Pregenerated sensors for ZC3H12D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039981Ensembl transcript IDs: ENSMUST00000039484.6
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCTTCCAAACACAGCAGAAATCACCCTGTCCATGCAGCAGGTCCTaGCTTCAGGGAGCATCCCCAAGGTCCCCACGGGTATCCACCACT | + |
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Preference number: 1 (lower is better) Translates to: AFQTQQKSPCPCSRS*LQGASPRSPRVSTT Trigger: AGTGGTGGATACCCGTGGGGACCTTGGGGATGCTCCCTGAAGCCAGGACCTGCTGCATGGACAGGGTGATTTCTGCTGTGTTTGGAAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR GCA 90 bp | ATTCCCGACAAAGCCTTCCAAACACAGCAGAAATCACCCTGTCCATaGAGCAGGTCCTGGCTTCAGGGAGCATCCCCAAGGTCCCCACGG | + |
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Preference number: 1 (lower is better) Translates to: IPDKAFQTQQKSPCP*SRSWLQGASPRSPR Trigger: CCGTGGGGACCTTGGGGATGCTCCCTGAAGCCAGGACCTGCTGCATGGACAGGGTGATTTCTGCTGTGTTTGGAAGGCTTTGTCGGGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR CCA 90 bp | GTGTTTCCCAAATGTACCTATCACACTGCAGGGGCTCGGAGGCTTTaGCAAAGAGTTCCCACTGGCAGGTCCCTTCTGACTCTCTCTGAC | + |
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Preference number: 1 (lower is better) Translates to: VFPKCTYHTAGARRL*QRVPTGRSLLTLSD Trigger: GTCAGAGAGAGTCAGAAGGGACCTGCCAGTGGGAACTCTTTGCCAAAGCCTCCGAGCCCCTGCAGTGTGATAGGTACATTTGGGAAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR TCA 90 bp | GGAGGACTTCCAGGAAGCCATATGGCTGCCCTGGTACCAAGGAGTTaGGTTTACCATGAATACCGCAGCCGAGTTTTTCCTGAGGCATAC | + |
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Preference number: 1 (lower is better) Translates to: GGLPGSHMAALVPRS*VYHEYRSRVFPEAY Trigger: GTATGCCTCAGGAAAAACTCGGCTGCGGTATTCATGGTAAACTCAACTCCTTGGTACCAGGGCAGCCATATGGCTTCCTGGAAGTCCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR GCA 90 bp | TGTGGAAAGGAAACACACACAAACACACATGCACCCACACATACATaGACACACACATGCACAGGCACACACACGCACTCGAGGGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: CGKETHTNTHAPTHT*THTCTGTHTHSREK Trigger: TTTTTCCCTCGAGTGCGTGTGTGTGCCTGTGCATGTGTGTGTGCATGTATGTGTGGGTGCATGTGTGTTTGTGTGTGTTTCCTTTCCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR GCA 90 bp | CCTACTCTAACAGTCTTGTGGAAAGGAAACACACACAAACACACATaGACCCACACATACATGCACACACACATGCACAGGCACACACAC | + |
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Preference number: 1 (lower is better) Translates to: PTLTVLWKGNTHKHT*THTYMHTHMHRHTH Trigger: GTGTGTGTGCCTGTGCATGTGTGTGTGCATGTATGTGTGGGTGCATGTGTGTTTGTGTGTGTTTCCTTTCCACAAGACTGTTAGAGTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR CCA 90 bp | CCTCATGAACAAATGAGTTACAATCTGGCAGGCTACCATTGTAATTaGAACATATGGGTGCTGCCTACAGATGCTAGGGGTCCCTCAGGA | + |
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Preference number: 1 (lower is better) Translates to: PHEQMSYNLAGYHCN*NIWVLPTDARGPSG Trigger: TCCTGAGGGACCCCTAGCATCTGTAGGCAGCACCCATATGTTCCAATTACAATGGTAGCCTGCCAGATTGTAACTCATTTGTTCATGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR TCA 90 bp | GTGACTTGTAAACTCAGGCAGCAATGCCTTCCTTCTCGTGTCACCTaGACATGTATGTTAAACATCATTGGGCACCACAAAAGTCAAGAC | + |
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Preference number: 1 (lower is better) Translates to: VTCKLRQQCLPSRVT*TCMLNIIGHHKSQD Trigger: GTCTTGACTTTTGTGGTGCCCAATGATGTTTAACATACATGTTCAGGTGACACGAGAAGGAAGGCATTGCTGCCTGAGTTTACAAGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR CCA 90 bp | TGTCTCTCATCCACGGTTTTGTGTCACAAGGACATACTAAGACTTTaGAATTTTCCAAAGGTGATTACATCCGAGATGTGTTGTTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: CLSSTVLCHKDILRL*NFPKVITSEMCCCP Trigger: GGGACAACAACACATCTCGGATGTAATCACCTTTGGAAAATTCCAAAGTCTTAGTATGTCCTTGTGACACAAAACCGTGGATGAGAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR CCA 90 bp | ATGCCTTCCTTCTCGTGTCACCTGAACATGTATGTTAAACATCATTaGGCACCACAAAAGTCAAGACTGATTTACCAGCCTTTTTCAATC | + |
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Preference number: 1 (lower is better) Translates to: MPSFSCHLNMYVKHH*APQKSRLIYQPFSI Trigger: GATTGAAAAAGGCTGGTAAATCAGTCTTGACTTTTGTGGTGCCCAATGATGTTTAACATACATGTTCAGGTGACACGAGAAGGAAGGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR-3UTR CCA 90 bp | GGGGAGGCCCATCCCCCGCTGATCCATTCTTGGTGCCTGGAGTCAGCCTGTAGGGGGATCAGGTGTCCCTaGGACAGCCCCACAGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: GEAHPPLIHSWCLESACRGIRCP*DSPTVK Trigger: TTTTACTGTGGGGCTGTCCCAGGGACACCTGATCCC...CCTACAGGCTGACTCCAGGCACCAAGAATGGATCAGCGGGGGATGGGCCTCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR-3UTR TCA 90 bp | GGGGAGGCCCATCCCCCGCTGATCCATTCTTGGTGCCTGGAGTCAGCCTGTAGGTCCCTCATGAACAAATaGGTTACAATCTGGCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: GEAHPPLIHSWCLESACRSLMNK*VTIWQA Trigger: AGCCTGCCAGATTGTAACTCATTTGTTCATGAGGGA...CCTACAGGCTGACTCCAGGCACCAAGAATGGATCAGCGGGGGATGGGCCTCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR-3UTR GCA 90 bp | AACAGTTATGCAACTAGAGATAGCCCATCTATGTCTCTCATCCACGGTTTTGTGAGGAAGCCATATGGCTaGCCTGGTACCAAGGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: NSYATRDSPSMSLIHGFVRKPYG*PGTKEL Trigger: CAACTCCTTGGTACCAGGGCAGCCATATGGCTTCCT...CACAAAACCGTGGATGAGAGACATAGATGGGCTATCTCTAGTTGCATAACTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR CAA 90 bp | CAACATAGCCATCTAAGTCAGAAGGCTACACCTACTCTAACAGTCTaGTGGAAAGGAAACACACACAAACACACATGCACCCACACATAC | + |
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Preference number: 2 (lower is better) Translates to: QHSHLSQKATPTLTV*WKGNTHKHTCTHTY Trigger: GTATGTGTGGGTGCATGTGTGTTTGTGTGTGTTTCCTTTCCACAAGACTGTTAGAGTAGGTGTAGCCTTCTGACTTAGATGGCTATGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR-3UTR GCA 90 bp | AACAGTTATGCAACTAGAGATAGCCCATCTATGTCTCTCATCCACGGTTTTGTGTTAAGCAAGGCCGTGTaGATGTGTACATGTGCATGC | + |
