Pregenerated sensors for ZC3H6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042851Ensembl transcript IDs: ENSMUST00000110319.3, ENSMUST00000110320.9
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CAGCCTGGAGTTCCCCGGGAAGCTAGAAAAACCACCAACCATTTCACTATTAGGCCAAAGTGCAAGCAGTaGAAGGGCCCTTCAAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: QPGVPREARKTTNHFTIRPKCKQ*KGPSRD Trigger: ATCTCTTGAAGGGCCCTTGCACTGCTTGCACTTTGG...CCTAATAGTGAAATGGTTGGTGGTTTTTCTAGCTTCCCGGGGAACTCCAGGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110319.3 |
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| 3UTR-3UTR TCA 90 bp | TTTTTACTCCCACTGCCAATGAAAACAGAAAGAGCAAGCACTGTCAAGGATGCAGGGCCCTTCAAGAGATaGACATATAAGCAAAAATGT | + |
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Preference number: 2 (lower is better) Translates to: FLLPLPMKTERASTVKDAGPFKR*TYKQKC Trigger: ACATTTTTGCTTATATGTTCATCTCTTGAAGGGCCC...TGCATCCTTGACAGTGCTTGCTCTTTCTGTTTTCATTGGCAGTGGGAGTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000110319.3 |
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| 3UTR GCA 72 bp | TTTACATCGATTTTAATCAGCCCAAAGTGCAAGCAGTaGAAGGGCCCTTCAAGAGATGAACATATAAGCAAA | + |
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Preference number: 3 (lower is better) Translates to: FTSILISPKCKQ*KGPSRDEHISK Trigger: TTTGCTTATATGTTCATCTCTTGAAGGGCCCTTGCACTGCTTGCACTTTGGGCTGATTAAAATCGATGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110319.3 |
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| 3UTR GCA 72 bp | AAAGACAATTTTACATCGATTTTAATCAGCCCAAAGTaGAAGCAGTGCAAGGGCCCTTCAAGAGATGAACAT | + |
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Preference number: 3 (lower is better) Translates to: KDNFTSILISPK*KQCKGPSRDEH Trigger: ATGTTCATCTCTTGAAGGGCCCTTGCACTGCTTGCACTTTGGGCTGATTAAAATCGATGTAAAATTGTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110319.3 |
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| CDS-3UTR CCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGACTCCCGGGGGTGGTTTaGGGAGAGGAGTTATGCCGC | + |
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Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRLPGVV*GEELCR Trigger: GCGGCATAACTCCTCTCCCCAAACCACCCCCGGGAG...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR TCA 90 bp | GTAACACAGCCATATCCAAAAGGAAAAACAGCGTGTGATCCGAGGGCCCTGGAGGGAGATGAACCACAGTaGTGGCTGAATTCTGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: VTQPYPKGKTACDPRALEGDEPQ*WLNSEK Trigger: TTTCTCAGAATTCAGCCATCACTGTGGTTCATCTCC...CTCCAGGGCCCTCGGATCACACGCTGTTTTTCCTTTTGGATATGGCTGTGTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110319.3 |
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| CDS-3UTR GCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGACCAGGGGAGCCTGGGTaGCTCACAGGACTCTCACAT | + |
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Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRPGEPG*LTGLSH Trigger: ATGTGAGAGTCCTGTGAGGCACCCAGGCTCCCCTGG...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAGCCGACTCCCGGGGGTaGTTTGGGGAGAGGAGTTAT | + |
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Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRADSRG*FGERSY Trigger: ATAACTCCTCTCCCCAAACCACCCCCGGGAGTCGGC...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR TCA 90 bp | GTAACACAGCCATATCCAAAAGGAAAAACAGCGTGTGATCCGAGGGCCCTGGAGATAAGATTCTGGAGATaGACCACAGTGATGGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: VTQPYPKGKTACDPRALEIRFWR*TTVMAE Trigger: TTCAGCCATCACTGTGGTTCATCTCCAGAATCTTAT...CTCCAGGGCCCTCGGATCACACGCTGTTTTTCCTTTTGGATATGGCTGTGTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110319.3 |
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| CDS-3UTR GCA 90 bp | GAAGCTAGAAAAACCACCAACCATTTCACTATTAGGCATATGTTCCAAGGAAATCAGCAGTCAGAGGGCTaGGGAGCAGGTCTGCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: EARKTTNHFTIRHMFQGNQQSEG*GAGLPL Trigger: CAGAGGCAGACCTGCTCCGCAGCCCTCTGACTGCTG...ATTTCCTTGGAACATATGCCTAATAGTGAAATGGTTGGTGGTTTTTCTAGCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110319.3 |
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| CDS-3UTR CCA 90 bp | CAGCCTGGAGTTCCCCGGGAAGCTAGAAAAACCACCAACCATTTCACTATTAGGAATCCCTGTAGGAGCTaGTTCTTTTCTTACGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: QPGVPREARKTTNHFTIRNPCRS*FFSYGN Trigger: GTTCCCGTAAGAAAAGAACCAGCTCCTACAGGGATT...CCTAATAGTGAAATGGTTGGTGGTTTTTCTAGCTTCCCGGGGAACTCCAGGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110319.3 |
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| CDS-3UTR CCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGATGGGCTTGCCTGTCCTaGTTCTCTTGCCTGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRWACLS*FSCLPW Trigger: CCAAGGCAGGCAAGAGAACCAGGACAGGCAAGCCCA...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR TCA 90 bp | CAGCCTGGAGTTCCCCGGGAAGCTAGAAAAACCACCAACCATTTCACTATTAGGAACCACAGTGATGGCTaGATTCTGAGAAAATGGAAC | + |
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Preference number: 4 (lower is better) Translates to: QPGVPREARKTTNHFTIRNHSDG*ILRKWN Trigger: GTTCCATTTTCTCAGAATTCAGCCATCACTGTGGTT...CCTAATAGTGAAATGGTTGGTGGTTTTTCTAGCTTCCCGGGGAACTCCAGGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110319.3 |
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| CDS-3UTR GCA 90 bp | GTAACACAGCCATATCCAAAAGGAAAAACAGCGTGTGATCCGAGGGCCCTGGAGTTCTTACGGGAACTTTaGATACGTTCAACATCTGAG | + |
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Preference number: 4 (lower is better) Translates to: VTQPYPKGKTACDPRALEFLREL*IRSTSE Trigger: CTCAGATGTTGAACGTATGCAAAGTTCCCGTAAGAA...CTCCAGGGCCCTCGGATCACACGCTGTTTTTCCTTTTGGATATGGCTGTGTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110319.3 |
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| CDS-3UTR CCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATAGTGTCCAGGGGAGCCTaGGTGCCTCACAGGACTCTC | + |
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Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIVSRGA*VPHRTL Trigger: GAGAGTCCTGTGAGGCACCCAGGCTCCCCTGGACAC...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATAGGTCCTACACAAGGGTaGTGTCCAGGGGAGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIGPTQG*CPGEPG Trigger: CCCAGGCTCCCCTGGACACCACCCTTGTGTAGGACC...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR GCA 90 bp | TTTTTACTCCCACTGCCAATGAAAACAGAAAGAGCAAGCACTGTCAAGGATGCACCATCTTCTCTGTCGTaGCCTGCATGTTCAGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: FLLPLPMKTERASTVKDAPSSLS*PACSES Trigger: AGACTCTGAACATGCAGGGCACGACAGAGAAGATGG...TGCATCCTTGACAGTGCTTGCTCTTTCTGTTTTCATTGGCAGTGGGAGTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110319.3 |
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| CDS-3UTR GCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAATGAAAAGAGCTCTCTaGACTGCAGGAGGGAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRMKRAL*TAGGSP Trigger: AGGGCTCCCTCCTGCAGTGCAGAGAGCTCTTTTCAT...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR TCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGACTGTGGTCCTGGTGGTaGGGTACTGTTGTAAAATGC | + |
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Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRLWSWW*GTVVKC Trigger: GCATTTTACAACAGTACCTCACCACCAGGACCACAG...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR TCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGATCCTGGACCTGGACTTaGCTCAGAACTGTACATACG | + |
