Pregenerated sensors for ZC3H15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027091Ensembl transcript IDs: ENSMUST00000081591.7
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTAGTCAAGGTCAGAAGAGAGGACGCAGGGCTAGTACTCCTTTTGTaGAGGACAGAATCCCTCCAGGGTCATCATGGGGAAAGAAACATC | + |
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Preference number: 1 (lower is better) Translates to: VVKVRREDAGLVLLL*RTESLQGHHGERNI Trigger: GATGTTTCTTTCCCCATGATGACCCTGGAGGGATTCTGTCCTCCACAAAAGGAGTACTAGCCCTGCGTCCTCTCTTCTGACCTTGACTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| 3UTR TCA 90 bp | GTAATGACCATTTTTAATTTATCACCAACTACTCTGAACTTACTATaGGATGTAGTCAAGGTCAGAAGAGAGGACGCAGGGCTAGTACTC | + |
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Preference number: 1 (lower is better) Translates to: VMTIFNLSPTTLNLL*DVVKVRREDAGLVL Trigger: GAGTACTAGCCCTGCGTCCTCTCTTCTGACCTTGACTACATCTCATAGTAAGTTCAGAGTAGTTGGTGATAAATTAAAAATGGTCATTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| 3UTR CAA 90 bp | GATGTAGTCAAGGTCAGAAGAGAGGACGCAGGGCTAGTACTCCTTTaGTGGAGGACAGAATCCCTCCAGGGTCATCATGGGGAAAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: DVVKVRREDAGLVLL*WRTESLQGHHGERN Trigger: GTTTCTTTCCCCATGATGACCCTGGAGGGATTCTGTCCTCCACAAAAGGAGTACTAGCCCTGCGTCCTCTCTTCTGACCTTGACTACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| 3UTR-3UTR TCA 90 bp | CACGGCACTGTAGCTGACCCTGTCAGGTTGACAAGTCCCATTCTCAGTGTCCACATTACACATGCCCAATaGAAACCAAAAGCTGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: HGTVADPVRLTSPILSVHITHAQ*KPKAGK Trigger: TTTCCCAGCTTTTGGTTTTCATTGGGCATGTGTAAT...GTGGACACTGAGAATGGGACTTGTCAACCTGACAGGGTCAGCTACAGTGCCGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| 3UTR-3UTR CCA 90 bp | TCTGCATATGCAGTTTCCTTTATCAAGTACAGTGCTCACCTTTCAGGCAGTCTCCACTTCCTACATGAGTaGACAGTTACAACGACAATC | + |
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Preference number: 2 (lower is better) Translates to: SAYAVSFIKYSAHLSGSLHFLHE*TVTTTI Trigger: GATTGTCGTTGTAACTGTCCACTCATGTAGGAAGTG...GAGACTGCCTGAAAGGTGAGCACTGTACTTGATAAAGGAAACTGCATATGCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| 3UTR-3UTR CCA 90 bp | TTCCTTTATCAAGTACAGTGCTCACCTTTCAGGCAGTCTCTAAAACATATAAATCTAGTACTCCTTTTGTaGAGGACAGAATCCCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: FLYQVQCSPFRQSLKHINLVLLL*RTESLQ Trigger: CTGGAGGGATTCTGTCCTCCACAAAAGGAGTACTAG...ATTTATATGTTTTAGAGACTGCCTGAAAGGTGAGCACTGTACTTGATAAAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| 3UTR CCA 72 bp | GTCAGAAGAGAGGACGCAGGGCTAGTACTCCTTTTGTaGAGGACAGAATCCCTCCAGGGTCATCATGGGGAA | + |
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Preference number: 3 (lower is better) Translates to: VRREDAGLVLLL*RTESLQGHHGE Trigger: TTCCCCATGATGACCCTGGAGGGATTCTGTCCTCCACAAAAGGAGTACTAGCCCTGCGTCCTCTCTTCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| 3UTR CCA 72 bp | CCTTTTGTGGAGGACAGAATCCCTCCAGGGTCATCATaGGGAAAGAAACATCCTGCTGATTCTAGGTGGCCA | + |
