGACATCGCTCTCATaGCACGACGTTCTTTGGTCCACGAATGCTGTGCTTTGGCACTGC | + |
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Preference number: 2 (lower is better) Translates to: DGCSSTSYVQKTSLS*HDVLWSTNAVLWHC Trigger: GCAGTGCCAAAGCACAGCATTCGTGGACCAAAGAACGTCGTGCAATGAGAGCGATGTCTTTTGAACGTAAGAAGTGGATGAACATCCGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR-3UTR TCA 90 bp | ATCCACTTCTTACGTTCAAAAGACATCGCTCTCATTGCACGACGTTCTTTGGTCCAAATTCATGCTTTGTaGCGGGGTGAGAGCAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: IHFLRSKDIALIARRSLVQIHAL*RGESRQ Trigger: CTGCCTGCTCTCACCCCGTCACAAAGCATGAATTTG...GACCAAAGAACGTCGTGCAATGAGAGCGATGTCTTTTGAACGTAAGAAGTGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR-3UTR TCA 90 bp | CGCTCTCATTGCACGACGTTCTTTGGTCCACGAATGCTGTGCTTTGGCACTGCACCATTTCTCAGACACTaGGCACATACAAACTTTATC | + |
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Preference number: 2 (lower is better) Translates to: RSHCTTFFGPRMLCFGTAPFLRH*AHTNFI Trigger: GATAAAGTTTGTATGTGCTCAGTGTCTGAGAAATGG...TGCAGTGCCAAAGCACAGCATTCGTGGACCAAAGAACGTCGTGCAATGAGAGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR-3UTR GCA 90 bp | GAATGCTGTGCTTTGGCACTGCAGTACTTTCTGTTCCTGTCTGGTTCAATGACTAGCCTCTCGACTGAATaGCCCTTTTCTTTCCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: ECCALALQYFLFLSGSMTSLSTE*PFSFQG Trigger: ACCCTGGAAAGAAAAGGGGCATTCAGTCGAGAGGCT...AGTCATTGAACCAGACAGGAACAGAAAGTACTGCAGTGCCAAAGCACAGCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR CAA 90 bp | CACTTCTTACGTTCAAAAGACATCGCTCTCATTGCACGACGTTCTTaGGTCCACGAATGCTGTGCTTTGGCACTGCAGTACTTTCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: HFLRSKDIALIARRS*VHECCALALQYFLF Trigger: GAACAGAAAGTACTGCAGTGCCAAAGCACAGCATTCGTGGACCAAAGAACGTCGTGCAATGAGAGCGATGTCTTTTGAACGTAAGAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR-3UTR CCA 90 bp | TATCCTTCATGTAAGTCCACACTTCCCGCTCCTCTGGACTATGAGCAAAGGAACGCATTTGTTTCTTTGTaGGGAGAGGACGGATGTTCA | + |
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Preference number: 2 (lower is better) Translates to: YPSCKSTLPAPLDYEQRNAFVSL*GEDGCS Trigger: TGAACATCCGTCCTCTCCCCACAAAGAAACAAATGC...GTTCCTTTGCTCATAGTCCAGAGGAGCGGGAAGTGTGGACTTACATGAAGGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR-3UTR TCA 90 bp | GTTCATCCACTTCTTACGTTCAAAAGACATCGCTCTCATTGCACGACGTTCTTTTCCTGTCTGGTTCAATaGCTTGGCCATTTCTCAGAC | + |
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Preference number: 2 (lower is better) Translates to: VHPLLTFKRHRSHCTTFFSCLVQ*LGHFSD Trigger: GTCTGAGAAATGGCCAAGTCATTGAACCAGACAGGA...AAAGAACGTCGTGCAATGAGAGCGATGTCTTTTGAACGTAAGAAGTGGATGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR CAA 90 bp | AGGCATTATTTGATTACCAAGGACCTGCACTCCCGGCATGCTTGCTaGCAAACTTCTCCAATATTGTTTGGATTGTTGAGCAATATCATC | + |
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Preference number: 2 (lower is better) Translates to: RHYLITKDLHSRHAC*QTSPILFGLLSNII Trigger: GATGATATTGCTCAACAATCCAAACAATATTGGAGAAGTTTGCAAGCAAGCATGCCGGGAGTGCAGGTCCTTGGTAATCAAATAATGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR CAA 90 bp | ATCCAGGCATTATTTGATTACCAAGGACCTGCACTCCCGGCATGCTaGCTTGCAAACTTCTCCAATATTGTTTGGATTGTTGAGCAATAT | + |
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Preference number: 2 (lower is better) Translates to: IQALFDYQGPALPAC*LANFSNIVWIVEQY Trigger: ATATTGCTCAACAATCCAAACAATATTGGAGAAGTTTGCAAGCAAGCATGCCGGGAGTGCAGGTCCTTGGTAATCAAATAATGCCTGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR-3UTR GCA 90 bp | ATTCCACTAAAACACATAAGGAATTTCATCCATCATGTACTCCGATCCCACTGTAGCTCTTCTGCTGTGTaGCTCTCAACACTTGCAATT | + |
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Preference number: 2 (lower is better) Translates to: IPLKHIRNFIHHVLRSHCSSSAV*LSTLAI Trigger: AATTGCAAGTGTTGAGAGGCACACAGCAGAAGAGCT...ACAGTGGGATCGGAGTACATGATGGATGAAATTCCTTATGTGTTTTAGTGGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| 3UTR-3UTR GCA 90 bp | GTTCATCCACTTCTTACGTTCAAAAGACATCGCTCTCATTGCACGACGTTCTTTGAGCAAAGGAACAGTTaGCAACATACTGACACTTTT | + |
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Preference number: 2 (lower is better) Translates to: VHPLLTFKRHRSHCTTFFEQRNS*QHTDTF Trigger: AAAAGTGTCAGTATGTTGGCAACTGTTCCTTTGCTC...AAAGAACGTCGTGCAATGAGAGCGATGTCTTTTGAACGTAAGAAGTGGATGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR CAA 90 bp | TCCCGGCATGCTTGCTTGCAAACTTCTCCAATATTGTTTGGATTGTaGAGCAATATCATCATGGGAGATACCTCTTTCACTTTGCATTAT | + |
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Preference number: 2 (lower is better) Translates to: SRHACLQTSPILFGL*SNIIMGDTSFTLHY Trigger: ATAATGCAAAGTGAAAGAGGTATCTCCCATGATGATATTGCTCAACAATCCAAACAATATTGGAGAAGTTTGCAAGCAAGCATGCCGGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR-3UTR GCA 90 bp | GAGACAGACAAATACAGAAAAACCCATTTAACAGACACTAGTGCTAAATGGTTAAGGAGGAACGATAGATaGCAATCAAGCAGAAATCTG | + |
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Preference number: 2 (lower is better) Translates to: ETDKYRKTHLTDTSAKWLRRNDR*QSSRNL Trigger: CAGATTTCTGCTTGATTGGCATCTATCGTTCCTCCT...TAACCATTTAGCACTAGTGTCTGTTAAATGGGTTTTTCTGTATTTGTCTGTCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| 3UTR CCA 72 bp | CACCTCATCCGAGCTTCTGTCCAACAGACAGCAACCTaGCAGCAAGTCCCTTCGCCATCTGATGCCAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: HLIRASVQQTAT*QQVPSPSDASG Trigger: GCCACTGGCATCAGATGGCGAAGGGACTTGCTGCCAGGTTGCTGTCTGTTGGACAGAAGCTCGGATGAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| 3UTR TCA 72 bp | CGATCCCACTGTGCATTACACTCACTGCTGTGGCTCTaGCCTCAGAGTCATCCTCAACCTTACCCCTTCCCC | + |
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Preference number: 3 (lower is better) Translates to: RSHCALHSLLWL*PQSHPQPYPFP Trigger: GGGGAAGGGGTAAGGTTGAGGATGACTCTGAGGTCAGAGCCACAGCAGTGAGTGTAATGCACAGTGGGATCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| 3UTR GCA 72 bp | CAAGCTTGCCTCAGCTCGTGGGTTCCTTCGAGGGGATaGCTAGGAGTCCCTGATGAAAATGGTTTAGCGATC | + |
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Preference number: 3 (lower is better) Translates to: QACLSSWVPSRG*LGVPDENGLAI Trigger: GATCGCTAAACCATTTTCATCAGGGACTCCTAGGCATCCCCTCGAAGGAACCCACGAGCTGAGGCAAGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR CCA 72 bp | TTTACAAAGCAGATCTGGCAAGCTTGCCTCAGCTCGTaGGTTCCTTCGAGGGGATGCCTAGGAGTCCCTGAT | + |
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Preference number: 3 (lower is better) Translates to: FTKQIWQACLSS*VPSRGCLGVPD Trigger: ATCAGGGACTCCTAGGCATCCCCTCGAAGGAACCCACGAGCTGAGGCAAGCTTGCCAGATCTGCTTTGTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR TCA 72 bp | TCTCTAGCAGTTGAGGTGCACAGATATTCAAGCAACTaGGAAGACGCCTCCTCTCTGACCCTAAGCAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: SLAVEVHRYSSN*EDASSLTLSSR Trigger: CCTGCTGCTTAGGGTCAGAGAGGAGGCGTCTTCTCAGTTGCTTGAATATCTGTGCACCTCAACTGCTAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR GCA 72 bp | ATCATGTACTCCGATCCCACTGTGCATTACACTCACTaGTGTGGCTCTGACCTCAGAGTCATCCTCAACCTT | + |
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Preference number: 3 (lower is better) Translates to: IMYSDPTVHYTH*CGSDLRVILNL Trigger: AAGGTTGAGGATGACTCTGAGGTCAGAGCCACAGCAGTGAGTGTAATGCACAGTGGGATCGGAGTACATGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| 3UTR GCA 72 bp | TCTCATTGCACGACGTTCTTTGGTCCACGAATGCTGTaGTTTGGCACTGCAGTACTTTCTGTTCCTGTCTGG | + |
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Preference number: 3 (lower is better) Translates to: SHCTTFFGPRML*FGTAVLSVPVW Trigger: CCAGACAGGAACAGAAAGTACTGCAGTGCCAAAGCACAGCATTCGTGGACCAAAGAACGTCGTGCAATGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR GCA 72 bp | ATCGCTCTCATTGCACGACGTTCTTTGGTCCACGAATaGTGTGCTTTGGCACTGCAGTACTTTCTGTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: IALIARRSLVHE*CALALQYFLFL Trigger: CAGGAACAGAAAGTACTGCAGTGCCAAAGCACAGCATTCGTGGACCAAAGAACGTCGTGCAATGAGAGCGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR CCA 72 bp | TCCATTAACTTAGGGCCTGATTTTACAAAGCAGATCTaGCAAGCTTGCCTCAGCTCGTGGGTTCCTTCGAGG | + |
