Pregenerated sensors for ZC3H14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021012Ensembl transcript IDs: ENSMUST00000021399.9, ENSMUST00000057000.17, ENSMUST00000110104.10, ENSMUST00000110105.10, ENSMUST00000220660.2, ENSMUST00000221532.2, ENSMUST00000223083.2, ENSMUST00000223451.2
Found 266 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TCACTCACTGCTCTGAGGTCGAATCCATTTCAAGGCGTGTCTTGGTaGCACAGTAATGGTGGGGTGATAAAATGTGCAGTCAGGTCTCGT | + |
Preference number: 1 (lower is better) Translates to: SLTALRSNPFQGVSW*HSNGGVIKCAVRSR Trigger: ACGAGACCTGACTGCACATTTTATCACCCCACCATTACTGTGCCACCAAGACACGCCTTGAAATGGATTCGACCTCAGAGCAGTGAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220660.2 |
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3UTR CCA 90 bp | GCATCACTCACTGCTCTGAGGTCGAATCCATTTCAAGGCGTGTCTTaGTGGCACAGTAATGGTGGGGTGATAAAATGTGCAGTCAGGTCT | + |
Preference number: 1 (lower is better) Translates to: ASLTALRSNPFQGVS*WHSNGGVIKCAVRS Trigger: AGACCTGACTGCACATTTTATCACCCCACCATTACTGTGCCACCAAGACACGCCTTGAAATGGATTCGACCTCAGAGCAGTGAGTGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220660.2 |
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3UTR GCA 90 bp | ATTCCAAAGAACTGTCCATATATTTTTACATCGTCATTCCAACTATaGTTACCCTTTATGACCATGTCTCTGCTCACTTTCAGAAAGGCA | + |
Preference number: 1 (lower is better) Translates to: IPKNCPYIFTSSFQL*LPFMTMSLLTFRKA Trigger: TGCCTTTCTGAAAGTGAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAATATATGGACAGTTCTTTGGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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3UTR-3UTR TCA 90 bp | GCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATAAAGTGCTTCAGCTCTaGGGACACTGGCCTTCCCAC | + |
Preference number: 2 (lower is better) Translates to: ASVSKPGHCYHAGLQTLHKVLQL*GHWPSH Trigger: GTGGGAAGGCCAGTGTCCTCAGAGCTGAAGCACTTT...ATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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3UTR-3UTR CCA 90 bp | GCTCTGAGGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCATCTCTCATCAGAAGATaGAAGCTTTCAAACTGCATG | + |
Preference number: 2 (lower is better) Translates to: ALRTLAFPQHYSPKLQVPSLIRR*KLSNCM Trigger: CATGCAGTTTGAAAGCTTCCATCTTCTGATGAGAGA...TGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCCTCAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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3UTR-3UTR TCA 90 bp | CTCACTGCTCTGAGGTCGAATCCATTTCAAGGCGTGTCTTGGTGGCACAGTAATTCAGGTCTCGTACACTaGGTGTTAAACCTACAGTGC | + |
Preference number: 2 (lower is better) Translates to: LTALRSNPFQGVSWWHSNSGLVH*VLNLQC Trigger: GCACTGTAGGTTTAACACTCAGTGTACGAGACCTGA...ATTACTGTGCCACCAAGACACGCCTTGAAATGGATTCGACCTCAGAGCAGTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220660.2 |
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3UTR-3UTR CCA 90 bp | GCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATTCTCTCATCAGAAGATaGAAGCTTTCAAACTGCATG | + |
Preference number: 2 (lower is better) Translates to: ASVSKPGHCYHAGLQTLHSLIRR*KLSNCM Trigger: CATGCAGTTTGAAAGCTTCCATCTTCTGATGAGAGA...ATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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3UTR-3UTR CCA 90 bp | AAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACATCTCTCATCAGAAGATaGAAGCTTTCAAACTGCATG | + |
Preference number: 2 (lower is better) Translates to: KAASVSKPGHCYHAGLQTSLIRR*KLSNCM Trigger: CATGCAGTTTGAAAGCTTCCATCTTCTGATGAGAGA...TGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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3UTR-3UTR CCA 90 bp | AGGTCGAATCCATTTCAAGGCGTGTCTTGGTGGCACAGTAATGGTGGGGTGATATCTCTCATCAGAAGATaGAAGCTTTCAAACTGCATG | + |
Preference number: 2 (lower is better) Translates to: RSNPFQGVSWWHSNGGVISLIRR*KLSNCM Trigger: CATGCAGTTTGAAAGCTTCCATCTTCTGATGAGAGA...TATCACCCCACCATTACTGTGCCACCAAGACACGCCTTGAAATGGATTCGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220660.2 |
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3UTR-3UTR TCA 90 bp | TATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTAAAGTGCTTCAGCTCTaGGGACACTGGCCTTCCCAC | + |
Preference number: 2 (lower is better) Translates to: YFYIVIPTMLTLYDHVSAKVLQL*GHWPSH Trigger: GTGGGAAGGCCAGTGTCCTCAGAGCTGAAGCACTTT...AGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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3UTR-3UTR GCA 90 bp | GACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATAAAGTCTGCATTATGCTTCTGGGTTACAGACACTaGATTACCTTTGGGAAAAGC | + |
Preference number: 2 (lower is better) Translates to: DLGPLYQSSTQNKVCIMLLGYRH*ITFGKS Trigger: GCTTTTCCCAAAGGTAATGCAGTGTCTGTAACCCAG...AAGCATAATGCAGACTTTATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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3UTR-3UTR GCA 90 bp | ACAAACATTTCTCAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGAGGCAGGCCAGTACTTaGAGCGCTCCAGAAGTTTTT | + |
Preference number: 2 (lower is better) Translates to: TNISQQIYSWERLCKVKWRQAST*SAPEVF Trigger: AAAAACTTCTGGAGCGCTGCAAGTACTGGCCTGCCT...CCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGAGAAATGTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
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3UTR-3UTR CCA 90 bp | TATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCCACTGTTACCACGCTaGGTTACAGACACTGCATTA | + |
Preference number: 2 (lower is better) Translates to: YFYIVIPTMLTLYDHVSAPLLPR*VTDTAL Trigger: TAATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGG...AGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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3UTR-3UTR GCA 90 bp | TATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCTGGGTTACAGACACTaGATTACCTTTGGGAAAAGC | + |
Preference number: 2 (lower is better) Translates to: YFYIVIPTMLTLYDHVSALGYRH*ITFGKS Trigger: GCTTTTCCCAAAGGTAATGCAGTGTCTGTAACCCAG...AGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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3UTR-3UTR GCA 90 bp | TGGGAGCATTCCAAAGAACTGTCCATATATTTTTACATCGTCATTCCAACTATGCTGGGTTACAGACACTaGATTACCTTTGGGAAAAGC | + |
Preference number: 2 (lower is better) Translates to: WEHSKELSIYFYIVIPTMLGYRH*ITFGKS Trigger: GCTTTTCCCAAAGGTAATGCAGTGTCTGTAACCCAG...CATAGTTGGAATGACGATGTAAAAATATATGGACAGTTCTTTGGAATGCTCCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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3UTR-3UTR GCA 90 bp | TTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCACACTCAAAATAAAGTCTaGATTATGCTTCTCAGAGCA | + |
Preference number: 2 (lower is better) Translates to: FYIVIPTMLTLYDHVSAHTQNKV*IMLLRA Trigger: TGCTCTGAGAAGCATAATGCAGACTTTATTTTGAGT...GTGAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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3UTR-3UTR GCA 90 bp | TATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTACTCAAAATAAAGTCTaGATTATGCTTCTCAGAGCA | + |
Preference number: 2 (lower is better) Translates to: YFYIVIPTMLTLYDHVSATQNKV*IMLLRA Trigger: TGCTCTGAGAAGCATAATGCAGACTTTATTTTGAGT...AGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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3UTR TCA 72 bp | TTCTGCCAGGTAGGACTAGGGCATCACTCACTGCTCTaGGGTCGAATCCATTTCAAGGCGTGTCTTGGTGGC | + |
Preference number: 3 (lower is better) Translates to: FCQVGLGHHSLL*GRIHFKACLGG Trigger: GCCACCAAGACACGCCTTGAAATGGATTCGACCTCAGAGCAGTGAGTGATGCCCTAGTCCTACCTGGCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220660.2 |
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3UTR GCA 72 bp | ACAGACACTGCATTACCTTTGGGAAAAGCTGAAAAGTaGTTCAGCTCTGAGGACACTGGCCTTCCCACAGCA | + |
Preference number: 3 (lower is better) Translates to: TDTALPLGKAEK*FSSEDTGLPTA Trigger: TGCTGTGGGAAGGCCAGTGTCCTCAGAGCTGAAGCACTTTTCAGCTTTTCCCAAAGGTAATGCAGTGTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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3UTR CCA 72 bp | TGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTaGGTTACAGACACTGCATTACCTTTGGGAAAAGCT | + |
Preference number: 3 (lower is better) Translates to: CLSFKAWPLLPR*VTDTALPLGKA Trigger: AGCTTTTCCCAAAGGTAATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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3UTR CCA 72 bp | GCTCTGAGGTCGAATCCATTTCAAGGCGTGTCTTGGTaGCACAGTAATGGTGGGGTGATAAAATGTGCAGTC | + |
Preference number: 3 (lower is better) Translates to: ALRSNPFQGVSW*HSNGGVIKCAV Trigger: GACTGCACATTTTATCACCCCACCATTACTGTGCCACCAAGACACGCCTTGAAATGGATTCGACCTCAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220660.2 |
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3UTR CCA 72 bp | ACTGCTCTGAGGTCGAATCCATTTCAAGGCGTGTCTTaGTGGCACAGTAATGGTGGGGTGATAAAATGTGCA | + |
Preference number: 3 (lower is better) Translates to: TALRSNPFQGVS*WHSNGGVIKCA Trigger: TGCACATTTTATCACCCCACCATTACTGTGCCACCAAGACACGCCTTGAAATGGATTCGACCTCAGAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220660.2 |
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3UTR-3UTR CAA 90 bp | ACAAACATTTCTCAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGCAGGCAGGCCAGTACTaGCAGCGCTCCAGAAGTTTT | + |
Preference number: 3 (lower is better) Translates to: TNISQQIYSWERLCKVKWQAGQY*QRSRSF Trigger: AAAACTTCTGGAGCGCTGCAAGTACTGGCCTGCCTG...CCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGAGAAATGTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
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3UTR GCA 72 bp | GGTCCACTCTACCAAAGTAGCACTCAAAATAAAGTCTaGATTATGCTTCTCAGAGCAAATTCATTTAGACAC | + |
Preference number: 3 (lower is better) Translates to: GPLYQSSTQNKV*IMLLRANSFRH Trigger: GTGTCTAAATGAATTTGCTCTGAGAAGCATAATGCAGACTTTATTTTGAGTGCTACTTTGGTAGAGTGGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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3UTR GCA 72 bp | AACATTTCTCAGCAAATTTACAGTTGGGAAAGGCTTTaGAAGGTGAAATGGGATGATGGTATACACACTCAT | + |
Preference number: 3 (lower is better) Translates to: NISQQIYSWERL*KVKWDDGIHTH Trigger: ATGAGTGTGTATACCATCATCCCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGAGAAATGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
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3UTR GCA 72 bp | AACTGTCCATATATTTTTACATCGTCATTCCAACTATaGTTACCCTTTATGACCATGTCTCTGCTCACTTTC | + |
Preference number: 3 (lower is better) Translates to: NCPYIFTSSFQL*LPFMTMSLLTF Trigger: GAAAGTGAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAATATATGGACAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | GCTCTGAGGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCATCCGGATCTTGCGGCTaGTCTCGGTGCCGATTTCCA | + |
Preference number: 4 (lower is better) Translates to: ALRTLAFPQHYSPKLQVPSGSCG*SRCRFP Trigger: TGGAAATCGGCACCGAGATCAGCCGCAAGATCCGGA...TGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCCTCAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR GCA 90 bp | GCTCTGAGGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCACTGGGGGCCCTGTTTTaGCCCTGGACCATTTCTGCT | + |
Preference number: 4 (lower is better) Translates to: ALRTLAFPQHYSPKLQVPLGALF*PWTISA Trigger: AGCAGAAATGGTCCAGGGGCAAAACAGGGCCCCCAG...TGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCCTCAGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | GCTCTGAGGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCAGCTGCTAAGCACTGGTaGCTCACACAACCGTCCTGC | + |
Preference number: 4 (lower is better) Translates to: ALRTLAFPQHYSPKLQVPAAKHW*LTQPSC Trigger: GCAGGACGGTTGTGTGAGCCACCAGTGCTTAGCAGC...TGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCCTCAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | GCTCTGAGGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCAAGGCTTTGCTGGTACTaGCACGCTGCTGGACAAGCT | + |