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Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRSWTWT*LRTVHT Trigger: CGTATGTACAGTTCTGAGTCAAGTCCAGGTCCAGGA...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR TCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGATTTGGCTTTGGCTGCTaGTGTTGGATCAAGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRFGFGC*CWIKAQ Trigger: CTGAGCCTTGATCCAACATCAGCAGCCAAAGCCAAA...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR GCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGACCATCTTCTCTGTCGTaGCCTGCATGTTCAGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRPSSLS*PACSES Trigger: AGACTCTGAACATGCAGGGCACGACAGAGAAGATGG...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR GCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAGCTGTGGACAGTGACTaGTTTCCTCAAACTGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRAVDSD*FPQTVV Trigger: GACCACAGTTTGAGGAAAGCAGTCACTGTCCACAGC...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR GCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGACCTGGTTCTCTTGCCTaGCTTGGATCACTGTATGGA | + |
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Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRPGSLA*LGSLYG Trigger: TCCATACAGTGATCCAAGGCAGGCAAGAGAACCAGG...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAGTTCTCTTGCATTGGTaGACCAGGAGGTCCTACACA | + |
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Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRVLLHW*TRRSYT Trigger: TGTGTAGGACCTCCTGGTCCACCAATGCAAGAGAAC...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGATTGTCATTCTGCTGCTaGAATTGGGCCCACTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRLSFCC*NWAHSQ Trigger: TTGGGAGTGGGCCCAATTCCAGCAGCAGAATGACAA...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATAAAGCAGGGTTCCATCTaGCTAAGGGCAGGGCACTCC | + |
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Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIKQGSI*LRAGHS Trigger: GGAGTGCCCTGCCCTTAGCCAGATGGAACCCTGCTT...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGATGTCTGCATGTCTACTaGCCCATCAACAGGGACTTC | + |
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Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRCLHVY*PINRDF Trigger: GAAGTCCCTGTTGATGGGCCAGTAGACATGCAGACA...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR TCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATAAAACGGAAAATGCTCTaGTGGGGTCGGGAGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIKRKML*WGREKA Trigger: GGCCTTCTCCCGACCCCATCAGAGCATTTTCCGTTT...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR TCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATAGCAGACAGAGGGCAGTaGCTTGTCATTCTGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIADRGQ*LVILLL Trigger: CAGCAGCAGAATGACAAGTCACTGCCCTCTGTCTGC...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR TCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATATTGCTTGATGCTCTATaGGGCTGGGTGCCAGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKILLDAL*GWVPAG Trigger: ACCAGCTGGCACCCAGCCTCATAGAGCATCAAGCAA...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR TCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAATCTTCTTCCTTGCTTaGTGCTCTATGAGGCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRIFFLA*CSMRLG Trigger: ACCCAGCCTCATAGAGCATCAAGCAAGGAAGAAGAT...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR TCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATATGCACAGCAGGGACCTaGACCTTATCAGCACTCCTG | + |
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Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKICTAGT*TLSALL Trigger: CAGGAGTGCTGATAAGGTTCAGGTCCCTGCTGTGCA...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR GCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGATTCTCTGTCGTGCCCTaGATGTTCAGAGTCTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRFSVVP*MFRVCH Trigger: ATGACAGACTCTGAACATGCAGGGCACGACAGAGAA...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR GCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAAAAGATGGGTTCTCTTaGATTGGTGGACCAGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRKDGFS*IGGPGG Trigger: ACCTCCTGGTCCACCAATGCAAGAGAACCCATCTTT...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR GCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATAATCTGGGGTTGGGCTTaGCTGTCCTGGTTCTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIIWGWA*LSWFSC Trigger: GCAAGAGAACCAGGACAGGCAAGCCCAACCCCAGAT...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CCA 90 bp | CAGCCTGGAGTTCCCCGGGAAGCTAGAAAAACCACCAACCATTTCACTATTAGGACTATCATCACCAGATaGAGAGTTATGCTTATGTTT | + |
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Preference number: 4 (lower is better) Translates to: QPGVPREARKTTNHFTIRTIITR*RVMLMF Trigger: AAACATAAGCATAACTCTCCATCTGGTGATGATAGT...CCTAATAGTGAAATGGTTGGTGGTTTTTCTAGCTTCCCGGGGAACTCCAGGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110319.3 |
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| CDS-3UTR CCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATACTGTGTCACGAGCAATaGGAGGCTGCTGCTGTGCAA | + |
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Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKILCHEQ*EAAAVQ Trigger: TTGCACAGCAGCAGCCTCCCATTGCTCGTGACACAG...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGACTCTTTAGCGAGTCTTaGATCAGTAGGAACGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRLFSES*ISRNAE Trigger: CTCAGCGTTCCTACTGATCCAAGACTCGCTAAAGAG...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGATTCTCTTGCCTGCCTTaGATCACTGTATGGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRFSCLP*ITVWRS Trigger: AGACCTCCATACAGTGATCCAAGGCAGGCAAGAGAA...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR TCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATAGAAGCTGGAGAGCTGTaGCTCTCTCTAGGGACTTTC | + |
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Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIEAGEL*LSLGTF Trigger: GAAAGTCCCTAGAGAGAGTCACAGCTCTCCAGCTTC...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR GCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATAGGGAGGCTGCTGCTGTaGAAACTCTTCATGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIGRLLL*KLFMPH Trigger: ATGTGGCATGAAGAGTTTGCACAGCAGCAGCCTCCC...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR GCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGACTGAGAATATCTGTCTaGATGTCTACTGGCCCATCA | + |
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Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRLRISV*MSTGPS Trigger: TGATGGGCCAGTAGACATGCAGACAGATATTCTCAG...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAAATCCCTGTAGGAGCTaGTTCTTTTCTTACGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRNPCRS*FFSYGN Trigger: GTTCCCGTAAGAAAAGAACCAGCTCCTACAGGGATT...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATATGGGTTCTCTTGCATTaGTGGACCAGGAGGTCCTAC | + |