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Preference number: 3 (lower is better) Translates to: PFVEDRIPPGSS*GKKHPADSRWP Trigger: TGGCCACCTAGAATCAGCAGGATGTTTCTTTCCCCATGATGACCCTGGAGGGATTCTGTCCTCCACAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| 3UTR TCA 72 bp | GGAGAACTTCAAACAGCTTTAACACGGCACTGTAGCTaGCCCTGTCAGGTTGACAAGTCCCATTCTCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: GELQTALTRHCS*PCQVDKSHSQC Trigger: ACACTGAGAATGGGACTTGTCAACCTGACAGGGTCAGCTACAGTGCCGTGTTAAAGCTGTTTGAAGTTCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| 3UTR CCA 72 bp | CAAAAGCTGGGAAAGCGGTTACACTTCCTACATGAGTaGACAGTTACAACGACAATCATCTTCTGTAATGAC | + |
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Preference number: 3 (lower is better) Translates to: QKLGKRLHFLHE*TVTTTIIFCND Trigger: GTCATTACAGAAGATGATTGTCGTTGTAACTGTCCACTCATGTAGGAAGTGTAACCGCTTTCCCAGCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| 3UTR TCA 72 bp | ATTTTTAATTTATCACCAACTACTCTGAACTTACTATaGGATGTAGTCAAGGTCAGAAGAGAGGACGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: IFNLSPTTLNLL*DVVKVRREDAG Trigger: CCCTGCGTCCTCTCTTCTGACCTTGACTACATCTCATAGTAAGTTCAGAGTAGTTGGTGATAAATTAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR CCA 90 bp | ATCCCTCCAGGGTCATCATGGGGAAAGAAACATCCTGCTGATTCTAGGTGGCCACCAGGAGGAAGTGCATaGCGATACATGCAGTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: IPPGSSWGKKHPADSRWPPGGSA*RYMQLS Trigger: GGACAACTGCATGTATCGCCATGCACTTCCTCCTGG...TGGCCACCTAGAATCAGCAGGATGTTTCTTTCCCCATGATGACCCTGGAGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR GCA 90 bp | CAGTTTCCTTTATCAAGTACAGTGCTCACCTTTCAGGCAGTCTCTAAAACATATTCTGCTCCGCCTTCTTaGTGCCCCCGGCCTGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: QFPLSSTVLTFQAVSKTYSAPPS*CPRPEP Trigger: AGGCTCAGGCCGGGGGCAGCAAGAAGGCGGAGCAGA...ATATGTTTTAGAGACTGCCTGAAAGGTGAGCACTGTACTTGATAAAGGAAACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR CCA 90 bp | ATCCCTCCAGGGTCATCATGGGGAAAGAAACATCCTGCTGATTCTAGGTGGCCACAGGAACAGCATCGATaGATCCATTTTCCTGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: IPPGSSWGKKHPADSRWPQEQHR*IHFPVL Trigger: GAGGACAGGAAAATGGATCCATCGATGCTGTTCCTG...TGGCCACCTAGAATCAGCAGGATGTTTCTTTCCCCATGATGACCCTGGAGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR TCA 90 bp | TCTGCATATGCAGTTTCCTTTATCAAGTACAGTGCTCACCTTTCAGGCAGTCTCTACACTGTCCCTGTTTaGAGAATGCGCACACCACAG | + |
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Preference number: 4 (lower is better) Translates to: SAYAVSFIKYSAHLSGSLYTVPV*RMRTPQ Trigger: CTGTGGTGTGCGCATTCTTCAAACAGGGACAGTGTA...GAGACTGCCTGAAAGGTGAGCACTGTACTTGATAAAGGAAACTGCATATGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR TCA 90 bp | GACAAGTCCCATTCTCAGTGTCCACCTAATTGTCCACAGAAGTACAATACTGAAGTGCTTTCCCTGCTTTaGAGTCAGCTTTCCGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: DKSHSQCPPNCPQKYNTEVLSLL*SQLSAS Trigger: AGAGGCGGAAAGCTGACTTCAAAGCAGGGAAAGCAC...TTCAGTATTGTACTTCTGTGGACAATTAGGTGGACACTGAGAATGGGACTTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR TCA 90 bp | CTAGGTGGCCAAACAATTAATGAGTCAATCTCAGTTCATGTTGATCCTAGTGAGCCTCGTCATCATCATTaGCCAGCTCGGGACGAAATT | + |