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Preference number: 3 (lower is better) Translates to: SINLGPDFTKQI*QACLSSWVPSR Trigger: CCTCGAAGGAACCCACGAGCTGAGGCAAGCTTGCCAGATCTGCTTTGTAAAATCAGGCCCTAAGTTAATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| 3UTR GCA 72 bp | ATCTACTGTGGGTTGCTGCTCAGGAGGAACGATAGATaGCAATCAAGCAGAAATCTGCAGCTCTTCTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: IYCGLLLRRNDR*QSSRNLQLFCC Trigger: ACAGCAGAAGAGCTGCAGATTTCTGCTTGATTGGCATCTATCGTTCCTCCTGAGCAGCAACCCACAGTAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| 3UTR GCA 72 bp | GCCTGTCAAACAGCCTTTTTCCTATCTACTGTGGGTTaGTGCTCAGGAGGAACGATAGATGCCAATCAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ACQTAFFLSTVG*CSGGTIDANQA Trigger: TGCTTGATTGGCATCTATCGTTCCTCCTGAGCAGCAACCCACAGTAGATAGGAAAAAGGCTGTTTGACAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| 3UTR CCA 72 bp | CTGTGCTTTGGCACTGCAGTACTTTCTGTTCCTGTCTaGTTCAATGACTTGGCCATTTCTCAGACACTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LCFGTAVLSVPV*FNDLAISQTLS Trigger: GCTCAGTGTCTGAGAAATGGCCAAGTCATTGAACCAGACAGGAACAGAAAGTACTGCAGTGCCAAAGCACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| 3UTR CCA 72 bp | TTGCACGACGTTCTTTGGTCCACGAATGCTGTGCTTTaGCACTGCAGTACTTTCTGTTCCTGTCTGGTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LHDVLWSTNAVL*HCSTFCSCLVQ Trigger: TTGAACCAGACAGGAACAGAAAGTACTGCAGTGCCAAAGCACAGCATTCGTGGACCAAAGAACGTCGTGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| 3UTR-3UTR CAA 90 bp | TACTGTGGGTTGCTGCTCAGGAGGAACGATAGATGCCAATCAAGCAGAAATCTGTGTGCCTCTCAACACTaGCAATTTTTCTGGTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: YCGLLLRRNDRCQSSRNLCASQH*QFFWSV Trigger: CACTGACCAGAAAAATTGCAAGTGTTGAGAGGCACA...CAGATTTCTGCTTGATTGGCATCTATCGTTCCTCCTGAGCAGCAACCCACAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| 3UTR CCA 72 bp | GTTATCCTTCATGTAAGTCCACACTTCCCGCTCCTCTaGACTATGAGCAAAGGAACAGTTGCCAACATACTG | + |
|
Preference number: 3 (lower is better) Translates to: VILHVSPHFPLL*TMSKGTVANIL Trigger: CAGTATGTTGGCAACTGTTCCTTTGCTCATAGTCCAGAGGAGCGGGAAGTGTGGACTTACATGAAGGATAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140755.9 ENSMUST00000140898.8 |
||
| 3UTR TCA 72 bp | ATTACTGTTGTTAAGCGGTGTTCCCTCTCTAGCAGTTaGGGTGCACAGATATTCAAGCAACTGAGAAGACGC | + |
|
Preference number: 3 (lower is better) Translates to: ITVVKRCSLSSS*GAQIFKQLRRR Trigger: GCGTCTTCTCAGTTGCTTGAATATCTGTGCACCTCAACTGCTAGAGAGGGAACACCGCTTAACAACAGTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| 3UTR TCA 72 bp | TGGCACTGCAGTACTTTCTGTTCCTGTCTGGTTCAATaGCTTGGCCATTTCTCAGACACTGAGCACATACAA | + |
|
Preference number: 3 (lower is better) Translates to: WHCSTFCSCLVQ*LGHFSDTEHIQ Trigger: TTGTATGTGCTCAGTGTCTGAGAAATGGCCAAGTCATTGAACCAGACAGGAACAGAAAGTACTGCAGTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| 3UTR GCA 72 bp | TGTCAAACAGCCTTTTTCCTATCTACTGTGGGTTGCTaGTCAGGAGGAACGATAGATGCCAATCAAGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: CQTAFFLSTVGC*SGGTIDANQAE Trigger: TTCTGCTTGATTGGCATCTATCGTTCCTCCTGAGCAGCAACCCACAGTAGATAGGAAAAAGGCTGTTTGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| 3UTR GCA 72 bp | CATCCACTTCTTACGTTCAAAAGACATCGCTCTCATTaGACGACGTTCTTTGGTCCACGAATGCTGTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: HPLLTFKRHRSH*TTFFGPRMLCF Trigger: AAAGCACAGCATTCGTGGACCAAAGAACGTCGTGCAATGAGAGCGATGTCTTTTGAACGTAAGAAGTGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTCATCCACTTCTTACGTTCAAAAGACATCGCTCTCATTGCACGACGTTCTTTAGGGAGGAATTACTGTaGTTAAGCGGTGTTCCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: VHPLLTFKRHRSHCTTFFREELL*LSGVPS Trigger: AGAGGGAACACCGCTTAACAACAGTAATTCCTCCCT...AAAGAACGTCGTGCAATGAGAGCGATGTCTTTTGAACGTAAGAAGTGGATGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTCATCCACTTCTTACGTTCAAAAGACATCGCTCTCATTGCACGACGTTCTTTGTCTGGTTCAATGACTaGGCCATTTCTCAGACACTG | + |
|
Preference number: 3 (lower is better) Translates to: VHPLLTFKRHRSHCTTFFVWFND*AISQTL Trigger: CAGTGTCTGAGAAATGGCCAAGTCATTGAACCAGAC...AAAGAACGTCGTGCAATGAGAGCGATGTCTTTTGAACGTAAGAAGTGGATGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| 3UTR TCA 72 bp | GGACAAGGCACTTATTGTCCTCAAATTCATGCTTTGTaGCGGGGTGAGAGCAGGCAGTGGAATTATCTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: GQGTYCPQIHAL*RGESRQWNYLY Trigger: ATAAAGATAATTCCACTGCCTGCTCTCACCCCGTCACAAAGCATGAATTTGAGGACAATAAGTGCCTTGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| 3UTR GCA 72 bp | GATAGATGCCAATCAAGCAGAAATCTGCAGCTCTTCTaGTGTGTGCCTCTCAACACTTGCAATTTTTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: DRCQSSRNLQLF*CVPLNTCNFSG Trigger: ACCAGAAAAATTGCAAGTGTTGAGAGGCACACAGCAGAAGAGCTGCAGATTTCTGCTTGATTGGCATCTATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| 3UTR GCA 72 bp | GCATTATTTGATTACCAAGGACCTGCACTCCCGGCATaGTTGCTTGCAAACTTCTCCAATATTGTTTGGATT | + |
|
Preference number: 3 (lower is better) Translates to: ALFDYQGPALPA*LLANFSNIVWI Trigger: AATCCAAACAATATTGGAGAAGTTTGCAAGCAAGCATGCCGGGAGTGCAGGTCCTTGGTAATCAAATAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| 3UTR CCA 72 bp | CCGGCATGCTTGCTTGCAAACTTCTCCAATATTGTTTaGATTGTTGAGCAATATCATCATGGGAGATACCTC | + |
|
Preference number: 3 (lower is better) Translates to: PACLLANFSNIV*IVEQYHHGRYL Trigger: GAGGTATCTCCCATGATGATATTGCTCAACAATCCAAACAATATTGGAGAAGTTTGCAAGCAAGCATGCCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| 3UTR GCA 72 bp | AAATGTACAGTGGCCAGGATATCGGCATTCATCATCTaGAGCAACATCTTTGCATATATAATATGGTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: KCTVARISAFII*SNIFAYIIWSF Trigger: GAAGGACCATATTATATATGCAAAGATGTTGCTGCAGATGATGAATGCCGATATCCTGGCCACTGTACATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| 3UTR TCA 72 bp | CTTGCTTGCAAACTTCTCCAATATTGTTTGGATTGTTaGGCAATATCATCATGGGAGATACCTCTTTCACTT | + |
|
Preference number: 3 (lower is better) Translates to: LACKLLQYCLDC*AISSWEIPLSL Trigger: AAGTGAAAGAGGTATCTCCCATGATGATATTGCTCAACAATCCAAACAATATTGGAGAAGTTTGCAAGCAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| 3UTR GCA 72 bp | CAGGATATCGGCATTCATCATCTGCAGCAACATCTTTaGATATATAATATGGTCCTTCATAATTTGTTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: QDIGIHHLQQHL*IYNMVLHNLFL Trigger: CAAAAACAAATTATGAAGGACCATATTATATATGCAAAGATGTTGCTGCAGATGATGAATGCCGATATCCTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| CDS-3UTR TCA 90 bp | GGCAGCAAGTCCCTTCGCCATCTGATGCCAGTGGCTCCGCAAGAGCTTAGCCAGCAAATTCATGCTTTGTaGCGGGGTGAGAGCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSKSLRHLMPVAPQELSQQIHAL*RGESRQ Trigger: CTGCCTGCTCTCACCCCGTCACAAAGCATGAATTTG...CTGGCTAAGCTCTTGCGGAGCCACTGGCATCAGATGGCGAAGGGACTTGCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR CCA 90 bp | CCCCAGCACACCTCATCCGAGCTTCTGTCCAACAGACAGCAACCTGGCAGCAAGACCGCATACTGCTCCTaGGTCCCAGGATATGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQHTSSELLSNRQQPGSKTAYCS*VPGYDS Trigger: GCTGTCATATCCTGGGACCCAGGAGCAGTATGCGGT...CTTGCTGCCAGGTTGCTGTCTGTTGGACAGAAGCTCGGATGAGGTGTGCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR TCA 90 bp | CACTGCTGTGGCTCTGACCTCAGAGTCATCCTCAACCTTACCCCTTCCCCAGCACGCTCCTCTGGACTATaGGCAAAGGAACAGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HCCGSDLRVILNLTPSPARSSGL*AKEQLP Trigger: TGGCAACTGTTCCTTTGCTCATAGTCCAGAGGAGCG...TGCTGGGGAAGGGGTAAGGTTGAGGATGACTCTGAGGTCAGAGCCACAGCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR TCA 90 bp | CCCCAGCACACCTCATCCGAGCTTCTGTCCAACAGACAGCAACCTGGCAGCAAGACCTCTCACAAATACTaGAGTACCCAGTGGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQHTSSELLSNRQQPGSKTSHKY*STQWGS Trigger: GCTTCCCCACTGGGTACTTCAGTATTTGTGAGAGGT...CTTGCTGCCAGGTTGCTGTCTGTTGGACAGAAGCTCGGATGAGGTGTGCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR GCA 90 bp | CAACCTGGCAGCAAGTCCCTTCGCCATCTGATGCCAGTGGCTCCGCAAGAGCTTTCTTTGGTCCACGAATaGTGTGCTTTGGCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QPGSKSLRHLMPVAPQELSLVHE*CALALQ Trigger: CTGCAGTGCCAAAGCACAGCATTCGTGGACCAAAGA...AAGCTCTTGCGGAGCCACTGGCATCAGATGGCGAAGGGACTTGCTGCCAGGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR GCA 90 bp | GTGGCTCCGCAAGAGCTTAGCCAGGCCTGTCAAACAGCCTTTTTCCTATCTACTGTGGGGAAGCGGTGCTaGCAGCAGTACTGGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VAPQELSQACQTAFFLSTVGKRC*QQYWSS Trigger: GGATGACCAGTACTGCTGGCAGCACCGCTTCCCCAC...AGTAGATAGGAAAAAGGCTGTTTGACAGGCCTGGCTAAGCTCTTGCGGAGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR GCA 90 bp | CCCCAGCACACCTCATCCGAGCTTCTGTCCAACAGACAGCAACCTGGCAGCAAGAGACATCGCTCTCATTaGACGACGTTCTTTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PQHTSSELLSNRQQPGSKRHRSH*TTFFGP Trigger: TGGACCAAAGAACGTCGTGCAATGAGAGCGATGTCT...CTTGCTGCCAGGTTGCTGTCTGTTGGACAGAAGCTCGGATGAGGTGTGCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR CCA 90 bp | CAACCTGGCAGCAAGTCCCTTCGCCATCTGATGCCAGTGGCTCCGCAAGAGCTTTGGTCATCCTCAGTGTaGAAAACCTTCTCCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QPGSKSLRHLMPVAPQELWSSSV*KTFSLC Trigger: GCACAAGGAGAAGGTTTTCCACACTGAGGATGACCA...AAGCTCTTGCGGAGCCACTGGCATCAGATGGCGAAGGGACTTGCTGCCAGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR TCA 90 bp | CACTGCTGTGGCTCTGACCTCAGAGTCATCCTCAACCTTACCCCTTCCCCAGCAAGAAAGCCTCTCGACTaGATGCCCCTTTTCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HCCGSDLRVILNLTPSPARKPLD*MPLFFP