Preference number: 4 (lower is better) Translates to: ALRTLAFPQHYSPKLQVPRLCWY*HAAGQA Trigger: AGCTTGTCCAGCAGCGTGTCAGTACCAGCAAAGCCT...TGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCCTCAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR GCA 90 bp | GCTCTGAGGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCATGCCTGCTCAGCAAATaGAACTGCTGTGGGTGGAGG | + |
Preference number: 4 (lower is better) Translates to: ALRTLAFPQHYSPKLQVPCLLSK*NCCGWR Trigger: CCTCCACCCACAGCAGTTGCATTTGCTGAGCAGGCA...TGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCCTCAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | CCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGATCCGGATCTTGCGGCTaGTCTCGGTGCCGATTTCCA | + |
Preference number: 4 (lower is better) Translates to: PKLPQFQSLATVTTLGYRSGSCG*SRCRFP Trigger: TGGAAATCGGCACCGAGATCAGCCGCAAGATCCGGA...TCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | GGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCATTACCAATCCGGATCTTGCGGCTaGTCTCGGTGCCGATTTCCA | + |
Preference number: 4 (lower is better) Translates to: GHWPSHSTTALSCKYHYQSGSCG*SRCRFP Trigger: TGGAAATCGGCACCGAGATCAGCCGCAAGATCCGGA...TTGGTAATGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR GCA 90 bp | AAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACAGGGACGGCAGCTTCGTaGCTTCTCTCATCTCCCCGA | + |
Preference number: 4 (lower is better) Translates to: KAASVSKPGHCYHAGLQTGTAAS*LLSSPR Trigger: TCGGGGAGATGAGAGAAGGCACGAAGCTGCCGTCCC...TGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR GCA 90 bp | TGTTCCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTAGGGACGGCAGCTTCGTaGCTTCTCTCATCTCCCCGA | + |
Preference number: 4 (lower is better) Translates to: CSKAASVSKPGHCYHAGLGTAAS*LLSSPR Trigger: TCGGGGAGATGAGAGAAGGCACGAAGCTGCCGTCCC...TAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR GCA 90 bp | GCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATCTGGGGGCCCTGTTTTaGCCCTGGACCATTTCTGCT | + |
Preference number: 4 (lower is better) Translates to: ASVSKPGHCYHAGLQTLHLGALF*PWTISA Trigger: AGCAGAAATGGTCCAGGGGCAAAACAGGGCCCCCAG...ATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | TGTTCCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTAGGTGGAGGAGACCTCTaGGTCCCTTGTTTGAGGCTG | + |
Preference number: 4 (lower is better) Translates to: CSKAASVSKPGHCYHAGLGGGDL*VPCLRL Trigger: CAGCCTCAAACAAGGGACTCAGAGGTCTCCTCCACC...TAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | GGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCATTACCAAGTACTGACACGCTGCTaGACAAGCTTCCTATGCGGG | + |
Preference number: 4 (lower is better) Translates to: GHWPSHSTTALSCKYHYQVLTRC*TSFLCG Trigger: CCCGCATAGGAAGCTTGTCCAGCAGCGTGTCAGTAC...TTGGTAATGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | CCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGAGTACTGACACGCTGCTaGACAAGCTTCCTATGCGGG | + |
Preference number: 4 (lower is better) Translates to: PKLPQFQSLATVTTLGYRVLTRC*TSFLCG Trigger: CCCGCATAGGAAGCTTGTCCAGCAGCGTGTCAGTAC...TCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | AAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACAAGGCTTTGCTGGTACTaGCACGCTGCTGGACAAGCT | + |
Preference number: 4 (lower is better) Translates to: KAASVSKPGHCYHAGLQTRLCWY*HAAGQA Trigger: AGCTTGTCCAGCAGCGTGTCAGTACCAGCAAAGCCT...TGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | TGTTCCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTAAGGCTTTGCTGGTACTaGCACGCTGCTGGACAAGCT | + |
Preference number: 4 (lower is better) Translates to: CSKAASVSKPGHCYHAGLRLCWY*HAAGQA Trigger: AGCTTGTCCAGCAGCGTGTCAGTACCAGCAAAGCCT...TAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | AAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATAAGGTGTCCTaGAAGGACCCGAAGGGCATC | + |
Preference number: 4 (lower is better) Translates to: KAASVSKPGHCYHAGLQTLHKVS*KDPKGI Trigger: GATGCCCTTCGGGTCCTTTCAGGACACCTTATGCAG...TGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
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CDS-3UTR GCA 90 bp | GCTCTGAGGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCATGGACAAGCTTCCTATaGGGGTCCCATAATCCTCAT | + |
Preference number: 4 (lower is better) Translates to: ALRTLAFPQHYSPKLQVPWTSFL*GSHNPH Trigger: ATGAGGATTATGGGACCCGCATAGGAAGCTTGTCCA...TGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCCTCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR GCA 90 bp | AAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACAGACCCGAAGGGCATCTaGAGTCTTCATCCCCGAATC | + |
Preference number: 4 (lower is better) Translates to: KAASVSKPGHCYHAGLQTDPKGI*SLHPRI Trigger: GATTCGGGGATGAAGACTGCAGATGCCCTTCGGGTC...TGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
||
CDS-3UTR CCA 90 bp | AAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACAAGGCGTGTCTTGGTaGCACAGTAATGGTGGGGTG | + |
Preference number: 4 (lower is better) Translates to: KAASVSKPGHCYHAGLQTQGVSW*HSNGGV Trigger: CACCCCACCATTACTGTGCCACCAAGACACGCCTTG...TGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | TGTTCCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAAGGCGTGTCTTGGTaGCACAGTAATGGTGGGGTG | + |
Preference number: 4 (lower is better) Translates to: CSKAASVSKPGHCYHAGLQGVSW*HSNGGV Trigger: CACCCCACCATTACTGTGCCACCAAGACACGCCTTG...TAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR CCA 90 bp | AAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACATACGCTGCTAAGCACTaGTGGCTCACACAACCGTCC | + |
Preference number: 4 (lower is better) Translates to: KAASVSKPGHCYHAGLQTYAAKH*WLTQPS Trigger: GGACGGTTGTGTGAGCCACCAGTGCTTAGCAGCGTA...TGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | TGTTCCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTAGTACTGACACGCTGCTaGACAAGCTTCCTATGCGGG | + |
Preference number: 4 (lower is better) Translates to: CSKAASVSKPGHCYHAGLVLTRC*TSFLCG Trigger: CCCGCATAGGAAGCTTGTCCAGCAGCGTGTCAGTAC...TAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR TCA 90 bp | GCTCTGAGGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCACAAGGTGAAATGGGATaGTGGTATACACACTCATCC | + |
Preference number: 4 (lower is better) Translates to: ALRTLAFPQHYSPKLQVPQGEMG*WYTHSS Trigger: GGATGAGTGTGTATACCATCATCCCATTTCACCTTG...TGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCCTCAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR GCA 90 bp | GCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATAGGCAGGCCAGTACTTaGAGCGCTCCAGAAGTTTTT | + |
Preference number: 4 (lower is better) Translates to: ASVSKPGHCYHAGLQTLHRQAST*SAPEVF Trigger: AAAAACTTCTGGAGCGCTGCAAGTACTGGCCTGCCT...ATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR GCA 90 bp | ACTTTCAGAAAGGCACAGGACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATGGGACGGCAGCTTCGTaGCTTCTCTCATCTCCCCGA | + |
Preference number: 4 (lower is better) Translates to: TFRKAQDLGPLYQSSTQNGTAAS*LLSSPR Trigger: TCGGGGAGATGAGAGAAGGCACGAAGCTGCCGTCCC...ATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTCCTGTGCCTTTCTGAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | TGTTCCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAAATGCAACTGCTGTaGGTGGAGGAGACCTCTGAG | + |
Preference number: 4 (lower is better) Translates to: CSKAASVSKPGHCYHAGLQMQLL*VEETSE Trigger: CTCAGAGGTCTCCTCCACCCACAGCAGTTGCATTTG...TAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
||
CDS-3UTR GCA 90 bp | GCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATTGGACAAGCTTCCTATaGGGGTCCCATAATCCTCAT | + |
Preference number: 4 (lower is better) Translates to: ASVSKPGHCYHAGLQTLHWTSFL*GSHNPH Trigger: ATGAGGATTATGGGACCCGCATAGGAAGCTTGTCCA...ATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | GGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCATTACCAAGACTATCGAAGATGCTaGCGTCAGGAGACTTTAGAC | + |
Preference number: 4 (lower is better) Translates to: GHWPSHSTTALSCKYHYQDYRRC*RQETLD Trigger: GTCTAAAGTCTCCTGACGCCAGCATCTTCGATAGTC...TTGGTAATGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR CCA 90 bp | AAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACAATCTTCAGAGGGTGCTaGTTCCCTCAGAGGTTTCAC | + |
Preference number: 4 (lower is better) Translates to: KAASVSKPGHCYHAGLQTIFRGC*FPQRFH Trigger: GTGAAACCTCTGAGGGAACCAGCACCCTCTGAAGAT...TGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR CCA 90 bp | CCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATTATCTTCAGAGGGTGCTaGTTCCCTCAGAGGTTTCAC | + |
Preference number: 4 (lower is better) Translates to: PQFQSLATVTTLGYRHCIIFRGC*FPQRFH Trigger: GTGAAACCTCTGAGGGAACCAGCACCCTCTGAAGAT...AATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | ACTTTCAGAAAGGCACAGGACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATGCTGCTAAGCACTGGTaGCTCACACAACCGTCCTGC | + |
Preference number: 4 (lower is better) Translates to: TFRKAQDLGPLYQSSTQNAAKHW*LTQPSC Trigger: GCAGGACGGTTGTGTGAGCCACCAGTGCTTAGCAGC...ATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTCCTGTGCCTTTCTGAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | CCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGAGAGAAGTTCGAGTTCTaGGAGCAACTGGAAGTGTCT | + |
Preference number: 4 (lower is better) Translates to: PKLPQFQSLATVTTLGYREKFEF*EQLEVS Trigger: AGACACTTCCAGTTGCTCCCAGAACTCGAACTTCTC...TCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | GCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATCAAGGTGAAATGGGATaGTGGTATACACACTCATCC | + |
Preference number: 4 (lower is better) Translates to: ASVSKPGHCYHAGLQTLHQGEMG*WYTHSS Trigger: GGATGAGTGTGTATACCATCATCCCATTTCACCTTG...ATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | CCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGATCAGGTCTCGTACACTaGGTGTTAAACCTACAGTGT | + |
Preference number: 4 (lower is better) Translates to: PKLPQFQSLATVTTLGYRSGLVH*VLNLQC Trigger: ACACTGTAGGTTTAACACTCAGTGTACGAGACCTGA...TCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | TGTTCCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACATGGAGCCATACGGTaGATCGAATTGTGTTGTTCC | + |
Preference number: 4 (lower is better) Translates to: CSKAASVSKPGHCYHAGLHGAIR*IELCCS Trigger: GGAACAACACAATTCGATTCACCGTATGGCTCCATG...TAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | CCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATTCATGGAGCCATACGGTaGATCGAATTGTGTTGTTCC | + |
Preference number: 4 (lower is better) Translates to: PQFQSLATVTTLGYRHCIHGAIR*IELCCS Trigger: GGAACAACACAATTCGATTCACCGTATGGCTCCATG...AATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | AAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACATCTCATCTCCCCGACTaGAACTGCTCTTGTTTGAAG | + |
Preference number: 4 (lower is better) Translates to: KAASVSKPGHCYHAGLQTSHLPD*NCSCLK Trigger: CTTCAAACAAGAGCAGTTTCAGTCGGGGAGATGAGA...TGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | GGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCATTACCAAGGATTTCTGCTCCTGTaGACTTGTAGAAACTCTGGA | + |
Preference number: 4 (lower is better) Translates to: GHWPSHSTTALSCKYHYQGFLLL*TCRNSG Trigger: TCCAGAGTTTCTACAAGTTCACAGGAGCAGAAATCC...TTGGTAATGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | GCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATGCTAGCAATTCTTCTTaGGAAGTTCGAGTTCTGGGA | + |
Preference number: 4 (lower is better) Translates to: ASVSKPGHCYHAGLQTLHASNSS*EVRVLG Trigger: TCCCAGAACTCGAACTTCTCAAGAAGAATTGCTAGC...ATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | GGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCATTACCAAGCTAGCAATTCTTCTTaGGAAGTTCGAGTTCTGGGA | + |
Preference number: 4 (lower is better) Translates to: GHWPSHSTTALSCKYHYQASNSS*EVRVLG Trigger: TCCCAGAACTCGAACTTCTCAAGAAGAATTGCTAGC...TTGGTAATGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR GCA 90 bp | CCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATTGTGAGTACCAGTGTCTaGATTTCTACTTGCAGGTGG | + |