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Preference number: 2 (lower is better) Translates to: NSYATRDSPSMSLIHGFVLSKAV*MCTCAC Trigger: GCATGCACATGTACACATGCACACGGCCTTGCTTAA...CACAAAACCGTGGATGAGAGACATAGATGGGCTATCTCTAGTTGCATAACTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR CAA 90 bp | ATGTCTCTCATCCACGGTTTTGTGTCACAAGGACATACTAAGACTTaGGAATTTTCCAAAGGTGATTACATCCGAGATGTGTTGTTGTCC | + |
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Preference number: 2 (lower is better) Translates to: MSLIHGFVSQGHTKT*EFSKGDYIRDVLLS Trigger: GGACAACAACACATCTCGGATGTAATCACCTTTGGAAAATTCCAAAGTCTTAGTATGTCCTTGTGACACAAAACCGTGGATGAGAGACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR CAA 90 bp | GTTATGCAACTAGAGATAGCCCATCTATGTCTCTCATCCACGGTTTaGTGTCACAAGGACATACTAAGACTTTGGAATTTTCCAAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: VMQLEIAHLCLSSTV*CHKDILRLWNFPKV Trigger: CACCTTTGGAAAATTCCAAAGTCTTAGTATGTCCTTGTGACACAAAACCGTGGATGAGAGACATAGATGGGCTATCTCTAGTTGCATAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR-3UTR TCA 90 bp | AACAGTTATGCAACTAGAGATAGCCCATCTATGTCTCTCATCCACGGTTTTGTGGGAATTTTCCAAAGGTaGTTACATCCGAGATGTGTT | + |
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Preference number: 2 (lower is better) Translates to: NSYATRDSPSMSLIHGFVGIFQR*LHPRCV Trigger: AACACATCTCGGATGTAATCACCTTTGGAAAATTCC...CACAAAACCGTGGATGAGAGACATAGATGGGCTATCTCTAGTTGCATAACTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR-3UTR TCA 90 bp | GAAAAGGTGGTTTATTTTTGGAGCATGGTAACAGTTATGCAACTAGAGATAGCCGGCTGGGTTCCCTTATaGGTGAAATTATCAATAGTG | + |
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Preference number: 2 (lower is better) Translates to: EKVVYFWSMVTVMQLEIAGWVPL*VKLSIV Trigger: CACTATTGATAATTTCACTCATAAGGGAACCCAGCC...GGCTATCTCTAGTTGCATAACTGTTACCATGCTCCAAAAATAAACCACCTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR-3UTR CCA 90 bp | CCCTCTTGTACTTTGCTTAATCACAGTGAACCAAATAAAATAGCTTTACAGCTTGGCTACCATTGTAATTaGAACATATGGGTGCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: PSCTLLNHSEPNKIALQLGYHCN*NIWVLP Trigger: AGGCAGCACCCATATGTTCCAATTACAATGGTAGCC...AAGCTGTAAAGCTATTTTATTTGGTTCACTGTGATTAAGCAAAGTACAAGAGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR-3UTR CCA 90 bp | CCCTCTTGTACTTTGCTTAATCACAGTGAACCAAATAAAATAGCTTTACAGCTTACTCTAACAGTCTTGTaGAAAGGAAACACACACAAA | + |
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Preference number: 2 (lower is better) Translates to: PSCTLLNHSEPNKIALQLTLTVL*KGNTHK Trigger: TTTGTGTGTGTTTCCTTTCCACAAGACTGTTAGAGT...AAGCTGTAAAGCTATTTTATTTGGTTCACTGTGATTAAGCAAAGTACAAGAGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR CCA 72 bp | GGGAGTGGGGAGGCCCATCCCCCGCTGATCCATTCTTaGTGCCTGGAGTCAGCCTGTAGGATAGGATATGTC | + |
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Preference number: 3 (lower is better) Translates to: GSGEAHPPLIHS*CLESACRIGYV Trigger: GACATATCCTATCCTACAGGCTGACTCCAGGCACCAAGAATGGATCAGCGGGGGATGGGCCTCCCCACTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR GCA 72 bp | AAAGCCTTCCAAACACAGCAGAAATCACCCTGTCCATaGAGCAGGTCCTGGCTTCAGGGAGCATCCCCAAGG | + |
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Preference number: 3 (lower is better) Translates to: KAFQTQQKSPCP*SRSWLQGASPR Trigger: CCTTGGGGATGCTCCCTGAAGCCAGGACCTGCTGCATGGACAGGGTGATTTCTGCTGTGTTTGGAAGGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR CCA 72 bp | AAATGTACCTATCACACTGCAGGGGCTCGGAGGCTTTaGCAAAGAGTTCCCACTGGCAGGTCCCTTCTGACT | + |
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Preference number: 3 (lower is better) Translates to: KCTYHTAGARRL*QRVPTGRSLLT Trigger: AGTCAGAAGGGACCTGCCAGTGGGAACTCTTTGCCAAAGCCTCCGAGCCCCTGCAGTGTGATAGGTACATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR TCA 72 bp | CCAGGAAGCCATATGGCTGCCCTGGTACCAAGGAGTTaGGTTTACCATGAATACCGCAGCCGAGTTTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: PGSHMAALVPRS*VYHEYRSRVFP Trigger: AGGAAAAACTCGGCTGCGGTATTCATGGTAAACTCAACTCCTTGGTACCAGGGCAGCCATATGGCTTCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR CCA 72 bp | AAGAGGGAGGACTTCCAGGAAGCCATATGGCTGCCCTaGTACCAAGGAGTTGAGTTTACCATGAATACCGCA | + |
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Preference number: 3 (lower is better) Translates to: KREDFQEAIWLP*YQGVEFTMNTA Trigger: TGCGGTATTCATGGTAAACTCAACTCCTTGGTACCAGGGCAGCCATATGGCTTCCTGGAAGTCCTCCCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR TCA 72 bp | ATATGGTATGCATGTACAAAAAGAATAAAGCCCCAGTaGGAAGACCCTTGGGATCAGGTGTCCCTGGGACAG | + |
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Preference number: 3 (lower is better) Translates to: IWYACTKRIKPQ*EDPWDQVSLGQ Trigger: CTGTCCCAGGGACACCTGATCCCAAGGGTCTTCTCACTGGGGCTTTATTCTTTTTGTACATGCATACCATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR GCA 72 bp | ACAGTCTTGTGGAAAGGAAACACACACAAACACACATaGACCCACACATACATGCACACACACATGCACAGG | + |
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Preference number: 3 (lower is better) Translates to: TVLWKGNTHKHT*THTYMHTHMHR Trigger: CCTGTGCATGTGTGTGTGCATGTATGTGTGGGTGCATGTGTGTTTGTGTGTGTTTCCTTTCCACAAGACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR CCA 72 bp | CTAAGTCAGAAGGCTACACCTACTCTAACAGTCTTGTaGAAAGGAAACACACACAAACACACATGCACCCAC | + |
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Preference number: 3 (lower is better) Translates to: LSQKATPTLTVL*KGNTHKHTCTH Trigger: GTGGGTGCATGTGTGTTTGTGTGTGTTTCCTTTCCACAAGACTGTTAGAGTAGGTGTAGCCTTCTGACTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR-3UTR CAA 90 bp | AACAGTTATGCAACTAGAGATAGCCCATCTATGTCTCTCATCCACGGTTTTGTGCCTACTCTAACAGTCTaGTGGAAAGGAAACACACAC | + |
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Preference number: 3 (lower is better) Translates to: NSYATRDSPSMSLIHGFVPTLTV*WKGNTH Trigger: GTGTGTGTTTCCTTTCCACAAGACTGTTAGAGTAGG...CACAAAACCGTGGATGAGAGACATAGATGGGCTATCTCTAGTTGCATAACTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR CCA 72 bp | TTCTCGTGTCACCTGAACATGTATGTTAAACATCATTaGGCACCACAAAAGTCAAGACTGATTTACCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: FSCHLNMYVKHH*APQKSRLIYQP Trigger: AGGCTGGTAAATCAGTCTTGACTTTTGTGGTGCCCAATGATGTTTAACATACATGTTCAGGTGACACGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR CCA 72 bp | TCCACGGTTTTGTGTCACAAGGACATACTAAGACTTTaGAATTTTCCAAAGGTGATTACATCCGAGATGTGT | + |