Trigger: TGGAAAGAAAAGGGGCATTCAGTCGAGAGGCTTTCT...TGCTGGGGAAGGGGTAAGGTTGAGGATGACTCTGAGGTCAGAGCCACAGCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR TCA 90 bp | CCCCAGCACACCTCATCCGAGCTTCTGTCCAACAGACAGCAACCTGGCAGCAAGCTTTCCGTGCTTTCTTaGATTTCATCTGTAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PQHTSSELLSNRQQPGSKLSVLS*ISSVGP Trigger: AGGCCCTACAGATGAAATTCAAGAAAGCACGGAAAG...CTTGCTGCCAGGTTGCTGTCTGTTGGACAGAAGCTCGGATGAGGTGTGCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR CCA 90 bp | TTACCCCTTCCCCAGCACACCTCATCCGAGCTTCTGTCCAACAGACAGCAACCTTGCTGCCAGCAGTACTaGTCATCCTCAGTGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPLPQHTSSELLSNRQQPCCQQY*SSSVWK Trigger: TTTCCACACTGAGGATGACCAGTACTGCTGGCAGCA...AGGTTGCTGTCTGTTGGACAGAAGCTCGGATGAGGTGTGCTGGGGAAGGGGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR TCA 90 bp | GTGGCTCCGCAAGAGCTTAGCCAGGCCTGTCAAACAGCCTTTTTCCTATCTACTTGCTTTGTGACGGGGTaGGAGCAGGCAGTGGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: VAPQELSQACQTAFFLSTCFVTG*EQAVEL Trigger: TAATTCCACTGCCTGCTCTCACCCCGTCACAAAGCA...AGTAGATAGGAAAAAGGCTGTTTGACAGGCCTGGCTAAGCTCTTGCGGAGCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR GCA 90 bp | CTTCCCGCTCCTCTGGACTATGAGCAAAGGAACAGTTGCCAACATACTGACACTCCTGCACTCCCGGCATaGTTGCTTGCAAACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPAPLDYEQRNSCQHTDTPALPA*LLANFS Trigger: GGAGAAGTTTGCAAGCAAGCATGCCGGGAGTGCAGG...AGTGTCAGTATGTTGGCAACTGTTCCTTTGCTCATAGTCCAGAGGAGCGGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140898.8 |
||
| CDS-3UTR GCA 90 bp | TTACCCCTTCCCCAGCACACCTCATCCGAGCTTCTGTCCAACAGACAGCAACCTGCTGTGCTTTGGCACTaGAGTACTTTCTGTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPLPQHTSSELLSNRQQPAVLWH*STFCSC Trigger: ACAGGAACAGAAAGTACTGCAGTGCCAAAGCACAGC...AGGTTGCTGTCTGTTGGACAGAAGCTCGGATGAGGTGTGCTGGGGAAGGGGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR CCA 90 bp | CCCCAGCACACCTCATCCGAGCTTCTGTCCAACAGACAGCAACCTGGCAGCAAGAGCATCATTTGTTTCTaGGGCAGAATCAAGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQHTSSELLSNRQQPGSKSIICF*GRIKKS Trigger: GCTCTTCTTGATTCTGCCCCAGAAACAAATGATGCT...CTTGCTGCCAGGTTGCTGTCTGTTGGACAGAAGCTCGGATGAGGTGTGCTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR CCA 90 bp | CCCCAGCACACCTCATCCGAGCTTCTGTCCAACAGACAGCAACCTGGCAGCAAGCTTTCTGTTCCTGTCTaGTTCAATGACTTGGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: PQHTSSELLSNRQQPGSKLSVPV*FNDLAI Trigger: AATGGCCAAGTCATTGAACCAGACAGGAACAGAAAG...CTTGCTGCCAGGTTGCTGTCTGTTGGACAGAAGCTCGGATGAGGTGTGCTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR TCA 90 bp | AAGTCCACACTTCCCGCTCCTCTGGACTATGAGCAAAGGAACAGTTGCCAACATCAAATTCATGCTTTGTaGCGGGGTGAGAGCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSTLPAPLDYEQRNSCQHQIHAL*RGESRQ Trigger: CTGCCTGCTCTCACCCCGTCACAAAGCATGAATTTG...ATGTTGGCAACTGTTCCTTTGCTCATAGTCCAGAGGAGCGGGAAGTGTGGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140898.8 |
||
| CDS-3UTR GCA 90 bp | TTGCTGCTCAGGAGGAACGATAGATGCCAATCAAGCAGAAATCTGCAGCTCTTCCAGATCTGGCAAGCTTaGCTCAGCTCGTGGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLRRNDRCQSSRNLQLFQIWQA*LSSWVP Trigger: AGGAACCCACGAGCTGAGGCAAGCTTGCCAGATCTG...GAAGAGCTGCAGATTTCTGCTTGATTGGCATCTATCGTTCCTCCTGAGCAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR CCA 90 bp | TTACCCCTTCCCCAGCACACCTCATCCGAGCTTCTGTCCAACAGACAGCAACCTCATTTGCAAACACTGTaGATGGCAGAGGACTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LPLPQHTSSELLSNRQQPHLQTL*MAEDSH Trigger: ATGAGAGTCCTCTGCCATCCACAGTGTTTGCAAATG...AGGTTGCTGTCTGTTGGACAGAAGCTCGGATGAGGTGTGCTGGGGAAGGGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR CCA 90 bp | GTGTGCCTCTCAACACTTGCAATTTTTCTGGTCAGTGCTCTGATTGGGTTACATGCTTGCCTCAGCTCGTaGGTTCCTTCGAGGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: VCLSTLAIFLVSALIGLHACLSS*VPSRGC Trigger: GCATCCCCTCGAAGGAACCCACGAGCTGAGGCAAGC...ATGTAACCCAATCAGAGCACTGACCAGAAAAATTGCAAGTGTTGAGAGGCACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR CCA 90 bp | GTGGCTCCGCAAGAGCTTAGCCAGGCCTGTCAAACAGCCTTTTTCCTATCTACTCACTTCCCGCTCCTCTaGACTATGAGCAAAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: VAPQELSQACQTAFFLSTHFPLL*TMSKGT Trigger: TGTTCCTTTGCTCATAGTCCAGAGGAGCGGGAAGTG...AGTAGATAGGAAAAAGGCTGTTTGACAGGCCTGGCTAAGCTCTTGCGGAGCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR TCA 90 bp | TTCCCGCTCCTCTGGACTATGAGCAAAGGAACAGTTGCCAACATACTGACACTTTGCTTTGTGACGGGGTaGGAGCAGGCAGTGGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: FPLLWTMSKGTVANILTLCFVTG*EQAVEL Trigger: TAATTCCACTGCCTGCTCTCACCCCGTCACAAAGCA...AAGTGTCAGTATGTTGGCAACTGTTCCTTTGCTCATAGTCCAGAGGAGCGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140898.8 |
||
| CDS-3UTR GCA 90 bp | TGTAAGTCCACACTTCCCGCTCCTCTGGACTATGAGCAAAGGAACAGTTGCCAATCTTTGGTCCACGAATaGTGTGCTTTGGCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CKSTLPAPLDYEQRNSCQSLVHE*CALALQ Trigger: CTGCAGTGCCAAAGCACAGCATTCGTGGACCAAAGA...TTGGCAACTGTTCCTTTGCTCATAGTCCAGAGGAGCGGGAAGTGTGGACTTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140898.8 |
||
| CDS-3UTR GCA 90 bp | TTACCCCTTCCCCAGCACACCTCATCCGAGCTTCTGTCCAACAGACAGCAACCTATGTGGTCTTGCCATTaGTTCTCACTGTTACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPLPQHTSSELLSNRQQPMWSCH*FSLLQF Trigger: GAACTGTAACAGTGAGAAGCAATGGCAAGACCACAT...AGGTTGCTGTCTGTTGGACAGAAGCTCGGATGAGGTGTGCTGGGGAAGGGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR TCA 90 bp | TCCAGGCATTATTTGATTACCAAGGACCTGCACTCCCGGCATGCTTGCTTGCAACCAGCTCACTCCCAATaGCATGAGAAAAACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SRHYLITKDLHSRHACLQPAHSQ*HEKNWM Trigger: CATCCAGTTTTTCTCATGTCATTGGGAGTGAGCTGG...TTGCAAGCAAGCATGCCGGGAGTGCAGGTCCTTGGTAATCAAATAATGCCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| CDS-3UTR TCA 90 bp | TTACCCCTTCCCCAGCACACCTCATCCGAGCTTCTGTCCAACAGACAGCAACCTCCATTTCTCAGACACTaGGCACATACAAACTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: LPLPQHTSSELLSNRQQPPFLRH*AHTNFI Trigger: GATAAAGTTTGTATGTGCTCAGTGTCTGAGAAATGG...AGGTTGCTGTCTGTTGGACAGAAGCTCGGATGAGGTGTGCTGGGGAAGGGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR TCA 90 bp | TGTAAGTCCACACTTCCCGCTCCTCTGGACTATGAGCAAAGGAACAGTTGCCAATCCTGTCTGGTTCAATaGCTTGGCCATTTCTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CKSTLPAPLDYEQRNSCQSCLVQ*LGHFSD Trigger: GTCTGAGAAATGGCCAAGTCATTGAACCAGACAGGA...TTGGCAACTGTTCCTTTGCTCATAGTCCAGAGGAGCGGGAAGTGTGGACTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140898.8 |
||
| CDS-3UTR GCA 90 bp | TTACCCCTTCCCCAGCACACCTCATCCGAGCTTCTGTCCAACAGACAGCAACCTTCGGCATTCATCATCTaGAGCAACATCTTTGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: LPLPQHTSSELLSNRQQPSAFII*SNIFAY Trigger: ATATGCAAAGATGTTGCTGCAGATGATGAATGCCGA...AGGTTGCTGTCTGTTGGACAGAAGCTCGGATGAGGTGTGCTGGGGAAGGGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR GCA 90 bp | TTACCCCTTCCCCAGCACACCTCATCCGAGCTTCTGTCCAACAGACAGCAACCTGAGCAAAGGAACAGTTaGCAACATACTGACACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPLPQHTSSELLSNRQQPEQRNS*QHTDTF Trigger: AAAAGTGTCAGTATGTTGGCAACTGTTCCTTTGCTC...AGGTTGCTGTCTGTTGGACAGAAGCTCGGATGAGGTGTGCTGGGGAAGGGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| 3UTR CAA 72 bp | ATTGCACGACGTTCTTTGGTCCACGAATGCTGTGCTTaGGCACTGCAGTACTTTCTGTTCCTGTCTGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IARRSLVHECCA*ALQYFLFLSGS Trigger: TGAACCAGACAGGAACAGAAAGTACTGCAGTGCCAAAGCACAGCATTCGTGGACCAAAGAACGTCGTGCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| CDS-3UTR TCA 90 bp | TCAGGAGGAACGATAGATGCCAATCAAGCAGAAATCTGCAGCTCTTCTGCTGTGTCCTGTCTGGTTCAATaGCTTGGCCATTTCTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGGTIDANQAEICSSSAVSCLVQ*LGHFSD Trigger: GTCTGAGAAATGGCCAAGTCATTGAACCAGACAGGA...CACAGCAGAAGAGCTGCAGATTTCTGCTTGATTGGCATCTATCGTTCCTCCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR GCA 90 bp | GTGGCTCCGCAAGAGCTTAGCCAGGCCTGTCAAACAGCCTTTTTCCTATCTACTGGACTCTCATCCACTTaGAGTTGCAAAACAGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VAPQELSQACQTAFFLSTGLSST*SCKTEV Trigger: AACTTCTGTTTTGCAACTGCAAGTGGATGAGAGTCC...AGTAGATAGGAAAAAGGCTGTTTGACAGGCCTGGCTAAGCTCTTGCGGAGCCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR GCA 90 bp | TCAGGAGGAACGATAGATGCCAATCAAGCAGAAATCTGCAGCTCTTCTGCTGTGGATCTTCCCTCCATTTaGAAACACTGTGGATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGGTIDANQAEICSSSAVDLPSI*KHCGWQ Trigger: CTGCCATCCACAGTGTTTGCAAATGGAGGGAAGATC...CACAGCAGAAGAGCTGCAGATTTCTGCTTGATTGGCATCTATCGTTCCTCCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR GCA 90 bp | CTGTTGTTAAGCGGTGTTCCCTCTCTAGCAGTTGAGGTGCACAGATATTCAAGCGATCTTCCCTCCATTTaGAAACACTGTGGATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLSGVPSLAVEVHRYSSDLPSI*KHCGWQ Trigger: CTGCCATCCACAGTGTTTGCAAATGGAGGGAAGATC...GCTTGAATATCTGTGCACCTCAACTGCTAGAGAGGGAACACCGCTTAACAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| CDS-3UTR GCA 90 bp | TTTTTCCTATCTACTGTGGGTTGCTGCTCAGGAGGAACGATAGATGCCAATCAAGTTCCTTCGAGGGGATaGCTAGGAGTCCCTGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: FFLSTVGCCSGGTIDANQVPSRG*LGVPDE Trigger: TTCATCAGGGACTCCTAGGCATCCCCTCGAAGGAAC...TTGATTGGCATCTATCGTTCCTCCTGAGCAGCAACCCACAGTAGATAGGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR GCA 90 bp | CAAGAGCTTAGCCAGGCCTGTCAAACAGCCTTTTTCCTATCTACTGTGGGTTGCAGCTGCTTCCTTCTGTaGAGGAGCCATTTATATACC | + |