Preference number: 4 (lower is better) Translates to: PQFQSLATVTTLGYRHCIVSTSV*ISTCRW Trigger: CCACCTGCAAGTAGAAATGCAGACACTGGTACTCAC...AATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | GCTCTGAGGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCACTTTGCAAGGTGAAATaGGATGATGGTATACACACT | + |
Preference number: 4 (lower is better) Translates to: ALRTLAFPQHYSPKLQVPLCKVK*DDGIHT Trigger: AGTGTGTATACCATCATCCCATTTCACCTTGCAAAG...TGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCCTCAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | ACTTTCAGAAAGGCACAGGACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATTACGCTGCTAAGCACTaGTGGCTCACACAACCGTCC | + |
Preference number: 4 (lower is better) Translates to: TFRKAQDLGPLYQSSTQNYAAKH*WLTQPS Trigger: GGACGGTTGTGTGAGCCACCAGTGCTTAGCAGCGTA...ATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTCCTGTGCCTTTCTGAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | AAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACAGAGAAGTTCGAGTTCTaGGAGCAACTGGAAGTGTCT | + |
Preference number: 4 (lower is better) Translates to: KAASVSKPGHCYHAGLQTEKFEF*EQLEVS Trigger: AGACACTTCCAGTTGCTCCCAGAACTCGAACTTCTC...TGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | GGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCATTACCAATTCATCCCCGAATCCTaGTTGGGTGTCACTACTATT | + |
Preference number: 4 (lower is better) Translates to: GHWPSHSTTALSCKYHYQFIPES*LGVTTI Trigger: AATAGTAGTGACACCCAACCAGGATTCGGGGATGAA...TTGGTAATGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | CCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATTTCAGGTCTCGTACACTaGGTGTTAAACCTACAGTGT | + |
Preference number: 4 (lower is better) Translates to: PQFQSLATVTTLGYRHCISGLVH*VLNLQC Trigger: ACACTGTAGGTTTAACACTCAGTGTACGAGACCTGA...AATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | AAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACAGGATTTCTGCTCCTGTaGACTTGTAGAAACTCTGGA | + |
Preference number: 4 (lower is better) Translates to: KAASVSKPGHCYHAGLQTGFLLL*TCRNSG Trigger: TCCAGAGTTTCTACAAGTTCACAGGAGCAGAAATCC...TGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | AAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACAGCTAGCAATTCTTCTTaGGAAGTTCGAGTTCTGGGA | + |
Preference number: 4 (lower is better) Translates to: KAASVSKPGHCYHAGLQTASNSS*EVRVLG Trigger: TCCCAGAACTCGAACTTCTCAAGAAGAATTGCTAGC...TGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | GGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCATTACCAAAAACCTACAGTGTTTTaGGTGGTAGAAGGGACATTC | + |
Preference number: 4 (lower is better) Translates to: GHWPSHSTTALSCKYHYQKPTVF*VVEGTF Trigger: GAATGTCCCTTCTACCACCCAAAACACTGTAGGTTT...TTGGTAATGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | CCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATTAGCTTGTTTAGAAGGTaGAAGAGAAGGTCTCCTCTC | + |
Preference number: 4 (lower is better) Translates to: PQFQSLATVTTLGYRHCISLFRR*KRRSPL Trigger: GAGAGGAGACCTTCTCTTCCACCTTCTAAACAAGCT...AATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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3UTR CAA 72 bp | CTGTTACCACGCTGGGTTACAGACACTGCATTACCTTaGGGAAAAGCTGAAAAGTGCTTCAGCTCTGAGGAC | + |
Preference number: 4 (lower is better) Translates to: LLPRWVTDTALP*GKAEKCFSSED Trigger: GTCCTCAGAGCTGAAGCACTTTTCAGCTTTTCCCAAAGGTAATGCAGTGTCTGTAACCCAGCGTGGTAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | GCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATAGCTCCATCATCATATaGATGTCTGACATTAGTGGA | + |
Preference number: 4 (lower is better) Translates to: ASVSKPGHCYHAGLQTLHSSIII*MSDISG Trigger: TCCACTAATGTCAGACATTCATATGATGATGGAGCT...ATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | CCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGATATCCAAGTTGTTTCTaGAGAAGGGGCTATAAGTGT | + |
Preference number: 4 (lower is better) Translates to: PKLPQFQSLATVTTLGYRYPSCF*RRGYKC Trigger: ACACTTATAGCCCCTTCTTCAGAAACAACTTGGATA...TCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | TCTCAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGGATGATGGTCTGCATAAGGTGTCCTaGAAGGACCCGAAGGGCATC | + |
Preference number: 4 (lower is better) Translates to: SQQIYSWERLCKVKWDDGLHKVS*KDPKGI Trigger: GATGCCCTTCGGGTCCTTTCAGGACACCTTATGCAG...ACCATCATCCCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
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CDS-3UTR GCA 90 bp | CCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATTTTTTTCTGGTTTCTGTaGCACACTCAGGTCAGTCAT | + |
Preference number: 4 (lower is better) Translates to: PQFQSLATVTTLGYRHCIFFWFL*HTQVSH Trigger: ATGACTGACCTGAGTGTGGCACAGAAACCAGAAAAA...AATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGG 48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR GCA 90 bp | TGTTCCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTAAGTTGGGAAAGGCTTTaGAAGGTGAAATGGGATGAT | + |
Preference number: 4 (lower is better) Translates to: CSKAASVSKPGHCYHAGLSWERL*KVKWDD Trigger: ATCATCCCATTTCACCTTGCAAAGCCTTTCCCAACT...TAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR GCA 90 bp | AAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACAAGTTGGGAAAGGCTTTaGAAGGTGAAATGGGATGAT | + |
Preference number: 4 (lower is better) Translates to: KAASVSKPGHCYHAGLQTSWERL*KVKWDD Trigger: ATCATCCCATTTCACCTTGCAAAGCCTTTCCCAACT...TGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR GCA 90 bp | GGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCATTACCAAGTCTGCATTTCTACTTaGAGGTGGTCGATAAATTTC | + |
Preference number: 4 (lower is better) Translates to: GHWPSHSTTALSCKYHYQVCIST*RWSINF Trigger: GAAATTTATCGACCACCTGCAAGTAGAAATGCAGAC...TTGGTAATGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR TCA 90 bp | ACTTTCAGAAAGGCACAGGACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATTCTCATCTCCCCGACTaGAACTGCTCTTGTTTGAAG | + |
Preference number: 4 (lower is better) Translates to: TFRKAQDLGPLYQSSTQNSHLPD*NCSCLK Trigger: CTTCAAACAAGAGCAGTTTCAGTCGGGGAGATGAGA...ATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTCCTGTGCCTTTCTGAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | TGTTCCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTAAGCTCCATCATCATATaGATGTCTGACATTAGTGGA | + |
Preference number: 4 (lower is better) Translates to: CSKAASVSKPGHCYHAGLSSIII*MSDISG Trigger: TCCACTAATGTCAGACATTCATATGATGATGGAGCT...TAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR GCA 90 bp | GGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCATTACCAAACATTAGTGGATTTCTaGTCCTGTGAACTTGTAGAA | + |
Preference number: 4 (lower is better) Translates to: GHWPSHSTTALSCKYHYQTLVDF*SCELVE Trigger: TTCTACAAGTTCACAGGAGCAGAAATCCACTAATGT...TTGGTAATGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR GCA 90 bp | CCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATTGTCTGCATTTCTACTTaGAGGTGGTCGATAAATTTC | + |
Preference number: 4 (lower is better) Translates to: PQFQSLATVTTLGYRHCIVCIST*RWSINF Trigger: GAAATTTATCGACCACCTGCAAGTAGAAATGCAGAC...AATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR GCA 90 bp | ATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCCTGGGGGCCCTGTTTTaGCCCTGGACCATTTCTGCT | + |
Preference number: 4 (lower is better) Translates to: IFTSSFQLCLPFMTMSLLLGALF*PWTISA Trigger: AGCAGAAATGGTCCAGGGGCAAAACAGGGCCCCCAG...GAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR GCA 90 bp | AACATTTCTCAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGGATCTGGGGGCCCTGTTTTaGCCCTGGACCATTTCTGCT | + |
Preference number: 4 (lower is better) Translates to: NISQQIYSWERLCKVKWDLGALF*PWTISA Trigger: AGCAGAAATGGTCCAGGGGCAAAACAGGGCCCCCAG...ATCCCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGAGAAATGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
||
CDS-3UTR GCA 90 bp | CAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGGATGATGGTATAGACCCGAAGGGCATCTaGAGTCTTCATCCCCGAATC | + |
Preference number: 4 (lower is better) Translates to: QQIYSWERLCKVKWDDGIDPKGI*SLHPRI Trigger: GATTCGGGGATGAAGACTGCAGATGCCCTTCGGGTC...TATACCATCATCCCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
||
CDS-3UTR GCA 90 bp | GGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCATTACCAATATAAACTTGGGACTTaGAGGTTTATCTGGTTGTAC | + |
Preference number: 4 (lower is better) Translates to: GHWPSHSTTALSCKYHYQYKLGT*RFIWLY Trigger: GTACAACCAGATAAACCTGCAAGTCCCAAGTTTATA...TTGGTAATGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
||
CDS-3UTR CCA 90 bp | CCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATTTGTTTCTACCATTACTaGATCAATTTGCAGTCGGGA | + |
Preference number: 4 (lower is better) Translates to: PQFQSLATVTTLGYRHCICFYHY*INLQSG Trigger: TCCCGACTGCAAATTGATCCAGTAATGGTAGAAACA...AATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR CCA 90 bp | TTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCACCAAGGCGTGTCTTGGTaGCACAGTAATGGTGGGGTG | + |
Preference number: 4 (lower is better) Translates to: FYIVIPTMLTLYDHVSAHQGVSW*HSNGGV Trigger: CACCCCACCATTACTGTGCCACCAAGACACGCCTTG...GTGAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR CCA 90 bp | GGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCATTACCAAAAGTGTCTGTTTCTGTaGAACTGCAGAATAGTTAGT | + |
Preference number: 4 (lower is better) Translates to: GHWPSHSTTALSCKYHYQKCLFL*NCRIVS Trigger: ACTAACTATTCTGCAGTTCCACAGAAACAGACACTT...TTGGTAATGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR CCA 90 bp | ACTTTCAGAAAGGCACAGGACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATGAGAAGTTCGAGTTCTaGGAGCAACTGGAAGTGTCT | + |
Preference number: 4 (lower is better) Translates to: TFRKAQDLGPLYQSSTQNEKFEF*EQLEVS Trigger: AGACACTTCCAGTTGCTCCCAGAACTCGAACTTCTC...ATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTCCTGTGCCTTTCTGAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR CCA 90 bp | CCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATTTGTCTGCATGGACCATaGATTCCATGTCATAGTAAT | + |
Preference number: 4 (lower is better) Translates to: PQFQSLATVTTLGYRHCICLHGP*IPCHSN Trigger: ATTACTATGACATGGAATCCATGGTCCATGCAGACA...AATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
||
CDS-3UTR TCA 90 bp | ACTTTCAGAAAGGCACAGGACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATCAAGGTGAAATGGGATaGTGGTATACACACTCATCC | + |
Preference number: 4 (lower is better) Translates to: TFRKAQDLGPLYQSSTQNQGEMG*WYTHSS Trigger: GGATGAGTGTGTATACCATCATCCCATTTCACCTTG...ATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTCCTGTGCCTTTCTGAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR TCA 90 bp | GACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATAAAGTCTGCATTATGCTTTTGTTTGAAGGCACGTaGCTATCGAAGATGCTGGCG | + |
Preference number: 4 (lower is better) Translates to: DLGPLYQSSTQNKVCIMLLFEGT*LSKMLA Trigger: CGCCAGCATCTTCGATAGTCACGTGCCTTCAAACAA...AAGCATAATGCAGACTTTATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR GCA 90 bp | TGTTCCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTAATTACTGGATCAATTTaGAGTCGGGATAACAATTGC | + |
Preference number: 4 (lower is better) Translates to: CSKAASVSKPGHCYHAGLITGSI*SRDNNC Trigger: GCAATTGTTATCCCGACTGCAAATTGATCCAGTAAT...TAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR GCA 90 bp | TGTTCCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTAACATTAGTGGATTTCTaGTCCTGTGAACTTGTAGAA | + |
Preference number: 4 (lower is better) Translates to: CSKAASVSKPGHCYHAGLTLVDF*SCELVE Trigger: TTCTACAAGTTCACAGGAGCAGAAATCCACTAATGT...TAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR GCA 90 bp | GCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATTGTATTATCTCCTTTTaGTTCCTCTTCTTTAACAGG | + |
Preference number: 4 (lower is better) Translates to: ASVSKPGHCYHAGLQTLHCIISF*FLFFNR Trigger: CCTGTTAAAGAAGAGGAAGCAAAAGGAGATAATACA...ATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | GGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCATTACCAAATCAATGAGATCATCTaGTTCTGGCTTGATATCAAT | + |
