Pregenerated sensors for ZC3H12A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042677Ensembl transcript IDs: ENSMUST00000036188.8
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGGGGCCTCAGAGAGCAGGCACATGGTGCCTAACTAGCCGGTGGTaGCGGCGTCCCAGGGACAGGGTGGAAGGTGGGGTCCAGCTCAGG | + |
|
Preference number: 1 (lower is better) Translates to: RGPQRAGTWCLTSRW*RRPRDRVEGGVQLR Trigger: CCTGAGCTGGACCCCACCTTCCACCCTGTCCCTGGGACGCCGGCACCACCGGCTAGTTAGGCACCATGTGCCTGCTCTCTGAGGCCCCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| 3UTR TCA 90 bp | TCAGACACCCCAGAAGAGGGCACCAGATCTCATCACAGATGTTTGTaGGCCACCATGTGGTTGCTGACATTTGAACTCAGGACCTTCAGA | + |
|
Preference number: 1 (lower is better) Translates to: SDTPEEGTRSHHRCL*ATMWLLTFELRTFR Trigger: TCTGAAGGTCCTGAGTTCAAATGTCAGCAACCACATGGTGGCTCACAAACATCTGTGATGAGATCTGGTGCCCTCTTCTGGGGTGTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| 3UTR TCA 90 bp | TTTGAACTCAGGACCTTCAGAAGAGCAGTCGGTGCTCTTAACCACTaGGCCATCTCTCCAGCCTGCCTGGCAATAGCCTTTATTTTGTCA | + |
|
Preference number: 1 (lower is better) Translates to: FELRTFRRAVGALNH*AISPACLAIAFILS Trigger: TGACAAAATAAAGGCTATTGCCAGGCAGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACCGACTGCTCTTCTGAAGGTCCTGAGTTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| 3UTR TCA 90 bp | GCACCAGATCTCATCACAGATGTTTGTGAGCCACCATGTGGTTGCTaGCATTTGAACTCAGGACCTTCAGAAGAGCAGTCGGTGCTCTTA | + |
|
Preference number: 1 (lower is better) Translates to: APDLITDVCEPPCGC*HLNSGPSEEQSVLL Trigger: TAAGAGCACCGACTGCTCTTCTGAAGGTCCTGAGTTCAAATGTCAGCAACCACATGGTGGCTCACAAACATCTGTGATGAGATCTGGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGAAGAGCAGTCGGTGCTCTTAACCACTGAGCCATCTCTCCAGCCTGCCTGGGCCTCTGCTCCCCCATaGCTCCCACCCGGCCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: SEEQSVLLTTEPSLQPAWASAPP*LPPGPL Trigger: CAGAGGGCCGGGTGGGAGGCATGGGGGAGCAGAGGC...CCAGGCAGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACCGACTGCTCTTCTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAGAAGAGCAGTCGGTGCTCTTAACCACTGAGCCATCTCTCCAGCCTGCCTGGTCCAGCTCAGGCCTCTaGTCCCCCATGCCTCCCACC | + |
|
Preference number: 2 (lower is better) Translates to: SEEQSVLLTTEPSLQPAWSSSGL*SPMPPT Trigger: GGTGGGAGGCATGGGGGAGCAGAGGCCTGAGCTGGA...CCAGGCAGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACCGACTGCTCTTCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| 3UTR-3UTR GCA 90 bp | TACACTGTAGCTGTCTTCAGACACCCCAGAAGAGGGCACCAGATCTCATCACAGGAGGATTCCCTTGCCTaGTTCACTTGTCCTTCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: YTVAVFRHPRRGHQISSQEDSLA*FTCPSV Trigger: GACAGAAGGACAAGTGAAGCAGGCAAGGGAATCCTC...CTGTGATGAGATCTGGTGCCCTCTTCTGGGGTGTCTGAAGACAGCTACAGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| 3UTR-3UTR CCA 90 bp | CATTTAAAATATTTAAATCTCGCCTCTGTACACAGCATACATGTGTCCTCCCACATCCTATGGTATCTTTaGTTTGAGGATTCCCTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: HLKYLNLASVHSIHVSSHILWYL*FEDSLA Trigger: GGCAAGGGAATCCTCAAACCAAAGATACCATAGGAT...GTGGGAGGACACATGTATGCTGTGTACAGAGGCGAGATTTAAATATTTTAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| 3UTR GCA 72 bp | CAGAGAGCAGGCACATGGTGCCTAACTAGCCGGTGGTaGCGGCGTCCCAGGGACAGGGTGGAAGGTGGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: QRAGTWCLTSRW*RRPRDRVEGGV Trigger: GACCCCACCTTCCACCCTGTCCCTGGGACGCCGGCACCACCGGCTAGTTAGGCACCATGTGCCTGCTCTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| 3UTR CCA 72 bp | CCTCAGAGAGCAGGCACATGGTGCCTAACTAGCCGGTaGTGCCGGCGTCCCAGGGACAGGGTGGAAGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PQRAGTWCLTSR*CRRPRDRVEGG Trigger: CCCACCTTCCACCCTGTCCCTGGGACGCCGGCACCACCGGCTAGTTAGGCACCATGTGCCTGCTCTCTGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGAAGAGCAGTCGGTGCTCTTAACCACTGAGCCATCTCTCCAGCCTGCCTGGCCTGTGCGGGACGGGTaGGGGTGCCGCGGGGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SEEQSVLLTTEPSLQPAWPVRDG*GCRGAR Trigger: TCTGGCCCCGCGGCACCCCAACCCGTCCCGCACAGG...CCAGGCAGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACCGACTGCTCTTCTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| 3UTR GCA 72 bp | ATTGGCTTGAGGGGGCCTCAGAGAGCAGGCACATGGTaGCTAACTAGCCGGTGGTGCCGGCGTCCCAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: IGLRGPQRAGTW*LTSRWCRRPRD Trigger: GTCCCTGGGACGCCGGCACCACCGGCTAGTTAGGCACCATGTGCCTGCTCTCTGAGGCCCCCTCAAGCCAAT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| 3UTR CCA 72 bp | CTTCTGTCCAGCTTCCAGGGTAGGCCAGGCAGGGGCTaGGGACCGCTATCTGTGATGCCCGACAGCCCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LLSSFQGRPGRG*GPLSVMPDSPL Trigger: CAAGGGGCTGTCGGGCATCACAGATAGCGGTCCCCAGCCCCTGCCTGGCCTACCCTGGAAGCTGGACAGAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| 3UTR CCA 72 bp | GCCTCTGTACACAGCATACATGTGTCCTCCCACCCATaGGAGGTGTGGAAACAGAGGGCCTTGGAGCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ASVHSIHVSSHP*EVWKQRALEPW Trigger: CCAGGGCTCCAAGGCCCTCTGTTTCCACACCTCCCATGGGTGGGAGGACACATGTATGCTGTGTACAGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| 3UTR TCA 72 bp | CTCATCACAGATGTTTGTGAGCCACCATGTGGTTGCTaGCATTTGAACTCAGGACCTTCAGAAGAGCAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: LITDVCEPPCGC*HLNSGPSEEQS Trigger: CGACTGCTCTTCTGAAGGTCCTGAGTTCAAATGTCAGCAACCACATGGTGGCTCACAAACATCTGTGATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR TCA 90 