|
Preference number: 4 (lower is better) Translates to: QELSQACQTAFFLSTVGCSCFLL*RSHLYT Trigger: GGTATATAAATGGCTCCTGCACAGAAGGAAGCAGCT...GCAACCCACAGTAGATAGGAAAAAGGCTGTTTGACAGGCCTGGCTAAGCTCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR GCA 90 bp | TACTGTGGGTTGCTGCTCAGGAGGAACGATAGATGCCAATCAAGCAGAAATCTGGTGCAAATTTACAGCTaGTTCCTTCTGTGCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YCGLLLRRNDRCQSSRNLVQIYS*FLLCRS Trigger: GCTCCTGCACAGAAGGAAGCAGCTGTAAATTTGCAC...CAGATTTCTGCTTGATTGGCATCTATCGTTCCTCCTGAGCAGCAACCCACAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR CCA 90 bp | TTCCCGCTCCTCTGGACTATGAGCAAAGGAACAGTTGCCAACATACTGACACTTTATGACAGCGGAGACTaGATGAACTGTAGACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FPLLWTMSKGTVANILTLYDSGD*MNCRPS Trigger: GGAAGGTCTACAGTTCATCCAGTCTCCGCTGTCATA...AAGTGTCAGTATGTTGGCAACTGTTCCTTTGCTCATAGTCCAGAGGAGCGGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| CDS-3UTR CCA 90 bp | TGTGTGCCTCTCAACACTTGCAATTTTTCTGGTCAGTGCTCTGATTGGGTTACAAATAGTTCACAGCCTTaGGAGCCCCATCCCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CVPLNTCNFSGQCSDWVTNSSQP*EPHPQE Trigger: TTCCTGGGGATGGGGCTCCCAAGGCTGTGAACTATT...TGTAACCCAATCAGAGCACTGACCAGAAAAATTGCAAGTGTTGAGAGGCACACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR TCA 90 bp | TCCACACTTCCCGCTCCTCTGGACTATGAGCAAAGGAACAGTTGCCAACATACTAATCCAGGCATTATTTaGTTACCAAGGACCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: STLPAPLDYEQRNSCQHTNPGII*LPRTCT Trigger: AGTGCAGGTCCTTGGTAATCAAATAATGCCTGGATT...AGTATGTTGGCAACTGTTCCTTTGCTCATAGTCCAGAGGAGCGGGAAGTGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140898.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCACTCATCTTCCCTCACGCAGCCATAACGAACTTCATGTCGACAAATATCTCCTTTATGCTGTGCTaGCTCTTTCTTCTCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: EALIFPHAAITNFMSTNISFMLC*LFLLSS Trigger: CGAGGAGAGAAGAAAGAGGCAGCACAGCATAAAGGA...GATATTTGTCGACATGAAGTTCGTTATGGCTGCGTGAGGGAAGATGAGTGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| CDS-3UTR GCA 90 bp | TTACCCCTTCCCCAGCACACCTCATCCGAGCTTCTGTCCAACAGACAGCAACCTCTGCAGCAACATCTTTaGATATATAATATGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPLPQHTSSELLSNRQQPLQQHL*IYNMVL Trigger: AAGGACCATATTATATATGCAAAGATGTTGCTGCAG...AGGTTGCTGTCTGTTGGACAGAAGCTCGGATGAGGTGTGCTGGGGAAGGGGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR GCA 90 bp | TATCCTTCATGTAAGTCCACACTTCCCGCTCCTCTGGACTATGAGCAAAGGAACCCCGGCATGCTTGCTTaGAAACTTCTCCAATATTGT | + |
|
Preference number: 4 (lower is better) Translates to: YPSCKSTLPAPLDYEQRNPGMLA*KLLQYC Trigger: ACAATATTGGAGAAGTTTGCAAGCAAGCATGCCGGG...GTTCCTTTGCTCATAGTCCAGAGGAGCGGGAAGTGTGGACTTACATGAAGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140898.8 |
||
| CDS-3UTR GCA 90 bp | ACACTTGCAATTTTTCTGGTCAGTGCTCTGATTGGGTTACATAAAAGCCAGCATCCTGCACTCCCGGCATaGTTGCTTGCAAACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLAIFLVSALIGLHKSQHPALPA*LLANFS Trigger: GGAGAAGTTTGCAAGCAAGCATGCCGGGAGTGCAGG...ATGCTGGCTTTTATGTAACCCAATCAGAGCACTGACCAGAAAAATTGCAAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR GCA 90 bp | TCAGGAGGAACGATAGATGCCAATCAAGCAGAAATCTGCAGCTCTTCTGCTGTGGAGGAGATGTGGTCTTaGCATTGCTTCTCACTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SGGTIDANQAEICSSSAVEEMWS*HCFSLL Trigger: TAACAGTGAGAAGCAATGGCAAGACCACATCTCCTC...CACAGCAGAAGAGCTGCAGATTTCTGCTTGATTGGCATCTATCGTTCCTCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR GCA 90 bp | AGCAATATTGGTCCATACACTACACAATACCAGCAGTACAAGTTGAATCTTTCACCAGTGGGGAAGCGGTaGTGCCAGCAGTACTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SNIGPYTTQYQQYKLNLSPVGKR*CQQYWS Trigger: TGACCAGTACTGCTGGCAGCACCGCTTCCCCACTGG...TGAAAGATTCAACTTGTACTGCTGGTATTGTGTAGTGTATGGACCAATATTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR CCA 90 bp | TGTAAGTCCACACTTCCCGCTCCTCTGGACTATGAGCAAAGGAACAGTTGCCAACTTTCTGTTCCTGTCTaGTTCAATGACTTGGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: CKSTLPAPLDYEQRNSCQLSVPV*FNDLAI Trigger: AATGGCCAAGTCATTGAACCAGACAGGAACAGAAAG...TTGGCAACTGTTCCTTTGCTCATAGTCCAGAGGAGCGGGAAGTGTGGACTTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140898.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGAGGAACGATAGATGCCAATCAAGCAGAAATCTGCAGCTCTTCTGCTGTGACGAATGCTGTGCTTTaGCACTGCAGTACTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGGTIDANQAEICSSSAVTNAVL*HCSTFC Trigger: ACAGAAAGTACTGCAGTGCCAAAGCACAGCATTCGT...CACAGCAGAAGAGCTGCAGATTTCTGCTTGATTGGCATCTATCGTTCCTCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR CCA 90 bp | TGCCTCAGCTCGTGGGTTCCTTCGAGGGGATGCCTAGGAGTCCCTGATGAAAATTGTAAATCTCTCGTTTaGATTCAGTCACTGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: CLSSWVPSRGCLGVPDENCKSLV*IQSLKM Trigger: CATTTTCAGTGACTGAATCCAAACGAGAGATTTACA...ATTTTCATCAGGGACTCCTAGGCATCCCCTCGAAGGAACCCACGAGCTGAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| CDS-3UTR TCA 90 bp | TTGCTGCTCAGGAGGAACGATAGATGCCAATCAAGCAGAAATCTGCAGCTCTTCTCACTCCCAATGACATaGGAAAAACTGGATGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLRRNDRCQSSRNLQLFSLPMT*EKLDVG Trigger: TCCTACATCCAGTTTTTCTCATGTCATTGGGAGTGA...GAAGAGCTGCAGATTTCTGCTTGATTGGCATCTATCGTTCCTCCTGAGCAGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR TCA 90 bp | TCCACTAAAACACATAAGGAATTTCATCCATCATGTACTCCGATCCCACTGTGCTCCCTCTCTAGCAGTTaGGGTGCACAGATCTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: STKTHKEFHPSCTPIPLCSLSSS*GAQISF Trigger: AAACGAGATCTGTGCACCTCAACTGCTAGAGAGGGA...GCACAGTGGGATCGGAGTACATGATGGATGAAATTCCTTATGTGTTTTAGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR TCA 90 bp | CAAGAGCTTAGCCAGGCCTGTCAAACAGCCTTTTTCCTATCTACTGTGGGTTGCAATGTAAACTCTCCATaGTGCTCTTGGAGAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QELSQACQTAFFLSTVGCNVNSP*CSWRIL Trigger: CAGAATTCTCCAAGAGCATCATGGAGAGTTTACATT...GCAACCCACAGTAGATAGGAAAAAGGCTGTTTGACAGGCCTGGCTAAGCTCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR GCA 90 bp | TTTGTTATCCTTCATGTAAGTCCACACTTCCCGCTCCTCTGGACTATGAGCAAAAGACATCGCTCTCATTaGACGACGTTCTTTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FVILHVSPHFPLLWTMSKRHRSH*TTFFGP Trigger: TGGACCAAAGAACGTCGTGCAATGAGAGCGATGTCT...TTTGCTCATAGTCCAGAGGAGCGGGAAGTGTGGACTTACATGAAGGATAACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140898.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGCCTCTCAACACTTGCAATTTTTCTGGTCAGTGCTCTGATTGGGTTACATGCTTCCCGTTTTCTTTaGTACAGTGACTGGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VCLSTLAIFLVSALIGLHASRFL*YSDWLS Trigger: AGACAGCCAGTCACTGTAGCAAAGAAAACGGGAAGC...ATGTAACCCAATCAGAGCACTGACCAGAAAAATTGCAAGTGTTGAGAGGCACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR GCA 90 bp | TCAGGAGGAACGATAGATGCCAATCAAGCAGAAATCTGCAGCTCTTCTGCTGTGGTTGGCATATGGATCTaGTTCCCGTTTTCTTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SGGTIDANQAEICSSSAVVGIWI*FPFSLL Trigger: TAGCAAAGAAAACGGGAAGCAGATCCATATGCCAAC...CACAGCAGAAGAGCTGCAGATTTCTGCTTGATTGGCATCTATCGTTCCTCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR CCA 90 bp | AATAAGACTATGGGCATAGAAGCACTCATCTTCCCTCACGCAGCCATAACGAACCATTTGCAAACACTGTaGATGGCAGAGGACTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NKTMGIEALIFPHAAITNHLQTL*MAEDSH Trigger: ATGAGAGTCCTCTGCCATCCACAGTGTTTGCAAATG...GTTCGTTATGGCTGCGTGAGGGAAGATGAGTGCTTCTATGCCCATAGTCTTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| CDS-3UTR CCA 90 bp | GTGTGCCTCTCAACACTTGCAATTTTTCTGGTCAGTGCTCTGATTGGGTTACATTTTACAAAGCAGATCTaGCAAGCTTGCCTCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VCLSTLAIFLVSALIGLHFTKQI*QACLSS Trigger: CGAGCTGAGGCAAGCTTGCCAGATCTGCTTTGTAAA...ATGTAACCCAATCAGAGCACTGACCAGAAAAATTGCAAGTGTTGAGAGGCACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| 3UTR CAA 72 bp | TTGATTACCAAGGACCTGCACTCCCGGCATGCTTGCTaGCAAACTTCTCCAATATTGTTTGGATTGTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LITKDLHSRHAC*QTSPILFGLLS Trigger: GCTCAACAATCCAAACAATATTGGAGAAGTTTGCAAGCAAGCATGCCGGGAGTGCAGGTCCTTGGTAATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| 3UTR CAA 72 bp | TCATCCACTTCTTACGTTCAAAAGACATCGCTCTCATaGCACGACGTTCTTTGGTCCACGAATGCTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSTSYVQKTSLS*HDVLWSTNAVL Trigger: AAGCACAGCATTCGTGGACCAAAGAACGTCGTGCAATGAGAGCGATGTCTTTTGAACGTAAGAAGTGGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| CDS-3UTR TCA 90 bp | CTTCCCGCTCCTCTGGACTATGAGCAAAGGAACAGTTGCCAACATACTGACACTTATTGTTTGGATTGTTaGGCAATATCATCATGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPAPLDYEQRNSCQHTDTYCLDC*AISSWE Trigger: CTCCCATGATGATATTGCTCAACAATCCAAACAATA...AGTGTCAGTATGTTGGCAACTGTTCCTTTGCTCATAGTCCAGAGGAGCGGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140898.8 |
