Pregenerated sensors for ZC3H11A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000116275Ensembl transcript IDs: ENSMUST00000027736.13, ENSMUST00000191896.6, ENSMUST00000195424.6, ENSMUST00000195669.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATTACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTaGACAAAACAGTTATTTATCAAGGGATGTAAAAGATCCGACCCC | + |
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Preference number: 1 (lower is better) Translates to: HYRTFFSKMLNNGSK*TKQLFIKGCKRSDP Trigger: GGGGTCGGATCTTTTACATCCCTTGATAAATAACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGTAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| 3UTR CCA 72 bp | TCTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTaGAGAGAAGGGCATTACAGAACTTTCTTCTCAAAG | + |
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Preference number: 3 (lower is better) Translates to: SRAPFHLELSLR*REGHYRTFFSK Trigger: CTTTGAGAAGAAAGTTCTGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| 3UTR CCA 72 bp | ACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTaGACAAAACAGTTATTTATCAAGGGATGTAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: TFFSKMLNNGSK*TKQLFIKGCKR Trigger: TCTTTTACATCCCTTGATAAATAACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR TCA 90 bp | CTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTACAATGCCGAGTGACGCCTaGTACAGCAGTGAGCACCGG | + |
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Preference number: 4 (lower is better) Translates to: LVHRFIWSSVSGGEKGITMPSDA*YSSEHR Trigger: CCGGTGCTCACTGCTGTATCAGGCGTCACTCGGCAT...TGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR TCA 90 bp | CTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTACACTCCCCTTTCTGGGATaGCTCCACGGGGAGCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: LVHRFIWSSVSGGEKGITLPFLG*LHGEPF Trigger: AAACGGCTCCCCGTGGAGTCATCCCAGAAAGGGGAG...TGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| 3UTR CAA 72 bp | CCTCGAGGACCACTGAGTTCTCGTGCACCGTTTCATTaGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTAC | + |
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Preference number: 4 (lower is better) Translates to: PRGPLSSRAPFH*ELSLRWREGHY Trigger: GTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAGAACTCAGTGGTCCTCGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR GCA 90 bp | CTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTACAGCAGGGCAGGTGTCTTaGTTTCATCACCCTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LVHRFIWSSVSGGEKGITAGQVS*FHHPPQ Trigger: CTGAGGAGGGTGATGAAAGCAAGACACCTGCCCTGC...TGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CCA 90 bp | CTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTACACCACAGCTGCTTTCTTaGTGGGGCTTTCCTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: LVHRFIWSSVSGGEKGITPQLLS*WGFPAG Trigger: TCCTGCAGGAAAGCCCCACCAAGAAAGCAGCTGTGG...TGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CCA 90 bp | CTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTACAGGTTTTGTTGCCGTCTaGGATGAGGAAGGGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LVHRFIWSSVSGGEKGITGFVAV*DEEGPE Trigger: CTCTGGCCCTTCCTCATCCCAGACGGCAACAAAACC...TGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CCA 90 bp | CTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTACAGGTTCCGAAGCAGCTTaGGCTGAAGACAGCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: LVHRFIWSSVSGGEKGITGSEAA*AEDSTE Trigger: TTCTGTGCTGTCTTCAGCCCAAGCTGCTTCGGAACC...TGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR TCA 90 bp | CTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTACAGAGCTGAGACAACCTTaGCCACAGATGGCTTCACAT | + |
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Preference number: 4 (lower is better) Translates to: LVHRFIWSSVSGGEKGITELRQP*PQMASH Trigger: ATGTGAAGCCATCTGTGGTCAAGGTTGTCTCAGCTC...TGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR TCA 90 bp | CTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTACAGACAATTTGCTCTGTTaGACTGTGAGCTGGCTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVHRFIWSSVSGGEKGITDNLLC*TVSWLV Trigger: GACTAGCCAGCTCACAGTTCAACAGAGCAAATTGTC...TGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR TCA 90 bp | CTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTACAGCTGGGAACGTTTTCTaGGCTCTCTACTTTCATTAC | + |