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Preference number: 3 (lower is better) Translates to: STVLCHKDILRL*NFPKVITSEMC Trigger: ACACATCTCGGATGTAATCACCTTTGGAAAATTCCAAAGTCTTAGTATGTCCTTGTGACACAAAACCGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR-3UTR CAA 90 bp | CCCTCTTGTACTTTGCTTAATCACAGTGAACCAAATAAAATAGCTTTACAGCTTTATATCAAACTCAGCTaGATCTCCTTGATTAGCGGT | + |
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Preference number: 3 (lower is better) Translates to: PSCTLLNHSEPNKIALQLYIKLS*ISLISG Trigger: ACCGCTAATCAAGGAGATCAAGCTGAGTTTGATATA...AAGCTGTAAAGCTATTTTATTTGGTTCACTGTGATTAAGCAAAGTACAAGAGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR TCA 72 bp | ATGTTAAACATCATTGGGCACCACAAAAGTCAAGACTaGTTTACCAGCCTTTTTCAATCTTTCAACTACAAT | + |
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Preference number: 3 (lower is better) Translates to: MLNIIGHHKSQD*FTSLFQSFNYN Trigger: ATTGTAGTTGAAAGATTGAAAAAGGCTGGTAAATCAGTCTTGACTTTTGTGGTGCCCAATGATGTTTAACAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR GCA 72 bp | AATAAAATAGCTTTACAGCTTACTAAAACTCAAACTTaGCTTCAGAGGAGCAGTTTAAACGTTCCCAACTAT | + |
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Preference number: 3 (lower is better) Translates to: NKIALQLTKTQT*LQRSSLNVPNY Trigger: ATAGTTGGGAACGTTTAAACTGCTCCTCTGAAGGCAAGTTTGAGTTTTAGTAAGCTGTAAAGCTATTTTATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR CCA 90 bp | GGGGAGGCCCATCCCCCGCTGATCCATTCTTGGTGCCTGGAGTCAGCCTGTAGGCTACCCCGGTGCCACTaGCTGGATCCTCCTGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: GEAHPPLIHSWCLESACRLPRCH*LDPPGP Trigger: GGGCCCAGGAGGATCCAGCCAGTGGCACCGGGGTAG...CCTACAGGCTGACTCCAGGCACCAAGAATGGATCAGCGGGGGATGGGCCTCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR CCA 90 bp | CGTCTTGTATCCCACCCGTCCAAGCTGCCAGTCAAGCCTGGGCCACCACCCCTTTGCTCGCCGGGCTCCTaGGGAAGCAGCCGGGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: RLVSHPSKLPVKPGPPPLCSPGS*GSSRAV Trigger: AACAGCCCGGCTGCTTCCCCAGGAGCCCGGCGAGCA...AAGGGGTGGTGGCCCAGGCTTGACTGGCAGCTTGGACGGGTGGGATACAAGACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR CCA 90 bp | GTGCTGCCTACAGATGCTAGGGGTCCCTCAGGATGCTGGGCCCATGCCCCGAAAACGTGGGGACACCCGTaGGCATCCAGTCCGGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: VLPTDARGPSGCWAHAPKTWGHP*ASSPAH Trigger: GTGGGCCGGACTGGATGCCCACGGGTGTCCCCACGT...TTTCGGGGCATGGGCCCAGCATCCTGAGGGACCCCTAGCATCTGTAGGCAGCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR GCA 90 bp | GGGGAGGCCCATCCCCCGCTGATCCATTCTTGGTGCCTGGAGTCAGCCTGTAGGGCTCCTATTCAAAGCTaGCAGGACCGCGGGCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: GEAHPPLIHSWCLESACRAPIQS*QDRGLR Trigger: CCGCAGCCCGCGGTCCTGGCAGCTTTGAATAGGAGC...CCTACAGGCTGACTCCAGGCACCAAGAATGGATCAGCGGGGGATGGGCCTCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR CCA 90 bp | GTCCATGCAGCAGGTCCTGGCTTCAGGGAGCATCCCCAAGGTCCCCACGGGTATCTGGCAACCCTATGGTaGCAGCGCTGCCCGCGCGAA | + |
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Preference number: 4 (lower is better) Translates to: VHAAGPGFREHPQGPHGYLATLW*QRCPRE Trigger: TTCGCGCGGGCAGCGCTGCCACCATAGGGTTGCCAG...ATACCCGTGGGGACCTTGGGGATGCTCCCTGAAGCCAGGACCTGCTGCATGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR CCA 90 bp | GTGCTGCCTACAGATGCTAGGGGTCCCTCAGGATGCTGGGCCCATGCCCCGAAAGGCCTGTGGGCAGATTaGAGACCCGAGATCGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: VLPTDARGPSGCWAHAPKGLWAD*RPEIAR Trigger: CCGGGCGATCTCGGGTCTCCAATCTGCCCACAGGCC...TTTCGGGGCATGGGCCCAGCATCCTGAGGGACCCCTAGCATCTGTAGGCAGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR GCA 90 bp | GGGGAGGCCCATCCCCCGCTGATCCATTCTTGGTGCCTGGAGTCAGCCTGTAGGAGCAGACCACTCGCTTaGCGTTCACCTTGCGGGATG | + |
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Preference number: 4 (lower is better) Translates to: GEAHPPLIHSWCLESACRSRPLA*RSPCGM Trigger: CATCCCGCAAGGTGAACGGCAAGCGAGTGGTCTGCT...CCTACAGGCTGACTCCAGGCACCAAGAATGGATCAGCGGGGGATGGGCCTCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR GCA 90 bp | GTGCTGCCTACAGATGCTAGGGGTCCCTCAGGATGCTGGGCCCATGCCCCGAAATCGGCCACAGACAGCTaGCCATGGTGTGGTCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: VLPTDARGPSGCWAHAPKSATDS*PWCGLS Trigger: CGAGAGACCACACCATGGGCAGCTGTCTGTGGCCGA...TTTCGGGGCATGGGCCCAGCATCCTGAGGGACCCCTAGCATCTGTAGGCAGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR GCA 90 bp | GGGGAGGCCCATCCCCCGCTGATCCATTCTTGGTGCCTGGAGTCAGCCTGTAGGGTCTTTTGGGATCTCTaGAGGAGGGTGAGCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: GEAHPPLIHSWCLESACRVFWDL*RRVSRA Trigger: GGCTCTGCTCACCCTCCTGCAGAGATCCCAAAAGAC...CCTACAGGCTGACTCCAGGCACCAAGAATGGATCAGCGGGGGATGGGCCTCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR CCA 90 bp | GTCCATGCAGCAGGTCCTGGCTTCAGGGAGCATCCCCAAGGTCCCCACGGGTATACAGTGTTGCCAGGATaGCTCTGGGGGCCTTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: VHAAGPGFREHPQGPHGYTVLPG*LWGPWL Trigger: AAGCCAAGGCCCCCAGAGCCATCCTGGCAACACTGT...ATACCCGTGGGGACCTTGGGGATGCTCCCTGAAGCCAGGACCTGCTGCATGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR CCA 90 bp | GTCCATGCAGCAGGTCCTGGCTTCAGGGAGCATCCCCAAGGTCCCCACGGGTATCACTGTGCATGTCCCTaGAACGGTGTCTCTCCGACA | + |
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Preference number: 4 (lower is better) Translates to: VHAAGPGFREHPQGPHGYHCACP*NGVSPT Trigger: TGTCGGAGAGACACCGTTCCAGGGACATGCACAGTG...ATACCCGTGGGGACCTTGGGGATGCTCCCTGAAGCCAGGACCTGCTGCATGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR GCA 90 bp | GCCTTCCAAACACAGCAGAAATCACCCTGTCCATGCAGCAGGTCCTGGCTTCAGGGGAAGAAGCTGCAGTaGACAGGGCGTGTTCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: AFQTQQKSPCPCSRSWLQGKKLQ*TGRVPP Trigger: TGGGGGAACACGCCCTGTGCACTGCAGCTTCTTCCC...CTGAAGCCAGGACCTGCTGCATGGACAGGGTGATTTCTGCTGTGTTTGGAAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR TCA 90 bp | GTGCTGCCTACAGATGCTAGGGGTCCCTCAGGATGCTGGGCCCATGCCCCGAAAGGTCATCAGGAGGCATaGACCTGTCATTTACAAAGG | + |