Preference number: 4 (lower is better) Translates to: GHWPSHSTTALSCKYHYQINEII*FWLDIN Trigger: ATTGATATCAAGCCAGAACCAGATGATCTCATTGAT...TTGGTAATGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR CCA 90 bp | CCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGAATCAATGAGATCATCTaGTTCTGGCTTGATATCAAT | + |
Preference number: 4 (lower is better) Translates to: PKLPQFQSLATVTTLGYRINEII*FWLDIN Trigger: ATTGATATCAAGCCAGAACCAGATGATCTCATTGAT...TCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR CCA 90 bp | TATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTGCTGCTAAGCACTGGTaGCTCACACAACCGTCCTGC | + |
Preference number: 4 (lower is better) Translates to: YFYIVIPTMLTLYDHVSAAAKHW*LTQPSC Trigger: GCAGGACGGTTGTGTGAGCCACCAGTGCTTAGCAGC...AGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR CCA 90 bp | ACTTTCAGAAAGGCACAGGACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATAGCTTGTTTAGAAGGTaGAAGAGAAGGTCTCCTCTC | + |
Preference number: 4 (lower is better) Translates to: TFRKAQDLGPLYQSSTQNSLFRR*KRRSPL Trigger: GAGAGGAGACCTTCTCTTCCACCTTCTAAACAAGCT...ATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTCCTGTGCCTTTCTGAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | GACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATAAAGTCTGCATTATGCTTGCCCTGTTTTGCCCCTaGACCATTTCTGCTAGCAAT | + |
Preference number: 4 (lower is better) Translates to: DLGPLYQSSTQNKVCIMLALFCP*TISASN Trigger: ATTGCTAGCAGAAATGGTCCAGGGGCAAAACAGGGC...AAGCATAATGCAGACTTTATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | TCTCAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGGATGATGGTGCCCTGTTTTGCCCCTaGACCATTTCTGCTAGCAAT | + |
Preference number: 4 (lower is better) Translates to: SQQIYSWERLCKVKWDDGALFCP*TISASN Trigger: ATTGCTAGCAGAAATGGTCCAGGGGCAAAACAGGGC...ACCATCATCCCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
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CDS-3UTR CCA 90 bp | GACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATAAAGTCTGCATTATGCTTCAGTCATCTCGGCGTTaGAAAAGCTACCATCTGGGT | + |
Preference number: 4 (lower is better) Translates to: DLGPLYQSSTQNKVCIMLQSSRR*KSYHLG Trigger: ACCCAGATGGTAGCTTTTCCAACGCCGAGATGACTG...AAGCATAATGCAGACTTTATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | ACTAGGGCATCACTCACTGCTCTGAGGTCGAATCCATTTCAAGGCGTGTCTTGGAAAACTTCTTACTTTTaGGTGGTAGAAGGGACATTC | + |
Preference number: 4 (lower is better) Translates to: TRASLTALRSNPFQGVSWKTSYF*VVEGTF Trigger: GAATGTCCCTTCTACCACCCAAAAGTAAGAAGTTTT...CCAAGACACGCCTTGAAATGGATTCGACCTCAGAGCAGTGAGTGATGCCCTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220660.2 |
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CDS-3UTR TCA 90 bp | ACTTTCAGAAAGGCACAGGACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATAAAGGCTTTGCAAGGTaGAATGGGATGATGGTATAC | + |
Preference number: 4 (lower is better) Translates to: TFRKAQDLGPLYQSSTQNKGFAR*NGMMVY Trigger: GTATACCATCATCCCATTTCACCTTGCAAAGCCTTT...ATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTCCTGTGCCTTTCTGAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | TTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCACCACATCTCCTCCTCTTaGTCTGACATGTATCCTGGG | + |
Preference number: 4 (lower is better) Translates to: FYIVIPTMLTLYDHVSAHHISSS*SDMYPG Trigger: CCCAGGATACATGTCAGATCAAGAGGAGGAGATGTG...GTGAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
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CDS-3UTR GCA 90 bp | ACTTTCAGAAAGGCACAGGACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATTTTTTCTGGTTTCTGTaGCACACTCAGGTCAGTCAT | + |
Preference number: 4 (lower is better) Translates to: TFRKAQDLGPLYQSSTQNFFWFL*HTQVSH Trigger: ATGACTGACCTGAGTGTGGCACAGAAACCAGAAAAA...ATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTCCTGTGCCTTTCTGAAAGT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR GCA 90 bp | AAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACATGTATTATCTCCTTTTaGTTCCTCTTCTTTAACAGG | + |
Preference number: 4 (lower is better) Translates to: KAASVSKPGHCYHAGLQTCIISF*FLFFNR Trigger: CCTGTTAAAGAAGAGGAAGCAAAAGGAGATAATACA...TGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR GCA 90 bp | CCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATTTGTATTATCTCCTTTTaGTTCCTCTTCTTTAACAGG | + |
Preference number: 4 (lower is better) Translates to: PQFQSLATVTTLGYRHCICIISF*FLFFNR Trigger: CCTGTTAAAGAAGAGGAAGCAAAAGGAGATAATACA...AATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | ACTTTCAGAAAGGCACAGGACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATCAGCAAATTTACAGTTaGGAAAGGCTTTGCAAGGTG | + |
Preference number: 4 (lower is better) Translates to: TFRKAQDLGPLYQSSTQNQQIYS*ERLCKV Trigger: CACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTG...ATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTCCTGTGCCTTTCTGAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | GACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATAAAGTCTGCATTATGCTTGACTATCGAAGATGCTaGCGTCAGGAGACTTTAGAC | + |
Preference number: 4 (lower is better) Translates to: DLGPLYQSSTQNKVCIMLDYRRC*RQETLD Trigger: GTCTAAAGTCTCCTGACGCCAGCATCTTCGATAGTC...AAGCATAATGCAGACTTTATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | TGGGAGCATTCCAAAGAACTGTCCATATATTTTTACATCGTCATTCCAACTATGTACGCTGCTAAGCACTaGTGGCTCACACAACCGTCC | + |
Preference number: 4 (lower is better) Translates to: WEHSKELSIYFYIVIPTMYAAKH*WLTQPS Trigger: GGACGGTTGTGTGAGCCACCAGTGCTTAGCAGCGTA...CATAGTTGGAATGACGATGTAAAAATATATGGACAGTTCTTTGGAATGCTCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | TCTCAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGGATGATGGTGAGAAGTTCGAGTTCTaGGAGCAACTGGAAGTGTCT | + |
Preference number: 4 (lower is better) Translates to: SQQIYSWERLCKVKWDDGEKFEF*EQLEVS Trigger: AGACACTTCCAGTTGCTCCCAGAACTCGAACTTCTC...ACCATCATCCCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
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CDS-3UTR TCA 90 bp | ATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCTTGTTTGAAGGCACGTaGCTATCGAAGATGCTGGCG | + |
Preference number: 4 (lower is better) Translates to: IFTSSFQLCLPFMTMSLLLFEGT*LSKMLA Trigger: CGCCAGCATCTTCGATAGTCACGTGCCTTCAAACAA...GAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | TTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCACTCTCATCTCCCCGACTaGAACTGCTCTTGTTTGAAG | + |
Preference number: 4 (lower is better) Translates to: FYIVIPTMLTLYDHVSAHSHLPD*NCSCLK Trigger: CTTCAAACAAGAGCAGTTTCAGTCGGGGAGATGAGA...GTGAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR GCA 90 bp | GACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATAAAGTCTGCATTATGCTTTGGGGTGATAAAATGTaGAGTCAGGTCTCGTACACT | + |
Preference number: 4 (lower is better) Translates to: DLGPLYQSSTQNKVCIMLWGDKM*SQVSYT Trigger: AGTGTACGAGACCTGACTGCACATTTTATCACCCCA...AAGCATAATGCAGACTTTATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR GCA 90 bp | TTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCACTGGACAAGCTTCCTATaGGGGTCCCATAATCCTCAT | + |
Preference number: 4 (lower is better) Translates to: FYIVIPTMLTLYDHVSAHWTSFL*GSHNPH Trigger: ATGAGGATTATGGGACCCGCATAGGAAGCTTGTCCA...GTGAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR GCA 90 bp | TGGGAGCATTCCAAAGAACTGTCCATATATTTTTACATCGTCATTCCAACTATGGGTCCTCAAGCTGCCTaGTCAGCAAATGCAACTGCT | + |
Preference number: 4 (lower is better) Translates to: WEHSKELSIYFYIVIPTMGPQAA*SANATA Trigger: AGCAGTTGCATTTGCTGAGCAGGCAGCTTGAGGACC...CATAGTTGGAATGACGATGTAAAAATATATGGACAGTTCTTTGGAATGCTCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
||
CDS-3UTR GCA 90 bp | AACATTTCTCAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGGATTCATCTCGGCGTGTCTaGATAAGGTGTCCTGAAAGG | + |
Preference number: 4 (lower is better) Translates to: NISQQIYSWERLCKVKWDSSRRV*IRCPER Trigger: CCTTTCAGGACACCTTATGCAGACACGCCGAGATGA...ATCCCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGAGAAATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
||
CDS-3UTR CCA 90 bp | ACTTTCAGAAAGGCACAGGACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATTGTTTCTACCATTACTaGATCAATTTGCAGTCGGGA | + |
Preference number: 4 (lower is better) Translates to: TFRKAQDLGPLYQSSTQNCFYHY*INLQSG Trigger: TCCCGACTGCAAATTGATCCAGTAATGGTAGAAACA...ATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTCCTGTGCCTTTCTGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR CCA 90 bp | ATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCATCTTCAGAGGGTGCTaGTTCCCTCAGAGGTTTCAC | + |
Preference number: 4 (lower is better) Translates to: IFTSSFQLCLPFMTMSLLIFRGC*FPQRFH Trigger: GTGAAACCTCTGAGGGAACCAGCACCCTCTGAAGAT...GAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR CCA 90 bp | GACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATAAAGTCTGCATTATGCTTAGCTTGTTTAGAAGGTaGAAGAGAAGGTCTCCTCTC | + |
Preference number: 4 (lower is better) Translates to: DLGPLYQSSTQNKVCIMLSLFRR*KRRSPL Trigger: GAGAGGAGACCTTCTCTTCCACCTTCTAAACAAGCT...AAGCATAATGCAGACTTTATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | ACTTTCAGAAAGGCACAGGACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATACTTGCAGGTTTATCTaGTTGTACAAGATCTCGTGT | + |
Preference number: 4 (lower is better) Translates to: TFRKAQDLGPLYQSSTQNTCRFI*LYKISC Trigger: ACACGAGATCTTGTACAACCAGATAAACCTGCAAGT...ATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTCCTGTGCCTTTCTGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
||
CDS-3UTR TCA 90 bp | TGGGAGCATTCCAAAGAACTGTCCATATATTTTTACATCGTCATTCCAACTATGTTGTTTGAAGGCACGTaGCTATCGAAGATGCTGGCG | + |
Preference number: 4 (lower is better) Translates to: WEHSKELSIYFYIVIPTMLFEGT*LSKMLA Trigger: CGCCAGCATCTTCGATAGTCACGTGCCTTCAAACAA...CATAGTTGGAATGACGATGTAAAAATATATGGACAGTTCTTTGGAATGCTCCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR TCA 90 bp | TTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCACGAAACTGCTCTTGTTTaGAGGCACGTGACTATCGAA | + |
Preference number: 4 (lower is better) Translates to: FYIVIPTMLTLYDHVSAHETALV*RHVTIE Trigger: TTCGATAGTCACGTGCCTTCAAACAAGAGCAGTTTC...GTGAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR GCA 90 bp | ACTTTCAGAAAGGCACAGGACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATATTACTGGATCAATTTaGAGTCGGGATAACAATTGC | + |
Preference number: 4 (lower is better) Translates to: TFRKAQDLGPLYQSSTQNITGSI*SRDNNC Trigger: GCAATTGTTATCCCGACTGCAAATTGATCCAGTAAT...ATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTCCTGTGCCTTTCTGAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR GCA 90 bp | TGGGAGCATTCCAAAGAACTGTCCATATATTTTTACATCGTCATTCCAACTATGAGGCAGGCCAGTACTTaGAGCGCTCCAGAAGTTTTT | + |
Preference number: 4 (lower is better) Translates to: WEHSKELSIYFYIVIPTMRQAST*SAPEVF Trigger: AAAAACTTCTGGAGCGCTGCAAGTACTGGCCTGCCT...CATAGTTGGAATGACGATGTAAAAATATATGGACAGTTCTTTGGAATGCTCCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR GCA 90 bp | TATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTAGGCAGGCCAGTACTTaGAGCGCTCCAGAAGTTTTT | + |
Preference number: 4 (lower is better) Translates to: YFYIVIPTMLTLYDHVSARQAST*SAPEVF Trigger: AAAAACTTCTGGAGCGCTGCAAGTACTGGCCTGCCT...AGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR GCA 90 bp | TTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCACTGGGGTGATAAAATGTaGAGTCAGGTCTCGTACACT | + |
Preference number: 4 (lower is better) Translates to: FYIVIPTMLTLYDHVSAHWGDKM*SQVSYT Trigger: AGTGTACGAGACCTGACTGCACATTTTATCACCCCA...GTGAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR GCA 90 bp | TATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCACATCTTCAGAGGGTaGTGGTTCCCTCAGAGGTTT | + |
Preference number: 4 (lower is better) Translates to: YFYIVIPTMLTLYDHVSAHIFRG*WFPQRF Trigger: AAACCTCTGAGGGAACCAGCACCCTCTGAAGATGTG...AGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR GCA 90 bp | TGGGAGCATTCCAAAGAACTGTCCATATATTTTTACATCGTCATTCCAACTATGCACATCTTCAGAGGGTaGTGGTTCCCTCAGAGGTTT | + |