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Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIWVLLH*WTRRSY Trigger: GTAGGACCTCCTGGTCCACCAATGCAAGAGAACCCA...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATATTTCACCGAGTGTCCTaGAAAGCCCGGGGAATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIFHRVS*KARGMV Trigger: TACCATTCCCCGGGCTTTCCAGGACACTCGGTGAAA...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAGACTCAGTTTGGCTTTaGCTGCTGATGTTGGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRDSVWL*LLMLDQ Trigger: TTGATCCAACATCAGCAGCCAAAGCCAAACTGAGTC...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAGTGTTAGACTCAGTTTaGCTTTGGCTGCTGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRVLDSV*LWLLML Trigger: CAACATCAGCAGCCAAAGCCAAACTGAGTCTAACAC...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR CCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATACTTCTGAAGAGAGTTTaGGGGCATACAGGGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKILLKRV*GHTGEE Trigger: CTCCTCCCCTGTATGCCCCCAAACTCTCTTCAGAAG...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATATTCTTCATCTGGGGTTaGGCTTGCCTGTCCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIFFIWG*ACLSWF Trigger: GAACCAGGACAGGCAAGCCCAACCCCAGATGAAGAA...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR TCA 90 bp | GAAGCTAGAAAAACCACCAACCATTTCACTATTAGGCATATGTTCCAAGGAAATCATACGTTCAACATCTaGGTCCAGGCTGTAGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EARKTTNHFTIRHMFQGNHTFNI*VQAVVR Trigger: TCTGACTACAGCCTGGACTCAGATGTTGAACGTATG...ATTTCCTTGGAACATATGCCTAATAGTGAAATGGTTGGTGGTTTTTCTAGCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110319.3 |
||
| CDS-3UTR TCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATACATTTGCTGGTACAGTaGAGCTGGAGAGCTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIHLLVQ*SWRAVT Trigger: AGTCACAGCTCTCCAGCTTCACTGTACCAGCAAATG...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR TCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAGAGTTATCAGGTGGTTaGAAATTATGTGCAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRELSGG*KLCAAC Trigger: GCATGCTGCACATAATTTTCAACCACCTGATAACTC...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR TCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATATCTGAGTCAACGGGATaGAAAGAGCTCTCTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKISESTG*KELSAL Trigger: CAGTGCAGAGAGCTCTTTTCATCCCGTTGACTCAGA...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR GCA 90 bp | GAAGCTAGAAAAACCACCAACCATTTCACTATTAGGCATATGTTCCAAGGAAATTTCTCTGTCGTGCCCTaGATGTTCAGAGTCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EARKTTNHFTIRHMFQGNFSVVP*MFRVCH Trigger: ATGACAGACTCTGAACATGCAGGGCACGACAGAGAA...ATTTCCTTGGAACATATGCCTAATAGTGAAATGGTTGGTGGTTTTTCTAGCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110319.3 |
||
| CDS-3UTR GCA 90 bp | TTTTTACTCCCACTGCCAATGAAAACAGAAAGAGCAAGCACTGTCAAGGATGCACCAGATGGAGAGTTATaGTTATGTTTCTCGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLLPLPMKTERASTVKDAPDGEL*LCFSCF Trigger: GAAACACGAGAAACATAAGCATAACTCTCCATCTGG...TGCATCCTTGACAGTGCTTGCTCTTTCTGTTTTCATTGGCAGTGGGAGTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110319.3 |
||
| CDS-3UTR GCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATATGTAAGTCTCCAGACTaGTCTAAGCAGCCCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKICKSPD*SKQPSL Trigger: CAGAGAGGGCTGCTTAGAGCAGTCTGGAGACTTACA...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR CCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATAAGGCTGGGTGCCAGCTaGTTCTTCATCTTCTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIRLGAS*FFIFLV Trigger: TACCAAGAAGATGAAGAACCAGCTGGCACCCAGCCT...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATATGTGACCTTGGATCCTaGAGGACTATGCCAGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKICDLGS*RTMPGE Trigger: TTCACCTGGCATAGTCCTCCAGGATCCAAGGTCACA...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR TCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATACATACGTTCAACATCTaGGTCCAGGCTGTAGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIHTFNI*VQAVVR Trigger: TCTGACTACAGCCTGGACTCAGATGTTGAACGTATG...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR TCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAAAAGTCATCCATTCCTaGAAAGACATAAGGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRKVIHS*KDIRPF Trigger: AAAGGGCCTTATGTCTTTTCAGGAATGGATGACTTT...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR TCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATAATACGCTGTGGACAGTaGCTGCTTTCCTCAAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIIRCGQ*LLSSNC Trigger: ACAGTTTGAGGAAAGCAGTCACTGTCCACAGCGTAT...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR TCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATAGGACTCTCACATCCTTaGGGAACTTTAGATCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIGLSHP*GTLDPG Trigger: TCCAGGATCTAAAGTTCCTCAAGGATGTGAGAGTCC...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR TCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATAAAGCCTGTTAAGGCCTaGATAGGAAGACTGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIKPVKA*IGRLCT Trigger: TGTGCACAGTCTTCCTATTCAGGCCTTAACAGGCTT...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR GCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGATTCTTACGGGAACTTTaGATACGTTCAACATCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRFLREL*IRSTSE Trigger: CTCAGATGTTGAACGTATGCAAAGTTCCCGTAAGAA...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR GCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGATATCATCTTCTTCCTTaGTTGATGCTCTATGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRYHLLP*LMLYEA Trigger: AGCCTCATAGAGCATCAAGCAAGGAAGAAGATGATA...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR CCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGACAATTTCAGATGAACTaGGTAGCAAAGATGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRQFQMN*VAKMGS Trigger: AGAACCCATCTTTGCTACCCAGTTCATCTGAAATTG...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATATCACTAGGCATTTGCTaGTACAGTGAAGCTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKISLGIC*YSEAGE Trigger: CTCTCCAGCTTCACTGTACCAGCAAATGCCTAGTGA...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAAGCAGAGTTATCAGGTaGTTGAAAATTATGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRSRVIR*LKIMCS Trigger: GCTGCACATAATTTTCAACCACCTGATAACTCTGCT...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATATGCAGTAGTGTTCTGTaGTACGATCACTTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKICSSVL*YDHFSR Trigger: CCTGGAGAAGTGATCGTACCACAGAACACTACTGCA...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR TCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATATCCTCAGTATTGACTTaGCACCACTTCCTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKISSVLT*HHFLLP Trigger: AGGAAGAAGGAAGTGGTGTCAAGTCAATACTGAGGA...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR GCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATACCCTTTAATGACTCGTaGCCCACAGTGTTCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIPFNDS*PTVFFS Trigger: AGAAAAGAACACTGTGGGGCACGAGTCATTAAAGGG...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR GCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAACTTTTTCCCTGGTTTaGTGTACTCTTGAAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRTFSLV*CTLESH Trigger: ATGACTTTCAAGAGTACAGCAAACCAGGGAAAAAGT...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR GCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATATGTGCAAACTCTTCATaGCACATCTCATCAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKICANSS*HISSAE Trigger: CTCTGCTGATGAGATGTGGCATGAAGAGTTTGCACA...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR GCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGATTTGGATTTGTGATTTaGACCAGCATTTGTATGACG | + |
|
Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRFGFVI*TSICMT Trigger: CGTCATACAAATGCTGGTGCAAATCACAAATCCAAA...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAAGTATTTCAGCTGACTaGAGAAATCTTCTTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRSISAD*RNLLLL Trigger: AAGGAGAAGAAGATTTCTCCAGTCAGCTGAAATACT...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATAGACAGTCCGAAGTCTTaGGTCAACCACTTGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIDSPKS*VNHLIS Trigger: AGAAATCAAGTGGTTGACCCAAGACTTCGGACTGTC...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR TCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATAGGTTTGCTGTACTCTTaGAAGTCATCCATTCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIGLLYS*KSSIPE Trigger: TTCAGGAATGGATGACTTTCAAGAGTACAGCAAACC...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR TCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATATCTTCTTGGTATCTCTaGGTCAACGGGATGAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKISSWYL*VNGMKR Trigger: TCTTTTCATCCCGTTGACTCAGAGATACCAAGAAGA...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR TCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATAGTATTGGGCAGTCTATaGAGCCTAGGATCAAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIVLGSL*SLGSKF Trigger: GAATTTTGATCCTAGGCTTCATAGACTGCCCAATAC...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR GCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATAGGCTTTTTAATATCTTaGCTTGGGACAGTCCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIGFLIS*LGTVRS Trigger: ACTTCGGACTGTCCCAAGGCAAGATATTAAAAAGCC...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR GCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATAACTGGGACAGACTCATaGGGCTTTTTAATATCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKITGTDS*GFLISC Trigger: GCAAGATATTAAAAAGCCGCATGAGTCTGTCCCAGT...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR CCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAACTATCATCACCAGATaGAGAGTTATGCTTATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRTIITR*RVMLMF Trigger: AAACATAAGCATAACTCTCCATCTGGTGATGATAGT...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR CCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGATTAGTCAGATCATCATaGGAAAACTTACACTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRLVRSS*ENLHLS Trigger: AGACAAGTGTAAGTTTTCCCATGATGATCTGACTAA...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR CCA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAACTGTTGTAAAATGCTaGTGGTTTCTTCCCAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRTVVKC*WFLPNF Trigger: AAAATTGGGAAGAAACCACCAGCATTTTACAACAGT...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR GCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATACACTATGCATGTAAATaGAGTTCTCTCCTTTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIHYACK*SSLLWY Trigger: GTACCAAAGGAGAGAACTGCATTTACATGCATAGTG...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR CCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATATTTCTCCTGAAGAAATaGTTGATAGCTCCATTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIFLLKK*LIAPLQ Trigger: CTGCAATGGAGCTATCAACCATTTCTTCAGGAGAAA...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR TCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATACTTCTTTTGGATTTGTaGTTTGCACCAGCATTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKILLLDL*FAPAFV Trigger: TACAAATGCTGGTGCAAATCACAAATCCAAAAGAAG...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR CCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATACATCACTGTAGAAACTaGACTCAGCATATTCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKIHHCRN*TQHILY Trigger: GTAAAGAATATGCTGAGTCCAGTTTCTACAGTGATG...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR CCA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATATCTATGCTGAGAAAATaGAACATCATAATCCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: WHYTLISFVLTERILVKISMLRK*NIIIPV Trigger: TACAGGGATTATGATGTTCCATTTTCTCAGCATAGA...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS GCA 90 bp | CAGGAGGGAGCCCTGAAGCAGACAGAGGGCAGTGACTTGTCATTCTaGTGCTGGAATTGGGCCCACTCCCAAGGTGTGCTGTGTCACGAG | + |
|
Preference number: 5 (lower is better) Translates to: QEGALKQTEGSDLSF*CWNWAHSQGVLCHE Trigger: CTCGTGACACAGCACACCTTGGGAGTGGGCCCAATTCCAGCAGCAGAATGACAAGTCACTGCCCTCTGTCTGCTTCAGGGCTCCCTCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS GCA 90 bp | GAGGGAGCCCTGAAGCAGACAGAGGGCAGTGACTTGTCATTCTGCTaGTGGAATTGGGCCCACTCCCAAGGTGTGCTGTGTCACGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: EGALKQTEGSDLSFC*WNWAHSQGVLCHEQ Trigger: TTGCTCGTGACACAGCACACCTTGGGAGTGGGCCCAATTCCAGCAGCAGAATGACAAGTCACTGCCCTCTGTCTGCTTCAGGGCTCCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS CCA 90 bp | TGGTGGACCAGGAGGTCCTACACAAGGGTGGTGTCCAGGGGAGCCTaGGTGCCTCACAGGACTCTCACATCCTTGAGGAACTTTAGATCC | + |
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Preference number: 5 (lower is better) Translates to: WWTRRSYTRVVSRGA*VPHRTLTSLRNFRS Trigger: GGATCTAAAGTTCCTCAAGGATGTGAGAGTCCTGTGAGGCACCCAGGCTCCCCTGGACACCACCCTTGTGTAGGACCTCCTGGTCCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS CCA 90 bp | GGAGCCCTGAAGCAGACAGAGGGCAGTGACTTGTCATTCTGCTGCTaGAATTGGGCCCACTCCCAAGGTGTGCTGTGTCACGAGCAATGG | + |
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Preference number: 5 (lower is better) Translates to: GALKQTEGSDLSFCC*NWAHSQGVLCHEQW Trigger: CCATTGCTCGTGACACAGCACACCTTGGGAGTGGGCCCAATTCCAGCAGCAGAATGACAAGTCACTGCCCTCTGTCTGCTTCAGGGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS GCA 90 bp | TCACCGAGTGTCCTGGAAAGCCCGGGGAATGGTAAGCTCCACCCATaGTTGGTAGCGTGTCCAGCTGAACAAGCCCTCCAGCTTGACTAT | + |
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Preference number: 5 (lower is better) Translates to: SPSVLESPGNGKLHP*LVACPAEQALQLDY Trigger: ATAGTCAAGCTGGAGGGCTTGTTCAGCTGGACACGCTACCAAGCATGGGTGGAGCTTACCATTCCCCGGGCTTTCCAGGACACTCGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS CCA 90 bp | CTGAAGCAGACAGAGGGCAGTGACTTGTCATTCTGCTGCTGGAATTaGGCCCACTCCCAAGGTGTGCTGTGTCACGAGCAATGGGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: LKQTEGSDLSFCCWN*AHSQGVLCHEQWEA Trigger: AGCCTCCCATTGCTCGTGACACAGCACACCTTGGGAGTGGGCCCAATTCCAGCAGCAGAATGACAAGTCACTGCCCTCTGTCTGCTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS GCA 90 bp | GTGACTTGTCATTCTGCTGCTGGAATTGGGCCCACTCCCAAGGTGTaGTGTGTCACGAGCAATGGGAGGCTGCTGCTGTGCAAACTCTTC | + |
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Preference number: 5 (lower is better) Translates to: VTCHSAAGIGPTPKV*CVTSNGRLLLCKLF Trigger: GAAGAGTTTGCACAGCAGCAGCCTCCCATTGCTCGTGACACAGCACACCTTGGGAGTGGGCCCAATTCCAGCAGCAGAATGACAAGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS CCA 90 bp | TGCTGGAATTGGGCCCACTCCCAAGGTGTGCTGTGTCACGAGCAATaGGAGGCTGCTGCTGTGCAAACTCTTCATGCCACATCTCATCAG | + |
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Preference number: 5 (lower is better) Translates to: CWNWAHSQGVLCHEQ*EAAAVQTLHATSHQ Trigger: CTGATGAGATGTGGCATGAAGAGTTTGCACAGCAGCAGCCTCCCATTGCTCGTGACACAGCACACCTTGGGAGTGGGCCCAATTCCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS TCA 90 bp | TGGTGTCCAGGGGAGCCTGGGTGCCTCACAGGACTCTCACATCCTTaGGGAACTTTAGATCCTGGACCTGGACTTGACTCAGAACTGTAC | + |
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Preference number: 5 (lower is better) Translates to: WCPGEPGCLTGLSHP*GTLDPGPGLDSELY Trigger: GTACAGTTCTGAGTCAAGTCCAGGTCCAGGATCTAAAGTTCCTCAAGGATGTGAGAGTCCTGTGAGGCACCCAGGCTCCCCTGGACACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS GCA 90 bp | GGCCCACTCCCAAGGTGTGCTGTGTCACGAGCAATGGGAGGCTGCTaGTGTGCAAACTCTTCATGCCACATCTCATCAGCAGAGTTATCA | + |
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Preference number: 5 (lower is better) Translates to: GPLPRCAVSRAMGGC*CANSSCHISSAELS Trigger: TGATAACTCTGCTGATGAGATGTGGCATGAAGAGTTTGCACAGCAGCAGCCTCCCATTGCTCGTGACACAGCACACCTTGGGAGTGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS GCA 90 bp | TTGGGCCCACTCCCAAGGTGTGCTGTGTCACGAGCAATGGGAGGCTaGTGCTGTGCAAACTCTTCATGCCACATCTCATCAGCAGAGTTA | + |