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Preference number: 4 (lower is better) Translates to: VLPTDARGPSGCWAHAPKGHQEA*TCHLQR Trigger: CCTTTGTAAATGACAGGTTCATGCCTCCTGATGACC...TTTCGGGGCATGGGCCCAGCATCCTGAGGGACCCCTAGCATCTGTAGGCAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR GCA 90 bp | GCCTTCCAAACACAGCAGAAATCACCCTGTCCATGCAGCAGGTCCTGGCTTCAGGGAGGCAGGTCACTGTaGATGTCCCTGGAACGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AFQTQQKSPCPCSRSWLQGGRSL*MSLERC Trigger: ACACCGTTCCAGGGACATGCACAGTGACCTGCCTCC...CTGAAGCCAGGACCTGCTGCATGGACAGGGTGATTTCTGCTGTGTTTGGAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR CCA 90 bp | GAAGACCCTTGGGATCAGGTGTCCCTGGGACAGCCCCACAGTAAAATTTACACAGTGGTCTTGGTCAGGTaGGAAGAAGCTGCAGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EDPWDQVSLGQPHSKIYTVVLVR*EEAAVH Trigger: GTGCACTGCAGCTTCTTCCCACCTGACCAAGACCAC...TGTGTAAATTTTACTGTGGGGCTGTCCCAGGGACACCTGATCCCAAGGGTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR CCA 90 bp | ATGTATGTTAAACATCATTGGGCACCACAAAAGTCAAGACTGATTTACCAGCCTGTGGGGCCCAGGACGTaGGGACACCCGTGGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: MYVKHHWAPQKSRLIYQPVGPRT*GHPWAS Trigger: GGATGCCCACGGGTGTCCCCACGTCCTGGGCCCCAC...AGGCTGGTAAATCAGTCTTGACTTTTGTGGTGCCCAATGATGTTTAACATACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR TCA 90 bp | GCCTTCCAAACACAGCAGAAATCACCCTGTCCATGCAGCAGGTCCTGGCTTCAGATGGGACAAAAACCTTaGTGTAGGTGTGTCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AFQTQQKSPCPCSRSWLQMGQKP*CRCVLC Trigger: ACAGAGGACACACCTACATCAAGGTTTTTGTCCCAT...CTGAAGCCAGGACCTGCTGCATGGACAGGGTGATTTCTGCTGTGTTTGGAAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR CCA 90 bp | GTTAAGTTCTCATGGCTTTCTAGAATTCTAAACACACACACACACACACACACACTGGCTGGATCCTCCTaGGCCCTTGGGCGACTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VKFSWLSRILNTHTHTHTLAGSS*ALGRLP Trigger: CGGCAGTCGCCCAAGGGCCCAGGAGGATCCAGCCAG...TGTGTGTGTGTGTGTGTGTGTGTTTAGAATTCTAGAAAGCCATGAGAACTTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR TCA 90 bp | TCGTGTCACCTGAACATGTATGTTAAACATCATTGGGCACCACAAAAGTCAAGAGTTTGCCCAGCACCCTaGCCACGTCCTCCTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SCHLNMYVKHHWAPQKSRVCPAP*PRPPGC Trigger: ACAGCCAGGAGGACGTGGTCAGGGTGCTGGGCAAAC...TCTTGACTTTTGTGGTGCCCAATGATGTTTAACATACATGTTCAGGTGACACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR GCA 90 bp | ATGTATGTTAAACATCATTGGGCACCACAAAAGTCAAGACTGATTTACCAGCCTCTATGGTGGCAGCGCTaGCCGCGCGAAGGGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: MYVKHHWAPQKSRLIYQPLWWQR*PREGMV Trigger: CACCATCCCTTCGCGCGGGCAGCGCTGCCACCATAG...AGGCTGGTAAATCAGTCTTGACTTTTGTGGTGCCCAATGATGTTTAACATACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR GCA 90 bp | TCGTGTCACCTGAACATGTATGTTAAACATCATTGGGCACCACAAAAGTCAAGAGATCTTCCAGCGGTCTaGGCTGGGGAGGCAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SCHLNMYVKHHWAPQKSRDLPAV*AGEAGH Trigger: GTGACCTGCCTCCCCAGCGCAGACCGCTGGAAGATC...TCTTGACTTTTGTGGTGCCCAATGATGTTTAACATACATGTTCAGGTGACACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
||
| CDS-3UTR CCA 90 bp | ATGTATGTTAAACATCATTGGGCACCACAAAAGTCAAGACTGATTTACCAGCCTTGCTGGGCAGAGTCTTaGACCCCGCAGCATCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: MYVKHHWAPQKSRLIYQPCWAES*TPQHPR Trigger: CCGGGGATGCTGCGGGGTCCAAGACTCTGCCCAGCA...AGGCTGGTAAATCAGTCTTGACTTTTGTGGTGCCCAATGATGTTTAACATACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR CCA 90 bp | GAAGACCCTTGGGATCAGGTGTCCCTGGGACAGCCCCACAGTAAAATTTACACAGAACCATTTCCACTCTaGGTTTTCGTTCTGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EDPWDQVSLGQPHSKIYTEPFPL*VFVLQV Trigger: GACCTGCAGAACGAAAACCCAGAGTGGAAATGGTTC...TGTGTAAATTTTACTGTGGGGCTGTCCCAGGGACACCTGATCCCAAGGGTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR GCA 90 bp | TCGTGTCACCTGAACATGTATGTTAAACATCATTGGGCACCACAAAAGTCAAGATCAGCACTACCCCGGTaGCACTGGCTGGATCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SCHLNMYVKHHWAPQKSRSALPR*HWLDPP Trigger: AGGAGGATCCAGCCAGTGGCACCGGGGTAGTGCTGA...TCTTGACTTTTGTGGTGCCCAATGATGTTTAACATACATGTTCAGGTGACACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR CCA 90 bp | CCCTCTTGTACTTTGCTTAATCACAGTGAACCAAATAAAATAGCTTTACAGCTTGGTCCCAGGCCCTGCTaGGCAGAGTCTTGGACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PSCTLLNHSEPNKIALQLGPRPC*AESWTP Trigger: CGGGGTCCAAGACTCTGCCCAGCAGGGCCTGGGACC...AAGCTGTAAAGCTATTTTATTTGGTTCACTGTGATTAAGCAAAGTACAAGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR CCA 90 bp | GAAGACCCTTGGGATCAGGTGTCCCTGGGACAGCCCCACAGTAAAATTTACACACTCTTTCCTCCAAGATaGGACAAAAACCTTGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: EDPWDQVSLGQPHSKIYTLFPPR*DKNLDV Trigger: TACATCAAGGTTTTTGTCCCATCTTGGAGGAAAGAG...TGTGTAAATTTTACTGTGGGGCTGTCCCAGGGACACCTGATCCCAAGGGTCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR GCA 90 bp | ATGTATGTTAAACATCATTGGGCACCACAAAAGTCAAGACTGATTTACCAGCCTGCTTGCCGTTCACCTTaGGGGATGGGGTATACACCA | + |
|
Preference number: 4 (lower is better) Translates to: MYVKHHWAPQKSRLIYQPACRSP*GMGYTP Trigger: TGGTGTATACCCCATCCCGCAAGGTGAACGGCAAGC...AGGCTGGTAAATCAGTCTTGACTTTTGTGGTGCCCAATGATGTTTAACATACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR CCA 90 bp | CCCTCTTGTACTTTGCTTAATCACAGTGAACCAAATAAAATAGCTTTACAGCTTTTGCCAGGATGGCTCTaGGGGCCTTGGCTTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSCTLLNHSEPNKIALQLLPGWL*GPWLLA Trigger: AGCAAGAAGCCAAGGCCCCCAGAGCCATCCTGGCAA...AAGCTGTAAAGCTATTTTATTTGGTTCACTGTGATTAAGCAAAGTACAAGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR CAA 72 bp | CATCTAAGTCAGAAGGCTACACCTACTCTAACAGTCTaGTGGAAAGGAAACACACACAAACACACATGCACC | + |
|