||
| CDS-3UTR GCA 90 bp | TCCACTAAAACACATAAGGAATTTCATCCATCATGTACTCCGATCCCACTGTGCTCCTTTATGCTGTGCTaGCTCTTTCTTCTCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: STKTHKEFHPSCTPIPLCSFMLC*LFLLSS Trigger: CGAGGAGAGAAGAAAGAGGCAGCACAGCATAAAGGA...GCACAGTGGGATCGGAGTACATGATGGATGAAATTCCTTATGTGTTTTAGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR GCA 90 bp | ATCCACTTCTTACGTTCAAAAGACATCGCTCTCATTGCACGACGTTCTTTGGTCGTAGACCTTCCTTTATaGTGTGCTGCCTCTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IHFLRSKDIALIARRSLVVDLPL*CAASFF Trigger: GAAGAAAGAGGCAGCACAGCATAAAGGAAGGTCTAC...GACCAAAGAACGTCGTGCAATGAGAGCGATGTCTTTTGAACGTAAGAAGTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| CDS-3UTR GCA 90 bp | ACACTTGCAATTTTTCTGGTCAGTGCTCTGATTGGGTTACATAAAAGCCAGCATAGCCTCTCGACTGAATaGCCCTTTTCTTTCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TLAIFLVSALIGLHKSQHSLSTE*PFSFQG Trigger: ACCCTGGAAAGAAAAGGGGCATTCAGTCGAGAGGCT...ATGCTGGCTTTTATGTAACCCAATCAGAGCACTGACCAGAAAAATTGCAAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR CCA 90 bp | ATTGCTCTATATCATGTATTTTGTTATCCTTCATGTAAGTCCACACTTCCCGCTACCGCATACTGCTCCTaGGTCCCAGGATATGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: IALYHVFCYPSCKSTLPATAYCS*VPGYDS Trigger: GCTGTCATATCCTGGGACCCAGGAGCAGTATGCGGT...AGCGGGAAGTGTGGACTTACATGAAGGATAACAAAATACATGATATAGAGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| CDS-3UTR CCA 90 bp | TTTGTTATCCTTCATGTAAGTCCACACTTCCCGCTCCTCTGGACTATGAGCAAAACGAATGCTGTGCTTTaGCACTGCAGTACTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FVILHVSPHFPLLWTMSKTNAVL*HCSTFC Trigger: ACAGAAAGTACTGCAGTGCCAAAGCACAGCATTCGT...TTTGCTCATAGTCCAGAGGAGCGGGAAGTGTGGACTTACATGAAGGATAACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140898.8 |
||
| CDS-3UTR TCA 90 bp | TCAGGAGGAACGATAGATGCCAATCAAGCAGAAATCTGCAGCTCTTCTGCTGTGTATTGTTTGGATTGTTaGGCAATATCATCATGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGGTIDANQAEICSSSAVYCLDC*AISSWE Trigger: CTCCCATGATGATATTGCTCAACAATCCAAACAATA...CACAGCAGAAGAGCTGCAGATTTCTGCTTGATTGGCATCTATCGTTCCTCCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR CCA 90 bp | ACACTTGCAATTTTTCTGGTCAGTGCTCTGATTGGGTTACATAAAAGCCAGCATTATGACAGCGGAGACTaGATGAACTGTAGACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLAIFLVSALIGLHKSQHYDSGD*MNCRPS Trigger: GGAAGGTCTACAGTTCATCCAGTCTCCGCTGTCATA...ATGCTGGCTTTTATGTAACCCAATCAGAGCACTGACCAGAAAAATTGCAAGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR CCA 90 bp | TCCACTAAAACACATAAGGAATTTCATCCATCATGTACTCCGATCCCACTGTGCGCATTTGTTTCTTTGTaGGGAGAGGACGGATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: STKTHKEFHPSCTPIPLCAFVSL*GEDGCS Trigger: TGAACATCCGTCCTCTCCCCACAAAGAAACAAATGC...GCACAGTGGGATCGGAGTACATGATGGATGAAATTCCTTATGTGTTTTAGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR TCA 90 bp | ACTGTGGTCTCTCTCAAAATGTGGACAAGGCACTTATTGTCCTCAAATTCATGCTCACTCCCAATGACATaGGAAAAACTGGATGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVVSLKMWTRHLLSSNSCSLPMT*EKLDVG Trigger: TCCTACATCCAGTTTTTCTCATGTCATTGGGAGTGA...GCATGAATTTGAGGACAATAAGTGCCTTGTCCACATTTTGAGAGAGACCACAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| CDS-3UTR TCA 90 bp | TCCACTAAAACACATAAGGAATTTCATCCATCATGTACTCCGATCCCACTGTGCAATCCAGGCATTATTTaGTTACCAAGGACCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: STKTHKEFHPSCTPIPLCNPGII*LPRTCT Trigger: AGTGCAGGTCCTTGGTAATCAAATAATGCCTGGATT...GCACAGTGGGATCGGAGTACATGATGGATGAAATTCCTTATGTGTTTTAGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR TCA 90 bp | TTTGTTATCCTTCATGTAAGTCCACACTTCCCGCTCCTCTGGACTATGAGCAAACCATTTCTCAGACACTaGGCACATACAAACTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: FVILHVSPHFPLLWTMSKPFLRH*AHTNFI Trigger: GATAAAGTTTGTATGTGCTCAGTGTCTGAGAAATGG...TTTGCTCATAGTCCAGAGGAGCGGGAAGTGTGGACTTACATGAAGGATAACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140898.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTGGTCTCTCTCAAAATGTGGACAAGGCACTTATTGTCCTCAAATTCATGCGGACTCTCATCCACTTaGAGTTGCAAAACAGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TVVSLKMWTRHLLSSNSCGLSST*SCKTEV Trigger: AACTTCTGTTTTGCAACTGCAAGTGGATGAGAGTCC...GCATGAATTTGAGGACAATAAGTGCCTTGTCCACATTTTGAGAGAGACCACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| CDS-3UTR CCA 90 bp | AGCAATATTGGTCCATACACTACACAATACCAGCAGTACAAGTTGAATCTTTCATGCAAACACTGTGGATaGCAGAGGACTCTCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SNIGPYTTQYQQYKLNLSCKHCG*QRTLIH Trigger: GTGGATGAGAGTCCTCTGCCATCCACAGTGTTTGCA...TGAAAGATTCAACTTGTACTGCTGGTATTGTGTAGTGTATGGACCAATATTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR CCA 90 bp | ACTGTGGTCTCTCTCAAAATGTGGACAAGGCACTTATTGTCCTCAAATTCATGCAGCATCATTTGTTTCTaGGGCAGAATCAAGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TVVSLKMWTRHLLSSNSCSIICF*GRIKKS Trigger: GCTCTTCTTGATTCTGCCCCAGAAACAAATGATGCT...GCATGAATTTGAGGACAATAAGTGCCTTGTCCACATTTTGAGAGAGACCACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| CDS-3UTR GCA 90 bp | ATTCCACTAAAACACATAAGGAATTTCATCCATCATGTACTCCGATCCCACTGTTCATCCACTTGCAGTTaGAAAACAGAAGTTACCGGC | + |
|
Preference number: 4 (lower is better) Translates to: IPLKHIRNFIHHVLRSHCSSTCS*KTEVTG Trigger: GCCGGTAACTTCTGTTTTGCAACTGCAAGTGGATGA...ACAGTGGGATCGGAGTACATGATGGATGAAATTCCTTATGTGTTTTAGTGGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS-3UTR GCA 90 bp | ATTGCTCTATATCATGTATTTTGTTATCCTTCATGTAAGTCCACACTTCCCGCTGCTGTGCTTTGGCACTaGAGTACTTTCTGTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IALYHVFCYPSCKSTLPAAVLWH*STFCSC Trigger: ACAGGAACAGAAAGTACTGCAGTGCCAAAGCACAGC...AGCGGGAAGTGTGGACTTACATGAAGGATAACAAAATACATGATATAGAGCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140898.8 |
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| CDS-3UTR CCA 90 bp | CGCAGCCATAACGAACTTCATGTCGACAAATATCAAATTGACATTGTTTATGAATGCAAACACTGTGGATaGCAGAGGACTCTCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSHNELHVDKYQIDIVYECKHCG*QRTLIH Trigger: GTGGATGAGAGTCCTCTGCCATCCACAGTGTTTGCA...TTCATAAACAATGTCAATTTGATATTTGTCGACATGAAGTTCGTTATGGCTGCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| CDS-3UTR CCA 90 bp | GAGACAGACAAATACAGAAAAACCCATTTAACAGACACTAGTGCTAAATGGTTACCACACATCCAGCAGTaGAAGTCCACAGTGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ETDKYRKTHLTDTSAKWLPHIQQ*KSTVTS Trigger: TGAAGTCACTGTGGACTTCCACTGCTGGATGTGTGG...TAACCATTTAGCACTAGTGTCTGTTAAATGGGTTTTTCTGTATTTGTCTGTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS-3UTR TCA 90 bp | GAGACAGACAAATACAGAAAAACCCATTTAACAGACACTAGTGCTAAATGGTTACCAGCTCACTCCCAATaGCATGAGAAAAACTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: ETDKYRKTHLTDTSAKWLPAHSQ*HEKNWM Trigger: CATCCAGTTTTTCTCATGTCATTGGGAGTGAGCTGG...TAACCATTTAGCACTAGTGTCTGTTAAATGGGTTTTTCTGTATTTGTCTGTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR GCA 90 bp | AGCAATATTGGTCCATACACTACACAATACCAGCAGTACAAGTTGAATCTTTCAGTAGACCTTCCTTTATaGTGTGCTGCCTCTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SNIGPYTTQYQQYKLNLSVDLPL*CAASFF Trigger: GAAGAAAGAGGCAGCACAGCATAAAGGAAGGTCTAC...TGAAAGATTCAACTTGTACTGCTGGTATTGTGTAGTGTATGGACCAATATTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS-3UTR GCA 90 bp | AGCAATATTGGTCCATACACTACACAATACCAGCAGTACAAGTTGAATCTTTCACCCGGCATGCTTGCTTaGAAACTTCTCCAATATTGT | + |
|