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Preference number: 5 (lower is better) Translates to: LGPLPRCAVSRAMGG*CCANSSCHISSAEL Trigger: TAACTCTGCTGATGAGATGTGGCATGAAGAGTTTGCACAGCAGCAGCCTCCCATTGCTCGTGACACAGCACACCTTGGGAGTGGGCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS GCA 90 bp | GGGCCTACAATTTCAGATGAACTGGGTAGCAAAGATGGGTTCTCTTaGATTGGTGGACCAGGAGGTCCTACACAAGGGTGGTGTCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: GPTISDELGSKDGFS*IGGPGGPTQGWCPG Trigger: CCCTGGACACCACCCTTGTGTAGGACCTCCTGGTCCACCAATGCAAGAGAACCCATCTTTGCTACCCAGTTCATCTGAAATTGTAGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS GCA 90 bp | ACTCCCAAGGTGTGCTGTGTCACGAGCAATGGGAGGCTGCTGCTGTaGAAACTCTTCATGCCACATCTCATCAGCAGAGTTATCAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: TPKVCCVTSNGRLLL*KLFMPHLISRVIRW Trigger: CCACCTGATAACTCTGCTGATGAGATGTGGCATGAAGAGTTTGCACAGCAGCAGCCTCCCATTGCTCGTGACACAGCACACCTTGGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS TCA 90 bp | CCTGGACCTGGACTTGACTCAGAACTGTACATACGCTGTGGACAGTaGCTGCTTTCCTCAAACTGTGGTCCTGGTGGTGAGGTACTGTTG | + |
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Preference number: 5 (lower is better) Translates to: PGPGLDSELYIRCGQ*LLSSNCGPGGEVLL Trigger: CAACAGTACCTCACCACCAGGACCACAGTTTGAGGAAAGCAGTCACTGTCCACAGCGTATGTACAGTTCTGAGTCAAGTCCAGGTCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS TCA 90 bp | TGCCAGCTGGTTCTTCATCTTCTTGGTATCTCTGAGTCAACGGGATaGAAAGAGCTCTCTGCACTGCAGGAGGGAGCCCTGAAGCAGACA | + |
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Preference number: 5 (lower is better) Translates to: CQLVLHLLGISESTG*KELSALQEGALKQT Trigger: TGTCTGCTTCAGGGCTCCCTCCTGCAGTGCAGAGAGCTCTTTTCATCCCGTTGACTCAGAGATACCAAGAAGATGAAGAACCAGCTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS GCA 90 bp | GTTTCTTCATCTGGGGTTGGGCTTGCCTGTCCTGGTTCTCTTGCCTaGCTTGGATCACTGTATGGAGGTCTAAGTAAGCCTGTTAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: VSSSGVGLACPGSLA*LGSLYGGLSKPVKA Trigger: GGCCTTAACAGGCTTACTTAGACCTCCATACAGTGATCCAAGGCAGGCAAGAGAACCAGGACAGGCAAGCCCAACCCCAGATGAAGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS CCA 90 bp | ACTGCTCTAAGCAGCCCTCTCTGTGTGTTAGACTCAGTTTGGCTTTaGCTGCTGATGTTGGATCAAGGCTCAGGGCACCCTGATGATCAC | + |
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Preference number: 5 (lower is better) Translates to: TALSSPLCVLDSVWL*LLMLDQGSGHPDDH Trigger: GTGATCATCAGGGTGCCCTGAGCCTTGATCCAACATCAGCAGCCAAAGCCAAACTGAGTCTAACACACAGAGAGGGCTGCTTAGAGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS GCA 90 bp | TTCTTGGGGTCCCACACAAGTCTAAGGTCCACTGGGACAGACTCATaGGGCTTTTTAATATCTTGCCTTGGGACAGTCCGAAGTCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: FLGSHTSLRSTGTDS*GFLISCLGTVRSLG Trigger: CCCAAGACTTCGGACTGTCCCAAGGCAAGATATTAAAAAGCCGCATGAGTCTGTCCCAGTGGACCTTAGACTTGTGTGGGACCCCAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS CCA 90 bp | CAAGCCCTCCAGCTTGACTATGAGGGCCTACAATTTCAGATGAACTaGGTAGCAAAGATGGGTTCTCTTGCATTGGTGGACCAGGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: QALQLDYEGLQFQMN*VAKMGSLALVDQEV Trigger: GACCTCCTGGTCCACCAATGCAAGAGAACCCATCTTTGCTACCCAGTTCATCTGAAATTGTAGGCCCTCATAGTCAAGCTGGAGGGCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS GCA 90 bp | ATCTGTCTGCATGTCTACTGGCCCATCAACAGGGACTTCCAAGTTTaGAGTAGTGTTCTGTGGTACGATCACTTCTCCAGGAGAAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: ICLHVYWPINRDFQV*SSVLWYDHFSRRRL Trigger: CAGCCTTCTCCTGGAGAAGTGATCGTACCACAGAACACTACTGCAAACTTGGAAGTCCCTGTTGATGGGCCAGTAGACATGCAGACAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CAA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAACTCCCGGGGGTGGTTaGGGGAGAGGAGTTATGCCG | + |
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Preference number: 5 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRTPGGG*GRGVMP Trigger: CGGCATAACTCCTCTCCCCAAACCACCCCCGGGAGT...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS TCA 90 bp | AGGACTCTCACATCCTTGAGGAACTTTAGATCCTGGACCTGGACTTaGCTCAGAACTGTACATACGCTGTGGACAGTGACTGCTTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: RTLTSLRNFRSWTWT*LRTVHTLWTVTAFL Trigger: GAGGAAAGCAGTCACTGTCCACAGCGTATGTACAGTTCTGAGTCAAGTCCAGGTCCAGGATCTAAAGTTCCTCAAGGATGTGAGAGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS GCA 90 bp | GACCTGGACTTGACTCAGAACTGTACATACGCTGTGGACAGTGACTaGTTTCCTCAAACTGTGGTCCTGGTGGTGAGGTACTGTTGTAAA | + |
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Preference number: 5 (lower is better) Translates to: DLDLTQNCTYAVDSD*FPQTVVLVVRYCCK Trigger: TTTACAACAGTACCTCACCACCAGGACCACAGTTTGAGGAAAGCAGTCACTGTCCACAGCGTATGTACAGTTCTGAGTCAAGTCCAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CAA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGACATCTGGGGTTGGGCTaGCCTGTCCTGGTTCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRHLGLG*PVLVLL Trigger: CAAGAGAACCAGGACAGGCAAGCCCAACCCCAGATG...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS TCA 90 bp | ACGCTGTGGACAGTGACTGCTTTCCTCAAACTGTGGTCCTGGTGGTaGGGTACTGTTGTAAAATGCTGGTGGTTTCTTCCCAATTTTATG | + |
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Preference number: 5 (lower is better) Translates to: TLWTVTAFLKLWSWW*GTVVKCWWFLPNFM Trigger: CATAAAATTGGGAAGAAACCACCAGCATTTTACAACAGTACCTCACCACCAGGACCACAGTTTGAGGAAAGCAGTCACTGTCCACAGCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS CCA 90 bp | AAGGTCCACTGGGACAGACTCATGCGGCTTTTTAATATCTTGCCTTaGGACAGTCCGAAGTCTTGGGTCAACCACTTGATTTCTTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: KVHWDRLMRLFNILP*DSPKSWVNHLISFP Trigger: AGGAAAAGAAATCAAGTGGTTGACCCAAGACTTCGGACTGTCCCAAGGCAAGATATTAAAAAGCCGCATGAGTCTGTCCCAGTGGACCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CAA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGACCTGTCCTGGTTCTCTaGCCTGCCTTGGATCACTGT | + |
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Preference number: 5 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRPVLVL*PALDHC Trigger: ACAGTGATCCAAGGCAGGCAAGAGAACCAGGACAGG...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS TCA 90 bp | GGAGCTGGTTCTTTTCTTACGGGAACTTTGCATACGTTCAACATCTaGGTCCAGGCTGTAGTCAGAACTATCATCACCAGATGGAGAGTT | + |
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Preference number: 5 (lower is better) Translates to: GAGSFLTGTLHTFNI*VQAVVRTIITRWRV Trigger: AACTCTCCATCTGGTGATGATAGTTCTGACTACAGCCTGGACTCAGATGTTGAACGTATGCAAAGTTCCCGTAAGAAAAGAACCAGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110319.3 ENSMUST00000110320.9 |
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| CDS CCA 90 bp | TACTGGCCCATCAACAGGGACTTCCAAGTTTGCAGTAGTGTTCTGTaGTACGATCACTTCTCCAGGAGAAGGCTGGTTTTTATCACTATT | + |
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Preference number: 5 (lower is better) Translates to: YWPINRDFQVCSSVL*YDHFSRRRLVFITI Trigger: AATAGTGATAAAAACCAGCCTTCTCCTGGAGAAGTGATCGTACCACAGAACACTACTGCAAACTTGGAAGTCCCTGTTGATGGGCCAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CAA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAATGGGTTCTCTTGCATaGGTGGACCAGGAGGTCCTA | + |