Preference number: 4 (lower is better) Translates to: HLSQKATPTLTV*WKGNTHKHTCT Trigger: GGTGCATGTGTGTTTGTGTGTGTTTCCTTTCCACAAGACTGTTAGAGTAGGTGTAGCCTTCTGACTTAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
||
| CDS-3UTR TCA 90 bp | ATGTATGTTAAACATCATTGGGCACCACAAAAGTCAAGACTGATTTACCAGCCTAGGAGTATCAGACCTTaGTGGCTCTTTCCTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: MYVKHHWAPQKSRLIYQPRSIRP*WLFPPR Trigger: TCTTGGAGGAAAGAGCCATCAAGGTCTGATACTCCT...AGGCTGGTAAATCAGTCTTGACTTTTGTGGTGCCCAATGATGTTTAACATACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR GCA 90 bp | CCCTCTTGTACTTTGCTTAATCACAGTGAACCAAATAAAATAGCTTTACAGCTTGGGGCCTTGGCTTCTTaGTTAGGAAGTTGCTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSCTLLNHSEPNKIALQLGALAS*LGSCLV Trigger: CACTAAGCAACTTCCTAAGCAAGAAGCCAAGGCCCC...AAGCTGTAAAGCTATTTTATTTGGTTCACTGTGATTAAGCAAAGTACAAGAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| 3UTR CAA 72 bp | ATCCACGGTTTTGTGTCACAAGGACATACTAAGACTTaGGAATTTTCCAAAGGTGATTACATCCGAGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: IHGFVSQGHTKT*EFSKGDYIRDV Trigger: CACATCTCGGATGTAATCACCTTTGGAAAATTCCAAAGTCTTAGTATGTCCTTGTGACACAAAACCGTGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CCA 90 bp | ACCGCGGGCTGCGGGGCTGGCGGGAGGTCGTGCTCGCCGGGCTCCTaGGGAAGCAGCCGGGCTGTTGTAGGACGGCTCCGGGCGCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: TAGCGAGGRSCSPGS*GSSRAVVGRLRALG Trigger: ACCGAGCGCCCGGAGCCGTCCTACAACAGCCCGGCTGCTTCCCCAGGAGCCCGGCGAGCACGACCTCCCGCCAGCCCCGCAGCCCGCGGT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CCA 90 bp | AGCGAAGCTCCTATTCAAAGCTGCCAGGACCGCGGGCTGCGGGGCTaGCGGGAGGTCGTGCTCGCCGGGCTCCTGGGGAAGCAGCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SEAPIQSCQDRGLRG*REVVLAGLLGKQPG Trigger: GCCCGGCTGCTTCCCCAGGAGCCCGGCGAGCACGACCTCCCGCCAGCCCCGCAGCCCGCGGTCCTGGCAGCTTTGAATAGGAGCTTCGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CCA 90 bp | ACCTGGCAACCCTATGGTGGCAGCGCTGCCCGCGCGAAGGGATGGTaGGGCCCAGGACGTGGGGACACCCGTGGGCATCCAGTCCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TWQPYGGSAARAKGW*GPGRGDTRGHPVRP Trigger: GGGCCGGACTGGATGCCCACGGGTGTCCCCACGTCCTGGGCCCCACCATCCCTTCGCGCGGGCAGCGCTGCCACCATAGGGTTGCCAGGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS GCA 90 bp | GAGTCCGGAGGCTCCGCATACCTGGCAACCCTATGGTGGCAGCGCTaGCCGCGCGAAGGGATGGTGGGGCCCAGGACGTGGGGACACCCG | + |
|
Preference number: 5 (lower is better) Translates to: ESGGSAYLATLWWQR*PREGMVGPRTWGHP Trigger: CGGGTGTCCCCACGTCCTGGGCCCCACCATCCCTTCGCGCGGGCAGCGCTGCCACCATAGGGTTGCCAGGTATGCGGAGCCTCCGGACTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CCA 90 bp | GTGTCCGCGGCTCCTCGGCGCCACCACCCAGCCAGGCCCGCGTCTTaGCACGGAGTTCGTCGGCCACAGACAGCTGCCCATGGTGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VSAAPRRHHPARPAS*HGVRRPQTAAHGVV Trigger: GACCACACCATGGGCAGCTGTCTGTGGCCGACGAACTCCGTGCCAAGACGCGGGCCTGGCTGGGTGGTGGCGCCGAGGAGCCGCGGACAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CCA 90 bp | TGGTGGCAGCGCTGCCCGCGCGAAGGGATGGTGGGGCCCAGGACGTaGGGACACCCGTGGGCATCCAGTCCGGCCCACGAGACTGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: WWQRCPREGMVGPRT*GHPWASSPAHETET Trigger: TGTCTCAGTCTCGTGGGCCGGACTGGATGCCCACGGGTGTCCCCACGTCCTGGGCCCCACCATCCCTTCGCGCGGGCAGCGCTGCCACCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS TCA 90 bp | CAGGACGTGGGGACACCCGTGGGCATCCAGTCCGGCCCACGAGACTaGGACACGACGCCGCTGGCCGCGGTGTCGCTGAAGGTGAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: QDVGTPVGIQSGPRD*DTTPLAAVSLKVSR Trigger: TCGGCTCACCTTCAGCGACACCGCGGCCAGCGGCGTCGTGTCTCAGTCTCGTGGGCCGGACTGGATGCCCACGGGTGTCCCCACGTCCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS GCA 90 bp | CGCGGTGTCGCTGAAGGTGAGCCGAGCGAAGCTCCTATTCAAAGCTaGCAGGACCGCGGGCTGCGGGGCTGGCGGGAGGTCGTGCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RGVAEGEPSEAPIQS*QDRGLRGWREVVLA Trigger: GGCGAGCACGACCTCCCGCCAGCCCCGCAGCCCGCGGTCCTGGCAGCTTTGAATAGGAGCTTCGCTCGGCTCACCTTCAGCGACACCGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CCA 90 bp | CATACCTGGCAACCCTATGGTGGCAGCGCTGCCCGCGCGAAGGGATaGTGGGGCCCAGGACGTGGGGACACCCGTGGGCATCCAGTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: HTWQPYGGSAARAKG*WGPGRGDTRGHPVR Trigger: CCGGACTGGATGCCCACGGGTGTCCCCACGTCCTGGGCCCCACCATCCCTTCGCGCGGGCAGCGCTGCCACCATAGGGTTGCCAGGTATG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS GCA 90 bp | GCCCACGGATCTTCCAGCGGTCTGCGCTGGGGAGGCAGGTCACTGTaGATGTCCCTGGAACGGTGTCTCTCCGACAGCCGGGCCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AHGSSSGLRWGGRSL*MSLERCLSDSRACG Trigger: CCCACAGGCCCGGCTGTCGGAGAGACACCGTTCCAGGGACATGCACAGTGACCTGCCTCCCCAGCGCAGACCGCTGGAAGATCCGTGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CCA 90 bp | CTTCCAGCGGTCTGCGCTGGGGAGGCAGGTCACTGTGCATGTCCCTaGAACGGTGTCTCTCCGACAGCCGGGCCTGTGGGCAGATTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPAVCAGEAGHCACP*NGVSPTAGPVGRLE Trigger: CTCCAATCTGCCCACAGGCCCGGCTGTCGGAGAGACACCGTTCCAGGGACATGCACAGTGACCTGCCTCCCCAGCGCAGACCGCTGGAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CCA 90 bp | GGAGAGCGGAGGACCCGAGGCCATCACAGGGTGGTCTTGGTCAGGTaGGAAGAAGCTGCAGTGCACAGGGCGTGTTCCCCCACCATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GERRTRGHHRVVLVR*EEAAVHRACSPTIG Trigger: GCCAATGGTGGGGGAACACGCCCTGTGCACTGCAGCTTCTTCCCACCTGACCAAGACCACCCTGTGATGGCCTCGGGTCCTCCGCTCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR CAA 90 bp | GGGGAGGCCCATCCCCCGCTGATCCATTCTTGGTGCCTGGAGTCAGCCTGTAGGGCCATAGGGACAGTGTaGCCAGGATGGCTCTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GEAHPPLIHSWCLESACRAIGTV*PGWLWG Trigger: CCCCCAGAGCCATCCTGGCAACACTGTCCCTATGGC...CCTACAGGCTGACTCCAGGCACCAAGAATGGATCAGCGGGGGATGGGCCTCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS GCA 90 bp | AACAATAGGAGCTGGGCAGGAGAGCCCACGGATCTTCCAGCGGTCTaGGCTGGGGAGGCAGGTCACTGTGCATGTCCCTGGAACGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NNRSWAGEPTDLPAV*AGEAGHCACPWNGV Trigger: GACACCGTTCCAGGGACATGCACAGTGACCTGCCTCCCCAGCGCAGACCGCTGGAAGATCCGTGGGCTCTCCTGCCCAGCTCCTATTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR CAA 90 bp | GTCCATGCAGCAGGTCCTGGCTTCAGGGAGCATCCCCAAGGTCCCCACGGGTATCGGAGCACCGGTCTTTaGGGATCTCTGCAGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VHAAGPGFREHPQGPHGYRSTGL*GSLQEG Trigger: ACCCTCCTGCAGAGATCCCAAAAGACCGGTGCTCCG...ATACCCGTGGGGACCTTGGGGATGCTCCCTGAAGCCAGGACCTGCTGCATGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS GCA 90 bp | CATAGGGACAGTGTTGCCAGGATGGCTCTGGGGGCCTTGGCTTCTTaGTTAGGAAGTTGCTTAGTGTTGGTCCACGGCGGCCCAGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HRDSVARMALGALAS*LGSCLVLVHGGPGG Trigger: ACCCCCTGGGCCGCCGTGGACCAACACTAAGCAACTTCCTAAGCAAGAAGCCAAGGCCCCCAGAGCCATCCTGGCAACACTGTCCCTATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CCA 90 bp | GCGGTCATCGTAGCAGACCACTCGCTTGCCGTTCACCTTGCGGGATaGGGTATACACCAACACAGCTTGCCGCTCCAGTTCCTCCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AVIVADHSLAVHLAG*GIHQHSLPLQFLQH Trigger: GTGCTGGAGGAACTGGAGCGGCAAGCTGTGTTGGTGTATACCCCATCCCGCAAGGTGAACGGCAAGCGAGTGGTCTGCTACGATGACCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR CAA 90 bp | GTGCTGCCTACAGATGCTAGGGGTCCCTCAGGATGCTGGGCCCATGCCCCGAAAATACACCAACACAGCTaGCCGCTCCAGTTCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLPTDARGPSGCWAHAPKIHQHS*PLQFLQ Trigger: CTGGAGGAACTGGAGCGGCAAGCTGTGTTGGTGTAT...TTTCGGGGCATGGGCCCAGCATCCTGAGGGACCCCTAGCATCTGTAGGCAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR CAA 90 bp | GTGCTGCCTACAGATGCTAGGGGTCCCTCAGGATGCTGGGCCCATGCCCCGAAAATGGCTCTGGGGGCCTaGGCTTCTTGCTTAGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: VLPTDARGPSGCWAHAPKMALGA*ASCLGS Trigger: ACTTCCTAAGCAAGAAGCCAAGGCCCCCAGAGCCAT...TTTCGGGGCATGGGCCCAGCATCCTGAGGGACCCCTAGCATCTGTAGGCAGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS GCA 90 bp | CGATGTAGCGGTCATCGTAGCAGACCACTCGCTTGCCGTTCACCTTaGGGGATGGGGTATACACCAACACAGCTTGCCGCTCCAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RCSGHRSRPLACRSP*GMGYTPTQLAAPVP Trigger: AGGAACTGGAGCGGCAAGCTGTGTTGGTGTATACCCCATCCCGCAAGGTGAACGGCAAGCGAGTGGTCTGCTACGATGACCGCTACATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
||
| CDS GCA 90 bp | AGGCCACCTTCACGATGTAGCGGTCATCGTAGCAGACCACTCGCTTaGCGTTCACCTTGCGGGATGGGGTATACACCAACACAGCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RPPSRCSGHRSRPLA*RSPCGMGYTPTQLA Trigger: GGCAAGCTGTGTTGGTGTATACCCCATCCCGCAAGGTGAACGGCAAGCGAGTGGTCTGCTACGATGACCGCTACATCGTGAAGGTGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
||
| CDS-3UTR CAA 90 bp | GGGGAGGCCCATCCCCCGCTGATCCATTCTTGGTGCCTGGAGTCAGCCTGTAGGTTCTTGCTTAGGAAGTaGCTTAGTGTTGGTCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: GEAHPPLIHSWCLESACRFLLRK*LSVGPR Trigger: CCGTGGACCAACACTAAGCAACTTCCTAAGCAAGAA...CCTACAGGCTGACTCCAGGCACCAAGAATGGATCAGCGGGGGATGGGCCTCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
||
| CDS GCA 90 bp | CGCTTGCCGTTCACCTTGCGGGATGGGGTATACACCAACACAGCTTaGCGCTCCAGTTCCTCCAGCACGTGTTGCTCTCTGATAGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: RLPFTLRDGVYTNTA*RSSSSSTCCSLIGV Trigger: TACTCCTATCAGAGAGCAACACGTGCTGGAGGAACTGGAGCGGCAAGCTGTGTTGGTGTATACCCCATCCCGCAAGGTGAACGGCAAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
||
| CDS GCA 90 bp | GTATACACCAACACAGCTTGCCGCTCCAGTTCCTCCAGCACGTGTTaGTCTCTGATAGGAGTATCAGACCTTGATGGCTCTTTCCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VYTNTACRSSSSSTC*SLIGVSDLDGSFLQ Trigger: TTGGAGGAAAGAGCCATCAAGGTCTGATACTCCTATCAGAGAGCAACACGTGCTGGAGGAACTGGAGCGGCAAGCTGTGTTGGTGTATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
||
| CDS-3UTR CAA 90 bp | TCGTGTCACCTGAACATGTATGTTAAACATCATTGGGCACCACAAAAGTCAAGACCCGGAGAAAGCGGGTaGTTCGGAGTCCGGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SCHLNMYVKHHWAPQKSRPGESG*FGVRRL Trigger: GAGCCTCCGGACTCCGAACAACCCGCTTTCTCCGGG...TCTTGACTTTTGTGGTGCCCAATGATGTTTAACATACATGTTCAGGTGACACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
||
| CDS-3UTR CAA 90 bp | GAAAAGGTGGTTTATTTTTGGAGCATGGTAACAGTTATGCAACTAGAGATAGCCGGGCCTGTGGGCAGATaGGAGACCCGAGATCGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: EKVVYFWSMVTVMQLEIAGPVGR*ETRDRP Trigger: CGGGCGATCTCGGGTCTCCAATCTGCCCACAGGCCC...GGCTATCTCTAGTTGCATAACTGTTACCATGCTCCAAAAATAAACCACCTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
||
| CDS-3UTR CAA 90 bp | GTTAAGTTCTCATGGCTTTCTAGAATTCTAAACACACACACACACACACACACAGCACTGTCACCCAGTTaGCCCAGCACCCTGACCACG | + |
|
Preference number: 5 (lower is better) Translates to: VKFSWLSRILNTHTHTHTALSPS*PSTLTT Trigger: CGTGGTCAGGGTGCTGGGCAAACTGGGTGACAGTGC...TGTGTGTGTGTGTGTGTGTGTGTTTAGAATTCTAGAAAGCCATGAGAACTTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR CAA 90 bp | CCCTCTTGTACTTTGCTTAATCACAGTGAACCAAATAAAATAGCTTTACAGCTTCTGCTGGGCAGAGTCTaGGACCCCGCAGCATCCCCG | + |
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Preference number: 5 (lower is better) Translates to: PSCTLLNHSEPNKIALQLLLGRV*DPAASP Trigger: CGGGGATGCTGCGGGGTCCAAGACTCTGCCCAGCAG...AAGCTGTAAAGCTATTTTATTTGGTTCACTGTGATTAAGCAAAGTACAAGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR CAA 90 bp | GTTAAGTTCTCATGGCTTTCTAGAATTCTAAACACACACACACACACACACACAGGAAGTTGCTTAGTGTaGGTCCACGGCGGCCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: VKFSWLSRILNTHTHTHTGSCLV*VHGGPG Trigger: CCCTGGGCCGCCGTGGACCAACACTAAGCAACTTCC...TGTGTGTGTGTGTGTGTGTGTGTTTAGAATTCTAGAAAGCCATGAGAACTTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS-3UTR CAA 90 bp | GTTAAGTTCTCATGGCTTTCTAGAATTCTAAACACACACACACACACACACACACATCACAGGGTGGTCTaGGTCAGGTGGGAAGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: VKFSWLSRILNTHTHTHTHHRVV*VRWEEA Trigger: AGCTTCTTCCCACCTGACCAAGACCACCCTGTGATG...TGTGTGTGTGTGTGTGTGTGTGTTTAGAATTCTAGAAAGCCATGAGAACTTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CCA 72 bp | TGCGGGGCTGGCGGGAGGTCGTGCTCGCCGGGCTCCTaGGGAAGCAGCCGGGCTGTTGTAGGACGGCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: CGAGGRSCSPGS*GSSRAVVGRLR Trigger: CCGGAGCCGTCCTACAACAGCCCGGCTGCTTCCCCAGGAGCCCGGCGAGCACGACCTCCCGCCAGCCCCGCA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CCA 72 bp | CGCTGCCCGCGCGAAGGGATGGTGGGGCCCAGGACGTaGGGACACCCGTGGGCATCCAGTCCGGCCCACGAG | + |