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Preference number: 4 (lower is better) Translates to: LGGQTINESISVHVDPSEPRHHH*PARDEI Trigger: AATTTCGTCCCGAGCTGGTCAATGATGATGACGAGG...CTCACTAGGATCAACATGAACTGAGATTGACTCATTAATTGTTTGGCCACCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR GCA 90 bp | GTTGACAAGTCCCATTCTCAGTGTCCACCTAATTGTCCACAGAAGTACAATACTTCCCTGTTTGAAGAATaGGCACACCACAGATTTGGG | + |
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Preference number: 4 (lower is better) Translates to: VDKSHSQCPPNCPQKYNTSLFEE*AHHRFG Trigger: CCCAAATCTGTGGTGTGCGCATTCTTCAAACAGGGA...AGTATTGTACTTCTGTGGACAATTAGGTGGACACTGAGAATGGGACTTGTCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR GCA 90 bp | ACAAGTCCCATTCTCAGTGTCCACCTAATTGTCCACAGAAGTACAATACTGAATCACCAGTGCTTTCCCTaGTTTGAAGTCAGCTTTCCG | + |
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Preference number: 4 (lower is better) Translates to: TSPILSVHLIVHRSTILNHQCFP*FEVSFP Trigger: CGGAAAGCTGACTTCAAAGCAGGGAAAGCACTGGTG...ATTCAGTATTGTACTTCTGTGGACAATTAGGTGGACACTGAGAATGGGACTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR TCA 90 bp | CCTGTCAGGTTGACAAGTCCCATTCTCAGTGTCCACCTAATTGTCCACAGAAGTTCCAAAGTGAGGTCATaGGAGAACTTACATTTATCT | + |
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Preference number: 4 (lower is better) Translates to: PVRLTSPILSVHLIVHRSSKVRS*ENLHLS Trigger: AGATAAATGTAAGTTCTCTCATGACCTCACTTTGGA...ACTTCTGTGGACAATTAGGTGGACACTGAGAATGGGACTTGTCAACCTGACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR GCA 90 bp | CAGTTTCCTTTATCAAGTACAGTGCTCACCTTTCAGGCAGTCTCTAAAACATATACCACTGATCACCAGTaGTTTCCCTGCTTTGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: QFPLSSTVLTFQAVSKTYTTDHQ*FPCFEV Trigger: GACTTCAAAGCAGGGAAAGCACTGGTGATCAGTGGT...ATATGTTTTAGAGACTGCCTGAAAGGTGAGCACTGTACTTGATAAAGGAAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR GCA 90 bp | TACACTTCCTACATGAGTGGACAGTTACAACGACAATCATCTTCTGTAATGACCGTAACGGGTATCGTCTaGTTCCTCGTCATCATCATT | + |
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Preference number: 4 (lower is better) Translates to: YTSYMSGQLQRQSSSVMTVTGIV*FLVIII Trigger: AATGATGATGACGAGGAAGCAGACGATACCCGTTAC...GGTCATTACAGAAGATGATTGTCGTTGTAACTGTCCACTCATGTAGGAAGTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR TCA 90 bp | TGTCTTAAGTGTGAATCTGTTGTTTCTGGAAATTACACATGCCCAATGAAAACCCCAGATCTTCGCCAGTaGACAGGTTTTCATCAACAG | + |
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Preference number: 4 (lower is better) Translates to: CLKCESVVSGNYTCPMKTPDLRQ*TGFHQQ Trigger: CTGTTGATGAAAACCTGTTCACTGGCGAAGATCTGG...GGTTTTCATTGGGCATGTGTAATTTCCAGAAACAACAGATTCACACTTAAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR CCA 90 bp | CTAGGTGGCCAAACAATTAATGAGTCAATCTCAGTTCATGTTGATCCTAGTGAGTTGCGCTACCTGACGTaGATTCTGTTGACCAAATTT | + |
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Preference number: 4 (lower is better) Translates to: LGGQTINESISVHVDPSELRYLT*ILLTKF Trigger: AAATTTGGTCAACAGAATCCACGTCAGGTAGCGCAA...CTCACTAGGATCAACATGAACTGAGATTGACTCATTAATTGTTTGGCCACCTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR CCA 90 bp | CTAGGTGGCCAAACAATTAATGAGTCAATCTCAGTTCATGTTGATCCTAGTGAGCTCTTCTACATCTCTTaGGACGTACAGGCTTATATC | + |