bp | TTCCAGGGTAGGCCAGGCAGGGGCTGGGGACCGCTATCTGTGATGCCCGACAGCGGTCTCTGGGGCTCCTaGAGGACAGGAGTGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FQGRPGRGWGPLSVMPDSGLWGS*RTGVGG Trigger: CCCACCCACTCCTGTCCTTCAGGAGCCCCAGAGACC...GCTGTCGGGCATCACAGATAGCGGTCCCCAGCCCCTGCCTGGCCTACCCTGGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAGGGTAGGCCAGGCAGGGGCTGGGGACCGCTATCTGTGATGCCCGACAGCCCAGTACTCTCTGGATaGGTAGGTGGGTGGCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FQGRPGRGWGPLSVMPDSPVLSG*VGGWRG Trigger: CCCCCGCCACCCACCTACCCATCCAGAGAGTACTGG...GCTGTCGGGCATCACAGATAGCGGTCCCCAGCCCCTGCCTGGCCTACCCTGGAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR TCA 90 bp | TCCTTCTGTCCAGCTTCCAGGGTAGGCCAGGCAGGGGCTGGGGACCGCTATCTGAGTCGGTGGGGACACTaGAGTGGCCAGCACCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SFCPASRVGQAGAGDRYLSRWGH*SGQHPW Trigger: CCATGGGTGCTGGCCACTTCAGTGTCCCCACCGACT...CAGATAGCGGTCCCCAGCCCCTGCCTGGCCTACCCTGGAAGCTGGACAGAAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR TCA 90 bp | TCCTTCTGTCCAGCTTCCAGGGTAGGCCAGGCAGGGGCTGGGGACCGCTATCTGGTGGGGACCCGGAGATaGCCTGGCACCCAGCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFCPASRVGQAGAGDRYLVGTRR*PGTQLF Trigger: AAAAAGCTGGGTGCCAGGTCATCTCCGGGTCCCCAC...CAGATAGCGGTCCCCAGCCCCTGCCTGGCCTACCCTGGAAGCTGGACAGAAGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTCTGTCCAGCTTCCAGGGTAGGCCAGGCAGGGGCTGGGGACCGCTATCTGCTCTGGATGGGTAGGTaGGTGGCGGGGGCACATAGT | + |
|
Preference number: 4 (lower is better) Translates to: SFCPASRVGQAGAGDRYLLWMGR*VAGAHS Trigger: ACTATGTGCCCCCGCCACCCACCTACCCATCCAGAG...CAGATAGCGGTCCCCAGCCCCTGCCTGGCCTACCCTGGAAGCTGGACAGAAGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAGGGTAGGCCAGGCAGGGGCTGGGGACCGCTATCTGTGATGCCCGACAGCCAGACCAGTACTCTCTaGATGGGTAGGTGGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: FQGRPGRGWGPLSVMPDSQTSTL*MGRWVA Trigger: CGCCACCCACCTACCCATCCAGAGAGTACTGGTCTG...GCTGTCGGGCATCACAGATAGCGGTCCCCAGCCCCTGCCTGGCCTACCCTGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAAGAGCAGTCGGTGCTCTTAACCACTGAGCCATCTCTCCAGCCTGCCTGGCCGACTCCCCAGGGCTaGCTCCTCGCACGCCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: SEEQSVLLTTEPSLQPAWPTPQG*LLARPI Trigger: TATGGGGCGTGCGAGGAGGCAGCCCTGGGGAGTCGG...CCAGGCAGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACCGACTGCTCTTCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTCTGTCCAGCTTCCAGGGTAGGCCAGGCAGGGGCTGGGGACCGCTATCTGATAGCTGTGATAACCTaGATAGGGGCCCCGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SFCPASRVGQAGAGDRYLIAVIT*IGAPSG Trigger: CCCACTCGGGGCCCCTATGCAGGTTATCACAGCTAT...CAGATAGCGGTCCCCAGCCCCTGCCTGGCCTACCCTGGAAGCTGGACAGAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTCTGTCCAGCTTCCAGGGTAGGCCAGGCAGGGGCTGGGGACCGCTATCTGCATGGCTGCTTCCTGTaGTCAGAAGGCAGTGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFCPASRVGQAGAGDRYLHGCFL*SEGSGF Trigger: GAAACCACTGCCTTCTGAGCACAGGAAGCAGCCATG...CAGATAGCGGTCCCCAGCCCCTGCCTGGCCTACCCTGGAAGCTGGACAGAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR GCA 90 bp | GGATTCCCTTGCCTGCTTCACTTGTCCTTCTGTCCAGCTTCCAGGGTAGGCCAGGCTGGAGCACAGGTCTaGGGTGAGCCTTCTCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GFPCLLHLSFCPASRVGQAGAQV*GEPSRW Trigger: CCACCGAGAAGGCTCACCGCAGACCTGTGCTCCAGC...CTGGCCTACCCTGGAAGCTGGACAGAAGGACAAGTGAAGCAGGCAAGGGAATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAGGGTAGGCCAGGCAGGGGCTGGGGACCGCTATCTGTGATGCCCGACAGCTTCTGCAGGACACTGTaGATCTCAGAGGACGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FQGRPGRGWGPLSVMPDSFCRTL*ISEDEY Trigger: GTACTCGTCCTCTGAGATCCACAGTGTCCTGCAGAA...GCTGTCGGGCATCACAGATAGCGGTCCCCAGCCCCTGCCTGGCCTACCCTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | TTCCAGGGTAGGCCAGGCAGGGGCTGGGGACCGCTATCTGTGATGCCCGACAGCCTTGGCCGCTCAGGGTaGAAAAATCGGCACTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: FQGRPGRGWGPLSVMPDSLGRSG*KNRHLI Trigger: AATCAAGTGCCGATTTTTCCACCCTGAGCGGCCAAG...GCTGTCGGGCATCACAGATAGCGGTCCCCAGCCCCTGCCTGGCCTACCCTGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | GGATTCCCTTGCCTGCTTCACTTGTCCTTCTGTCCAGCTTCCAGGGTAGGCCAGGTGCAAGCCACTCTGTaGGCCCAAAGCTGCCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GFPCLLHLSFCPASRVGQVQATL*AQSCPH Trigger: GTGGGGGCAGCTTTGGGCCCACAGAGTGGCTTGCAC...CTGGCCTACCCTGGAAGCTGGACAGAAGGACAAGTGAAGCAGGCAAGGGAATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | GGATTCCCTTGCCTGCTTCACTTGTCCTTCTGTCCAGCTTCCAGGGTAGGCCAGGGATGGGTAGGTGGGTaGCGGGGGCACATAGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GFPCLLHLSFCPASRVGQGWVGG*RGHIVG Trigger: ACCGACTATGTGCCCCCGCCACCCACCTACCCATCC...CTGGCCTACCCTGGAAGCTGGACAGAAGGACAAGTGAAGCAGGCAAGGGAATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR GCA 90 bp | GGATTCCCTTGCCTGCTTCACTTGTCCTTCTGTCCAGCTTCCAGGGTAGGCCAGCAGGTCTCAGGTCGCTaGCCTCTCTGTCCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GFPCLLHLSFCPASRVGQQVSGR*PLCPPL Trigger: CAGAGGAGGACAGAGAGGGCAGCGACCTGAGACCTG...CTGGCCTACCCTGGAAGCTGGACAGAAGGACAAGTGAAGCAGGCAAGGGAATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTCTGTCCAGCTTCCAGGGTAGGCCAGGCAGGGGCTGGGGACCGCTATCTGGACTCCACAGACTCATaGTGGGGTTGGATTCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFCPASRVGQAGAGDRYLDSTDS*WGWILG Trigger: TCCAAGAATCCAACCCCACCATGAGTCTGTGGAGTC...CAGATAGCGGTCCCCAGCCCCTGCCTGGCCTACCCTGGAAGCTGGACAGAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR TCA 90 bp | GGATTCCCTTGCCTGCTTCACTTGTCCTTCTGTCCAGCTTCCAGGGTAGGCCAGCATTGCTTCCGTCGATaGCCACAGGTCTCAGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GFPCLLHLSFCPASRVGQHCFRR*PQVSGR Trigger: GCGACCTGAGACCTGTGGTCATCGACGGAAGCAATG...CTGGCCTACCCTGGAAGCTGGACAGAAGGACAAGTGAAGCAGGCAAGGGAATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR GCA 90 bp | GGATTCCCTTGCCTGCTTCACTTGTCCTTCTGTCCAGCTTCCAGGGTAGGCCAGGAGGTCGACCCTGGCTaGTGTGTCTGTCCTCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GFPCLLHLSFCPASRVGQEVDPG*CVCPQD Trigger: GTCTTGAGGACAGACACAGCAGCCAGGGTCGACCTC...CTGGCCTACCCTGGAAGCTGGACAGAAGGACAAGTGAAGCAGGCAAGGGAATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAAGAGCAGTCGGTGCTCTTAACCACTGAGCCATCTCTCCAGCCTGCCTGGTCCTGCCTCTCGCCTTaGAGGTCTCGGTACGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SEEQSVLLTTEPSLQPAWSCLSP*RSRYVS Trigger: TGACACGTACCGAGACCTCCAAGGCGAGAGGCAGGA...CCAGGCAGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACCGACTGCTCTTCTGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | GGATTCCCTTGCCTGCTTCACTTGTCCTTCTGTCCAGCTTCCAGGGTAGGCCAGCTAGGGACACAGAGCTaGACTGAGAGGCAGGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GFPCLLHLSFCPASRVGQLGTQS*TERQGK Trigger: CTTCCCCTGCCTCTCAGTCCAGCTCTGTGTCCCTAG...CTGGCCTACCCTGGAAGCTGGACAGAAGGACAAGTGAAGCAGGCAAGGGAATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR TCA 90 bp | TACACTGTAGCTGTCTTCAGACACCCCAGAAGAGGGCACCAGATCTCATCACAGTGGAGTCCTGGGAGGTaGGAGGAGAGCGTTGGCACG | + |
|
Preference number: 4 (lower is better) Translates to: YTVAVFRHPRRGHQISSQWSPGR*EESVGT Trigger: CGTGCCAACGCTCTCCTCTCACCTCCCAGGACTCCA...CTGTGATGAGATCTGGTGCCCTCTTCTGGGGTGTCTGAAGACAGCTACAGTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAAGAGCAGTCGGTGCTCTTAACCACTGAGCCATCTCTCCAGCCTGCCTGGCTTCCCATAGGGGCATaGCTGCTTCCTGTGCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SEEQSVLLTTEPSLQPAWLPIGA*LLPVLR Trigger: TCTGAGCACAGGAAGCAGCCATGCCCCTATGGGAAG...CCAGGCAGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACCGACTGCTCTTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR GCA 90 bp | TCAGAAGAGCAGTCGGTGCTCTTAACCACTGAGCCATCTCTCCAGCCTGCCTGGTGGACTCCCAGCTTCTaGAGGACACTGTGGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SEEQSVLLTTEPSLQPAWWTPSF*RTLWIS Trigger: TGAGATCCACAGTGTCCTGCAGAAGCTGGGAGTCCA...CCAGGCAGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACCGACTGCTCTTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | GGATTCCCTTGCCTGCTTCACTTGTCCTTCTGTCCAGCTTCCAGGGTAGGCCAGGCAGGGGAAGGCCTCTaGCTACTTTTGTCCTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: GFPCLLHLSFCPASRVGQAGEGL*LLLSLT Trigger: AGTCAAGGACAAAAGTAGCCAGAGGCCTTCCCCTGC...CTGGCCTACCCTGGAAGCTGGACAGAAGGACAAGTGAAGCAGGCAAGGGAATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAAGAGCAGTCGGTGCTCTTAACCACTGAGCCATCTCTCCAGCCTGCCTGGGCCAGCACCCATGGCTaGTCTAAAAGGAGAAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SEEQSVLLTTEPSLQPAWASTHG*SKRRKG Trigger: TCCTTTTCTCCTTTTAGACCAGCCATGGGTGCTGGC...CCAGGCAGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACCGACTGCTCTTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | GGATTCCCTTGCCTGCTTCACTTGTCCTTCTGTCCAGCTTCCAGGGTAGGCCAGACTTCCTTGTTCCCATaGCTCATGGCCACATTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GFPCLLHLSFCPASRVGQTSLFP*LMATLL Trigger: AAGCAATGTGGCCATGAGCCATGGGAACAAGGAAGT...CTGGCCTACCCTGGAAGCTGGACAGAAGGACAAGTGAAGCAGGCAAGGGAATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR GCA 90 bp | TTGAACTCAGGACCTTCAGAAGAGCAGTCGGTGCTCTTAACCACTGAGCCATCTCACCGTGTTGGTGTCTaGTTGGACTCCCAGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LNSGPSEEQSVLLTTEPSHRVGV*LDSQLL Trigger: CAGAAGCTGGGAGTCCAAGCAGACACCAACACGGTG...AGATGGCTCAGTGGTTAAGAGCACCGACTGCTCTTCTGAAGGTCCTGAGTTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR GCA 90 bp | TACACTGTAGCTGTCTTCAGACACCCCAGAAGAGGGCACCAGATCTCATCACAGAGGAGAAAAGGAAGGTaGTGCTGGGACCTTGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: YTVAVFRHPRRGHQISSQRRKGR*CWDLGS Trigger: GGATCCAAGGTCCCAGCAGCACCTTCCTTTTCTCCT...CTGTGATGAGATCTGGTGCCCTCTTCTGGGGTGTCTGAAGACAGCTACAGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | TTGAACTCAGGACCTTCAGAAGAGCAGTCGGTGCTCTTAACCACTGAGCCATCTGACTCATGGTGGGGTTaGATTCTTGGACAGGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LNSGPSEEQSVLLTTEPSDSWWG*ILGQAS Trigger: CGAAGCCTGTCCAAGAATCCAACCCCACCATGAGTC...AGATGGCTCAGTGGTTAAGAGCACCGACTGCTCTTCTGAAGGTCCTGAGTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | TACACTGTAGCTGTCTTCAGACACCCCAGAAGAGGGCACCAGATCTCATCACAGTCCCGAAGGATGTGCTaGTCTGTGATAGGCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: YTVAVFRHPRRGHQISSQSRRMC*SVIGTS Trigger: AGATGTGCCTATCACAGACCAGCACATCCTTCGGGA...CTGTGATGAGATCTGGTGCCCTCTTCTGGGGTGTCTGAAGACAGCTACAGTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | CATTTAAAATATTTAAATCTCGCCTCTGTACACAGCATACATGTGTCCTCCCACTCGGCCACAGAGCGCTaGGGACGGCTTGGCCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HLKYLNLASVHSIHVSSHSATER*GRLGRS Trigger: TGAGCGGCCAAGCCGTCCCCAGCGCTCTGTGGCCGA...GTGGGAGGACACATGTATGCTGTGTACAGAGGCGAGATTTAAATATTTTAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR GCA 90 bp | TTGAACTCAGGACCTTCAGAAGAGCAGTCGGTGCTCTTAACCACTGAGCCATCTAGTTCCCGAAGGATGTaGTGGTCTGTGATAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LNSGPSEEQSVLLTTEPSSSRRM*WSVIGT Trigger: TGTGCCTATCACAGACCAGCACATCCTTCGGGAACT...AGATGGCTCAGTGGTTAAGAGCACCGACTGCTCTTCTGAAGGTCCTGAGTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | TTGAACTCAGGACCTTCAGAAGAGCAGTCGGTGCTCTTAACCACTGAGCCATCTACGGTAATATCTGTGTaGCCTCGCTCCAGAAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNSGPSEEQSVLLTTEPSTVISV*PRSRNQ Trigger: CTGGTTTCTGGAGCGAGGCCACACAGATATTACCGT...AGATGGCTCAGTGGTTAAGAGCACCGACTGCTCTTCTGAAGGTCCTGAGTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | TACACTGTAGCTGTCTTCAGACACCCCAGAAGAGGGCACCAGATCTCATCACAGCATAATTCTGACATCTaGCTCTCCAGGGAACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: YTVAVFRHPRRGHQISSQHNSDI*LSREPM Trigger: CATTGGTTCCCTGGAGAGCCAGATGTCAGAATTATG...CTGTGATGAGATCTGGTGCCCTCTTCTGGGGTGTCTGAAGACAGCTACAGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR TCA 90 bp | TCATTTAAAATATTTAAATCTCGCCTCTGTACACAGCATACATGTGTCCTCCCAGCAGCCGCTCCTCGATaGAGCGTTTCCACTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SFKIFKSRLCTQHTCVLPAAAPR*SVSTPA Trigger: GGCAGGAGTGGAAACGCTTCATCGAGGAGCGGCTGC...TGGGAGGACACATGTATGCTGTGTACAGAGGCGAGATTTAAATATTTTAAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | TTGAACTCAGGACCTTCAGAAGAGCAGTCGGTGCTCTTAACCACTGAGCCATCTAGACACCACACAGCTTaGTATATACACCAGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LNSGPSEEQSVLLTTEPSRHHTA*YIHQPF Trigger: AAAGGGCTGGTGTATATACCAAGCTGTGTGGTGTCT...AGATGGCTCAGTGGTTAAGAGCACCGACTGCTCTTCTGAAGGTCCTGAGTTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | TCATTTAAAATATTTAAATCTCGCCTCTGTACACAGCATACATGTGTCCTCCCACACAGGATCCTGGTCTaGCTGAGGTCGACCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFKIFKSRLCTQHTCVLPHRILV*LRSTLA Trigger: AGCCAGGGTCGACCTCAGCCAGACCAGGATCCTGTG...TGGGAGGACACATGTATGCTGTGTACAGAGGCGAGATTTAAATATTTTAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | CATTTAAAATATTTAAATCTCGCCTCTGTACACAGCATACATGTGTCCTCCCACCCCCTAGCACCGTGTTaGTGTCTGCTTGGACTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HLKYLNLASVHSIHVSSHPLAPC*CLLGLP Trigger: TGGGAGTCCAAGCAGACACCAACACGGTGCTAGGGG...GTGGGAGGACACATGTATGCTGTGTACAGAGGCGAGATTTAAATATTTTAAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | TCATTTAAAATATTTAAATCTCGCCTCTGTACACAGCATACATGTGTCCTCCCAGTGAGAGGAGAGCGTTaGCACGGAGCTCATCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFKIFKSRLCTQHTCVLPVRGER*HGAHRP Trigger: TGGCCGATGAGCTCCGTGCCAACGCTCTCCTCTCAC...TGGGAGGACACATGTATGCTGTGTACAGAGGCGAGATTTAAATATTTTAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR TCA 90 bp | CATTTAAAATATTTAAATCTCGCCTCTGTACACAGCATACATGTGTCCTCCCACGGCTACTTTTGTCCTTaGCTGGAGTCCTGGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HLKYLNLASVHSIHVSSHGYFCP*LESWEV Trigger: CACCTCCCAGGACTCCAGTCAAGGACAAAAGTAGCC...GTGGGAGGACACATGTATGCTGTGTACAGAGGCGAGATTTAAATATTTTAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR TCA 90 bp | CATTTAAAATATTTAAATCTCGCCTCTGTACACAGCATACATGTGTCCTCCCACCAGGGAACCAATGCCTaGATCAAGGCACTCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HLKYLNLASVHSIHVSSHQGTNA*IKALLG Trigger: TCCCAGGAGTGCCTTGATTCAGGCATTGGTTCCCTG...GTGGGAGGACACATGTATGCTGTGTACAGAGGCGAGATTTAAATATTTTAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | TCATTTAAAATATTTAAATCTCGCCTCTGTACACAGCATACATGTGTCCTCCCAGCCGACCCGCCTGGATaGCGTGAACACCAAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFKIFKSRLCTQHTCVLPADPPG*REHQDL Trigger: AAGATCTTGGTGTTCACGCCATCCAGGCGGGTCGGC...TGGGAGGACACATGTATGCTGTGTACAGAGGCGAGATTTAAATATTTTAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | CATTTAAAATATTTAAATCTCGCCTCTGTACACAGCATACATGTGTCCTCCCACAGCTTCTACCAGGTGTaGGGGGAAGACACCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: HLKYLNLASVHSIHVSSHSFYQV*GEDTTQ Trigger: CTGTGTGGTGTCTTCCCCCCACACCTGGTAGAAGCT...GTGGGAGGACACATGTATGCTGTGTACAGAGGCGAGATTTAAATATTTTAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR GCA 90 bp | TCATTTAAAATATTTAAATCTCGCCTCTGTACACAGCATACATGTGTCCTCCCAAAGTCCACCTTCATCTaGAGCTCGGAAGTAGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SFKIFKSRLCTQHTCVLPKSTFI*SSEVGA Trigger: GGCCCCTACTTCCGAGCTGCAGATGAAGGTGGACTT...TGGGAGGACACATGTATGCTGTGTACAGAGGCGAGATTTAAATATTTTAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR GCA 90 bp | TCATTTAAAATATTTAAATCTCGCCTCTGTACACAGCATACATGTGTCCTCCCAAAGCGTTTCCACTCCTaGCTCTCGCCTTGGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFKIFKSRLCTQHTCVLPKRFHS*LSPWRS Trigger: AGACCTCCAAGGCGAGAGGCAGGAGTGGAAACGCTT...TGGGAGGACACATGTATGCTGTGTACAGAGGCGAGATTTAAATATTTTAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | TCATTTAAAATATTTAAATCTCGCCTCTGTACACAGCATACATGTGTCCTCCCAGTGTTGGTGTCTGCTTaGACTCCCAGCTTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFKIFKSRLCTQHTCVLPVLVSA*TPSFCR Trigger: CCTGCAGAAGCTGGGAGTCCAAGCAGACACCAACAC...TGGGAGGACACATGTATGCTGTGTACAGAGGCGAGATTTAAATATTTTAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CCA 90 bp | TCATTTAAAATATTTAAATCTCGCCTCTGTACACAGCATACATGTGTCCTCCCATGTTCCCATGGCTCATaGCCACATTGCTTCCGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SFKIFKSRLCTQHTCVLPCSHGS*PHCFRR Trigger: TCGACGGAAGCAATGTGGCCATGAGCCATGGGAACA...TGGGAGGACACATGTATGCTGTGTACAGAGGCGAGATTTAAATATTTTAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR TCA 90 bp | CATTTAAAATATTTAAATCTCGCCTCTGTACACAGCATACATGTGTCCTCCCACGGAAAAATCGGCACTTaGTTCCATACGTACATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLKYLNLASVHSIHVSSHGKIGT*FHTYIS Trigger: AGAAATGTACGTATGGAATCAAGTGCCGATTTTTCC...GTGGGAGGACACATGTATGCTGTGTACAGAGGCGAGATTTAAATATTTTAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CAA 90 bp | TTCCAGGGTAGGCCAGGCAGGGGCTGGGGACCGCTATCTGTGATGCCCGACAGCCTCCTGCCTCTCGCCTaGGAGGTCTCGGTACGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: FQGRPGRGWGPLSVMPDSLLPLA*EVSVRV Trigger: GACACGTACCGAGACCTCCAAGGCGAGAGGCAGGAG...GCTGTCGGGCATCACAGATAGCGGTCCCCAGCCCCTGCCTGGCCTACCCTGGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 90 bp | AGGCTCCTGCCAGCTGGAGCACAGGTCTGCGGTGAGCCTTCTCGGTaGGGACCCGGAGATGACCTGGCACCCAGCTTTTTCCCATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RLLPAGAQVCGEPSR*GPGDDLAPSFFPSR Trigger: CCTGGATGGGAAAAAGCTGGGTGCCAGGTCATCTCCGGGTCCCCACCGAGAAGGCTCACCGCAGACCTGTGCTCCAGCTGGCAGGAGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CAA 90 bp | TTCCAGGGTAGGCCAGGCAGGGGCTGGGGACCGCTATCTGTGATGCCCGACAGCTCTCGGTACGTGTCATaGGAGACCACCACTCCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: FQGRPGRGWGPLSVMPDSSRYVS*ETTTPS Trigger: CGACGGAGTGGTGGTCTCCAATGACACGTACCGAGA...GCTGTCGGGCATCACAGATAGCGGTCCCCAGCCCCTGCCTGGCCTACCCTGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS GCA 90 bp | GGGGACCCGGAGATGACCTGGCACCCAGCTTTTTCCCATCCAGGCTaGCTGGTTCAGCCTCTAGGGACACAGAGCTGGACTGAGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GDPEMTWHPAFSHPG*LVQPLGTQSWTERQ Trigger: CTGCCTCTCAGTCCAGCTCTGTGTCCCTAGAGGCTGAACCAGGCAGCCTGGATGGGAAAAAGCTGGGTGCCAGGTCATCTCCGGGTCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 90 bp | CACAGGTCTGCGGTGAGCCTTCTCGGTGGGGACCCGGAGATGACCTaGCACCCAGCTTTTTCCCATCCAGGCTGCCTGGTTCAGCCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: HRSAVSLLGGDPEMT*HPAFSHPGCLVQPL Trigger: TAGAGGCTGAACCAGGCAGCCTGGATGGGAAAAAGCTGGGTGCCAGGTCATCTCCGGGTCCCCACCGAGAAGGCTCACCGCAGACCTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS TCA 90 bp | GGAAGGCCTCTGGCTACTTTTGTCCTTGACTGGAGTCCTGGGAGGTaGGAGGAGAGCGTTGGCACGGAGCTCATCGGCCACAGAGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GRPLATFVLDWSPGR*EESVGTELIGHRAL Trigger: CAGCGCTCTGTGGCCGATGAGCTCCGTGCCAACGCTCTCCTCTCACCTCCCAGGACTCCAGTCAAGGACAAAAGTAGCCAGAGGCCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS TCA 90 bp | AGCTGGACTGAGAGGCAGGGGAAGGCCTCTGGCTACTTTTGTCCTTaGCTGGAGTCCTGGGAGGTGAGAGGAGAGCGTTGGCACGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SWTERQGKASGYFCP*LESWEVRGERWHGA Trigger: AGCTCCGTGCCAACGCTCTCCTCTCACCTCCCAGGACTCCAGTCAAGGACAAAAGTAGCCAGAGGCCTTCCCCTGCCTCTCAGTCCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 90 bp | CTGCAGCTCGGAAGTAGGGGCCTCTTTAGCCACAGGATCCTGGTCTaGCTGAGGTCGACCCTGGCTGCTGTGTCTGTCCTCAAGACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LQLGSRGLFSHRILV*LRSTLAAVSVLKTP Trigger: TGGAGTCTTGAGGACAGACACAGCAGCCAGGGTCGACCTCAGCCAGACCAGGATCCTGTGGCTAAAGAGGCCCCTACTTCCGAGCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 90 bp | GACTCCCCAGGGCTGCCTCCTCGCACGCCCCATAATTCTGACATCTaGCTCTCCAGGGAACCAATGCCTGAATCAAGGCACTCCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: DSPGLPPRTPHNSDI*LSREPMPESRHSWE Trigger: CTCCCAGGAGTGCCTTGATTCAGGCATTGGTTCCCTGGAGAGCCAGATGTCAGAATTATGGGGCGTGCGAGGAGGCAGCCCTGGGGAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTCTGTCCAGCTTCCAGGGTAGGCCAGGCAGGGGCTGGGGACCGCTATCTGAGACTCATGGTGGGGTaGGATTCTTGGACAGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SFCPASRVGQAGAGDRYLRLMVG*DSWTGF Trigger: GAAGCCTGTCCAAGAATCCAACCCCACCATGAGTCT...CAGATAGCGGTCCCCAGCCCCTGCCTGGCCTACCCTGGAAGCTGGACAGAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTCTGTCCAGCTTCCAGGGTAGGCCAGGCAGGGGCTGGGGACCGCTATCTGCAAGAGAAGACTTCCTaGTTCCCATGGCTCATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SFCPASRVGQAGAGDRYLQEKTS*FPWLMA Trigger: GGCCATGAGCCATGGGAACAAGGAAGTCTTCTCTTG...CAGATAGCGGTCCCCAGCCCCTGCCTGGCCTACCCTGGAAGCTGGACAGAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS TCA 90 bp | AGCTCGGAAGTAGGGGCCTCTTTAGCCACAGGATCCTGGTCTGGCTaGGGTCGACCCTGGCTGCTGTGTCTGTCCTCAAGACTCCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSEVGASLATGSWSG*GRPWLLCLSSRLHR Trigger: TCTGTGGAGTCTTGAGGACAGACACAGCAGCCAGGGTCGACCTCAGCCAGACCAGGATCCTGTGGCTAAAGAGGCCCCTACTTCCGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS GCA 90 bp | CTGGGGGCCGTCAGGGCCTGGCATTCTCGTTCAGTAGCTGAGCCATaGTTCACCAATTCCCCTAGCACCGTGTTGGTGTCTGCTTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LGAVRAWHSRSVAEP*FTNSPSTVLVSAWT Trigger: AGTCCAAGCAGACACCAACACGGTGCTAGGGGAATTGGTGAAGCATGGCTCAGCTACTGAACGAGAATGCCAGGCCCTGACGGCCCCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 90 bp | ATGCCTGAATCAAGGCACTCCTGGGAGGTGTATGGGAGTGAGTCCTaGGTGTGTGCAAGCCACTCTGTGGGCCCAAAGCTGCCCCCACTA | + |
|