Preference number: 4 (lower is better) Translates to: SNIGPYTTQYQQYKLNLSPGMLA*KLLQYC Trigger: ACAATATTGGAGAAGTTTGCAAGCAAGCATGCCGGG...TGAAAGATTCAACTTGTACTGCTGGTATTGTGTAGTGTATGGACCAATATTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR CCA 90 bp | AGCAATATTGGTCCATACACTACACAATACCAGCAGTACAAGTTGAATCTTTCATGCACAGATCTCGTTTaGATTCAGTCACTGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: SNIGPYTTQYQQYKLNLSCTDLV*IQSLKM Trigger: CATTTTCAGTGACTGAATCCAAACGAGATCTGTGCA...TGAAAGATTCAACTTGTACTGCTGGTATTGTGTAGTGTATGGACCAATATTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS-3UTR CAA 90 bp | GGCAGCAAGTCCCTTCGCCATCTGATGCCAGTGGCTCCGCAAGAGCTTAGCCAGCTGACCACAGTAAGGTaGATCTTTCCATTGCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSKSLRHLMPVAPQELSQLTTVR*IFPLPP Trigger: TGGGGGCAATGGAAAGATCAACCTTACTGTGGTCAG...CTGGCTAAGCTCTTGCGGAGCCACTGGCATCAGATGGCGAAGGGACTTGCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS-3UTR CAA 90 bp | CAACCTGGCAGCAAGTCCCTTCGCCATCTGATGCCAGTGGCTCCGCAAGAGCTTGGATCTTCCCTCCATTaGCAAACACTGTGGATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QPGSKSLRHLMPVAPQELGSSLH*QTLWMA Trigger: TGCCATCCACAGTGTTTGCAAATGGAGGGAAGATCC...AAGCTCTTGCGGAGCCACTGGCATCAGATGGCGAAGGGACTTGCTGCCAGGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS-3UTR CAA 90 bp | GTGGCTCCGCAAGAGCTTAGCCAGGCCTGTCAAACAGCCTTTTTCCTATCTACTGCAGATCTGGCAAGCTaGCCTCAGCTCGTGGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VAPQELSQACQTAFFLSTADLAS*PQLVGS Trigger: GGAACCCACGAGCTGAGGCAAGCTTGCCAGATCTGC...AGTAGATAGGAAAAAGGCTGTTTGACAGGCCTGGCTAAGCTCTTGCGGAGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS-3UTR CAA 90 bp | GGCAGCAAGTCCCTTCGCCATCTGATGCCAGTGGCTCCGCAAGAGCTTAGCCAGGTCTGGTTCAATGACTaGGCCATTTCTCAGACACTG | + |
|
Preference number: 5 (lower is better) Translates to: GSKSLRHLMPVAPQELSQVWFND*AISQTL Trigger: CAGTGTCTGAGAAATGGCCAAGTCATTGAACCAGAC...CTGGCTAAGCTCTTGCGGAGCCACTGGCATCAGATGGCGAAGGGACTTGCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS-3UTR CAA 90 bp | CCCCAGCACACCTCATCCGAGCTTCTGTCCAACAGACAGCAACCTGGCAGCAAGTTCCGATACAGAGCCTaGCAGTTACTGGCATTAACA | + |
|
Preference number: 5 (lower is better) Translates to: PQHTSSELLSNRQQPGSKFRYRA*QLLALT Trigger: TGTTAATGCCAGTAACTGCAAGGCTCTGTATCGGAA...CTTGCTGCCAGGTTGCTGTCTGTTGGACAGAAGCTCGGATGAGGTGTGCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS-3UTR CAA 90 bp | CACTGCTGTGGCTCTGACCTCAGAGTCATCCTCAACCTTACCCCTTCCCCAGCAAAAGTGCTTCTTGCCTaGGGGCTAACAAATCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HCCGSDLRVILNLTPSPAKVLLA*GLTNLA Trigger: AGCCAGATTTGTTAGCCCCAAGGCAAGAAGCACTTT...TGCTGGGGAAGGGGTAAGGTTGAGGATGACTCTGAGGTCAGAGCCACAGCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR CAA 90 bp | CAACCTGGCAGCAAGTCCCTTCGCCATCTGATGCCAGTGGCTCCGCAAGAGCTTAGGACTCTCATCCACTaGCAGTTGCAAAACAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: QPGSKSLRHLMPVAPQELRTLIH*QLQNRS Trigger: ACTTCTGTTTTGCAACTGCAAGTGGATGAGAGTCCT...AAGCTCTTGCGGAGCCACTGGCATCAGATGGCGAAGGGACTTGCTGCCAGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS-3UTR CAA 90 bp | ATATTCAAGCAACTGAGAAGACGCCTCCTCTCTGACCCTAAGCAGCAGGAGCTCAGGGCTCAGGATACCTaGTACCCATGGGCAAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IFKQLRRRLLSDPKQQELRAQDT*YPWARF Trigger: GAACCTTGCCCATGGGTACAAGGTATCCTGAGCCCT...GAGCTCCTGCTGCTTAGGGTCAGAGAGGAGGCGTCTTCTCAGTTGCTTGAATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| CDS-3UTR CAA 90 bp | TACTGTGGGTTGCTGCTCAGGAGGAACGATAGATGCCAATCAAGCAGAAATCTGCTGCTAAGGAGCACTTaGCCACAGCGTCGTAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: YCGLLLRRNDRCQSSRNLLLRST*PQRRRP Trigger: AGGCCTACGACGCTGTGGCAAAGTGCTCCTTAGCAG...CAGATTTCTGCTTGATTGGCATCTATCGTTCCTCCTGAGCAGCAACCCACAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS-3UTR CAA 90 bp | TCCACACTTCCCGCTCCTCTGGACTATGAGCAAAGGAACAGTTGCCAACATACTGGTTCCAAGCAGGGATaGTGTCCTGAAGGGCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: STLPAPLDYEQRNSCQHTGSKQG*CPEGQA Trigger: AGCTTGCCCTTCAGGACACAATCCCTGCTTGGAACC...AGTATGTTGGCAACTGTTCCTTTGCTCATAGTCCAGAGGAGCGGGAAGTGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| CDS-3UTR CAA 90 bp | TTACCCCTTCCCCAGCACACCTCATCCGAGCTTCTGTCCAACAGACAGCAACCTAGGGAGGAATTACTGTaGTTAAGCGGTGTTCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPLPQHTSSELLSNRQQPREELL*LSGVPS Trigger: AGAGGGAACACCGCTTAACAACAGTAATTCCTCCCT...AGGTTGCTGTCTGTTGGACAGAAGCTCGGATGAGGTGTGCTGGGGAAGGGGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS CCA 90 bp | TACACCGCATACTGCTCCTGGGTCCCAGGATATGACAGCGGAGACTaGATGAACTGTAGACCTTCCTTTATGCTGTGCTGCCTCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: YTAYCSWVPGYDSGD*MNCRPSFMLCCLFL Trigger: AAGAAAGAGGCAGCACAGCATAAAGGAAGGTCTACAGTTCATCCAGTCTCCGCTGTCATATCCTGGGACCCAGGAGCAGTATGCGGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000037633.16 ENSMUST00000125537.9 ENSMUST00000128083.9 ENSMUST00000130355.9 ENSMUST00000138185.9 ENSMUST00000140755.9 ENSMUST00000142389.3 |
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| CDS-3UTR CAA 90 bp | CCCACTGTGCATTACACTCACTGCTGTGGCTCTGACCTCAGAGTCATCCTCAACAGAGGAGATGTGGTCTaGCCATTGCTTCTCACTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PTVHYTHCCGSDLRVILNRGDVV*PLLLTV Trigger: AACAGTGAGAAGCAATGGCAAGACCACATCTCCTCT...GTTGAGGATGACTCTGAGGTCAGAGCCACAGCAGTGAGTGTAATGCACAGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS TCA 90 bp | TGCTTCCTTCTGTGCAGGAGCCATTTATATACCTCTCACAAATACTaGAGTACCCAGTGGGGAAGCGGTGCTGCCAGCAGTACTGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CFLLCRSHLYTSHKY*STQWGSGAASSTGH Trigger: ATGACCAGTACTGCTGGCAGCACCGCTTCCCCACTGGGTACTTCAGTATTTGTGAGAGGTATATAAATGGCTCCTGCACAGAAGGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS-3UTR CAA 90 bp | CAACCTGGCAGCAAGTCCCTTCGCCATCTGATGCCAGTGGCTCCGCAAGAGCTTATGGTCCTTCATAATTaGTTTTTGTTGGTCTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QPGSKSLRHLMPVAPQELMVLHN*FLLVLD Trigger: GTCCAAGACCAACAAAAACAAATTATGAAGGACCAT...AAGCTCTTGCGGAGCCACTGGCATCAGATGGCGAAGGGACTTGCTGCCAGGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS-3UTR CAA 90 bp | CCACACTTCCCGCTCCTCTGGACTATGAGCAAAGGAACAGTTGCCAACATACTGGTCTGGTTCAATGACTaGGCCATTTCTCAGACACTG | + |
|
Preference number: 5 (lower is better) Translates to: PHFPLLWTMSKGTVANILVWFND*AISQTL Trigger: CAGTGTCTGAGAAATGGCCAAGTCATTGAACCAGAC...CAGTATGTTGGCAACTGTTCCTTTGCTCATAGTCCAGAGGAGCGGGAAGTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140898.8 |
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| CDS-3UTR CAA 90 bp | TGTAAGTCCACACTTCCCGCTCCTCTGGACTATGAGCAAAGGAACAGTTGCCAACACGAATGCTGTGCTTaGGCACTGCAGTACTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CKSTLPAPLDYEQRNSCQHECCA*ALQYFL Trigger: CAGAAAGTACTGCAGTGCCAAAGCACAGCATTCGTG...TTGGCAACTGTTCCTTTGCTCATAGTCCAGAGGAGCGGGAAGTGTGGACTTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140898.8 |
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| CDS TCA 90 bp | GTTACCGGCATAATAGGAACAGAGGCCAGCTCACTCCCAATGACATaGGAAAAACTGGATGTAGGAAGGGAGGCAACCGAAAGTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VTGIIGTEASSLPMT*EKLDVGREATESAS Trigger: AGAAGCACTTTCGGTTGCCTCCCTTCCTACATCCAGTTTTTCTCATGTCATTGGGAGTGAGCTGGCCTCTGTTCCTATTATGCCGGTAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037633.16 ENSMUST00000128083.9 ENSMUST00000138185.9 ENSMUST00000140755.9 |
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| CDS GCA 90 bp | CCTCCATTTGCAAACACTGTGGATGGCAGAGGACTCTCATCCACTTaGAGTTGCAAAACAGAAGTTACCGGCATAATAGGAACAGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PPFANTVDGRGLSST*SCKTEVTGIIGTEA Trigger: GGCCTCTGTTCCTATTATGCCGGTAACTTCTGTTTTGCAACTGCAAGTGGATGAGAGTCCTCTGCCATCCACAGTGTTTGCAAATGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037633.16 ENSMUST00000128083.9 ENSMUST00000138185.9 ENSMUST00000140755.9 |
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| CDS GCA 90 bp | ATCCAGAAAAGCATCGGATATGGTGAAGGGGATCTTCCCTCCATTTaGAAACACTGTGGATGGCAGAGGACTCTCATCCACTTGCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: IQKSIGYGEGDLPSI*KHCGWQRTLIHLQL Trigger: CAACTGCAAGTGGATGAGAGTCCTCTGCCATCCACAGTGTTTGCAAATGGAGGGAAGATCCCCTTCACCATATCCGATGCTTTTCTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037633.16 ENSMUST00000128083.9 ENSMUST00000138185.9 ENSMUST00000140755.9 |
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| CDS GCA 90 bp | TGCCAGCAGTACTGGTCATCCTCAGTGTGGAAAACCTTCTCCTTGTaGTTCTCAGAGGAGATGTGGTCTTGCCATTGCTTCTCACTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: CQQYWSSSVWKTFSL*FSEEMWSCHCFSLL Trigger: TAACAGTGAGAAGCAATGGCAAGACCACATCTCCTCTGAGAAGCACAAGGAGAAGGTTTTCCACACTGAGGATGACCAGTACTGCTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS GCA 90 bp | TTTATATACCTCTCACAAATACTGAAGTACCCAGTGGGGAAGCGGTaGTGCCAGCAGTACTGGTCATCCTCAGTGTGGAAAACCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FIYLSQILKYPVGKR*CQQYWSSSVWKTFS Trigger: GGAGAAGGTTTTCCACACTGAGGATGACCAGTACTGCTGGCAGCACCGCTTCCCCACTGGGTACTTCAGTATTTGTGAGAGGTATATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS CCA 90 bp | ACACATCCAGCAGTGGAAGTCCACAGTGACTTCAGCATAGTCTGTTaGCATATGGATCTGCTTCCCGTTTTCTTTGCTACAGTGACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: THPAVEVHSDFSIVC*HMDLLPVFFATVTG Trigger: GCCAGTCACTGTAGCAAAGAAAACGGGAAGCAGATCCATATGCCAACAGACTATGCTGAAGTCACTGTGGACTTCCACTGCTGGATGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS-3UTR CAA 90 bp | ATATTCAAGCAACTGAGAAGACGCCTCCTCTCTGACCCTAAGCAGCAGGAGCTCTTCCGATACAGAGCCTaGCAGTTACTGGCATTAACA | + |