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Preference number: 5 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRMGSLA*VDQEVL Trigger: TAGGACCTCCTGGTCCACCAATGCAAGAGAACCCAT...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS CCA 90 bp | ATGACCCTGAGGACTCCTGGGACTGTCGATAGTATTTCAGCTGACTaGAGAAATCTTCTTCTCCTTCCTGGTTACTATAGTTACCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: MTLRTPGTVDSISAD*RNLLLLPGYYSYQS Trigger: ACTTTGGTAACTATAGTAACCAGGAAGGAGAAGAAGATTTCTCCAGTCAGCTGAAATACTATCGACAGTCCCAGGAGTCCTCAGGGTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CAA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAAACAAGCCCTCCAGCTaGACTATGAGGGCCTACAAT | + |
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Preference number: 5 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRNKPSS*TMRAYN Trigger: ATTGTAGGCCCTCATAGTCAAGCTGGAGGGCTTGTT...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CAA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAGGACAGTCCGAAGTCTaGGGTCAACCACTTGATTTC | + |
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Preference number: 5 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRGQSEV*GQPLDF Trigger: GAAATCAAGTGGTTGACCCAAGACTTCGGACTGTCC...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CAA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAATCCTGGACCTGGACTaGACTCAGAACTGTACATAC | + |
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Preference number: 5 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRILDLD*TQNCTY Trigger: GTATGTACAGTTCTGAGTCAAGTCCAGGTCCAGGAT...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CAA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAGGGGGCAGAGGTAAGTaGATTGAAGATACTGGATCA | + |
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Preference number: 5 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRGGRGK*IEDTGS Trigger: TGATCCAGTATCTTCAATCAACTTACCTCTGCCCCC...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CAA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATACTTTGGCTGCTGATGTaGGATCAAGGCTCAGGGCAC | + |
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Preference number: 5 (lower is better) Translates to: WHYTLISFVLTERILVKILWLLM*DQGSGH Trigger: GTGCCCTGAGCCTTGATCCAACATCAGCAGCCAAAG...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CAA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATACCTTCTGAAGAGAGTTaGGGGGCATACAGGGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: WHYTLISFVLTERILVKIPSEES*GAYRGG Trigger: TCCTCCCCTGTATGCCCCCAAACTCTCTTCAGAAGG...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS CCA 90 bp | CTGTGCAAACTCTTCATGCCACATCTCATCAGCAGAGTTATCAGGTaGTTGAAAATTATGTGCAGCATGCTGTGGGTAGTAATCATCATA | + |
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Preference number: 5 (lower is better) Translates to: LCKLFMPHLISRVIR*LKIMCSMLWVVIII Trigger: TATGATGATTACTACCCACAGCATGCTGCACATAATTTTCAACCACCTGATAACTCTGCTGATGAGATGTGGCATGAAGAGTTTGCACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CAA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATACAAAGATGGGTTCTCTaGCATTGGTGGACCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WHYTLISFVLTERILVKIQRWVL*HWWTRR Trigger: CCTCCTGGTCCACCAATGCAAGAGAACCCATCTTTG...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CAA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGATGGTTCTTCATCTTCTaGGTATCTCTGAGTCAACGG | + |
|
Preference number: 5 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRWFFIF*VSLSQR Trigger: CCGTTGACTCAGAGATACCAAGAAGATGAAGAACCA...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CAA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAATCCTTTGCAGTCACTaGATGAGACTCTGTATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRILCSH*MRLCIG Trigger: CCCAATACAGAGTCTCATCAAGTGACTGCAAAGGAT...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CAA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATAGTTCTCTTGCCTGCCTaGGATCACTGTATGGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: WHYTLISFVLTERILVKIVLLPA*DHCMEV Trigger: GACCTCCATACAGTGATCCAAGGCAGGCAAGAGAAC...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CAA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATATTTCTTCATCTGGGGTaGGGCTTGCCTGTCCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: WHYTLISFVLTERILVKIFLHLG*GLPVLV Trigger: AACCAGGACAGGCAAGCCCAACCCCAGATGAAGAAA...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS CCA 90 bp | TACGTCTATGCTGAGAAAATGGAACATCATAATCCCTGTAGGAGCTaGTTCTTTTCTTACGGGAACTTTGCATACGTTCAACATCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: YVYAEKMEHHNPCRS*FFSYGNFAYVQHLS Trigger: ACTCAGATGTTGAACGTATGCAAAGTTCCCGTAAGAAAAGAACCAGCTCCTACAGGGATTATGATGTTCCATTTTCTCAGCATAGACGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS CCA 90 bp | TGGCTGAATTCTGAGAAAATGGAACATCATAATCCCTGTAGGAGCTaGTTCTTTTCTTACGGGAACTTTGCATACGTTCAACATCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: WLNSEKMEHHNPCRS*FFSYGNFAYVQHLS Trigger: ACTCAGATGTTGAACGTATGCAAAGTTCCCGTAAGAAAAGAACCAGCTCCTACAGGGATTATGATGTTCCATTTTCTCAGAATTCAGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110319.3 |
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| CDS-3UTR CAA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGACTCCTGAAGAAATGGTaGATAGCTCCATTGCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRLLKKW*IAPLQI Trigger: TATCTGCAATGGAGCTATCAACCATTTCTTCAGGAG...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS-3UTR CAA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGAATGCAGTTCTCTCCTTaGGTACAATATCCCTGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRMQFSP*VQYPCK Trigger: TTTACAGGGATATTGTACCAAAGGAGAGAACTGCAT...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR CAA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATACTTACACTTGTCTCCTaGGTAGCACTTTGCTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: WHYTLISFVLTERILVKILTLVS*VALCST Trigger: AGTGGAGCAAAGTGCTACCAAGGAGACAAGTGTAAG...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR CAA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATAGTCCTCAGTATTGACTaGACACCACTTCCTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: WHYTLISFVLTERILVKIVLSID*TPLPSS Trigger: GGAAGAAGGAAGTGGTGTCAAGTCAATACTGAGGAC...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR CAA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATACGGCTTTTTAATATCTaGCCTTGGGACAGTCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WHYTLISFVLTERILVKIRLFNI*PWDSPK Trigger: CTTCGGACTGTCCCAAGGCAAGATATTAAAAAGCCG...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR CAA 90 bp | TATAGAGGTAAACAAGTTACAAAACAGCAGAGATCTGTGATCGTCAGCGTGAGATTTTGGATTTGTGATTaGCACCAGCATTTGTATGAC | + |
|
Preference number: 5 (lower is better) Translates to: YRGKQVTKQQRSVIVSVRFWICD*HQHLYD Trigger: GTCATACAAATGCTGGTGCAAATCACAAATCCAAAA...TCTCACGCTGACGATCACAGATCTCTGCTGTTTTGTAACTTGTTTACCTCTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR CAA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATATCCGCATTCAACACTTaGTCCAAAAGTTTCCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: WHYTLISFVLTERILVKISAFNT*SKSFLV Trigger: AACAAGGAAACTTTTGGACAAAGTGTTGAATGCGGA...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR CAA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATAAGAGTTATCAGGTGGTaGAAAATTATGTGCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: WHYTLISFVLTERILVKIRVIRW*KIMCSM Trigger: CATGCTGCACATAATTTTCAACCACCTGATAACTCT...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR CAA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATACCCACACAATGTGTTTaGCAAAGTTGGGTTTGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: WHYTLISFVLTERILVKIPTQCV*QSWVCL Trigger: TAAACAAACCCAACTTTGCAAAACACATTGTGTGGG...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR CAA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATAGTATTCCATAATCTATaGAGCCTCTGGTCAGCTATA | + |