Preference number: 4 (lower is better) Translates to: WEHSKELSIYFYIVIPTMHIFRG*WFPQRF Trigger: AAACCTCTGAGGGAACCAGCACCCTCTGAAGATGTG...CATAGTTGGAATGACGATGTAAAAATATATGGACAGTTCTTTGGAATGCTCCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR GCA 90 bp | ATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCGTGAGTACCAGTGTCTaGATTTCTACTTGCAGGTGG | + |
Preference number: 4 (lower is better) Translates to: IFTSSFQLCLPFMTMSLLVSTSV*ISTCRW Trigger: CCACCTGCAAGTAGAAATGCAGACACTGGTACTCAC...GAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR CCA 90 bp | TGGGAGCATTCCAAAGAACTGTCCATATATTTTTACATCGTCATTCCAACTATGGCCCTGTTTTGCCCCTaGACCATTTCTGCTAGCAAT | + |
Preference number: 4 (lower is better) Translates to: WEHSKELSIYFYIVIPTMALFCP*TISASN Trigger: ATTGCTAGCAGAAATGGTCCAGGGGCAAAACAGGGC...CATAGTTGGAATGACGATGTAAAAATATATGGACAGTTCTTTGGAATGCTCCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR TCA 90 bp | TGGGAGCATTCCAAAGAACTGTCCATATATTTTTACATCGTCATTCCAACTATGCATGGAGCCATACGGTaGATCGAATTGTGTTGTTCC | + |
Preference number: 4 (lower is better) Translates to: WEHSKELSIYFYIVIPTMHGAIR*IELCCS Trigger: GGAACAACACAATTCGATTCACCGTATGGCTCCATG...CATAGTTGGAATGACGATGTAAAAATATATGGACAGTTCTTTGGAATGCTCCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR TCA 90 bp | ATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCGGATTTCTGCTCCTGTaGACTTGTAGAAACTCTGGA | + |
Preference number: 4 (lower is better) Translates to: IFTSSFQLCLPFMTMSLLGFLLL*TCRNSG Trigger: TCCAGAGTTTCTACAAGTTCACAGGAGCAGAAATCC...GAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR TCA 90 bp | GACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATAAAGTCTGCATTATGCTTAGCTCCATCATCATATaGATGTCTGACATTAGTGGA | + |
Preference number: 4 (lower is better) Translates to: DLGPLYQSSTQNKVCIMLSSIII*MSDISG Trigger: TCCACTAATGTCAGACATTCATATGATGATGGAGCT...AAGCATAATGCAGACTTTATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR TCA 90 bp | ACAAACATTTCTCAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGGCTAGCAATTCTTCTTaGGAAGTTCGAGTTCTGGGA | + |
Preference number: 4 (lower is better) Translates to: TNISQQIYSWERLCKVKWASNSS*EVRVLG Trigger: TCCCAGAACTCGAACTTCTCAAGAAGAATTGCTAGC...CCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGAGAAATGTTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
||
CDS-3UTR GCA 90 bp | TATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTGTGAGTACCAGTGTCTaGATTTCTACTTGCAGGTGG | + |
Preference number: 4 (lower is better) Translates to: YFYIVIPTMLTLYDHVSAVSTSV*ISTCRW Trigger: CCACCTGCAAGTAGAAATGCAGACACTGGTACTCAC...AGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR GCA 90 bp | ATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCACAAGATCTCGTGTCTaGATAAGGTGTCCTGAAAGG | + |
Preference number: 4 (lower is better) Translates to: IFTSSFQLCLPFMTMSLLTRSRV*IRCPER Trigger: CCTTTCAGGACACCTTATGCAGACACGAGATCTTGT...GAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
||
CDS-3UTR CCA 90 bp | TTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCACCAGCAAATTTACAGTTaGGAAAGGCTTTGCAAGGTG | + |
Preference number: 4 (lower is better) Translates to: FYIVIPTMLTLYDHVSAHQQIYS*ERLCKV Trigger: CACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTG...GTGAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR CCA 90 bp | TGGGAGCATTCCAAAGAACTGTCCATATATTTTTACATCGTCATTCCAACTATGGACTATCGAAGATGCTaGCGTCAGGAGACTTTAGAC | + |
Preference number: 4 (lower is better) Translates to: WEHSKELSIYFYIVIPTMDYRRC*RQETLD Trigger: GTCTAAAGTCTCCTGACGCCAGCATCTTCGATAGTC...CATAGTTGGAATGACGATGTAAAAATATATGGACAGTTCTTTGGAATGCTCCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR CCA 90 bp | ATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCTTGACATTAGCCGGGTaGAAGCTCCATCATCATATG | + |
Preference number: 4 (lower is better) Translates to: IFTSSFQLCLPFMTMSLLLTLAG*KLHHHM Trigger: CATATGATGATGGAGCTTCCACCCGGCTAATGTCAA...GAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | ACTTTCAGAAAGGCACAGGACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATATCAATGAGATCATCTaGTTCTGGCTTGATATCAAT | + |
Preference number: 4 (lower is better) Translates to: TFRKAQDLGPLYQSSTQNINEII*FWLDIN Trigger: ATTGATATCAAGCCAGAACCAGATGATCTCATTGAT...ATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTCCTGTGCCTTTCTGAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | AACATTTCTCAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGGATAGCTTGTTTAGAAGGTaGAAGAGAAGGTCTCCTCTC | + |
Preference number: 4 (lower is better) Translates to: NISQQIYSWERLCKVKWDSLFRR*KRRSPL Trigger: GAGAGGAGACCTTCTCTTCCACCTTCTAAACAAGCT...ATCCCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGAGAAATGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
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CDS-3UTR CCA 90 bp | ACAAACATTTCTCAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGGATCTTGTGTCTGCATaGACCATGGATTCCATGTCA | + |
Preference number: 4 (lower is better) Translates to: TNISQQIYSWERLCKVKWDLVSA*TMDSMS Trigger: TGACATGGAATCCATGGTCCATGCAGACACAAGATC...CCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGAGAAATGTTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
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CDS-3UTR CCA 90 bp | AACATTTCTCAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGGATTTCATCCCCGAATCCTaGTTGGGTGTCACTACTATT | + |
Preference number: 4 (lower is better) Translates to: NISQQIYSWERLCKVKWDFIPES*LGVTTI Trigger: AATAGTAGTGACACCCAACCAGGATTCGGGGATGAA...ATCCCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGAGAAATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
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CDS-3UTR TCA 90 bp | TGGGAGCATTCCAAAGAACTGTCCATATATTTTTACATCGTCATTCCAACTATGTCAGTCATCTCGGCTTaGCTCATCTCCATTGTTTCT | + |
Preference number: 4 (lower is better) Translates to: WEHSKELSIYFYIVIPTMSVISA*LISIVS Trigger: AGAAACAATGGAGATGAGTCAAGCCGAGATGACTGA...CATAGTTGGAATGACGATGTAAAAATATATGGACAGTTCTTTGGAATGCTCCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110104.10 |
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CDS-3UTR TCA 90 bp | TATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTTCAGGTCTCGTACACTaGGTGTTAAACCTACAGTGT | + |
Preference number: 4 (lower is better) Translates to: YFYIVIPTMLTLYDHVSASGLVH*VLNLQC Trigger: ACACTGTAGGTTTAACACTCAGTGTACGAGACCTGA...AGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | TATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTGAAACTGCTCTTGTTTaGAGGCACGTGACTATCGAA | + |
Preference number: 4 (lower is better) Translates to: YFYIVIPTMLTLYDHVSAETALV*RHVTIE Trigger: TTCGATAGTCACGTGCCTTCAAACAAGAGCAGTTTC...AGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | TTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCACTATCCAAGTTGTTTCTaGAGAAGGGGCTATAAGTGT | + |
Preference number: 4 (lower is better) Translates to: FYIVIPTMLTLYDHVSAHYPSCF*RRGYKC Trigger: ACACTTATAGCCCCTTCTTCAGAAACAACTTGGATA...GTGAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR GCA 90 bp | ATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCAGTTGGGAAAGGCTTTaGAAGGTGAAATGGGATGAT | + |
Preference number: 4 (lower is better) Translates to: IFTSSFQLCLPFMTMSLLSWERL*KVKWDD Trigger: ATCATCCCATTTCACCTTGCAAAGCCTTTCCCAACT...GAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR GCA 90 bp | GACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATAAAGTCTGCATTATGCTTACATTAGTGGATTTCTaGTCCTGTGAACTTGTAGAA | + |
Preference number: 4 (lower is better) Translates to: DLGPLYQSSTQNKVCIMLTLVDF*SCELVE Trigger: TTCTACAAGTTCACAGGAGCAGAAATCCACTAATGT...AAGCATAATGCAGACTTTATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | ATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCAAACCTACAGTGTTTTaGGTGGTAGAAGGGACATTC | + |
Preference number: 4 (lower is better) Translates to: IFTSSFQLCLPFMTMSLLKPTVF*VVEGTF Trigger: GAATGTCCCTTCTACCACCCAAAACACTGTAGGTTT...GAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | TGGGAGCATTCCAAAGAACTGTCCATATATTTTTACATCGTCATTCCAACTATGGATCTTGTGTCTGCATaGACCATGGATTCCATGTCA | + |
Preference number: 4 (lower is better) Translates to: WEHSKELSIYFYIVIPTMDLVSA*TMDSMS Trigger: TGACATGGAATCCATGGTCCATGCAGACACAAGATC...CATAGTTGGAATGACGATGTAAAAATATATGGACAGTTCTTTGGAATGCTCCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | ATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCTATCCAAGTTGTTTCTaGAGAAGGGGCTATAAGTGT | + |
Preference number: 4 (lower is better) Translates to: IFTSSFQLCLPFMTMSLLYPSCF*RRGYKC Trigger: ACACTTATAGCCCCTTCTTCAGAAACAACTTGGATA...GAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | ATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCCTTCTTCAGAATAAATaGTCTTGTGTCTGCATGGAC | + |
Preference number: 4 (lower is better) Translates to: IFTSSFQLCLPFMTMSLLLLQNK*SCVCMD Trigger: GTCCATGCAGACACAAGATCATTTATTCTGAAGAAG...GAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
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CDS-3UTR TCA 90 bp | ACAAACATTTCTCAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGCTTCTTCAGAATAAATaGTCTTGTGTCTGCATGGAC | + |
Preference number: 4 (lower is better) Translates to: TNISQQIYSWERLCKVKWLLQNK*SCVCMD Trigger: GTCCATGCAGACACAAGATCATTTATTCTGAAGAAG...CCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGAGAAATGTTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
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CDS-3UTR CCA 90 bp | AACATTTCTCAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGGATTGTTTCTACCATTACTaGATCAATTTGCAGTCGGGA | + |
Preference number: 4 (lower is better) Translates to: NISQQIYSWERLCKVKWDCFYHY*INLQSG Trigger: TCCCGACTGCAAATTGATCCAGTAATGGTAGAAACA...ATCCCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGAGAAATGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
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CDS-3UTR CCA 90 bp | ATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCCTTTGCAAGGTGAAATaGGATGATGGTATACACACT | + |
Preference number: 4 (lower is better) Translates to: IFTSSFQLCLPFMTMSLLLCKVK*DDGIHT Trigger: AGTGTGTATACCATCATCCCATTTCACCTTGCAAAG...GAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | TATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTAAACCTACAGTGTTTTaGGTGGTAGAAGGGACATTC | + |
Preference number: 4 (lower is better) Translates to: YFYIVIPTMLTLYDHVSAKPTVF*VVEGTF Trigger: GAATGTCCCTTCTACCACCCAAAACACTGTAGGTTT...AGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CCA 90 bp | ACAAACATTTCTCAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGTGTCTGCATGGACCATaGATTCCATGTCATAGTAAT | + |
Preference number: 4 (lower is better) Translates to: TNISQQIYSWERLCKVKWCLHGP*IPCHSN Trigger: ATTACTATGACATGGAATCCATGGTCCATGCAGACA...CCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGAGAAATGTTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
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CDS-3UTR GCA 90 bp | ACAAACATTTCTCAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGATTACTGGATCAATTTaGAGTCGGGATAACAATTGC | + |
Preference number: 4 (lower is better) Translates to: TNISQQIYSWERLCKVKWITGSI*SRDNNC Trigger: GCAATTGTTATCCCGACTGCAAATTGATCCAGTAAT...CCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGAGAAATGTTTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
||
CDS-3UTR CCA 90 bp | ACAAACATTTCTCAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGAAGTGTCTGTTTCTGTaGAACTGCAGAATAGTTAGT | + |
Preference number: 4 (lower is better) Translates to: TNISQQIYSWERLCKVKWKCLFL*NCRIVS Trigger: ACTAACTATTCTGCAGTTCCACAGAAACAGACACTT...CCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGAGAAATGTTTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
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CDS-3UTR GCA 90 bp | AACATTTCTCAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGGATTGTATTATCTCCTTTTaGTTCCTCTTCTTTAACAGG | + |