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Preference number: 6 (lower is better) Translates to: RCPREGMVGPRT*GHPWASSPAHE Trigger: CTCGTGGGCCGGACTGGATGCCCACGGGTGTCCCCACGTCCTGGGCCCCACCATCCCTTCGCGCGGGCAGCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS GCA 72 bp | GCGAAGCTCCTATTCAAAGCTGCCAGGACCGCGGGCTaGGGGGCTGGCGGGAGGTCGTGCTCGCCGGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: AKLLFKAARTAG*GAGGRSCSPGS Trigger: GGAGCCCGGCGAGCACGACCTCCCGCCAGCCCCGCAGCCCGCGGTCCTGGCAGCTTTGAATAGGAGCTTCGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CCA 72 bp | CCCTATGGTGGCAGCGCTGCCCGCGCGAAGGGATGGTaGGGCCCAGGACGTGGGGACACCCGTGGGCATCCA | + |
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Preference number: 6 (lower is better) Translates to: PYGGSAARAKGW*GPGRGDTRGHP Trigger: TGGATGCCCACGGGTGTCCCCACGTCCTGGGCCCCACCATCCCTTCGCGCGGGCAGCGCTGCCACCATAGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CAA 90 bp | GGTGTCCGCGGCTCCTCGGCGCCACCACCCAGCCAGGCCCGCGTCTaGGCACGGAGTTCGTCGGCCACAGACAGCTGCCCATGGTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: GVRGSSAPPPSQARV*ARSSSATDSCPWCG Trigger: ACCACACCATGGGCAGCTGTCTGTGGCCGACGAACTCCGTGCCAAGACGCGGGCCTGGCTGGGTGGTGGCGCCGAGGAGCCGCGGACACC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS TCA 72 bp | GGGACACCCGTGGGCATCCAGTCCGGCCCACGAGACTaGGACACGACGCCGCTGGCCGCGGTGTCGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: GTPVGIQSGPRD*DTTPLAAVSLK Trigger: CTTCAGCGACACCGCGGCCAGCGGCGTCGTGTCTCAGTCTCGTGGGCCGGACTGGATGCCCACGGGTGTCCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS GCA 72 bp | GGCTCCGCATACCTGGCAACCCTATGGTGGCAGCGCTaGCCGCGCGAAGGGATGGTGGGGCCCAGGACGTGG | + |
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Preference number: 6 (lower is better) Translates to: GSAYLATLWWQR*PREGMVGPRTW Trigger: CCACGTCCTGGGCCCCACCATCCCTTCGCGCGGGCAGCGCTGCCACCATAGGGTTGCCAGGTATGCGGAGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS GCA 72 bp | GCTGAAGGTGAGCCGAGCGAAGCTCCTATTCAAAGCTaGCAGGACCGCGGGCTGCGGGGCTGGCGGGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: AEGEPSEAPIQS*QDRGLRGWREV Trigger: GACCTCCCGCCAGCCCCGCAGCCCGCGGTCCTGGCAGCTTTGAATAGGAGCTTCGCTCGGCTCACCTTCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CCA 72 bp | GAAGGGATGGTGGGGCCCAGGACGTGGGGACACCCGTaGGCATCCAGTCCGGCCCACGAGACTGAGACACGA | + |
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Preference number: 6 (lower is better) Translates to: EGMVGPRTWGHP*ASSPAHETETR Trigger: TCGTGTCTCAGTCTCGTGGGCCGGACTGGATGCCCACGGGTGTCCCCACGTCCTGGGCCCCACCATCCCTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CCA 72 bp | GTCTGCGCTGGGGAGGCAGGTCACTGTGCATGTCCCTaGAACGGTGTCTCTCCGACAGCCGGGCCTGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: VCAGEAGHCACP*NGVSPTAGPVG Trigger: GCCCACAGGCCCGGCTGTCGGAGAGACACCGTTCCAGGGACATGCACAGTGACCTGCCTCCCCAGCGCAGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS GCA 72 bp | AGCTGGGCAGGAGAGCCCACGGATCTTCCAGCGGTCTaGGCTGGGGAGGCAGGTCACTGTGCATGTCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SWAGEPTDLPAV*AGEAGHCACPW Trigger: CCAGGGACATGCACAGTGACCTGCCTCCCCAGCGCAGACCGCTGGAAGATCCGTGGGCTCTCCTGCCCAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CCA 72 bp | GGCAGGAGAGCCCACGGATCTTCCAGCGGTCTGCGCTaGGGAGGCAGGTCACTGTGCATGTCCCTGGAACGG | + |
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Preference number: 6 (lower is better) Translates to: GRRAHGSSSGLR*GGRSLCMSLER Trigger: CCGTTCCAGGGACATGCACAGTGACCTGCCTCCCCAGCGCAGACCGCTGGAAGATCCGTGGGCTCTCCTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS GCA 72 bp | TCTTCCAGCGGTCTGCGCTGGGGAGGCAGGTCACTGTaGATGTCCCTGGAACGGTGTCTCTCCGACAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SSSGLRWGGRSL*MSLERCLSDSR Trigger: CCGGCTGTCGGAGAGACACCGTTCCAGGGACATGCACAGTGACCTGCCTCCCCAGCGCAGACCGCTGGAAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CCA 72 bp | GTCCCTGGAACGGTGTCTCTCCGACAGCCGGGCCTGTaGGCAGATTGGAGACCCGAGATCGCCCGGAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: VPGTVSLRQPGL*ADWRPEIARRK Trigger: CTTTCTCCGGGCGATCTCGGGTCTCCAATCTGCCCACAGGCCCGGCTGTCGGAGAGACACCGTTCCAGGGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CAA 72 bp | GGAGAGCGGAGGACCCGAGGCCATCACAGGGTGGTCTaGGTCAGGTGGGAAGAAGCTGCAGTGCACAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: GERRTRGHHRVV*VRWEEAAVHRA Trigger: CGCCCTGTGCACTGCAGCTTCTTCCCACCTGACCAAGACCACCCTGTGATGGCCTCGGGTCCTCCGCTCTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CAA 90 bp | TGTCCCTGGAACGGTGTCTCTCCGACAGCCGGGCCTGTGGGCAGATaGGAGACCCGAGATCGCCCGGAGAAAGCGGGTTGTTCGGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: CPWNGVSPTAGPVGR*ETRDRPEKAGCSES Trigger: GGACTCCGAACAACCCGCTTTCTCCGGGCGATCTCGGGTCTCCAATCTGCCCACAGGCCCGGCTGTCGGAGAGACACCGTTCCAGGGACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CCA 72 bp | ATCAGCACTACCCCGGTGCCACTGGCTGGATCCTCCTaGGCCCTTGGGCGACTGCCGGTCTGGATCAACTCT | + |
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Preference number: 6 (lower is better) Translates to: ISTTPVPLAGSS*ALGRLPVWINS Trigger: AGAGTTGATCCAGACCGGCAGTCGCCCAAGGGCCCAGGAGGATCCAGCCAGTGGCACCGGGGTAGTGCTGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CCA 72 bp | ACGGTGTCTCTCCGACAGCCGGGCCTGTGGGCAGATTaGAGACCCGAGATCGCCCGGAGAAAGCGGGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: TVSLRQPGLWAD*RPEIARRKRVV Trigger: AACAACCCGCTTTCTCCGGGCGATCTCGGGTCTCCAATCTGCCCACAGGCCCGGCTGTCGGAGAGACACCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CCA 72 bp | AGGACCCGAGGCCATCACAGGGTGGTCTTGGTCAGGTaGGAAGAAGCTGCAGTGCACAGGGCGTGTTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: RTRGHHRVVLVR*EEAAVHRACSP Trigger: GGGGGAACACGCCCTGTGCACTGCAGCTTCTTCCCACCTGACCAAGACCACCCTGTGATGGCCTCGGGTCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CAA 72 bp | AACGGTGTCTCTCCGACAGCCGGGCCTGTGGGCAGATaGGAGACCCGAGATCGCCCGGAGAAAGCGGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: NGVSPTAGPVGR*ETRDRPEKAGC Trigger: ACAACCCGCTTTCTCCGGGCGATCTCGGGTCTCCAATCTGCCCACAGGCCCGGCTGTCGGAGAGACACCGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CAA 90 bp | GCCTGTGGGCAGATTGGAGACCCGAGATCGCCCGGAGAAAGCGGGTaGTTCGGAGTCCGGAGGCTCCGCATACCTGGCAACCCTATGGTG | + |