|
Preference number: 5 (lower is better) Translates to: WHYTLISFVLTERILVKIVFHNL*SLWSAI Trigger: TATAGCTGACCAGAGGCTCAATAGATTATGGAATAC...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS-3UTR CAA 90 bp | TGGCATTACACACTAATCAGTTTTGTGCTGACAGAAAGGATCCTAGTTAAAATAACCTCTTTCAGAGGTTaGTCATCTGTTTCTTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: WHYTLISFVLTERILVKITSFRG*SSVSSS Trigger: AGATGAAGAAACAGATGACAAACCTCTGAAAGAGGT...TATTTTAACTAGGATCCTTTCTGTCAGCACAAAACTGATTAGTGTGTAATGCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS GCA 72 bp | GTCCTGGAAAGCCCGGGGAATGGTAAGCTCCACCCATaGTTGGTAGCGTGTCCAGCTGAACAAGCCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VLESPGNGKLHP*LVACPAEQALQ Trigger: CTGGAGGGCTTGTTCAGCTGGACACGCTACCAAGCATGGGTGGAGCTTACCATTCCCCGGGCTTTCCAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS GCA 72 bp | CATTCTGCTGCTGGAATTGGGCCCACTCCCAAGGTGTaGTGTGTCACGAGCAATGGGAGGCTGCTGCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: HSAAGIGPTPKV*CVTSNGRLLLC Trigger: GCACAGCAGCAGCCTCCCATTGCTCGTGACACAGCACACCTTGGGAGTGGGCCCAATTCCAGCAGCAGAATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS CCA 72 bp | AGGAGGTCCTACACAAGGGTGGTGTCCAGGGGAGCCTaGGTGCCTCACAGGACTCTCACATCCTTGAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: RRSYTRVVSRGA*VPHRTLTSLRN Trigger: GTTCCTCAAGGATGTGAGAGTCCTGTGAGGCACCCAGGCTCCCCTGGACACCACCCTTGTGTAGGACCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS CAA 90 bp | CCGAGTGTCCTGGAAAGCCCGGGGAATGGTAAGCTCCACCCATGCTaGGTAGCGTGTCCAGCTGAACAAGCCCTCCAGCTTGACTATGAG | + |
|
Preference number: 6 (lower is better) Translates to: PSVLESPGNGKLHPC*VACPAEQALQLDYE Trigger: CTCATAGTCAAGCTGGAGGGCTTGTTCAGCTGGACACGCTACCAAGCATGGGTGGAGCTTACCATTCCCCGGGCTTTCCAGGACACTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS CCA 72 bp | TGGGCCCACTCCCAAGGTGTGCTGTGTCACGAGCAATaGGAGGCTGCTGCTGTGCAAACTCTTCATGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: WAHSQGVLCHEQ*EAAAVQTLHAT Trigger: TGTGGCATGAAGAGTTTGCACAGCAGCAGCCTCCCATTGCTCGTGACACAGCACACCTTGGGAGTGGGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS TCA 72 bp | GGGGAGCCTGGGTGCCTCACAGGACTCTCACATCCTTaGGGAACTTTAGATCCTGGACCTGGACTTGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: GEPGCLTGLSHP*GTLDPGPGLDS Trigger: TGAGTCAAGTCCAGGTCCAGGATCTAAAGTTCCTCAAGGATGTGAGAGTCCTGTGAGGCACCCAGGCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS CCA 72 bp | ACAGAGGGCAGTGACTTGTCATTCTGCTGCTGGAATTaGGCCCACTCCCAAGGTGTGCTGTGTCACGAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: TEGSDLSFCCWN*AHSQGVLCHEQ Trigger: TTGCTCGTGACACAGCACACCTTGGGAGTGGGCCCAATTCCAGCAGCAGAATGACAAGTCACTGCCCTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS CAA 90 bp | CTAGCTGAAGAGCCCCCAGGAGCACCTCCATTCCCTCTTAATTTCTaGGGGTCCCACACAAGTCTAAGGTCCACTGGGACAGACTCATGC | + |
|
Preference number: 6 (lower is better) Translates to: LAEEPPGAPPFPLNF*GSHTSLRSTGTDSC Trigger: GCATGAGTCTGTCCCAGTGGACCTTAGACTTGTGTGGGACCCCAAGAAATTAAGAGGGAATGGAGGTGCTCCTGGGGGCTCTTCAGCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS GCA 72 bp | GCTGAGCCTTGCATGGACTCAGAGTCGGCACTGCGTTaGATCTCACTAGGCATTTGCTGGTACAGTGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: AEPCMDSESALR*ISLGICWYSEA Trigger: AGCTTCACTGTACCAGCAAATGCCTAGTGAGATGCAACGCAGTGCCGACTCTGAGTCCATGCAAGGCTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS GCA 72 bp | CTCCCAAGGTGTGCTGTGTCACGAGCAATGGGAGGCTaGTGCTGTGCAAACTCTTCATGCCACATCTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: LPRCAVSRAMGG*CCANSSCHISS Trigger: TGATGAGATGTGGCATGAAGAGTTTGCACAGCAGCAGCCTCCCATTGCTCGTGACACAGCACACCTTGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS GCA 72 bp | TCTGGGGTTGGGCTTGCCTGTCCTGGTTCTCTTGCCTaGCTTGGATCACTGTATGGAGGTCTAAGTAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SGVGLACPGSLA*LGSLYGGLSKP Trigger: AGGCTTACTTAGACCTCCATACAGTGATCCAAGGCAGGCAAGAGAACCAGGACAGGCAAGCCCAACCCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS CCA 72 bp | AGCAGCCCTCTCTGTGTGTTAGACTCAGTTTGGCTTTaGCTGCTGATGTTGGATCAAGGCTCAGGGCACCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSPLCVLDSVWL*LLMLDQGSGHP Trigger: AGGGTGCCCTGAGCCTTGATCCAACATCAGCAGCCAAAGCCAAACTGAGTCTAACACACAGAGAGGGCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS GCA 72 bp | GTGTGCTGTGTCACGAGCAATGGGAGGCTGCTGCTGTaGAAACTCTTCATGCCACATCTCATCAGCAGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: VCCVTSNGRLLL*KLFMPHLISRV Trigger: AACTCTGCTGATGAGATGTGGCATGAAGAGTTTGCACAGCAGCAGCCTCCCATTGCTCGTGACACAGCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS CAA 90 bp | CTACAATTTCAGATGAACTGGGTAGCAAAGATGGGTTCTCTTGCATaGGTGGACCAGGAGGTCCTACACAAGGGTGGTGTCCAGGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LQFQMNWVAKMGSLA*VDQEVLHKGGVQGS Trigger: GCTCCCCTGGACACCACCCTTGTGTAGGACCTCCTGGTCCACCAATGCAAGAGAACCCATCTTTGCTACCCAGTTCATCTGAAATTGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS TCA 72 bp | GGACTTGACTCAGAACTGTACATACGCTGTGGACAGTaGCTGCTTTCCTCAAACTGTGGTCCTGGTGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GLDSELYIRCGQ*LLSSNCGPGGE Trigger: CTCACCACCAGGACCACAGTTTGAGGAAAGCAGTCACTGTCCACAGCGTATGTACAGTTCTGAGTCAAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS CAA 72 bp | GTCCACTGGGACAGACTCATGCGGCTTTTTAATATCTaGCCTTGGGACAGTCCGAAGTCTTGGGTCAACCAC | + |
|
Preference number: 6 (lower is better) Translates to: VHWDRLMRLFNI*PWDSPKSWVNH Trigger: GTGGTTGACCCAAGACTTCGGACTGTCCCAAGGCAAGATATTAAAAAGCCGCATGAGTCTGTCCCAGTGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS CAA 72 bp | TGCTCTAAGCAGCCCTCTCTGTGTGTTAGACTCAGTTaGGCTTTGGCTGCTGATGTTGGATCAAGGCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CSKQPSLCVRLS*ALAADVGSRLR Trigger: CCTGAGCCTTGATCCAACATCAGCAGCCAAAGCCAAACTGAGTCTAACACACAGAGAGGGCTGCTTAGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS TCA 72 bp | ACTGCGTTGCATCTCACTAGGCATTTGCTGGTACAGTaGAGCTGGAGAGCTGTGACTCTCTCTAGGGACTTT | + |
|
Preference number: 6 (lower is better) Translates to: TALHLTRHLLVQ*SWRAVTLSRDF Trigger: AAAGTCCCTAGAGAGAGTCACAGCTCTCCAGCTTCACTGTACCAGCAAATGCCTAGTGAGATGCAACGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS TCA 72 bp | TGGGTGCCAGCTGGTTCTTCATCTTCTTGGTATCTCTaGGTCAACGGGATGAAAAGAGCTCTCTGCACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: WVPAGSSSSWYL*VNGMKRALCTA Trigger: TGCAGTGCAGAGAGCTCTTTTCATCCCGTTGACTCAGAGATACCAAGAAGATGAAGAACCAGCTGGCACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS TCA 72 bp | TGTGCACAGCAGGGACCTGAACCTTATCAGCACTCCTaGGAATATCTGTCTGCATGTCTACTGGCCCATCAA | + |
|