Preference number: 4 (lower is better) Translates to: NISQQIYSWERLCKVKWDCIISF*FLFFNR Trigger: CCTGTTAAAGAAGAGGAAGCAAAAGGAGATAATACA...ATCCCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGAGAAATGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
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CDS-3UTR CCA 90 bp | TATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTAAGTGTCTGTTTCTGTaGAACTGCAGAATAGTTAGT | + |
Preference number: 4 (lower is better) Translates to: YFYIVIPTMLTLYDHVSAKCLFL*NCRIVS Trigger: ACTAACTATTCTGCAGTTCCACAGAAACAGACACTT...AGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS GCA 90 bp | CCGGGCCCACCCGCCCCGTTACTCCTGGCAACCGCCTGCCCGCCATaGCCAGCGCCCGCCGACGCGGGCCTCACCCGGATCTTGCGGCTG | + |
Preference number: 5 (lower is better) Translates to: PGPPAPLLLATACPP*PAPADAGLTRILRL Trigger: CAGCCGCAAGATCCGGGTGAGGCCCGCGTCGGCGGGCGCTGGGCATGGCGGGCAGGCGGTTGCCAGGAGTAACGGGGCGGGTGGGCCCGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223083.2 |
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CDS-3UTR CAA 90 bp | GCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATATGGCACTCCGGATCTaGCGGCTGATCTCGGTGCCG | + |
Preference number: 5 (lower is better) Translates to: ASVSKPGHCYHAGLQTLHMALRI*RLISVP Trigger: CGGCACCGAGATCAGCCGCAAGATCCGGAGTGCCAT...ATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | CCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATTATGGCACTCCGGATCTaGCGGCTGATCTCGGTGCCG | + |
Preference number: 5 (lower is better) Translates to: PQFQSLATVTTLGYRHCIMALRI*RLISVP Trigger: CGGCACCGAGATCAGCCGCAAGATCCGGAGTGCCAT...AATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | AAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACAATGGCACTCCGGATCTaGCGGCTGATCTCGGTGCCG | + |
Preference number: 5 (lower is better) Translates to: KAASVSKPGHCYHAGLQTMALRI*RLISVP Trigger: CGGCACCGAGATCAGCCGCAAGATCCGGAGTGCCAT...TGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | GCTCTGAGGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCAGGATACCTGGCTGCTTaGTACATCCAGCTGCTTGGC | + |
Preference number: 5 (lower is better) Translates to: ALRTLAFPQHYSPKLQVPGYLAA*YIQLLG Trigger: GCCAAGCAGCTGGATGTACAAAGCAGCCAGGTATCC...TGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCCTCAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS TCA 90 bp | CAAGGGGAGGGACGGCAGCTTCGTGCCTTCTCTCATCTCCCCGACTaGAACTGCTCTTGTTTGAAGGCACGTGACTATCGAAGATGCTGG | + |
Preference number: 5 (lower is better) Translates to: QGEGRQLRAFSHLPD*NCSCLKARDYRRCW Trigger: CCAGCATCTTCGATAGTCACGTGCCTTCAAACAAGAGCAGTTTCAGTCGGGGAGATGAGAGAAGGCACGAAGCTGCCGTCCCTCCCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 ENSMUST00000223083.2 |
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CDS CCA 90 bp | TGCCACACTCAGGTCAGTCATCTCGGCGTTGGAAAAGCTACCATCTaGGTCCTCAAGCTGCCTGCTCAGCAAATGCAACTGCTGTGGGTG | + |
Preference number: 5 (lower is better) Translates to: CHTQVSHLGVGKATI*VLKLPAQQMQLLWV Trigger: CACCCACAGCAGTTGCATTTGCTGAGCAGGCAGCTTGAGGACCCAGATGGTAGCTTTTCCAACGCCGAGATGACTGACCTGAGTGTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | CCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATTTCTGGGGGCCCTGTTTaGCCCCTGGACCATTTCTGC | + |
Preference number: 5 (lower is better) Translates to: PQFQSLATVTTLGYRHCISGGPV*PLDHFC Trigger: GCAGAAATGGTCCAGGGGCAAAACAGGGCCCCCAGA...AATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | AAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACATCTGGGGGCCCTGTTTaGCCCCTGGACCATTTCTGC | + |
Preference number: 5 (lower is better) Translates to: KAASVSKPGHCYHAGLQTSGGPV*PLDHFC Trigger: GCAGAAATGGTCCAGGGGCAAAACAGGGCCCCCAGA...TGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | GCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATCAGGCAGGCCAGTACTaGCAGCGCTCCAGAAGTTTT | + |
Preference number: 5 (lower is better) Translates to: ASVSKPGHCYHAGLQTLHQAGQY*QRSRSF Trigger: AAAACTTCTGGAGCGCTGCAAGTACTGGCCTGCCTG...ATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | GGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCATTACCAAGGATACCTGGCTGCTTaGTACATCCAGCTGCTTGGC | + |
Preference number: 5 (lower is better) Translates to: GHWPSHSTTALSCKYHYQGYLAA*YIQLLG Trigger: GCCAAGCAGCTGGATGTACAAAGCAGCCAGGTATCC...TTGGTAATGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | TGTTCCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTAGTCTCCTCTCAGGCTTaGCTGGTACTGACACGCTGC | + |
Preference number: 5 (lower is better) Translates to: CSKAASVSKPGHCYHAGLVSSQA*LVLTRC Trigger: GCAGCGTGTCAGTACCAGCAAAGCCTGAGAGGAGAC...TAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | GCTCTGAGGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCAATCCCCGAATCCTGGTaGGGTGTCACTACTATTTCC | + |
Preference number: 5 (lower is better) Translates to: ALRTLAFPQHYSPKLQVPIPESW*GVTTIS Trigger: GGAAATAGTAGTGACACCCAACCAGGATTCGGGGAT...TGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCCTCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
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CDS GCA 90 bp | TCAGGTCTAGAACTAGAAACAGCAAGGGGAGGGACGGCAGCTTCGTaGCTTCTCTCATCTCCCCGACTGAAACTGCTCTTGTTTGAAGGC | + |
Preference number: 5 (lower is better) Translates to: SGLELETARGGTAAS*LLSSPRLKLLLFEG Trigger: GCCTTCAAACAAGAGCAGTTTCAGTCGGGGAGATGAGAGAAGGCACGAAGCTGCCGTCCCTCCCCTTGCTGTTTCTAGTTCTAGACCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 ENSMUST00000223083.2 |
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CDS-3UTR CAA 90 bp | CCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATTCAGGCAGGCCAGTACTaGCAGCGCTCCAGAAGTTTT | + |
Preference number: 5 (lower is better) Translates to: PQFQSLATVTTLGYRHCIQAGQY*QRSRSF Trigger: AAAACTTCTGGAGCGCTGCAAGTACTGGCCTGCCTG...AATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS TCA 90 bp | AGCAGGGAAGTAACGGCAGAGCTGGCCATTAGAAGACGGTGCTGGTaGCGACACTGGTTTTGGAGTCAGTATCGAGGCTCTTCTACTCAT | + |
Preference number: 5 (lower is better) Translates to: SREVTAELAIRRRCW*RHWFWSQYRGSSTH Trigger: ATGAGTAGAAGAGCCTCGATACTGACTCCAAAACCAGTGTCGTCACCAGCACCGTCTTCTAATGGCCAGCTCTGCCGTTACTTCCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021399.9 ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 ENSMUST00000220660.2 |
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CDS GCA 90 bp | ATACCTGGCTGCTTTGTACATCCAGCTGCTTGGCAGCGTGAGCACTaGTTTGCTGCGGATGAAGTTGCAGCCTGTTTAAGTGAGTACCAG | + |
Preference number: 5 (lower is better) Translates to: IPGCFVHPAAWQREH*FAADEVAACLSEYQ Trigger: CTGGTACTCACTTAAACAGGCTGCAACTTCATCCGCAGCAAAGCAGTGCTCACGCTGCCAAGCAGCTGGATGTACAAAGCAGCCAGGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS CCA 90 bp | GTTTCTGAAGAAGGGGCTATAAGTGTCTTCTACGCTGCTAAGCACTaGTGGCTCACACAACCGTCCTGCTTCGGATACCTGGCTGCTTTG | + |
Preference number: 5 (lower is better) Translates to: VSEEGAISVFYAAKH*WLTQPSCFGYLAAL Trigger: CAAAGCAGCCAGGTATCCGAAGCAGGACGGTTGTGTGAGCCACCAGTGCTTAGCAGCGTAGAAGACACTTATAGCCCCTTCTTCAGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS CCA 90 bp | CCTGAAAGGACCCGAAGGGCATCTGCAGTCTTCATCCCCGAATCCTaGTTGGGTGTCACTACTATTTCCTCAGACAGCTTTGGCTTCTTC | + |
Preference number: 5 (lower is better) Translates to: PERTRRASAVFIPES*LGVTTISSDSFGFF Trigger: GAAGAAGCCAAAGCTGTCTGAGGAAATAGTAGTGACACCCAACCAGGATTCGGGGATGAAGACTGCAGATGCCCTTCGGGTCCTTTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110105.10 ENSMUST00000223451.2 |
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CDS-3UTR CAA 90 bp | CCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGAAGACCTCTGAGTCCCTaGTTTGAGGCTGAAGTTTGG | + |
Preference number: 5 (lower is better) Translates to: PKLPQFQSLATVTTLGYRRPLSP*FEAEVW Trigger: CCAAACTTCAGCCTCAAACAAGGGACTCAGAGGTCT...TCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | GCTCTGAGGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCATCAGCAAATTTACAGTaGGGAAAGGCTTTGCAAGGT | + |
Preference number: 5 (lower is better) Translates to: ALRTLAFPQHYSPKLQVPSANLQ*GKALQG Trigger: ACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGA...TGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCCTCAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | AGGTCGAATCCATTTCAAGGCGTGTCTTGGTGGCACAGTAATGGTGGGGTGATAGTGACGACACTGGTTTaGGAGTCAGTATCGAGGCTC | + |
Preference number: 5 (lower is better) Translates to: RSNPFQGVSWWHSNGGVIVTTLV*ESVSRL Trigger: GAGCCTCGATACTGACTCCAAAACCAGTGTCGTCAC...TATCACCCCACCATTACTGTGCCACCAAGACACGCCTTGAAATGGATTCGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220660.2 |
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CDS-3UTR CAA 90 bp | ACTTTCAGAAAGGCACAGGACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATGTCTCCTCTCAGGCTTaGCTGGTACTGACACGCTGC | + |
Preference number: 5 (lower is better) Translates to: TFRKAQDLGPLYQSSTQNVSSQA*LVLTRC Trigger: GCAGCGTGTCAGTACCAGCAAAGCCTGAGAGGAGAC...ATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTCCTGTGCCTTTCTGAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS GCA 90 bp | CTTACAAGCAGGGAAGTAACGGCAGAGCTGGCCATTAGAAGACGGTaGTGGTTTTGGAGTCAGTATCGAGGCTCTTCTACTCATGTGAGT | + |
Preference number: 5 (lower is better) Translates to: LTSREVTAELAIRRR*WFWSQYRGSSTHVS Trigger: ACTCACATGAGTAGAAGAGCCTCGATACTGACTCCAAAACCAGCACCGTCTTCTAATGGCCAGCTCTGCCGTTACTTCCCTGCTTGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221532.2 |
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CDS CCA 90 bp | AAAGGACCCGAAGGGCATCTGCAGTCTTCATCCCCGAATCCTGGTTaGGTGTCACTACTATTTCCTCAGACAGCTTTGGCTTCTTCAGAA | + |
Preference number: 5 (lower is better) Translates to: KGPEGHLQSSSPNPG*VSLLFPQTALASSE Trigger: TTCTGAAGAAGCCAAAGCTGTCTGAGGAAATAGTAGTGACACCCAACCAGGATTCGGGGATGAAGACTGCAGATGCCCTTCGGGTCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110105.10 ENSMUST00000223451.2 |
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CDS-3UTR CAA 90 bp | GCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATGTGAATCGAATTGTGTaGTTCCCTAGAAACAGGGAC | + |
Preference number: 5 (lower is better) Translates to: ASVSKPGHCYHAGLQTLHVNRIV*FPRNRD Trigger: GTCCCTGTTTCTAGGGAACAACACAATTCGATTCAC...ATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | GCTCTGAGGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCATTCTCCTGCACAAAATaGAGGTCTTCATCAATGAGA | + |
Preference number: 5 (lower is better) Translates to: ALRTLAFPQHYSPKLQVPFSCTK*RSSSMR Trigger: TCTCATTGATGAAGACCTCAATTTTGTGCAGGAGAA...TGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCCTCAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | CCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGATCAGCAAATTTACAGTaGGGAAAGGCTTTGCAAGGT | + |
Preference number: 5 (lower is better) Translates to: PKLPQFQSLATVTTLGYRSANLQ*GKALQG Trigger: ACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGA...TCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | CCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATTGTGAATCGAATTGTGTaGTTCCCTAGAAACAGGGAC | + |
Preference number: 5 (lower is better) Translates to: PQFQSLATVTTLGYRHCIVNRIV*FPRNRD Trigger: GTCCCTGTTTCTAGGGAACAACACAATTCGATTCAC...AATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | TGTTCCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTAGTGAATCGAATTGTGTaGTTCCCTAGAAACAGGGAC | + |
Preference number: 5 (lower is better) Translates to: CSKAASVSKPGHCYHAGLVNRIV*FPRNRD Trigger: GTCCCTGTTTCTAGGGAACAACACAATTCGATTCAC...TAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | TCTCAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGGATGATGGTGTCTCCTCTCAGGCTTaGCTGGTACTGACACGCTGC | + |
Preference number: 5 (lower is better) Translates to: SQQIYSWERLCKVKWDDGVSSQA*LVLTRC Trigger: GCAGCGTGTCAGTACCAGCAAAGCCTGAGAGGAGAC...ACCATCATCCCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
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CDS-3UTR CAA 90 bp | CAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGGATGATGGTATATCTGGGGGCCCTGTTTaGCCCCTGGACCATTTCTGC | + |