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Preference number: 4 (lower is better) Translates to: LVHRFIWSSVSGGEKGITAGNVF*ALYFHY Trigger: GTAATGAAAGTAGAGAGCTCAGAAAACGTTCCCAGC...TGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR TCA 90 bp | CTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTACAGGTTTTGATCCGCACTaGAGAAGAACTTTTTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: LVHRFIWSSVSGGEKGITGFDPH*RRTFCP Trigger: GGGACAAAAAGTTCTTCTTCAGTGCGGATCAAAACC...TGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR TCA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTATGCCGAGTGACGCCTaGTACAGCAGTGAGCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: TELSSQRCSTMAASGQNSMPSDA*YSSEHR Trigger: CCGGTGCTCACTGCTGTATCAGGCGTCACTCGGCAT...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR TCA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTCTCCCCTTTCTGGGATaGCTCCACGGGGAGCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: TELSSQRCSTMAASGQNSLPFLG*LHGEPF Trigger: AAACGGCTCCCCGTGGAGTCATCCCAGAAAGGGGAG...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR TCA 90 bp | CTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTACATTGTCAATTTCCATGTaGCGAAATCTGCACACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVHRFIWSSVSGGEKGITLSISM*RNLHTC Trigger: ACAGGTGTGCAGATTTCGTCACATGGAAATTGACAA...TGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR TCA 90 bp | CATTACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAATGTTGCCGTCTGGGATaGGGAAGGGCCAGAGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: HYRTFFSKMLNNGSKWTKCCRLG*GRARAF Trigger: GAAGGCTCTGGCCCTTCCTCATCCCAGACGGCAACA...TTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGTAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR GCA 90 bp | CTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTACAGTCACATCTGTTGACTaGAAGTTTTGTGGGATCACT | + |
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Preference number: 4 (lower is better) Translates to: LVHRFIWSSVSGGEKGITVTSVD*KFCGIT Trigger: AGTGATCCCACAAAACTTGCAGTCAACAGATGTGAC...TGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CCA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTTCTACCTCCCCTTTCTaGGATGACTCCACGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TELSSQRCSTMAASGQNSSTSPF*DDSTGS Trigger: GCTCCCCGTGGAGTCATCCCAGAAAGGGGAGGTAGA...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR TCA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTCGAAGCAGCTTGGGCTaGAGACAGCACAGAACTGTC | + |
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Preference number: 4 (lower is better) Translates to: TELSSQRCSTMAASGQNSRSSLG*RQHRTV Trigger: GACAGTTCTGTGCTGTCTTCAGCCCAAGCTGCTTCG...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR GCA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTGCAGGGCAGGTGTCTTaGTTTCATCACCCTCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: TELSSQRCSTMAASGQNSAGQVS*FHHPPQ Trigger: CTGAGGAGGGTGATGAAAGCAAGACACCTGCCCTGC...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR GCA 90 bp | CATTACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAAAGACCTGGCTCTTCCTaGAGGCTCCTCTGGTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: HYRTFFSKMLNNGSKWTKRPGSS*RLLWLS Trigger: GGACAACCAGAGGAGCCTGCAGGAAGAGCCAGGTCT...TTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGTAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CCA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTATGGACGTCAGGAGATaGCTGCAGGGCAGGTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: TELSSQRCSTMAASGQNSMDVRR*LQGRCL Trigger: AAGACACCTGCCCTGCAGCCATCTCCTGACGTCCAT...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CCA 90 bp | CTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTACATTGTGGGATCACTTATaGTCTCATCTGAAGTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: LVHRFIWSSVSGGEKGITLWDHL*SHLKSH Trigger: ATGAGACTTCAGATGAGACCATAAGTGATCCCACAA...TGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CCA 90 bp | CATTACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAATCTACCTCCCCTTTCTaGGATGACTCCACGGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: HYRTFFSKMLNNGSKWTKSTSPF*DDSTGS Trigger: GCTCCCCGTGGAGTCATCCCAGAAAGGGGAGGTAGA...TTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGTAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CCA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTGGTTTTGTTGCCGTCTaGGATGAGGAAGGGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: TELSSQRCSTMAASGQNSGFVAV*DEEGPE Trigger: CTCTGGCCCTTCCTCATCCCAGACGGCAACAAAACC...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR TCA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTCACCTTGCTTTAAACTaGCTCCAGGTTTGCGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: TELSSQRCSTMAASGQNSHLALN*LQVCGQ Trigger: CTGCCCGCAAACCTGGAGTCAGTTTAAAGCAAGGTG...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR TCA 90 bp | CATTACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACGAAGCAGCTTGGGCTaGAGACAGCACAGAACTGTC | + |