Preference number: 6 (lower is better) Translates to: CAQQGPEPYQHS*EYLSACLLAHQ Trigger: TTGATGGGCCAGTAGACATGCAGACAGATATTCTCAGGAGTGCTGATAAGGTTCAGGTCCCTGCTGTGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS GCA 72 bp | TTGACTCAGAACTGTACATACGCTGTGGACAGTGACTaGTTTCCTCAAACTGTGGTCCTGGTGGTGAGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: LTQNCTYAVDSD*FPQTVVLVVRY Trigger: GTACCTCACCACCAGGACCACAGTTTGAGGAAAGCAGTCACTGTCCACAGCGTATGTACAGTTCTGAGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS GCA 72 bp | TCCCACACAAGTCTAAGGTCCACTGGGACAGACTCATaGGGCTTTTTAATATCTTGCCTTGGGACAGTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: SHTSLRSTGTDS*GFLISCLGTVR Trigger: TCGGACTGTCCCAAGGCAAGATATTAAAAAGCCGCATGAGTCTGTCCCAGTGGACCTTAGACTTGTGTGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS GCA 72 bp | CATGTCTACTGGCCCATCAACAGGGACTTCCAAGTTTaGAGTAGTGTTCTGTGGTACGATCACTTCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: HVYWPINRDFQV*SSVLWYDHFSR Trigger: CCTGGAGAAGTGATCGTACCACAGAACACTACTGCAAACTTGGAAGTCCCTGTTGATGGGCCAGTAGACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS CAA 72 bp | CTAAGGGCAGGGCACTCCTTGATGAGTGTGAATCCTTaGCAGTCACTTGATGAGACTCTGTATTGGGCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LRAGHSLMSVNP*QSLDETLYWAV Trigger: GACTGCCCAATACAGAGTCTCATCAAGTGACTGCAAAGGATTCACACTCATCAAGGAGTGCCCTGCCCTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS CAA 90 bp | ACTGTGACAAAGCAGGGTTCCATCTGGCTAAGGGCAGGGCACTCCTaGATGAGTGTGAATCCTTTGCAGTCACTTGATGAGACTCTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: TVTKQGSIWLRAGHS*MSVNPLQSLDETLY Trigger: ATACAGAGTCTCATCAAGTGACTGCAAAGGATTCACACTCATCAAGGAGTGCCCTGCCCTTAGCCAGATGGAACCCTGCTTTGTCACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS TCA 72 bp | ACAGTGACTGCTTTCCTCAAACTGTGGTCCTGGTGGTaGGGTACTGTTGTAAAATGCTGGTGGTTTCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: TVTAFLKLWSWW*GTVVKCWWFLP Trigger: GGGAAGAAACCACCAGCATTTTACAACAGTACCTCACCACCAGGACCACAGTTTGAGGAAAGCAGTCACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS TCA 72 bp | AGCATGCTGTGGGTAGTAATCATCATAAAATTCAGCTaGGCCTTGCATGGACTCAGAGTCGGCACTGCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SMLWVVIIIKFS*ALHGLRVGTAL Trigger: CAACGCAGTGCCGACTCTGAGTCCATGCAAGGCTCAGCTGAATTTTATGATGATTACTACCCACAGCATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS GCA 72 bp | CCTAGTTTACCTCCTGAACTGTGTAAGTCTCCAGACTaGTCTAAGCAGCCCTCTCTGTGTGTTAGACTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PSLPPELCKSPD*SKQPSLCVRLS Trigger: ACTGAGTCTAACACACAGAGAGGGCTGCTTAGAGCAGTCTGGAGACTTACACAGTTCAGGAGGTAAACTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS CAA 72 bp | TCTATGAGGCTGGGTGCCAGCTGGTTCTTCATCTTCTaGGTATCTCTGAGTCAACGGGATGAAAAGAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SMRLGASWFFIF*VSLSQRDEKSS Trigger: AGAGCTCTTTTCATCCCGTTGACTCAGAGATACCAAGAAGATGAAGAACCAGCTGGCACCCAGCCTCATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS CAA 90 bp | AAGTCTAAGGTCCACTGGGACAGACTCATGCGGCTTTTTAATATCTaGCCTTGGGACAGTCCGAAGTCTTGGGTCAACCACTTGATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: KSKVHWDRLMRLFNI*PWDSPKSWVNHLIS Trigger: AGAAATCAAGTGGTTGACCCAAGACTTCGGACTGTCCCAAGGCAAGATATTAAAAAGCCGCATGAGTCTGTCCCAGTGGACCTTAGACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS CAA 90 bp | GGTGATGCAGTTGGATCAAACGTCTTAAAAACCTCTTTCAGAGGTTaGTCATCTGTTTCTTCATCTGGGGTTGGGCTTGCCTGTCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GDAVGSNVLKTSFRG*SSVSSSGVGLACPG Trigger: ACCAGGACAGGCAAGCCCAACCCCAGATGAAGAAACAGATGACAAACCTCTGAAAGAGGTTTTTAAGACGTTTGATCCAACTGCATCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS TCA 72 bp | ACATCCTTGAGGAACTTTAGATCCTGGACCTGGACTTaGCTCAGAACTGTACATACGCTGTGGACAGTGACT | + |
|
Preference number: 6 (lower is better) Translates to: TSLRNFRSWTWT*LRTVHTLWTVT Trigger: AGTCACTGTCCACAGCGTATGTACAGTTCTGAGTCAAGTCCAGGTCCAGGATCTAAAGTTCCTCAAGGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS TCA 72 bp | TTAGCTGTATCATCTTCTTCCTTGCTTGATGCTCTATaGGGCTGGGTGCCAGCTGGTTCTTCATCTTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LAVSSSSLLDAL*GWVPAGSSSSW Trigger: CCAAGAAGATGAAGAACCAGCTGGCACCCAGCCTCATAGAGCATCAAGCAAGGAAGAAGATGATACAGCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS CCA 72 bp | CAGCTTGACTATGAGGGCCTACAATTTCAGATGAACTaGGTAGCAAAGATGGGTTCTCTTGCATTGGTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: QLDYEGLQFQMN*VAKMGSLALVD Trigger: GTCCACCAATGCAAGAGAACCCATCTTTGCTACCCAGTTCATCTGAAATTGTAGGCCCTCATAGTCAAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS CCA 72 bp | ATCAGCACTCCTGAGAATATCTGTCTGCATGTCTACTaGCCCATCAACAGGGACTTCCAAGTTTGCAGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: ISTPENICLHVY*PINRDFQVCSS Trigger: ACTACTGCAAACTTGGAAGTCCCTGTTGATGGGCCAGTAGACATGCAGACAGATATTCTCAGGAGTGCTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS CCA 72 bp | ATCAACAGGGACTTCCAAGTTTGCAGTAGTGTTCTGTaGTACGATCACTTCTCCAGGAGAAGGCTGGTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: INRDFQVCSSVL*YDHFSRRRLVF Trigger: AAAAACCAGCCTTCTCCTGGAGAAGTGATCGTACCACAGAACACTACTGCAAACTTGGAAGTCCCTGTTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS GCA 72 bp | ATTGTCTTAACTGTGACCTTGGATCCTGGAGGACTATaGCAGGTGAAGAATCCAAAGGTATTAAGAAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: IVLTVTLDPGGL*QVKNPKVLRRP Trigger: AGGCCTTCTTAATACCTTTGGATTCTTCACCTGGCATAGTCCTCCAGGATCCAAGGTCACAGTTAAGACAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS CCA 72 bp | AGGACTCCTGGGACTGTCGATAGTATTTCAGCTGACTaGAGAAATCTTCTTCTCCTTCCTGGTTACTATAGT | + |
|
Preference number: 6 (lower is better) Translates to: RTPGTVDSISAD*RNLLLLPGYYS Trigger: ACTATAGTAACCAGGAAGGAGAAGAAGATTTCTCCAGTCAGCTGAAATACTATCGACAGTCCCAGGAGTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS CCA 72 bp | CTCTTCATGCCACATCTCATCAGCAGAGTTATCAGGTaGTTGAAAATTATGTGCAGCATGCTGTGGGTAGTA | + |
|
Preference number: 6 (lower is better) Translates to: LFMPHLISRVIR*LKIMCSMLWVV Trigger: TACTACCCACAGCATGCTGCACATAATTTTCAACCACCTGATAACTCTGCTGATGAGATGTGGCATGAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS CAA 90 bp | AATCTATTGAGCCTCTGGTCAGCTATAAGTGGGGGCAGAGGTAAGTaGATTGAAGATACTGGATCAGGTTTAGGTAAAGGTACTGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: NLLSLWSAISGGRGK*IEDTGSGLGKGTGS Trigger: ACTTCCAGTACCTTTACCTAAACCTGATCCAGTATCTTCAATCAACTTACCTCTGCCCCCACTTATAGCTGACCAGAGGCTCAATAGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
||
| CDS TCA 72 bp | TCTTTTCTTACGGGAACTTTGCATACGTTCAACATCTaGGTCCAGGCTGTAGTCAGAACTATCATCACCAGA | + |
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Preference number: 6 (lower is better) Translates to: SFLTGTLHTFNI*VQAVVRTIITR Trigger: TCTGGTGATGATAGTTCTGACTACAGCCTGGACTCAGATGTTGAACGTATGCAAAGTTCCCGTAAGAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110319.3 ENSMUST00000110320.9 |
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| CDS CAA 72 bp | TTCATGCCACATCTCATCAGCAGAGTTATCAGGTGGTaGAAAATTATGTGCAGCATGCTGTGGGTAGTAATC | + |
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Preference number: 6 (lower is better) Translates to: FMPHLISRVIRW*KIMCSMLWVVI Trigger: GATTACTACCCACAGCATGCTGCACATAATTTTCAACCACCTGATAACTCTGCTGATGAGATGTGGCATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS CAA 72 bp | GTTCCTGTTTGTTTCTGTAATGTCCTCAGTATTGACTaGACACCACTTCCTTCTTCCTCTTCACTACTGGAA | + |
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Preference number: 6 (lower is better) Translates to: VPVCFCNVLSID*TPLPSSSSLLE Trigger: TTCCAGTAGTGAAGAGGAAGAAGGAAGTGGTGTCAAGTCAATACTGAGGACATTACAGAAACAAACAGGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS CAA 90 bp | TGCAAACTCTTCATGCCACATCTCATCAGCAGAGTTATCAGGTGGTaGAAAATTATGTGCAGCATGCTGTGGGTAGTAATCATCATAAAA | + |
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Preference number: 6 (lower is better) Translates to: CKLFMPHLISRVIRW*KIMCSMLWVVIIIK Trigger: TTTTATGATGATTACTACCCACAGCATGCTGCACATAATTTTCAACCACCTGATAACTCTGCTGATGAGATGTGGCATGAAGAGTTTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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| CDS CAA 90 bp | TTTCTCAGTGTTCCTGTTTGTTTCTGTAATGTCCTCAGTATTGACTaGACACCACTTCCTTCTTCCTCTTCACTACTGGAATACCAGTTA | + |
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Preference number: 6 (lower is better) Translates to: FLSVPVCFCNVLSID*TPLPSSSSLLEYQL Trigger: TAACTGGTATTCCAGTAGTGAAGAGGAAGAAGGAAGTGGTGTCAAGTCAATACTGAGGACATTACAGAAACAAACAGGAACACTGAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110320.9 |
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