Preference number: 5 (lower is better) Translates to: QQIYSWERLCKVKWDDGISGGPV*PLDHFC Trigger: GCAGAAATGGTCCAGGGGCAAAACAGGGCCCCCAGA...TATACCATCATCCCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
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CDS-3UTR CAA 90 bp | GCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATGTCAGTCATCTCGGCTaGACTTTTTCCTGTATTATC | + |
Preference number: 5 (lower is better) Translates to: ASVSKPGHCYHAGLQTLHVSHLG*TFSCII Trigger: GATAATACAGGAAAAAGTCAAGCCGAGATGACTGAC...ATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057000.17 |
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CDS-3UTR CAA 90 bp | AAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACATGCAGGTTTATCTGGTaGTACAAGATCTCGTGTCTG | + |
Preference number: 5 (lower is better) Translates to: KAASVSKPGHCYHAGLQTCRFIW*YKISCL Trigger: CAGACACGAGATCTTGTACAACCAGATAAACCTGCA...TGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | TGTTCCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTATCAGCAAATTTACAGTaGGGAAAGGCTTTGCAAGGT | + |
Preference number: 5 (lower is better) Translates to: CSKAASVSKPGHCYHAGLSANLQ*GKALQG Trigger: ACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGA...TAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | GGACACTGGCCTTCCCACAGCACTACAGCCCTAAGCTGCAAGTACCATTACCAATTCTCCTGCACAAAATaGAGGTCTTCATCAATGAGA | + |
Preference number: 5 (lower is better) Translates to: GHWPSHSTTALSCKYHYQFSCTK*RSSSMR Trigger: TCTCATTGATGAAGACCTCAATTTTGTGCAGGAGAA...TTGGTAATGGTACTTGCAGCTTAGGGCTGTAGTGCTGTGGGAAGGCCAGTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | CCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGATGTCTGCATTTCTACTaGCAGGTGGTCGATAAATTT | + |
Preference number: 5 (lower is better) Translates to: PKLPQFQSLATVTTLGYRCLHFY*QVVDKF Trigger: AAATTTATCGACCACCTGCAAGTAGAAATGCAGACA...TCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | CCAAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACTCATTTTATCCAAGTaGTTTCTGAAGAAGGGGCTA | + |
Preference number: 5 (lower is better) Translates to: PKLPQFQSLATVTTLGYRLILSK*FLKKGL Trigger: TAGCCCCTTCTTCAGAAACAACTTGGATAAAATGAG...TCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | AAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTTTGTTACAGACTCTaGAGCTTCAGAGATAGCCTT | + |
Preference number: 5 (lower is better) Translates to: KAASVSKPGHCYHAGLQTLCYRL*SFRDSL Trigger: AAGGCTATCTCTGAAGCTCAAGAGTCTGTAACAAAG...TGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | CCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATTCTTTGTTACAGACTCTaGAGCTTCAGAGATAGCCTT | + |
Preference number: 5 (lower is better) Translates to: PQFQSLATVTTLGYRHCILCYRL*SFRDSL Trigger: AAGGCTATCTCTGAAGCTCAAGAGTCTGTAACAAAG...AATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | ATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCTCTGGGGGCCCTGTTTaGCCCCTGGACCATTTCTGC | + |
Preference number: 5 (lower is better) Translates to: IFTSSFQLCLPFMTMSLLSGGPV*PLDHFC Trigger: GCAGAAATGGTCCAGGGGCAAAACAGGGCCCCCAGA...GAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | GACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATAAAGTCTGCATTATGCTTGTGACGACACTGGTTTaGGAGTCAGTATCGAGGCTC | + |
Preference number: 5 (lower is better) Translates to: DLGPLYQSSTQNKVCIMLVTTLV*ESVSRL Trigger: GAGCCTCGATACTGACTCCAAAACCAGTGTCGTCAC...AAGCATAATGCAGACTTTATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | AAAGCTGCCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACATGTCTGCATTTCTACTaGCAGGTGGTCGATAAATTT | + |
Preference number: 5 (lower is better) Translates to: KAASVSKPGHCYHAGLQTCLHFY*QVVDKF Trigger: AAATTTATCGACCACCTGCAAGTAGAAATGCAGACA...TGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGGCAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | TTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCACGGATACCTGGCTGCTTaGTACATCCAGCTGCTTGGC | + |
Preference number: 5 (lower is better) Translates to: FYIVIPTMLTLYDHVSAHGYLAA*YIQLLG Trigger: GCCAAGCAGCTGGATGTACAAAGCAGCCAGGTATCC...GTGAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | CCTCAGTTTCAAAGCCTGGCCACTGTTACCACGCTGGGTTACAGACACTGCATTCCTCTGTTGAGTTCCTaGACTTTTTCCTGTATTATC | + |
Preference number: 5 (lower is better) Translates to: PQFQSLATVTTLGYRHCIPLLSS*TFSCII Trigger: GATAATACAGGAAAAAGTCAAGGAACTCAACAGAGG...AATGCAGTGTCTGTAACCCAGCGTGGTAACAGTGGCCAGGCTTTGAAACTGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS CCA 90 bp | CCTGGACCATTTCTGCTAGCAATTCTTCTTGAGAAGTTCGAGTTCTaGGAGCAACTGGAAGTGTCTGTTTCTGTGGAACTGCAGAATAGT | + |
Preference number: 5 (lower is better) Translates to: PGPFLLAILLEKFEF*EQLEVSVSVELQNS Trigger: ACTATTCTGCAGTTCCACAGAAACAGACACTTCCAGTTGCTCCCAGAACTCGAACTTCTCAAGAAGAATTGCTAGCAGAAATGGTCCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 ENSMUST00000221532.2 ENSMUST00000223451.2 |
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CDS-3UTR CAA 90 bp | TTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCACGTGACGACACTGGTTTaGGAGTCAGTATCGAGGCTC | + |
Preference number: 5 (lower is better) Translates to: FYIVIPTMLTLYDHVSAHVTTLV*ESVSRL Trigger: GAGCCTCGATACTGACTCCAAAACCAGTGTCGTCAC...GTGAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | CAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGGATGATGGTATAATCCCCGAATCCTGGTaGGGTGTCACTACTATTTCC | + |
Preference number: 5 (lower is better) Translates to: QQIYSWERLCKVKWDDGIIPESW*GVTTIS Trigger: GGAAATAGTAGTGACACCCAACCAGGATTCGGGGAT...TATACCATCATCCCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
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CDS-3UTR CAA 90 bp | TATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTGTGACGACACTGGTTTaGGAGTCAGTATCGAGGCTC | + |
Preference number: 5 (lower is better) Translates to: YFYIVIPTMLTLYDHVSAVTTLV*ESVSRL Trigger: GAGCCTCGATACTGACTCCAAAACCAGTGTCGTCAC...AGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
||
CDS-3UTR CAA 90 bp | ACTTTCAGAAAGGCACAGGACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATTGTCTGCATTTCTACTaGCAGGTGGTCGATAAATTT | + |
Preference number: 5 (lower is better) Translates to: TFRKAQDLGPLYQSSTQNCLHFY*QVVDKF Trigger: AAATTTATCGACCACCTGCAAGTAGAAATGCAGACA...ATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTCCTGTGCCTTTCTGAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS TCA 90 bp | ACCATTACTGGATCAATTTGCAGTCGGGATAACAATTGCCTCTGTTaGGTTCCTTTCTCAACCTCTGTTAGGAAGCCAATTAGGTTTGCA | + |
Preference number: 5 (lower is better) Translates to: TITGSICSRDNNCLC*VPFSTSVRKPIRFA Trigger: TGCAAACCTAATTGGCTTCCTAACAGAGGTTGAGAAAGGAACTCAACAGAGGCAATTGTTATCCCGACTGCAAATTGATCCAGTAATGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021399.9 |
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CDS-3UTR CAA 90 bp | GACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATAAAGTCTGCATTATGCTTCTTGACTCATCTCCATaGTTTCTACCATTACTGGAT | + |
Preference number: 5 (lower is better) Translates to: DLGPLYQSSTQNKVCIMLLDSSP*FLPLLD Trigger: ATCCAGTAATGGTAGAAACAATGGAGATGAGTCAAG...AAGCATAATGCAGACTTTATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | GACCTCGGTCCACTCTACCAAAGTAGCACTCAAAATAAAGTCTGCATTATGCTTCTCATTTTATCCAAGTaGTTTCTGAAGAAGGGGCTA | + |
Preference number: 5 (lower is better) Translates to: DLGPLYQSSTQNKVCIMLLILSK*FLKKGL Trigger: TAGCCCCTTCTTCAGAAACAACTTGGATAAAATGAG...AAGCATAATGCAGACTTTATTTTGAGTGCTACTTTGGTAGAGTGGACCGAGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | CAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGGATGATGGTATACTTTGTTACAGACTCTaGAGCTTCAGAGATAGCCTT | + |
Preference number: 5 (lower is better) Translates to: QQIYSWERLCKVKWDDGILCYRL*SFRDSL Trigger: AAGGCTATCTCTGAAGCTCAAGAGTCTGTAACAAAG...TATACCATCATCCCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
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CDS TCA 90 bp | TGTCACTACTATTTCCTCAGACAGCTTTGGCTTCTTCAGAATAAATaGTCTTGTGTCTGCATGGACCATGGATTCCATGTCATAGTAATC | + |
Preference number: 5 (lower is better) Translates to: CHYYFLRQLWLLQNK*SCVCMDHGFHVIVI Trigger: GATTACTATGACATGGAATCCATGGTCCATGCAGACACAAGATCATTTATTCTGAAGAAGCCAAAGCTGTCTGAGGAAATAGTAGTGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110105.10 ENSMUST00000223451.2 |
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CDS-3UTR CAA 90 bp | TTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCACCTTGACTCATCTCCATaGTTTCTACCATTACTGGAT | + |
Preference number: 5 (lower is better) Translates to: FYIVIPTMLTLYDHVSAHLDSSP*FLPLLD Trigger: ATCCAGTAATGGTAGAAACAATGGAGATGAGTCAAG...GTGAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | CAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGGATGATGGTATACTTGACTCATCTCCATaGTTTCTACCATTACTGGAT | + |
Preference number: 5 (lower is better) Translates to: QQIYSWERLCKVKWDDGILDSSP*FLPLLD Trigger: ATCCAGTAATGGTAGAAACAATGGAGATGAGTCAAG...TATACCATCATCCCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
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CDS-3UTR CAA 90 bp | ATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCCTCATTTTATCCAAGTaGTTTCTGAAGAAGGGGCTA | + |
Preference number: 5 (lower is better) Translates to: IFTSSFQLCLPFMTMSLLLILSK*FLKKGL Trigger: TAGCCCCTTCTTCAGAAACAACTTGGATAAAATGAG...GAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | TGGGAGCATTCCAAAGAACTGTCCATATATTTTTACATCGTCATTCCAACTATGCTTTGTTACAGACTCTaGAGCTTCAGAGATAGCCTT | + |
Preference number: 5 (lower is better) Translates to: WEHSKELSIYFYIVIPTMLCYRL*SFRDSL Trigger: AAGGCTATCTCTGAAGCTCAAGAGTCTGTAACAAAG...CATAGTTGGAATGACGATGTAAAAATATATGGACAGTTCTTTGGAATGCTCCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | AACATTTCTCAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGGATCCTCTGTTGAGTTCCTaGACTTTTTCCTGTATTATC | + |
Preference number: 5 (lower is better) Translates to: NISQQIYSWERLCKVKWDPLLSS*TFSCII Trigger: GATAATACAGGAAAAAGTCAAGGAACTCAACAGAGG...ATCCCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGAGAAATGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
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CDS-3UTR CAA 90 bp | TTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTCACCATGTCATAGTAATCTaGACTCATCTCCATTGTTTC | + |
Preference number: 5 (lower is better) Translates to: FYIVIPTMLTLYDHVSAHHVIVI*THLHCF Trigger: GAAACAATGGAGATGAGTCAAGATTACTATGACATG...GTGAGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | TATTTTTACATCGTCATTCCAACTATGCTTACCCTTTATGACCATGTCTCTGCTAGCGTCACTATAAACTaGGGACTTGCAGGTTTATCT | + |
Preference number: 5 (lower is better) Translates to: YFYIVIPTMLTLYDHVSASVTIN*GLAGLS Trigger: AGATAAACCTGCAAGTCCCAAGTTTATAGTGACGCT...AGCAGAGACATGGTCATAAAGGGTAAGCATAGTTGGAATGACGATGTAAAAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
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CDS-3UTR CAA 90 bp | AACATTTCTCAGCAAATTTACAGTTGGGAAAGGCTTTGCAAGGTGAAATGGGATCATGTCATAGTAATCTaGACTCATCTCCATTGTTTC | + |
Preference number: 5 (lower is better) Translates to: NISQQIYSWERLCKVKWDHVIVI*THLHCF Trigger: GAAACAATGGAGATGAGTCAAGATTACTATGACATG...ATCCCATTTCACCTTGCAAAGCCTTTCCCAACTGTAAATTTGCTGAGAAATGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223451.2 |
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CDS TCA 90 bp | TTTGCATCAGTAGTCTCTGACTGTGACTCAAATTCTAGTCTCTCTTaGAAATCTTCCAACTGTCTGTTGCATTCAGATGTTGATGTTAAA | + |
Preference number: 5 (lower is better) Translates to: FASVVSDCDSNSSLS*KSSNCLLHSDVDVK Trigger: TTTAACATCAACATCTGAATGCAACAGACAGTTGGAAGATTTTCAAGAGAGACTAGAATTTGAGTCACAGTCAGAGACTACTGATGCAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021399.9 |
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CDS GCA 72 bp | CCCGCCCCGTTACTCCTGGCAACCGCCTGCCCGCCATaGCCAGCGCCCGCCGACGCGGGCCTCACCCGGATC | + |