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Preference number: 4 (lower is better) Translates to: LGGQTINESISVHVDPSELFYIS*DVQAYI Trigger: GATATAAGCCTGTACGTCCCAAGAGATGTAGAAGAG...CTCACTAGGATCAACATGAACTGAGATTGACTCATTAATTGTTTGGCCACCTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR TCA 90 bp | ACAAGTCCCATTCTCAGTGTCCACCTAATTGTCCACAGAAGTACAATACTGAATAAGTTTTGTCCTCGATaGTCTTCTCCTTCTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: TSPILSVHLIVHRSTILNKFCPR*SSPSSS Trigger: AGAAGAAGAAGGAGAAGATCATCGAGGACAAAACTT...ATTCAGTATTGTACTTCTGTGGACAATTAGGTGGACACTGAGAATGGGACTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR TCA 90 bp | TTCCTTTATCAAGTACAGTGCTCACCTTTCAGGCAGTCTCTAAAACATATAAATCAACACTGGCCACAGTaGTACCTGTCTCTTCTACAT | + |
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Preference number: 4 (lower is better) Translates to: FLYQVQCSPFRQSLKHINQHWPQ*YLSLLH Trigger: ATGTAGAAGAGACAGGTATCACTGTGGCCAGTGTTG...ATTTATATGTTTTAGAGACTGCCTGAAAGGTGAGCACTGTACTTGATAAAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR TCA 90 bp | TGTCTTAAGTGTGAATCTGTTGTTTCTGGAAATTACACATGCCCAATGAAAACCATTTTCTCTCCAAAGTaGGGTCATGAGAGAACTTAC | + |
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Preference number: 4 (lower is better) Translates to: CLKCESVVSGNYTCPMKTIFSPK*GHERTY Trigger: GTAAGTTCTCTCATGACCTCACTTTGGAGAGAAAAT...GGTTTTCATTGGGCATGTGTAATTTCCAGAAACAACAGATTCACACTTAAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR GCA 90 bp | AAAACTGCATCAAACGCAAGTGTCTTAAGTGTGAATCTGTTGTTTCTGGAAATTTTTTCCGCCTCACCGTaGTTCTTGTTTACTACTTCT | + |
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Preference number: 4 (lower is better) Translates to: KTASNASVLSVNLLFLEIFSASP*FLFTTS Trigger: AGAAGTAGTAAACAAGAAGCACGGTGAGGCGGAAAA...AATTTCCAGAAACAACAGATTCACACTTAAGACACTTGCGTTTGATGCAGTTTT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR CAA 90 bp | ATCCCTCCAGGGTCATCATGGGGAAAGAAACATCCTGCTGATTCTAGGTGGCCAGTACACTGTCCCTGTTaGAAGAATGCGCACACCACA | + |
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Preference number: 5 (lower is better) Translates to: IPPGSSWGKKHPADSRWPVHCPC*KNAHTT Trigger: TGTGGTGTGCGCATTCTTCAAACAGGGACAGTGTAC...TGGCCACCTAGAATCAGCAGGATGTTTCTTTCCCCATGATGACCCTGGAGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS GCA 90 bp | TGTCTTTCTTTAGCACAAATCCAGGAGGAAGTGCATGGCGATACATaGAGTTGTCCCCACCTCCAGGACACACCCAAAACCAGCCATACT | + |
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Preference number: 5 (lower is better) Translates to: CLSLAQIQEEVHGDT*SCPHLQDTPKTSHT Trigger: AGTATGGCTGGTTTTGGGTGTGTCCTGGAGGTGGGGACAACTGCATGTATCGCCATGCACTTCCTCCTGGATTTGTGCTAAAGAAAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS GCA 90 bp | ATCAACCTCATCACCACCTGTTCCCTGAATGTAACGGGTATCGTCTaGTTCCTCGTCATCATCATTGACCAGCTCGGGACGAAATTCAAA | + |
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Preference number: 5 (lower is better) Translates to: INLITTCSLNVTGIV*FLVIIIDQLGTKFK Trigger: TTTGAATTTCGTCCCGAGCTGGTCAATGATGATGACGAGGAAGCAGACGATACCCGTTACATTCAGGGAACAGGTGGTGATGAGGTTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR CAA 90 bp | ATCCCTCCAGGGTCATCATGGGGAAAGAAACATCCTGCTGATTCTAGGTGGCCAGACTCTAGAGTGATTTaGGTAACATTTGGACCTAGG | + |