Preference number: 5 (lower is better) Translates to: MPESRHSWEVYGSES*VCASHSVGPKLPPL Trigger: TAGTGGGGGCAGCTTTGGGCCCACAGAGTGGCTTGCACACACCCAGGACTCACTCCCATACACCTCCCAGGAGTGCCTTGATTCAGGCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTCTGTCCAGCTTCCAGGGTAGGCCAGGCAGGGGCTGGGGACCGCTATCTGTCAGGGGGCATGAACTaGTCATTGACGAAGGAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SFCPASRVGQAGAGDRYLSGGMN*SLTKEY Trigger: GTACTCCTTCGTCAATGACAAGTTCATGCCCCCTGA...CAGATAGCGGTCCCCAGCCCCTGCCTGGCCTACCCTGGAAGCTGGACAGAAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTCTGTCCAGCTTCCAGGGTAGGCCAGGCAGGGGCTGGGGACCGCTATCTGGGCATGAACTTGTCATaGACGAAGGAGTACATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SFCPASRVGQAGAGDRYLGMNLS*TKEYMS Trigger: GCTCATGTACTCCTTCGTCAATGACAAGTTCATGCC...CAGATAGCGGTCCCCAGCCCCTGCCTGGCCTACCCTGGAAGCTGGACAGAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 90 bp | GTCGACCCTGGCTGCTGTGTCTGTCCTCAAGACTCCACAGACTCATaGTGGGGTTGGATTCTTGGACAGGCTTCGTTCCACAAGGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VDPGCCVCPQDSTDS*WGWILGQASFHKGH Trigger: GTGACCCTTGTGGAACGAAGCCTGTCCAAGAATCCAACCCCACCATGAGTCTGTGGAGTCTTGAGGACAGACACAGCAGCCAGGGTCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 90 bp | GAGCCATGCTTCACCAATTCCCCTAGCACCGTGTTGGTGTCTGCTTaGACTCCCAGCTTCTGCAGGACACTGTGGATCTCAGAGGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: EPCFTNSPSTVLVSA*TPSFCRTLWISEDE Trigger: CTCGTCCTCTGAGATCCACAGTGTCCTGCAGAAGCTGGGAGTCCAAGCAGACACCAACACGGTGCTAGGGGAATTGGTGAAGCATGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 90 bp | GACATCTGGCTCTCCAGGGAACCAATGCCTGAATCAAGGCACTCCTaGGAGGTGTATGGGAGTGAGTCCTGGGTGTGTGCAAGCCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: DIWLSREPMPESRHS*EVYGSESWVCASHS Trigger: AGAGTGGCTTGCACACACCCAGGACTCACTCCCATACACCTCCCAGGAGTGCCTTGATTCAGGCATTGGTTCCCTGGAGAGCCAGATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CAA 90 bp | TTGAACTCAGGACCTTCAGAAGAGCAGTCGGTGCTCTTAACCACTGAGCCATCTGGTGAGAGGAGAGCGTaGGCACGGAGCTCATCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LNSGPSEEQSVLLTTEPSGERRA*ARSSSA Trigger: GGCCGATGAGCTCCGTGCCAACGCTCTCCTCTCACC...AGATGGCTCAGTGGTTAAGAGCACCGACTGCTCTTCTGAAGGTCCTGAGTTCAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS GCA 90 bp | AATTCCCCTAGCACCGTGTTGGTGTCTGCTTGGACTCCCAGCTTCTaGAGGACACTGTGGATCTCAGAGGACGAGTACCCCAGTTTACGG | + |
|
Preference number: 5 (lower is better) Translates to: NSPSTVLVSAWTPSF*RTLWISEDEYPSLR Trigger: CCGTAAACTGGGGTACTCGTCCTCTGAGATCCACAGTGTCCTGCAGAAGCTGGGAGTCCAAGCAGACACCAACACGGTGCTAGGGGAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS GCA 90 bp | CTCGCACGCCCCATAATTCTGACATCTGGCTCTCCAGGGAACCAATaGCTGAATCAAGGCACTCCTGGGAGGTGTATGGGAGTGAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LARPIILTSGSPGNQ*LNQGTPGRCMGVSP Trigger: AGGACTCACTCCCATACACCTCCCAGGAGTGCCTTGATTCAGGCATTGGTTCCCTGGAGAGCCAGATGTCAGAATTATGGGGCGTGCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 90 bp | ACCGTGTTGGTGTCTGCTTGGACTCCCAGCTTCTGCAGGACACTGTaGATCTCAGAGGACGAGTACCCCAGTTTACGGAAAAAGTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: TVLVSAWTPSFCRTL*ISEDEYPSLRKKST Trigger: GGTGGACTTTTTCCGTAAACTGGGGTACTCGTCCTCTGAGATCCACAGTGTCCTGCAGAAGCTGGGAGTCCAAGCAGACACCAACACGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 90 bp | GTCTGTGATAGGCACATCTGGTCGAGGCTGTTCCTTCCTCCAAGATaGCACAAACACGGTAATATCTGTGTGGCCTCGCTCCAGAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: VCDRHIWSRLFLPPR*HKHGNICVASLQKP Trigger: TGGTTTCTGGAGCGAGGCCACACAGATATTACCGTGTTTGTGCCATCTTGGAGGAAGGAACAGCCTCGACCAGATGTGCCTATCACAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CAA 90 bp | TACACTGTAGCTGTCTTCAGACACCCCAGAAGAGGGCACCAGATCTCATCACAGTGGCTACTTTTGTCCTaGACTGGAGTCCTGGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: YTVAVFRHPRRGHQISSQWLLLS*TGVLGG Trigger: ACCTCCCAGGACTCCAGTCAAGGACAAAAGTAGCCA...CTGTGATGAGATCTGGTGCCCTCTTCTGGGGTGTCTGAAGACAGCTACAGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS GCA 90 bp | GGCGTGAACACCAAGATCTTCTTTTTCTCTAGTTCCCGAAGGATGTaGTGGTCTGTGATAGGCACATCTGGTCGAGGCTGTTCCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GVNTKIFFFSSSRRM*WSVIGTSGRGCSFL Trigger: GAGGAAGGAACAGCCTCGACCAGATGTGCCTATCACAGACCAGCACATCCTTCGGGAACTAGAGAAAAAGAAGATCTTGGTGTTCACGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 90 bp | GTGAACACCAAGATCTTCTTTTTCTCTAGTTCCCGAAGGATGTGCTaGTCTGTGATAGGCACATCTGGTCGAGGCTGTTCCTTCCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VNTKIFFFSSSRRMC*SVIGTSGRGCSFLQ Trigger: TTGGAGGAAGGAACAGCCTCGACCAGATGTGCCTATCACAGACCAGCACATCCTTCGGGAACTAGAGAAAAAGAAGATCTTGGTGTTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CAA 90 bp | CATTTAAAATATTTAAATCTCGCCTCTGTACACAGCATACATGTGTCCTCCCACGGTGGGGTTGGATTCTaGGACAGGCTTCGTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: HLKYLNLASVHSIHVSSHGGVGF*DRLRST Trigger: TGTGGAACGAAGCCTGTCCAAGAATCCAACCCCACC...GTGGGAGGACACATGTATGCTGTGTACAGAGGCGAGATTTAAATATTTTAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS-3UTR CAA 90 bp | TCATTTAAAATATTTAAATCTCGCCTCTGTACACAGCATACATGTGTCCTCCCAAAGACACCACACAGCTaGGTATATACACCAGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SFKIFKSRLCTQHTCVLPKTPHS*VYTPAL Trigger: AAGGGCTGGTGTATATACCAAGCTGTGTGGTGTCTT...TGGGAGGACACATGTATGCTGTGTACAGAGGCGAGATTTAAATATTTTAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 72 bp | GCGGTGAGCCTTCTCGGTGGGGACCCGGAGATGACCTaGCACCCAGCTTTTTCCCATCCAGGCTGCCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: AVSLLGGDPEMT*HPAFSHPGCLV Trigger: AACCAGGCAGCCTGGATGGGAAAAAGCTGGGTGCCAGGTCATCTCCGGGTCCCCACCGAGAAGGCTCACCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 72 bp | GTGGGGGTAATGGGTACGGCTCAGACCAGTACTCTCTaGATGGGTAGGTGGGTGGCGGGGGCACATAGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: VGVMGTAQTSTL*MGRWVAGAHSR Trigger: CCGACTATGTGCCCCCGCCACCCACCTACCCATCCAGAGAGTACTGGTCTGAGCCGTACCCATTACCCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 72 bp | GGAAGTAGGGGCCTCTTTAGCCACAGGATCCTGGTCTaGCTGAGGTCGACCCTGGCTGCTGTGTCTGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GSRGLFSHRILV*LRSTLAAVSVL Trigger: GAGGACAGACACAGCAGCCAGGGTCGACCTCAGCCAGACCAGGATCCTGTGGCTAAAGAGGCCCCTACTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 72 bp | CCTGCCTCTCGCCTTGGAGGTCTCGGTACGTGTCATTaGAGACCACCACTCCGTCGGATTCGAAGGCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PASRLGGLGTCH*RPPLRRIRRPA Trigger: AGCTGGCCTTCGAATCCGACGGAGTGGTGGTCTCCAATGACACGTACCGAGACCTCCAAGGCGAGAGGCAGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 72 bp | CCAGGCTGCCTGGTTCAGCCTCTAGGGACACAGAGCTaGACTGAGAGGCAGGGGAAGGCCTCTGGCTACTTT | + |
|
Preference number: 6 (lower is better) Translates to: PGCLVQPLGTQS*TERQGKASGYF Trigger: AAAGTAGCCAGAGGCCTTCCCCTGCCTCTCAGTCCAGCTCTGTGTCCCTAGAGGCTGAACCAGGCAGCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CAA 72 bp | TCCTGCCTCTCGCCTTGGAGGTCTCGGTACGTGTCATaGGAGACCACCACTCCGTCGGATTCGAAGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SCLSPWRSRYVS*ETTTPSDSKAS Trigger: GCTGGCCTTCGAATCCGACGGAGTGGTGGTCTCCAATGACACGTACCGAGACCTCCAAGGCGAGAGGCAGGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS TCA 72 bp | GTAGGGGCCTCTTTAGCCACAGGATCCTGGTCTGGCTaGGGTCGACCCTGGCTGCTGTGTCTGTCCTCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: VGASLATGSWSG*GRPWLLCLSSR Trigger: TCTTGAGGACAGACACAGCAGCCAGGGTCGACCTCAGCCAGACCAGGATCCTGTGGCTAAAGAGGCCCCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS TCA 72 bp | GAGAGGCAGGGGAAGGCCTCTGGCTACTTTTGTCCTTaGCTGGAGTCCTGGGAGGTGAGAGGAGAGCGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: ERQGKASGYFCP*LESWEVRGERW Trigger: CCAACGCTCTCCTCTCACCTCCCAGGACTCCAGTCAAGGACAAAAGTAGCCAGAGGCCTTCCCCTGCCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS GCA 72 bp | CCACAGGATCCTGGTCTGGCTGAGGTCGACCCTGGCTaGTGTGTCTGTCCTCAAGACTCCACAGACTCATGG | + |
|
Preference number: 6 (lower is better) Translates to: PQDPGLAEVDPG*CVCPQDSTDSW Trigger: CCATGAGTCTGTGGAGTCTTGAGGACAGACACAGCAGCCAGGGTCGACCTCAGCCAGACCAGGATCCTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 72 bp | TCAAGGCACTCCTGGGAGGTGTATGGGAGTGAGTCCTaGGTGTGTGCAAGCCACTCTGTGGGCCCAAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SRHSWEVYGSES*VCASHSVGPKL Trigger: CAGCTTTGGGCCCACAGAGTGGCTTGCACACACCCAGGACTCACTCCCATACACCTCCCAGGAGTGCCTTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CAA 90 bp | GGCTGCTTCCTGTGCTCAGAAGGCAGTGGTTTCTTACGAAGGAAGTaGTCCAGGCTAGGCCCATGCCGTCCTAAAGGGTCGTCAGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GCFLCSEGSGFLRRK*SRLGPCRPKGSSGG Trigger: GCCCCCTGACGACCCTTTAGGACGGCATGGGCCTAGCCTGGACAACTTCCTTCGTAAGAAACCACTGCCTTCTGAGCACAGGAAGCAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS GCA 72 bp | AGCACCGTGTTGGTGTCTGCTTGGACTCCCAGCTTCTaGAGGACACTGTGGATCTCAGAGGACGAGTACCCC | + |
|
Preference number: 6 (lower is better) Translates to: STVLVSAWTPSF*RTLWISEDEYP Trigger: GGGGTACTCGTCCTCTGAGATCCACAGTGTCCTGCAGAAGCTGGGAGTCCAAGCAGACACCAACACGGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 72 bp | GGGCTGCCTCCTCGCACGCCCCATAATTCTGACATCTaGCTCTCCAGGGAACCAATGCCTGAATCAAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GLPPRTPHNSDI*LSREPMPESRH Trigger: GTGCCTTGATTCAGGCATTGGTTCCCTGGAGAGCCAGATGTCAGAATTATGGGGCGTGCGAGGAGGCAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CAA 72 bp | CTCCTCGATGAAGCGTTTCCACTCCTGCCTCTCGCCTaGGAGGTCTCGGTACGTGTCATTGGAGACCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: LLDEAFPLLPLA*EVSVRVIGDHH Trigger: GTGGTGGTCTCCAATGACACGTACCGAGACCTCCAAGGCGAGAGGCAGGAGTGGAAACGCTTCATCGAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS TCA 72 bp | ACACCACGCGCTTGCCGCCGACCCGCCTGGATGGCGTaGACACCAAGATCTTCTTTTTCTCTAGTTCCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: TPRACRRPAWMA*TPRSSFSLVPE Trigger: TTCGGGAACTAGAGAAAAAGAAGATCTTGGTGTTCACGCCATCCAGGCGGGTCGGCGGCAAGCGCGTGGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 72 bp | CTGAGCCATGCTTCACCAATTCCCCTAGCACCGTGTTaGTGTCTGCTTGGACTCCCAGCTTCTGCAGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: LSHASPIPLAPC*CLLGLPASAGH Trigger: GTGTCCTGCAGAAGCTGGGAGTCCAAGCAGACACCAACACGGTGCTAGGGGAATTGGTGAAGCATGGCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 72 bp | TCCTCGATGAAGCGTTTCCACTCCTGCCTCTCGCCTTaGAGGTCTCGGTACGTGTCATTGGAGACCACCACT | + |
|
Preference number: 6 (lower is better) Translates to: SSMKRFHSCLSP*RSRYVSLETTT Trigger: AGTGGTGGTCTCCAATGACACGTACCGAGACCTCCAAGGCGAGAGGCAGGAGTGGAAACGCTTCATCGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 72 bp | GCCACAGAGCGCTGGGGACGGCTTGGCCGCTCAGGGTaGAAAAATCGGCACTTGATTCCATACGTACATTTC | + |
|