Preference number: 6 (lower is better) Translates to: PAPLLLATACPP*PAPADAGLTRI Trigger: GATCCGGGTGAGGCCCGCGTCGGCGGGCGCTGGGCATGGCGGGCAGGCGGTTGCCAGGAGTAACGGGGCGGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223083.2 |
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CDS GCA 72 bp | GTGGCTCACACAACCGTCCTGCTTCGGATACCTGGCTaGTTTGTACATCCAGCTGCTTGGCAGCGTGAGCAC | + |
Preference number: 6 (lower is better) Translates to: VAHTTVLLRIPG*FVHPAAWQREH Trigger: GTGCTCACGCTGCCAAGCAGCTGGATGTACAAAGCAGCCAGGTATCCGAAGCAGGACGGTTGTGTGAGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS GCA 72 bp | GAACTAGAAACAGCAAGGGGAGGGACGGCAGCTTCGTaGCTTCTCTCATCTCCCCGACTGAAACTGCTCTTG | + |
Preference number: 6 (lower is better) Translates to: ELETARGGTAAS*LLSSPRLKLLL Trigger: CAAGAGCAGTTTCAGTCGGGGAGATGAGAGAAGGCACGAAGCTGCCGTCCCTCCCCTTGCTGTTTCTAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 ENSMUST00000223083.2 |
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CDS GCA 72 bp | TACGCTGCTAAGCACTGGTGGCTCACACAACCGTCCTaGTTCGGATACCTGGCTGCTTTGTACATCCAGCTG | + |
Preference number: 6 (lower is better) Translates to: YAAKHWWLTQPS*FGYLAALYIQL Trigger: CAGCTGGATGTACAAAGCAGCCAGGTATCCGAAGCAGGACGGTTGTGTGAGCCACCAGTGCTTAGCAGCGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS GCA 72 bp | TCTGGGTCCTCAAGCTGCCTGCTCAGCAAATGCAACTaGTGTGGGTGGAGGAGACCTCTGAGTCCCTTGTTT | + |
Preference number: 6 (lower is better) Translates to: SGSSSCLLSKCN*CGWRRPLSPLF Trigger: AAACAAGGGACTCAGAGGTCTCCTCCACCCACAGCAGTTGCATTTGCTGAGCAGGCAGCTTGAGGACCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
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CDS TCA 72 bp | GTAACGGCAGAGCTGGCCATTAGAAGACGGTGCTGGTaGCGACACTGGTTTTGGAGTCAGTATCGAGGCTCT | + |
Preference number: 6 (lower is better) Translates to: VTAELAIRRRCW*RHWFWSQYRGS Trigger: AGAGCCTCGATACTGACTCCAAAACCAGTGTCGTCACCAGCACCGTCTTCTAATGGCCAGCTCTGCCGTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021399.9 ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 ENSMUST00000220660.2 |
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CDS TCA 72 bp | GGACGGCAGCTTCGTGCCTTCTCTCATCTCCCCGACTaGAACTGCTCTTGTTTGAAGGCACGTGACTATCGA | + |
Preference number: 6 (lower is better) Translates to: GRQLRAFSHLPD*NCSCLKARDYR Trigger: TCGATAGTCACGTGCCTTCAAACAAGAGCAGTTTCAGTCGGGGAGATGAGAGAAGGCACGAAGCTGCCGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 ENSMUST00000223083.2 |
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CDS TCA 72 bp | CCTTCTCTCATCTCCCCGACTGAAACTGCTCTTGTTTaGAGGCACGTGACTATCGAAGATGCTGGCGTCAGG | + |
Preference number: 6 (lower is better) Translates to: PSLISPTETALV*RHVTIEDAGVR Trigger: CCTGACGCCAGCATCTTCGATAGTCACGTGCCTTCAAACAAGAGCAGTTTCAGTCGGGGAGATGAGAGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 ENSMUST00000223083.2 |
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CDS CAA 72 bp | CGAAGGGCATCTGCAGTCTTCATCCCCGAATCCTGGTaGGGTGTCACTACTATTTCCTCAGACAGCTTTGGC | + |
Preference number: 6 (lower is better) Translates to: RRASAVFIPESW*GVTTISSDSFG Trigger: GCCAAAGCTGTCTGAGGAAATAGTAGTGACACCCAACCAGGATTCGGGGATGAAGACTGCAGATGCCCTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110105.10 ENSMUST00000223451.2 |
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CDS CAA 90 bp | GAAAGGACCCGAAGGGCATCTGCAGTCTTCATCCCCGAATCCTGGTaGGGTGTCACTACTATTTCCTCAGACAGCTTTGGCTTCTTCAGA | + |
Preference number: 6 (lower is better) Translates to: ERTRRASAVFIPESW*GVTTISSDSFGFFR Trigger: TCTGAAGAAGCCAAAGCTGTCTGAGGAAATAGTAGTGACACCCAACCAGGATTCGGGGATGAAGACTGCAGATGCCCTTCGGGTCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110105.10 ENSMUST00000223451.2 |
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CDS TCA 72 bp | TGGTTGTACAAGATCTCGTGTCTGCATAAGGTGTCCTaGAAGGACCCGAAGGGCATCTGCAGTCTTCATCCC | + |
Preference number: 6 (lower is better) Translates to: WLYKISCLHKVS*KDPKGICSLHP Trigger: GGGATGAAGACTGCAGATGCCCTTCGGGTCCTTTCAGGACACCTTATGCAGACACGAGATCTTGTACAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
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CDS GCA 72 bp | TGCTTTGTACATCCAGCTGCTTGGCAGCGTGAGCACTaGTTTGCTGCGGATGAAGTTGCAGCCTGTTTAAGT | + |
Preference number: 6 (lower is better) Translates to: CFVHPAAWQREH*FAADEVAACLS Trigger: ACTTAAACAGGCTGCAACTTCATCCGCAGCAAAGCAGTGCTCACGCTGCCAAGCAGCTGGATGTACAAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS GCA 72 bp | AGGGAAGTAACGGCAGAGCTGGCCATTAGAAGACGGTaGTGGTTTTGGAGTCAGTATCGAGGCTCTTCTACT | + |
Preference number: 6 (lower is better) Translates to: REVTAELAIRRR*WFWSQYRGSST Trigger: AGTAGAAGAGCCTCGATACTGACTCCAAAACCAGCACCGTCTTCTAATGGCCAGCTCTGCCGTTACTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221532.2 |
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CDS CCA 72 bp | GAAGGGCATCTGCAGTCTTCATCCCCGAATCCTGGTTaGGTGTCACTACTATTTCCTCAGACAGCTTTGGCT | + |
Preference number: 6 (lower is better) Translates to: EGHLQSSSPNPG*VSLLFPQTALA Trigger: AGCCAAAGCTGTCTGAGGAAATAGTAGTGACACCCAACCAGGATTCGGGGATGAAGACTGCAGATGCCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110105.10 ENSMUST00000223451.2 |
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CDS CCA 72 bp | ACCCGAAGGGCATCTGCAGTCTTCATCCCCGAATCCTaGTTGGGTGTCACTACTATTTCCTCAGACAGCTTT | + |
Preference number: 6 (lower is better) Translates to: TRRASAVFIPES*LGVTTISSDSF Trigger: AAAGCTGTCTGAGGAAATAGTAGTGACACCCAACCAGGATTCGGGGATGAAGACTGCAGATGCCCTTCGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110105.10 ENSMUST00000223451.2 |
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CDS CAA 72 bp | CTTCAGAGGGTGCTGGTTCCCTCAGAGGTTTCACTGTaGACATTAGCCGGGTGGAAGCTCCATCATCATATG | + |
Preference number: 6 (lower is better) Translates to: LQRVLVPSEVSL*TLAGWKLHHHM Trigger: CATATGATGATGGAGCTTCCACCCGGCTAATGTCAACAGTGAAACCTCTGAGGGAACCAGCACCCTCTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 |
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CDS GCA 72 bp | GTACTTGCAGCGCTCCAGAAGTTTTTCTGGTTTCTGTaGCACACTCAGGTCAGTCATCTCGGCTTGACTCAT | + |
Preference number: 6 (lower is better) Translates to: VLAALQKFFWFL*HTQVSHLGLTH Trigger: ATGAGTCAAGCCGAGATGACTGACCTGAGTGTGGCACAGAAACCAGAAAAACTTCTGGAGCGCTGCAAGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021399.9 ENSMUST00000110104.10 ENSMUST00000221532.2 |
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CDS GCA 72 bp | GTACTTGCAGCGCTCCAGAAGTTTTTCTGGTTTCTGTaGCACACTCAGGTCAGTCATCTCGGCGTTGGAAAA | + |
Preference number: 6 (lower is better) Translates to: VLAALQKFFWFL*HTQVSHLGVGK Trigger: TTTTCCAACGCCGAGATGACTGACCTGAGTGTGGCACAGAAACCAGAAAAACTTCTGGAGCGCTGCAAGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
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CDS CCA 72 bp | GAAGTAACGGCAGAGCTGGCCATTAGAAGACGGTGCTaGTTTTGGAGTCAGTATCGAGGCTCTTCTACTCAT | + |
Preference number: 6 (lower is better) Translates to: EVTAELAIRRRC*FWSQYRGSSTH Trigger: ATGAGTAGAAGAGCCTCGATACTGACTCCAAAACCAGCACCGTCTTCTAATGGCCAGCTCTGCCGTTACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221532.2 |
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CDS CAA 72 bp | TGCAACTGCTGTGGGTGGAGGAGACCTCTGAGTCCCTaGTTTGAGGCTGAAGTTTGGTTTACGGGTTTCATT | + |
Preference number: 6 (lower is better) Translates to: CNCCGWRRPLSP*FEAEVWFTGFI Trigger: AATGAAACCCGTAAACCAAACTTCAGCCTCAAACAAGGGACTCAGAGGTCTCCTCCACCCACAGCAGTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
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CDS GCA 72 bp | GTACTTGCAGCGCTCCAGAAGTTTTTCTGGTTTCTGTaGCACACTCAGGTCAGTCATCTCGGCTTGACTTTT | + |
Preference number: 6 (lower is better) Translates to: VLAALQKFFWFL*HTQVSHLGLTF Trigger: AAAAGTCAAGCCGAGATGACTGACCTGAGTGTGGCACAGAAACCAGAAAAACTTCTGGAGCGCTGCAAGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057000.17 |
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CDS GCA 72 bp | GGGGACACCATCCAGCGTCACTATAAACTTGGGACTTaGAGGTTTATCTGGTTGTACAAGATCTCGTGTCTG | + |
Preference number: 6 (lower is better) Translates to: GDTIQRHYKLGT*RFIWLYKISCL Trigger: CAGACACGAGATCTTGTACAACCAGATAAACCTGCAAGTCCCAAGTTTATAGTGACGCTGGATGGTGTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
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CDS TCA 72 bp | GGTTTCTGTGCCACACTCAGGTCAGTCATCTCGGCTTaGCTCATCTCCATTGTTTCTACCATTACTGGATCA | + |
Preference number: 6 (lower is better) Translates to: GFCATLRSVISA*LISIVSTITGS Trigger: TGATCCAGTAATGGTAGAAACAATGGAGATGAGTCAAGCCGAGATGACTGACCTGAGTGTGGCACAGAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021399.9 ENSMUST00000110104.10 ENSMUST00000221532.2 |
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CDS TCA 72 bp | TTTTGCCCCTGGACCATTTCTGCTAGCAATTCTTCTTaGGAAGTTCGAGTTCTGGGAGCAACTGGAAGTGTC | + |
Preference number: 6 (lower is better) Translates to: FCPWTISASNSS*EVRVLGATGSV Trigger: GACACTTCCAGTTGCTCCCAGAACTCGAACTTCTCAAGAAGAATTGCTAGCAGAAATGGTCCAGGGGCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 ENSMUST00000221532.2 ENSMUST00000223451.2 |
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CDS CAA 72 bp | CACTCAGGTCAGTCATCTCGGCTTGACTCATCTCCATaGTTTCTACCATTACTGGATCAATTTGCAGTCGGG | + |
Preference number: 6 (lower is better) Translates to: HSGQSSRLDSSP*FLPLLDQFAVG Trigger: CCCGACTGCAAATTGATCCAGTAATGGTAGAAACAATGGAGATGAGTCAAGCCGAGATGACTGACCTGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021399.9 ENSMUST00000110104.10 ENSMUST00000221532.2 |
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CDS CAA 90 bp | AAAGGTAGGAAATATTGCCCAGCTCATTTAGTGAACAAGAAGCACTaGTCAGAGAGCCTAAGTCAGCTGGCTCTGGTGAGAGGAAAACTG | + |
Preference number: 6 (lower is better) Translates to: KGRKYCPAHLVNKKH*SESLSQLALVRGKL Trigger: CAGTTTTCCTCTCACCAGAGCCAGCTGACTTAGGCTCTCTGACAAGTGCTTCTTGTTCACTAAATGAGCTGGGCAATATTTCCTACCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021399.9 |
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CDS CCA 72 bp | CAGCGTCACTATAAACTTGGGACTTGCAGGTTTATCTaGTTGTACAAGATCTCGTGTCTGCATAAGGTGTCC | + |
Preference number: 6 (lower is better) Translates to: QRHYKLGTCRFI*LYKISCLHKVS Trigger: GGACACCTTATGCAGACACGAGATCTTGTACAACCAGATAAACCTGCAAGTCCCAAGTTTATAGTGACGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110105.10 |
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CDS CAA 72 bp | AATACACCATGGAGCCATACGGTGAATCGAATTGTGTaGTTCCCTAGAAACAGGGACAGGTCCTCTGTCATT | + |
Preference number: 6 (lower is better) Translates to: NTPWSHTVNRIV*FPRNRDRSSVI Trigger: AATGACAGAGGACCTGTCCCTGTTTCTAGGGAACAACACAATTCGATTCACCGTATGGCTCCATGGTGTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 ENSMUST00000223083.2 |
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CDS CCA 72 bp | TTTCTGCTAGCAATTCTTCTTGAGAAGTTCGAGTTCTaGGAGCAACTGGAAGTGTCTGTTTCTGTGGAACTG | + |
Preference number: 6 (lower is better) Translates to: FLLAILLEKFEF*EQLEVSVSVEL Trigger: CAGTTCCACAGAAACAGACACTTCCAGTTGCTCCCAGAACTCGAACTTCTCAAGAAGAATTGCTAGCAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000057000.17 ENSMUST00000110104.10 ENSMUST00000110105.10 ENSMUST00000221532.2 ENSMUST00000223451.2 |
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CDS TCA 72 bp | GGATCAATTTGCAGTCGGGATAACAATTGCCTCTGTTaGGTTCCTTTCTCAACCTCTGTTAGGAAGCCAATT | + |
Preference number: 6 (lower is better) Translates to: GSICSRDNNCLC*VPFSTSVRKPI Trigger: AATTGGCTTCCTAACAGAGGTTGAGAAAGGAACTCAACAGAGGCAATTGTTATCCCGACTGCAAATTGATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021399.9 |
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CDS CAA 72 bp | TGGATTCCATGTCATAGTAATCTTGACTCATCTCCATaGTTTCTACCATTACTGGATCAATTTGCAGTCGGG | + |
Preference number: 6 (lower is better) Translates to: WIPCHSNLDSSP*FLPLLDQFAVG Trigger: CCCGACTGCAAATTGATCCAGTAATGGTAGAAACAATGGAGATGAGTCAAGATTACTATGACATGGAATCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110105.10 ENSMUST00000223451.2 |