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Preference number: 5 (lower is better) Translates to: IPPGSSWGKKHPADSRWPDSRVI*VTFGPR Trigger: CCTAGGTCCAAATGTTACCAAAATCACTCTAGAGTC...TGGCCACCTAGAATCAGCAGGATGTTTCTTTCCCCATGATGACCCTGGAGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR CAA 90 bp | CCTGTCAGGTTGACAAGTCCCATTCTCAGTGTCCACCTAATTGTCCACAGAAGTTTCAGTCCAAAAGTTTaGTCCTCGATGATCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: PVRLTSPILSVHLIVHRSFSPKV*SSMIFS Trigger: GGAGAAGATCATCGAGGACAAAACTTTTGGACTGAA...ACTTCTGTGGACAATTAGGTGGACACTGAGAATGGGACTTGTCAACCTGACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR CAA 90 bp | TGTAGTCAAGGTCAGAAGAGAGGACGCAGGGCTAGTACTCCTTTTGTGGAGGACTTGACCAAATTTCACTaGATGAGTGACAGCCTTAAT | + |
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Preference number: 5 (lower is better) Translates to: CSQGQKRGRRASTPFVEDLTKFH*MSDSLN Trigger: ATTAAGGCTGTCACTCATCAAGTGAAATTTGGTCAA...GTCCTCCACAAAAGGAGTACTAGCCCTGCGTCCTCTCTTCTGACCTTGACTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR CAA 90 bp | CACTTCCTACATGAGTGGACAGTTACAACGACAATCATCTTCTGTAATGACCATAGTGCTTTCCCTGCTTaGAAGTCAGCTTTCCGCCTC | + |
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Preference number: 5 (lower is better) Translates to: HFLHEWTVTTTIIFCNDHSAFPA*KSAFRL Trigger: GAGGCGGAAAGCTGACTTCAAAGCAGGGAAAGCACT...ATGGTCATTACAGAAGATGATTGTCGTTGTAACTGTCCACTCATGTAGGAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR CAA 90 bp | ACATGCCCAATGAAAACCAAAAGCTGGGAAAGCGGTTACACTTCCTACATGAGTCTGACGTGGATTCTGTaGACCAAATTTCACTTGATG | + |
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Preference number: 5 (lower is better) Translates to: TCPMKTKSWESGYTSYMSLTWIL*TKFHLM Trigger: CATCAAGTGAAATTTGGTCAACAGAATCCACGTCAG...ACTCATGTAGGAAGTGTAACCGCTTTCCCAGCTTTTGGTTTTCATTGGGCATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR CAA 90 bp | CAGTTTCCTTTATCAAGTACAGTGCTCACCTTTCAGGCAGTCTCTAAAACATATTCCTCGTCATCATCATaGACCAGCTCGGGACGAAAT | + |
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Preference number: 5 (lower is better) Translates to: QFPLSSTVLTFQAVSKTYSSSSS*TSSGRN Trigger: ATTTCGTCCCGAGCTGGTCAATGATGATGACGAGGA...ATATGTTTTAGAGACTGCCTGAAAGGTGAGCACTGTACTTGATAAAGGAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR CAA 90 bp | ACATGCCCAATGAAAACCAAAAGCTGGGAAAGCGGTTACACTTCCTACATGAGTTCTCTTCTACATCTCTaGGGACGTACAGGCTTATAT | + |
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Preference number: 5 (lower is better) Translates to: TCPMKTKSWESGYTSYMSSLLHL*GRTGLY Trigger: ATATAAGCCTGTACGTCCCAAGAGATGTAGAAGAGA...ACTCATGTAGGAAGTGTAACCGCTTTCCCAGCTTTTGGTTTTCATTGGGCATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS TCA 90 bp | CAAGAGTGTTCAATTCCTCTTCTAGTTCATCCAGATCTTCGCCAGTaGACAGGTTTTCATCAACAGGAACAGCATCGATGGATCCATTTT | + |