|
Preference number: 5 (lower is better) Translates to: IFKQLRRRLLSDPKQQELFRYRA*QLLALT Trigger: TGTTAATGCCAGTAACTGCAAGGCTCTGTATCGGAA...GAGCTCCTGCTGCTTAGGGTCAGAGAGGAGGCGTCTTCTCAGTTGCTTGAATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| CDS-3UTR CAA 90 bp | TACTGTGGGTTGCTGCTCAGGAGGAACGATAGATGCCAATCAAGCAGAAATCTGCACGAATGCTGTGCTTaGGCACTGCAGTACTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: YCGLLLRRNDRCQSSRNLHECCA*ALQYFL Trigger: CAGAAAGTACTGCAGTGCCAAAGCACAGCATTCGTG...CAGATTTCTGCTTGATTGGCATCTATCGTTCCTCCTGAGCAGCAACCCACAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS-3UTR CAA 90 bp | GTGGCTCCGCAAGAGCTTAGCCAGGCCTGTCAAACAGCCTTTTTCCTATCTACTTCTTTCCGTGCTTTCTaGAATTTCATCTGTAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VAPQELSQACQTAFFLSTSFRAF*NFICRA Trigger: GGCCCTACAGATGAAATTCAAGAAAGCACGGAAAGA...AGTAGATAGGAAAAAGGCTGTTTGACAGGCCTGGCTAAGCTCTTGCGGAGCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS GCA 90 bp | TTTGCAAACACTGTGGATGGCAGAGGACTCTCATCCACTTGCAGTTaGAAAACAGAAGTTACCGGCATAATAGGAACAGAGGCCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FANTVDGRGLSSTCS*KTEVTGIIGTEASS Trigger: TGAGCTGGCCTCTGTTCCTATTATGCCGGTAACTTCTGTTTTGCAACTGCAAGTGGATGAGAGTCCTCTGCCATCCACAGTGTTTGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037633.16 ENSMUST00000128083.9 ENSMUST00000138185.9 ENSMUST00000140755.9 |
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| CDS CCA 90 bp | GGATATGGTGAAGGGGATCTTCCCTCCATTTGCAAACACTGTGGATaGCAGAGGACTCTCATCCACTTGCAGTTGCAAAACAGAAGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: GYGEGDLPSICKHCG*QRTLIHLQLQNRSY Trigger: GTAACTTCTGTTTTGCAACTGCAAGTGGATGAGAGTCCTCTGCCATCCACAGTGTTTGCAAATGGAGGGAAGATCCCCTTCACCATATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037633.16 ENSMUST00000128083.9 ENSMUST00000138185.9 ENSMUST00000140755.9 |
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| CDS-3UTR CAA 90 bp | TCCACTAAAACACATAAGGAATTTCATCCATCATGTACTCCGATCCCACTGTGCAGGGCTCAGGATACCTaGTACCCATGGGCAAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: STKTHKEFHPSCTPIPLCRAQDT*YPWARF Trigger: GAACCTTGCCCATGGGTACAAGGTATCCTGAGCCCT...GCACAGTGGGATCGGAGTACATGATGGATGAAATTCCTTATGTGTTTTAGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR CAA 90 bp | TTGCTGCTCAGGAGGAACGATAGATGCCAATCAAGCAGAAATCTGCAGCTCTTCAGGTTGATCTTTCCATaGCCCCCAAAGAAAGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLRRNDRCQSSRNLQLFRLIFP*PPKKAS Trigger: AGAGGCTTTCTTTGGGGGCAATGGAAAGATCAACCT...GAAGAGCTGCAGATTTCTGCTTGATTGGCATCTATCGTTCCTCCTGAGCAGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS CCA 90 bp | GGGTCCTCTGACCAGAGTGGAGGACATAACAGCATCATTTGTTTCTaGGGCAGAATCAAGAAGAGCATCTATTTCATCCCCAAGGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: GSSDQSGGHNSIICF*GRIKKSIYFIPKDN Trigger: ATTGTCCTTGGGGATGAAATAGATGCTCTTCTTGATTCTGCCCCAGAAACAAATGATGCTGTTATGTCCTCCACTCTGGTCAGAGGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037633.16 ENSMUST00000128083.9 ENSMUST00000138185.9 ENSMUST00000140755.9 |
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| CDS-3UTR CAA 90 bp | TTGCTCTATATCATGTATTTTGTTATCCTTCATGTAAGTCCACACTTCCCGCTCCTGCTAAGGAGCACTTaGCCACAGCGTCGTAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLYIMYFVILHVSPHFPLLLRST*PQRRRP Trigger: AGGCCTACGACGCTGTGGCAAAGTGCTCCTTAGCAG...GAGCGGGAAGTGTGGACTTACATGAAGGATAACAAAATACATGATATAGAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| CDS-3UTR CAA 90 bp | ATTCCACTAAAACACATAAGGAATTTCATCCATCATGTACTCCGATCCCACTGTGGTTCCAAGCAGGGATaGTGTCCTGAAGGGCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: IPLKHIRNFIHHVLRSHCGSKQG*CPEGQA Trigger: AGCTTGCCCTTCAGGACACAATCCCTGCTTGGAACC...ACAGTGGGATCGGAGTACATGATGGATGAAATTCCTTATGTGTTTTAGTGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR CAA 90 bp | CTTCCCGCTCCTCTGGACTATGAGCAAAGGAACAGTTGCCAACATACTGACACTTGGACAAGGCACTTATaGTCCTCAAATTCATGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LPAPLDYEQRNSCQHTDTWTRHL*SSNSCF Trigger: AAAGCATGAATTTGAGGACAATAAGTGCCTTGTCCA...AGTGTCAGTATGTTGGCAACTGTTCCTTTGCTCATAGTCCAGAGGAGCGGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140898.8 |
||
| CDS-3UTR CAA 90 bp | GTTCATCCACTTCTTACGTTCAAAAGACATCGCTCTCATTGCACGACGTTCTTTCTCATCCACTTGCAGTaGCAAAACAGAAGTTACCGG | + |
|
Preference number: 5 (lower is better) Translates to: VHPLLTFKRHRSHCTTFFLIHLQ*QNRSYR Trigger: CCGGTAACTTCTGTTTTGCAACTGCAAGTGGATGAG...AAAGAACGTCGTGCAATGAGAGCGATGTCTTTTGAACGTAAGAAGTGGATGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
||
| CDS-3UTR CAA 90 bp | ACACTTGCAATTTTTCTGGTCAGTGCTCTGATTGGGTTACATAAAAGCCAGCATCTCATCCACTTGCAGTaGCAAAACAGAAGTTACCGG | + |
|
Preference number: 5 (lower is better) Translates to: TLAIFLVSALIGLHKSQHLIHLQ*QNRSYR Trigger: CCGGTAACTTCTGTTTTGCAACTGCAAGTGGATGAG...ATGCTGGCTTTTATGTAACCCAATCAGAGCACTGACCAGAAAAATTGCAAGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
||
| CDS-3UTR CAA 90 bp | ATCGGCATTCATCATCTGCAGCAACATCTTTGCATATATAATATGGTCCTTCATGGATCTTCCCTCCATTaGCAAACACTGTGGATGGCA | + |
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Preference number: 5 (lower is better) Translates to: IGIHHLQQHLCIYNMVLHGSSLH*QTLWMA Trigger: TGCCATCCACAGTGTTTGCAAATGGAGGGAAGATCC...ATGAAGGACCATATTATATATGCAAAGATGTTGCTGCAGATGATGAATGCCGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| CDS-3UTR CAA 90 bp | ATTCCACTAAAACACATAAGGAATTTCATCCATCATGTACTCCGATCCCACTGTCTTCAGCATAGTCTGTaGGCATATGGATCTGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: IPLKHIRNFIHHVLRSHCLQHSL*AYGSAS Trigger: GGAAGCAGATCCATATGCCAACAGACTATGCTGAAG...ACAGTGGGATCGGAGTACATGATGGATGAAATTCCTTATGTGTTTTAGTGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS-3UTR CAA 90 bp | TTGCTCTATATCATGTATTTTGTTATCCTTCATGTAAGTCCACACTTCCCGCTCAGGACTCTCATCCACTaGCAGTTGCAAAACAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: LLYIMYFVILHVSPHFPLRTLIH*QLQNRS Trigger: ACTTCTGTTTTGCAACTGCAAGTGGATGAGAGTCCT...GAGCGGGAAGTGTGGACTTACATGAAGGATAACAAAATACATGATATAGAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140755.9 |
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| CDS-3UTR CAA 90 bp | AGCAATATTGGTCCATACACTACACAATACCAGCAGTACAAGTTGAATCTTTCAAAGGCATTTGTTTCTTaGTGGGGAGAGGACGGATGT | + |
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Preference number: 5 (lower is better) Translates to: SNIGPYTTQYQQYKLNLSKAFVS*WGEDGC Trigger: ACATCCGTCCTCTCCCCACAAAGAAACAAATGCCTT...TGAAAGATTCAACTTGTACTGCTGGTATTGTGTAGTGTATGGACCAATATTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS-3UTR CAA 90 bp | AGCAATATTGGTCCATACACTACACAATACCAGCAGTACAAGTTGAATCTTTCATGGAAAACCTTCTCCTaGTGCTTCTCAGAGGAGATG | + |
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Preference number: 5 (lower is better) Translates to: SNIGPYTTQYQQYKLNLSWKTFS*CFSEEM Trigger: CATCTCCTCTGAGAAGCACAAGGAGAAGGTTTTCCA...TGAAAGATTCAACTTGTACTGCTGGTATTGTGTAGTGTATGGACCAATATTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS-3UTR CAA 90 bp | ACACTTGCAATTTTTCTGGTCAGTGCTCTGATTGGGTTACATAAAAGCCAGCATTGGACAAGGCACTTATaGTCCTCAAATTCATGCTTT | + |
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Preference number: 5 (lower is better) Translates to: TLAIFLVSALIGLHKSQHWTRHL*SSNSCF Trigger: AAAGCATGAATTTGAGGACAATAAGTGCCTTGTCCA...ATGCTGGCTTTTATGTAACCCAATCAGAGCACTGACCAGAAAAATTGCAAGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS-3UTR CAA 90 bp | GAGACAGACAAATACAGAAAAACCCATTTAACAGACACTAGTGCTAAATGGTTAGATGTGGTCTTGCCATaGCTTCTCACTGTTACAGTT | + |
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Preference number: 5 (lower is better) Translates to: ETDKYRKTHLTDTSAKWLDVVLP*LLTVTV Trigger: AACTGTAACAGTGAGAAGCAATGGCAAGACCACATC...TAACCATTTAGCACTAGTGTCTGTTAAATGGGTTTTTCTGTATTTGTCTGTCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS TCA 90 bp | AGTCATTATCATTTGGGGCAATTAAGTGATCTTTCCGTGCTTTCTTaGATTTCATCTGTAGGGCCTTTCTTCTTTCTTCCCATTCATGAA | + |