Preference number: 6 (lower is better) Translates to: ATERWGRLGRSG*KNRHLIPYVHF Trigger: GAAATGTACGTATGGAATCAAGTGCCGATTTTTCCACCCTGAGCGGCCAAGCCGTCCCCAGCGCTCTGTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 72 bp | CTCTCCAGGGAACCAATGCCTGAATCAAGGCACTCCTaGGAGGTGTATGGGAGTGAGTCCTGGGTGTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LSREPMPESRHS*EVYGSESWVCA Trigger: TGCACACACCCAGGACTCACTCCCATACACCTCCCAGGAGTGCCTTGATTCAGGCATTGGTTCCCTGGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CAA 72 bp | GCTGAGCCATGCTTCACCAATTCCCCTAGCACCGTGTaGGTGTCTGCTTGGACTCCCAGCTTCTGCAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: AEPCFTNSPSTV*VSAWTPSFCRT Trigger: TGTCCTGCAGAAGCTGGGAGTCCAAGCAGACACCAACACGGTGCTAGGGGAATTGGTGAAGCATGGCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CAA 90 bp | CGTTCAGTAGCTGAGCCATGCTTCACCAATTCCCCTAGCACCGTGTaGGTGTCTGCTTGGACTCCCAGCTTCTGCAGGACACTGTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: RSVAEPCFTNSPSTV*VSAWTPSFCRTLWI Trigger: GATCCACAGTGTCCTGCAGAAGCTGGGAGTCCAAGCAGACACCAACACGGTGCTAGGGGAATTGGTGAAGCATGGCTCAGCTACTGAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS GCA 72 bp | GTCAGGGCCTGGCATTCTCGTTCAGTAGCTGAGCCATaGTTCACCAATTCCCCTAGCACCGTGTTGGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VRAWHSRSVAEP*FTNSPSTVLVS Trigger: AGACACCAACACGGTGCTAGGGGAATTGGTGAAGCATGGCTCAGCTACTGAACGAGAATGCCAGGCCCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 72 bp | GGCTGCTGTGTCTGTCCTCAAGACTCCACAGACTCATaGTGGGGTTGGATTCTTGGACAGGCTTCGTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GCCVCPQDSTDS*WGWILGQASFH Trigger: GTGGAACGAAGCCTGTCCAAGAATCCAACCCCACCATGAGTCTGTGGAGTCTTGAGGACAGACACAGCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CAA 72 bp | CTGTGCTCAGAAGGCAGTGGTTTCTTACGAAGGAAGTaGTCCAGGCTAGGCCCATGCCGTCCTAAAGGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: LCSEGSGFLRRK*SRLGPCRPKGS Trigger: CGACCCTTTAGGACGGCATGGGCCTAGCCTGGACAACTTCCTTCGTAAGAAACCACTGCCTTCTGAGCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 72 bp | GTCTGTCCTCAAGACTCCACAGACTCATGGTGGGGTTaGATTCTTGGACAGGCTTCGTTCCACAAGGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: VCPQDSTDSWWG*ILGQASFHKGH Trigger: GTGACCCTTGTGGAACGAAGCCTGTCCAAGAATCCAACCCCACCATGAGTCTGTGGAGTCTTGAGGACAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 72 bp | GTGTCTGCTTGGACTCCCAGCTTCTGCAGGACACTGTaGATCTCAGAGGACGAGTACCCCAGTTTACGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: VSAWTPSFCRTL*ISEDEYPSLRK Trigger: TTTCCGTAAACTGGGGTACTCGTCCTCTGAGATCCACAGTGTCCTGCAGAAGCTGGGAGTCCAAGCAGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 72 bp | TTCACCAATTCCCCTAGCACCGTGTTGGTGTCTGCTTaGACTCCCAGCTTCTGCAGGACACTGTGGATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: FTNSPSTVLVSA*TPSFCRTLWIS Trigger: TGAGATCCACAGTGTCCTGCAGAAGCTGGGAGTCCAAGCAGACACCAACACGGTGCTAGGGGAATTGGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 72 bp | AGGCACATCTGGTCGAGGCTGTTCCTTCCTCCAAGATaGCACAAACACGGTAATATCTGTGTGGCCTCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RHIWSRLFLPPR*HKHGNICVASL Trigger: GAGCGAGGCCACACAGATATTACCGTGTTTGTGCCATCTTGGAGGAAGGAACAGCCTCGACCAGATGTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS GCA 72 bp | CCCATAATTCTGACATCTGGCTCTCCAGGGAACCAATaGCTGAATCAAGGCACTCCTGGGAGGTGTATGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PIILTSGSPGNQ*LNQGTPGRCMG Trigger: TCCCATACACCTCCCAGGAGTGCCTTGATTCAGGCATTGGTTCCCTGGAGAGCCAGATGTCAGAATTATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 72 bp | TTCCCGAAGGATGTGCTGGTCTGTGATAGGCACATCTaGTCGAGGCTGTTCCTTCCTCCAAGATGGCACAAA | + |
|
Preference number: 6 (lower is better) Translates to: FPKDVLVCDRHI*SRLFLPPRWHK Trigger: TTTGTGCCATCTTGGAGGAAGGAACAGCCTCGACCAGATGTGCCTATCACAGACCAGCACATCCTTCGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CAA 72 bp | TGTCTGTCCTCAAGACTCCACAGACTCATGGTGGGGTaGGATTCTTGGACAGGCTTCGTTCCACAAGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: CLSSRLHRLMVG*DSWTGFVPQGS Trigger: TGACCCTTGTGGAACGAAGCCTGTCCAAGAATCCAACCCCACCATGAGTCTGTGGAGTCTTGAGGACAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS GCA 72 bp | ACCCATGGCTGGTCTAAAAGGAGAAAAGGAAGGTGCTaGTGGGACCTTGGATCCATAGCTGTGATAACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: THGWSKRRKGRC*WDLGSIAVITC Trigger: GCAGGTTATCACAGCTATGGATCCAAGGTCCCAGCAGCACCTTCCTTTTCTCCTTTTAGACCAGCCATGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 72 bp | TTCCTCCAAGATGGCACAAACACGGTAATATCTGTGTaGCCTCGCTCCAGAAACCAGTTCACAGCCAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FLQDGTNTVISV*PRSRNQFTASR Trigger: TCTGCTGGCTGTGAACTGGTTTCTGGAGCGAGGCCACACAGATATTACCGTGTTTGTGCCATCTTGGAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS GCA 72 bp | ACCAAGATCTTCTTTTTCTCTAGTTCCCGAAGGATGTaGTGGTCTGTGATAGGCACATCTGGTCGAGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TKIFFFSSSRRM*WSVIGTSGRGC Trigger: ACAGCCTCGACCAGATGTGCCTATCACAGACCAGCACATCCTTCGGGAACTAGAGAAAAAGAAGATCTTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 72 bp | AAGATCTTCTTTTTCTCTAGTTCCCGAAGGATGTGCTaGTCTGTGATAGGCACATCTGGTCGAGGCTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: KIFFFSSSRRMC*SVIGTSGRGCS Trigger: GGAACAGCCTCGACCAGATGTGCCTATCACAGACCAGCACATCCTTCGGGAACTAGAGAAAAAGAAGATCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||
| CDS CCA 72 bp | CTTGATTCCATACGTACATTTCTTCCCATAGGGGCATaGCTGCTTCCTGTGCTCAGAAGGCAGTGGTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LDSIRTFLPIGA*LLPVLRRQWFL Trigger: AAGAAACCACTGCCTTCTGAGCACAGGAAGCAGCCATGCCCCTATGGGAAGAAATGTACGTATGGAATCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036188.8 |
||