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Preference number: 5 (lower is better) Translates to: QECSIPLLVHPDLRQ*TGFHQQEQHRWIHF Trigger: AAAATGGATCCATCGATGCTGTTCCTGTTGATGAAAACCTGTTCACTGGCGAAGATCTGGATGAACTAGAAGAGGAATTGAACACTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS CCA 90 bp | TCTTTCAACACTGGCCACAGTGATACCTGTCTCTTCTACATCTCTTaGGACGTACAGGCTTATATCTATGTCATTTACACCCATAGAATC | + |
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Preference number: 5 (lower is better) Translates to: SFNTGHSDTCLFYIS*DVQAYIYVIYTHRI Trigger: GATTCTATGGGTGTAAATGACATAGATATAAGCCTGTACGTCCCAAGAGATGTAGAAGAGACAGGTATCACTGTGGCCAGTGTTGAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR CAA 90 bp | CAGTTTCCTTTATCAAGTACAGTGCTCACCTTTCAGGCAGTCTCTAAAACATATGCAGCAACTACAGGTTaGAACAACTCATTTAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: QFPLSSTVLTFQAVSKTYAATTG*NNSFSS Trigger: AGAGCTAAATGAGTTGTTCAAACCTGTAGTTGCTGC...ATATGTTTTAGAGACTGCCTGAAAGGTGAGCACTGTACTTGATAAAGGAAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS-3UTR CAA 90 bp | CTAGGTGGCCAAACAATTAATGAGTCAATCTCAGTTCATGTTGATCCTAGTGAGACCTTTGCTTATTTTTaGTGCAGCAACTACAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: LGGQTINESISVHVDPSETFAYF*CSNYRF Trigger: AAACCTGTAGTTGCTGCACAAAAAATAAGCAAAGGT...CTCACTAGGATCAACATGAACTGAGATTGACTCATTAATTGTTTGGCCACCTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS GCA 72 bp | TTAGCACAAATCCAGGAGGAAGTGCATGGCGATACATaGAGTTGTCCCCACCTCCAGGACACACCCAAAACC | + |
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Preference number: 6 (lower is better) Translates to: LAQIQEEVHGDT*SCPHLQDTPKT Trigger: GGTTTTGGGTGTGTCCTGGAGGTGGGGACAACTGCATGTATCGCCATGCACTTCCTCCTGGATTTGTGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS GCA 72 bp | ATCACCACCTGTTCCCTGAATGTAACGGGTATCGTCTaGTTCCTCGTCATCATCATTGACCAGCTCGGGACG | + |
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Preference number: 6 (lower is better) Translates to: ITTCSLNVTGIV*FLVIIIDQLGT Trigger: CGTCCCGAGCTGGTCAATGATGATGACGAGGAAGCAGACGATACCCGTTACATTCAGGGAACAGGTGGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS CCA 72 bp | TTGTCTTTCTTTAGCACAAATCCAGGAGGAAGTGCATaGCGATACATGCAGTTGTCCCCACCTCCAGGACAC | + |
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Preference number: 6 (lower is better) Translates to: LSFFSTNPGGSA*RYMQLSPPPGH Trigger: GTGTCCTGGAGGTGGGGACAACTGCATGTATCGCCATGCACTTCCTCCTGGATTTGTGCTAAAGAAAGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS CAA 90 bp | TTCTTTAGCACAAATCCAGGAGGAAGTGCATGGCGATACATGCAGTaGTCCCCACCTCCAGGACACACCCAAAACCAGCCATACTTGTTA | + |
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Preference number: 6 (lower is better) Translates to: FFSTNPGGSAWRYMQ*SPPPGHTQNQPYLL Trigger: TAACAAGTATGGCTGGTTTTGGGTGTGTCCTGGAGGTGGGGACAACTGCATGTATCGCCATGCACTTCCTCCTGGATTTGTGCTAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS TCA 72 bp | TGTAACGGGTATCGTCTGCTTCCTCGTCATCATCATTaGCCAGCTCGGGACGAAATTCAAATACCTCACGAC | + |