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Preference number: 5 (lower is better) Translates to: SHYHLGQLSDLSVLS*ISSVGPFFFLPIHE Trigger: TTCATGAATGGGAAGAAAGAAGAAAGGCCCTACAGATGAAATTCAAGAAAGCACGGAAAGATCACTTAATTGCCCCAAATGATAATGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS CCA 72 bp | AAGTACCCAGTGGGGAAGCGGTGCTGCCAGCAGTACTaGTCATCCTCAGTGTGGAAAACCTTCTCCTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: KYPVGKRCCQQY*SSSVWKTFSLC Trigger: GCACAAGGAGAAGGTTTTCCACACTGAGGATGACCAGTACTGCTGGCAGCACCGCTTCCCCACTGGGTACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS TCA 72 bp | GCTCCTGGGTCCCAGGATATGACAGCGGAGACTGGATaGACTGTAGACCTTCCTTTATGCTGTGCTGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: APGSQDMTAETG*TVDLPLCCAAS Trigger: AGAGGCAGCACAGCATAAAGGAAGGTCTACAGTTCATCCAGTCTCCGCTGTCATATCCTGGGACCCAGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000037633.16 ENSMUST00000125537.9 ENSMUST00000128083.9 ENSMUST00000130355.9 ENSMUST00000138185.9 ENSMUST00000140755.9 ENSMUST00000142389.3 |
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| CDS CCA 72 bp | CTCACGAGAGCATGCAAATACACCGCATACTGCTCCTaGGTCCCAGGATATGACAGCGGAGACTGGATGAAC | + |
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Preference number: 6 (lower is better) Translates to: LTRACKYTAYCS*VPGYDSGDWMN Trigger: GTTCATCCAGTCTCCGCTGTCATATCCTGGGACCCAGGAGCAGTATGCGGTGTATTTGCATGCTCTCGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000037633.16 ENSMUST00000125537.9 ENSMUST00000128083.9 ENSMUST00000130355.9 ENSMUST00000138185.9 ENSMUST00000140755.9 ENSMUST00000142389.3 |
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| CDS GCA 72 bp | CTCTCACAAATACTGAAGTACCCAGTGGGGAAGCGGTaGTGCCAGCAGTACTGGTCATCCTCAGTGTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: LSQILKYPVGKR*CQQYWSSSVWK Trigger: TTTCCACACTGAGGATGACCAGTACTGCTGGCAGCACCGCTTCCCCACTGGGTACTTCAGTATTTGTGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS CCA 72 bp | TACTGCTCCTGGGTCCCAGGATATGACAGCGGAGACTaGATGAACTGTAGACCTTCCTTTATGCTGTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: YCSWVPGYDSGD*MNCRPSFMLCC Trigger: GCAGCACAGCATAAAGGAAGGTCTACAGTTCATCCAGTCTCCGCTGTCATATCCTGGGACCCAGGAGCAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000037633.16 ENSMUST00000125537.9 ENSMUST00000128083.9 ENSMUST00000130355.9 ENSMUST00000138185.9 ENSMUST00000140755.9 ENSMUST00000142389.3 |
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| CDS GCA 72 bp | AGCATCGGATATGGTGAAGGGGATCTTCCCTCCATTTaGAAACACTGTGGATGGCAGAGGACTCTCATCCAC | + |
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Preference number: 6 (lower is better) Translates to: SIGYGEGDLPSI*KHCGWQRTLIH Trigger: GTGGATGAGAGTCCTCTGCCATCCACAGTGTTTGCAAATGGAGGGAAGATCCCCTTCACCATATCCGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037633.16 ENSMUST00000128083.9 ENSMUST00000138185.9 ENSMUST00000140755.9 |
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| CDS GCA 72 bp | CTGGATGTAGGAAGGGAGGCAACCGAAAGTGCTTCTTaGCTTGGGGCTAACAAATCTGGCTCAATATCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LDVGREATESAS*LGANKSGSISS Trigger: GGAAGATATTGAGCCAGATTTGTTAGCCCCAAGGCAAGAAGCACTTTCGGTTGCCTCCCTTCCTACATCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037633.16 ENSMUST00000128083.9 ENSMUST00000138185.9 ENSMUST00000140755.9 |
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| CDS CCA 72 bp | GAAGGGGATCTTCCCTCCATTTGCAAACACTGTGGATaGCAGAGGACTCTCATCCACTTGCAGTTGCAAAAC | + |
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Preference number: 6 (lower is better) Translates to: EGDLPSICKHCG*QRTLIHLQLQN Trigger: GTTTTGCAACTGCAAGTGGATGAGAGTCCTCTGCCATCCACAGTGTTTGCAAATGGAGGGAAGATCCCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037633.16 ENSMUST00000128083.9 ENSMUST00000138185.9 ENSMUST00000140755.9 |
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| CDS CAA 90 bp | CCCTCCATTTGCAAACACTGTGGATGGCAGAGGACTCTCATCCACTaGCAGTTGCAAAACAGAAGTTACCGGCATAATAGGAACAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: PSICKHCGWQRTLIH*QLQNRSYRHNRNRG Trigger: GCCTCTGTTCCTATTATGCCGGTAACTTCTGTTTTGCAACTGCAAGTGGATGAGAGTCCTCTGCCATCCACAGTGTTTGCAAATGGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037633.16 ENSMUST00000128083.9 ENSMUST00000138185.9 ENSMUST00000140755.9 |
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| CDS GCA 72 bp | TACTGGTCATCCTCAGTGTGGAAAACCTTCTCCTTGTaGTTCTCAGAGGAGATGTGGTCTTGCCATTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: YWSSSVWKTFSL*FSEEMWSCHCF Trigger: GAAGCAATGGCAAGACCACATCTCCTCTGAGAAGCACAAGGAGAAGGTTTTCCACACTGAGGATGACCAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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| CDS TCA 72 bp | ATAATAGGAACAGAGGCCAGCTCACTCCCAATGACATaGGAAAAACTGGATGTAGGAAGGGAGGCAACCGAA | + |
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Preference number: 6 (lower is better) Translates to: IIGTEASSLPMT*EKLDVGREATE Trigger: TTCGGTTGCCTCCCTTCCTACATCCAGTTTTTCTCATGTCATTGGGAGTGAGCTGGCCTCTGTTCCTATTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037633.16 ENSMUST00000128083.9 ENSMUST00000138185.9 ENSMUST00000140755.9 |
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| CDS GCA 72 bp | ACTGTGGATGGCAGAGGACTCTCATCCACTTGCAGTTaGAAAACAGAAGTTACCGGCATAATAGGAACAGAG | + |
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Preference number: 6 (lower is better) Translates to: TVDGRGLSSTCS*KTEVTGIIGTE Trigger: CTCTGTTCCTATTATGCCGGTAACTTCTGTTTTGCAACTGCAAGTGGATGAGAGTCCTCTGCCATCCACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037633.16 ENSMUST00000128083.9 ENSMUST00000138185.9 ENSMUST00000140755.9 |
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| CDS GCA 72 bp | GCAAACACTGTGGATGGCAGAGGACTCTCATCCACTTaGAGTTGCAAAACAGAAGTTACCGGCATAATAGGA | + |
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Preference number: 6 (lower is better) Translates to: ANTVDGRGLSST*SCKTEVTGIIG Trigger: TCCTATTATGCCGGTAACTTCTGTTTTGCAACTGCAAGTGGATGAGAGTCCTCTGCCATCCACAGTGTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037633.16 ENSMUST00000128083.9 ENSMUST00000138185.9 ENSMUST00000140755.9 |
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| CDS CAA 72 bp | AAGTCACTTAGAGCCTTAGCCTTCCGATACAGAGCCTaGCAGTTACTGGCATTAACACTGAGGACAGCGTTA | + |
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Preference number: 6 (lower is better) Translates to: KSLRALAFRYRA*QLLALTLRTAL Trigger: TAACGCTGTCCTCAGTGTTAATGCCAGTAACTGCAAGGCTCTGTATCGGAAGGCTAAGGCTCTAAGTGACTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000037633.16 ENSMUST00000128083.9 ENSMUST00000130355.9 ENSMUST00000138185.9 ENSMUST00000140755.9 |
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| CDS CAA 72 bp | CACTGTGGATGGCAGAGGACTCTCATCCACTTGCAGTaGCAAAACAGAAGTTACCGGCATAATAGGAACAGA | + |
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Preference number: 6 (lower is better) Translates to: HCGWQRTLIHLQ*QNRSYRHNRNR Trigger: TCTGTTCCTATTATGCCGGTAACTTCTGTTTTGCAACTGCAAGTGGATGAGAGTCCTCTGCCATCCACAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037633.16 ENSMUST00000128083.9 ENSMUST00000138185.9 ENSMUST00000140755.9 |
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| CDS CAA 72 bp | TGCAAACACTGTGGATGGCAGAGGACTCTCATCCACTaGCAGTTGCAAAACAGAAGTTACCGGCATAATAGG | + |
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Preference number: 6 (lower is better) Translates to: CKHCGWQRTLIH*QLQNRSYRHNR Trigger: CCTATTATGCCGGTAACTTCTGTTTTGCAACTGCAAGTGGATGAGAGTCCTCTGCCATCCACAGTGTTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037633.16 ENSMUST00000128083.9 ENSMUST00000138185.9 ENSMUST00000140755.9 |
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| CDS CAA 90 bp | TTAATTTTATTACATGTTCATCCTGAGGCACTGCTAAGGAGCACTTaGCCACAGCGTCGTAGGCCTCTCTGTAGTGCCCTAAGTCACTTA | + |
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Preference number: 6 (lower is better) Translates to: LILLHVHPEALLRST*PQRRRPLCSALSHL Trigger: TAAGTGACTTAGGGCACTACAGAGAGGCCTACGACGCTGTGGCAAAGTGCTCCTTAGCAGTGCCTCAGGATGAACATGTAATAAAATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000037633.16 ENSMUST00000128083.9 ENSMUST00000130355.9 ENSMUST00000138185.9 ENSMUST00000140755.9 |
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| CDS GCA 72 bp | ATATGGTTGCATAGGTTCAAAAGACATCGCTCTCATTaGACGACGTTCTTTGGTCCACGAATGCTGTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: IWLHRFKRHRSH*TTFFGPRMLCF Trigger: AAAGCACAGCATTCGTGGACCAAAGAACGTCGTGCAATGAGAGCGATGTCTTTTGAACCTATGCAACCATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140898.8 |
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| CDS TCA 72 bp | CATTTGGGGCAATTAAGTGATCTTTCCGTGCTTTCTTaGATTTCATCTGTAGGGCCTTTCTTCTTTCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: HLGQLSDLSVLS*ISSVGPFFFLP Trigger: GGGAAGAAAGAAGAAAGGCCCTACAGATGAAATTCAAGAAAGCACGGAAAGATCACTTAATTGCCCCAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037633.16 |
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