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Preference number: 6 (lower is better) Translates to: ACGQIGDPRSPGESG*FGVRRLRIPGNPMV Trigger: CACCATAGGGTTGCCAGGTATGCGGAGCCTCCGGACTCCGAACAACCCGCTTTCTCCGGGCGATCTCGGGTCTCCAATCTGCCCACAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS GCA 72 bp | GGATCCCCCAACGGAGCACCGGTCTTTTGGGATCTCTaGAGGAGGGTGAGCAGAGCCATGTCGGAGAGCGGA | + |
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Preference number: 6 (lower is better) Translates to: GSPNGAPVFWDL*RRVSRAMSESG Trigger: TCCGCTCTCCGACATGGCTCTGCTCACCCTCCTGCAGAGATCCCAAAAGACCGGTGCTCCGTTGGGGGATCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS GCA 72 bp | ACAGGGTGGTCTTGGTCAGGTGGGAAGAAGCTGCAGTaGACAGGGCGTGTTCCCCCACCATTGGCGACAGGT | + |
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Preference number: 6 (lower is better) Translates to: TGWSWSGGKKLQ*TGRVPPPLATG Trigger: ACCTGTCGCCAATGGTGGGGGAACACGCCCTGTGCACTGCAGCTTCTTCCCACCTGACCAAGACCACCCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS GCA 72 bp | CCATCACAGGGTGGTCTTGGTCAGGTGGGAAGAAGCTaGAGTGCACAGGGCGTGTTCCCCCACCATTGGCGA | + |
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Preference number: 6 (lower is better) Translates to: PSQGGLGQVGRS*SAQGVFPHHWR Trigger: TCGCCAATGGTGGGGGAACACGCCCTGTGCACTGCAGCTTCTTCCCACCTGACCAAGACCACCCTGTGATGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CCA 72 bp | ACGGAGTTCGTCGGCCACAGACAGCTGCCCATGGTGTaGTCTCTCGGGGTGGTAGAATCTGCACTTGACCCC | + |
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Preference number: 6 (lower is better) Translates to: TEFVGHRQLPMV*SLGVVESALDP Trigger: GGGGTCAAGTGCAGATTCTACCACCCCGAGAGACCACACCATGGGCAGCTGTCTGTGGCCGACGAACTCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CCA 72 bp | ATGTCGGAGAGCGGAGGACCCGAGGCCATCACAGGGTaGTCTTGGTCAGGTGGGAAGAAGCTGCAGTGCACA | + |
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Preference number: 6 (lower is better) Translates to: MSESGGPEAITG*SWSGGKKLQCT Trigger: TGTGCACTGCAGCTTCTTCCCACCTGACCAAGACCACCCTGTGATGGCCTCGGGTCCTCCGCTCTCCGACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CAA 72 bp | GATGGCTCTGGGGGCCTTGGCTTCTTGCTTAGGAAGTaGCTTAGTGTTGGTCCACGGCGGCCCAGGGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: DGSGGLGFLLRK*LSVGPRRPRGS Trigger: TGACCCCCTGGGCCGCCGTGGACCAACACTAAGCAACTTCCTAAGCAAGAAGCCAAGGCCCCCAGAGCCATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS GCA 72 bp | GGTCATCGTAGCAGACCACTCGCTTGCCGTTCACCTTaGGGGATGGGGTATACACCAACACAGCTTGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: GHRSRPLACRSP*GMGYTPTQLAA Trigger: AGCGGCAAGCTGTGTTGGTGTATACCCCATCCCGCAAGGTGAACGGCAAGCGAGTGGTCTGCTACGATGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CCA 72 bp | GTAGCAGACCACTCGCTTGCCGTTCACCTTGCGGGATaGGGTATACACCAACACAGCTTGCCGCTCCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: VADHSLAVHLAG*GIHQHSLPLQF Trigger: GAACTGGAGCGGCAAGCTGTGTTGGTGTATACCCCATCCCGCAAGGTGAACGGCAAGCGAGTGGTCTGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CAA 90 bp | TCGCTTGCCGTTCACCTTGCGGGATGGGGTATACACCAACACAGCTaGCCGCTCCAGTTCCTCCAGCACGTGTTGCTCTCTGATAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: SLAVHLAGWGIHQHS*PLQFLQHVLLSDRS Trigger: ACTCCTATCAGAGAGCAACACGTGCTGGAGGAACTGGAGCGGCAAGCTGTGTTGGTGTATACCCCATCCCGCAAGGTGAACGGCAAGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS GCA 72 bp | TTCACCTTGCGGGATGGGGTATACACCAACACAGCTTaGCGCTCCAGTTCCTCCAGCACGTGTTGCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: FTLRDGVYTNTA*RSSSSSTCCSL Trigger: CAGAGAGCAACACGTGCTGGAGGAACTGGAGCGGCAAGCTGTGTTGGTGTATACCCCATCCCGCAAGGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CAA 72 bp | GTTCACCTTGCGGGATGGGGTATACACCAACACAGCTaGCCGCTCCAGTTCCTCCAGCACGTGTTGCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: VHLAGWGIHQHS*PLQFLQHVLLS Trigger: AGAGAGCAACACGTGCTGGAGGAACTGGAGCGGCAAGCTGTGTTGGTGTATACCCCATCCCGCAAGGTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CAA 90 bp | ATTTCTTGCCATAGGGACAGTGTTGCCAGGATGGCTCTGGGGGCCTaGGCTTCTTGCTTAGGAAGTTGCTTAGTGTTGGTCCACGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: ISCHRDSVARMALGA*ASCLGSCLVLVHGG Trigger: GCCGCCGTGGACCAACACTAAGCAACTTCCTAAGCAAGAAGCCAAGGCCCCCAGAGCCATCCTGGCAACACTGTCCCTATGGCAAGAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS GCA 72 bp | TCACGATGTAGCGGTCATCGTAGCAGACCACTCGCTTaGCGTTCACCTTGCGGGATGGGGTATACACCAACA | + |
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Preference number: 6 (lower is better) Translates to: SRCSGHRSRPLA*RSPCGMGYTPT Trigger: TGTTGGTGTATACCCCATCCCGCAAGGTGAACGGCAAGCGAGTGGTCTGCTACGATGACCGCTACATCGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS CAA 72 bp | CATAGGGACAGTGTTGCCAGGATGGCTCTGGGGGCCTaGGCTTCTTGCTTAGGAAGTTGCTTAGTGTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: HRDSVARMALGA*ASCLGSCLVLV Trigger: GACCAACACTAAGCAACTTCCTAAGCAAGAAGCCAAGGCCCCCAGAGCCATCCTGGCAACACTGTCCCTATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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| CDS GCA 72 bp | AACACAGCTTGCCGCTCCAGTTCCTCCAGCACGTGTTaGTCTCTGATAGGAGTATCAGACCTTGATGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: NTACRSSSSSTC*SLIGVSDLDGS Trigger: AGAGCCATCAAGGTCTGATACTCCTATCAGAGAGCAACACGTGCTGGAGGAACTGGAGCGGCAAGCTGTGTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039484.6 |
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