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Preference number: 6 (lower is better) Translates to: CNGYRLLPRHHH*PARDEIQIPHD Trigger: GTCGTGAGGTATTTGAATTTCGTCCCGAGCTGGTCAATGATGATGACGAGGAAGCAGACGATACCCGTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS CAA 72 bp | CTCTTCTTCCACGCGAGAAAAGACTCTAGAGTGATTTaGGTAACATTTGGACCTAGGGCAGAACGCTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LFFHARKDSRVI*VTFGPRAERSL Trigger: AAGAGAGCGTTCTGCCCTAGGTCCAAATGTTACCAAAATCACTCTAGAGTCTTTTCTCGCGTGGAAGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS TCA 72 bp | TCAATTCCTCTTCTAGTTCATCCAGATCTTCGCCAGTaGACAGGTTTTCATCAACAGGAACAGCATCGATGG | + |
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Preference number: 6 (lower is better) Translates to: SIPLLVHPDLRQ*TGFHQQEQHRW Trigger: CCATCGATGCTGTTCCTGTTGATGAAAACCTGTTCACTGGCGAAGATCTGGATGAACTAGAAGAGGAATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS CCA 72 bp | ACTGGCCACAGTGATACCTGTCTCTTCTACATCTCTTaGGACGTACAGGCTTATATCTATGTCATTTACACC | + |
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Preference number: 6 (lower is better) Translates to: TGHSDTCLFYIS*DVQAYIYVIYT Trigger: GGTGTAAATGACATAGATATAAGCCTGTACGTCCCAAGAGATGTAGAAGAGACAGGTATCACTGTGGCCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS CAA 72 bp | TTCAGCTTCACTTTGCGCTACCTGACGTGGATTCTGTaGACCAAATTTCACTTGATGAGTGACAGCCTTAAT | + |
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Preference number: 6 (lower is better) Translates to: FSFTLRYLTWIL*TKFHLMSDSLN Trigger: ATTAAGGCTGTCACTCATCAAGTGAAATTTGGTCAACAGAATCCACGTCAGGTAGCGCAAAGTGAAGCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS CAA 90 bp | TGTCTTTTCCTCTTCTTCCACGCGAGAAAAGACTCTAGAGTGATTTaGGTAACATTTGGACCTAGGGCAGAACGCTCTCTTTCAATTAGA | + |
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Preference number: 6 (lower is better) Translates to: CLFLFFHARKDSRVI*VTFGPRAERSLSIR Trigger: TCTAATTGAAAGAGAGCGTTCTGCCCTAGGTCCAAATGTTACCAAAATCACTCTAGAGTCTTTTCTCGCGTGGAAGAAGAGGAAAAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS CAA 90 bp | TTCACTTTGCGCTACCTGACGTGGATTCTGTTGACCAAATTTCACTaGATGAGTGACAGCCTTAATAAATTTCTGTTGCTTTGCTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: FTLRYLTWILLTKFH*MSDSLNKFLLLCSF Trigger: AAAGGAGCAAAGCAACAGAAATTTATTAAGGCTGTCACTCATCAAGTGAAATTTGGTCAACAGAATCCACGTCAGGTAGCGCAAAGTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS CAA 90 bp | ATTAGATCTTCTAATGAGATTTCATCTTCCTTCTCTTCTTTCTTTTaGTCTTTCTTTAGCACAAATCCAGGAGGAAGTGCATGGCGATAC | + |
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Preference number: 6 (lower is better) Translates to: IRSSNEISSSFSSFF*SFFSTNPGGSAWRY Trigger: GTATCGCCATGCACTTCCTCCTGGATTTGTGCTAAAGAAAGACAAAAAGAAAGAAGAGAAGGAAGATGAAATCTCATTAGAAGATCTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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| CDS CAA 72 bp | TCTAATGAGATTTCATCTTCCTTCTCTTCTTTCTTTTaGTCTTTCTTTAGCACAAATCCAGGAGGAAGTGCA | + |
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Preference number: 6 (lower is better) Translates to: SNEISSSFSSFF*SFFSTNPGGSA Trigger: TGCACTTCCTCCTGGATTTGTGCTAAAGAAAGACAAAAAGAAAGAAGAGAAGGAAGATGAAATCTCATTAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081591.7 |
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