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Preference number: 4 (lower is better) Translates to: HYRTFFSKMLNNGSKWTKRSSLG*RQHRTV Trigger: GACAGTTCTGTGCTGTCTTCAGCCCAAGCTGCTTCG...TTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGTAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR GCA 90 bp | CATTACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAAACGTCAGGAGATGGCTaGAGGGCAGGTGTCTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: HYRTFFSKMLNNGSKWTKTSGDG*RAGVLL Trigger: AAGCAAGACACCTGCCCTGCAGCCATCTCCTGACGT...TTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGTAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CCA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTGGTTCCGAAGCAGCTTaGGCTGAAGACAGCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: TELSSQRCSTMAASGQNSGSEAA*AEDSTE Trigger: TTCTGTGCTGTCTTCAGCCCAAGCTGCTTCGGAACC...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR TCA 90 bp | CATTACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACACCTTGCTTTAAACTaGCTCCAGGTTTGCGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: HYRTFFSKMLNNGSKWTKHLALN*LQVCGQ Trigger: CTGCCCGCAAACCTGGAGTCAGTTTAAAGCAAGGTG...TTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGTAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR TCA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTATCTCCTCGCACAGATaGCAAGGCTGCTTTCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: TELSSQRCSTMAASGQNSISSHR*QGCFLL Trigger: AAGGAGAAAGCAGCCTTGTCATCTGTGCGAGGAGAT...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR TCA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTGCTGTCAATCATCTCTaGGAGCTCAAGCAGAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: TELSSQRCSTMAASGQNSAVNHL*ELKQKV Trigger: GACCTTCTGCTTGAGCTCTCAGAGATGATTGACAGC...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR GCA 90 bp | CATTACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAAGACAACAGCCACAGCTaGTTTCTTGGTGGGGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: HYRTFFSKMLNNGSKWTKDNSHS*FLGGAF Trigger: GAAAGCCCCACCAAGAAAGCAGCTGTGGCTGTTGTC...TTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGTAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR TCA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTACTATCACCACCCACTaGAAGTTTTCGTTTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: TELSSQRCSTMAASGQNSTITTH*KFSFPQ Trigger: CTGGGGAAACGAAAACTTTCAGTGGGTGGTGATAGT...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR TCA 90 bp | CATTACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAAGAGCTGAGACAACCTTaGCCACAGATGGCTTCACAT | + |
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Preference number: 4 (lower is better) Translates to: HYRTFFSKMLNNGSKWTKELRQP*PQMASH Trigger: ATGTGAAGCCATCTGTGGTCAAGGTTGTCTCAGCTC...TTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGTAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR TCA 90 bp | CATTACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAAGCTGTCAATCATCTCTaGGAGCTCAAGCAGAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: HYRTFFSKMLNNGSKWTKAVNHL*ELKQKV Trigger: GACCTTCTGCTTGAGCTCTCAGAGATGATTGACAGC...TTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGTAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR TCA 90 bp | CATTACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAAGACAATTTGCTCTGTTaGACTGTGAGCTGGCTAGTC | + |
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Preference number: 4 (lower is better) Translates to: HYRTFFSKMLNNGSKWTKDNLLC*TVSWLV Trigger: GACTAGCCAGCTCACAGTTCAACAGAGCAAATTGTC...TTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGTAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR TCA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTGCTGGGAACGTTTTCTaGGCTCTCTACTTTCATTAC | + |
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Preference number: 4 (lower is better) Translates to: TELSSQRCSTMAASGQNSAGNVF*ALYFHY Trigger: GTAATGAAAGTAGAGAGCTCAGAAAACGTTCCCAGC...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR GCA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTCCATGTGACGAAATCTaGACACCTGTCGAAAACAAC | + |
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Preference number: 4 (lower is better) Translates to: TELSSQRCSTMAASGQNSPCDEI*TPVENN Trigger: GTTGTTTTCGACAGGTGTGCAGATTTCGTCACATGG...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR TCA 90 bp | CATTACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAAGGTTTTGATCCGCACTaGAGAAGAACTTTTTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: HYRTFFSKMLNNGSKWTKGFDPH*RRTFCP Trigger: GGGACAAAAAGTTCTTCTTCAGTGCGGATCAAAACC...TTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGTAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR GCA 90 bp | CATTACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAAGTCACATCTGTTGACTaGAAGTTTTGTGGGATCACT | + |
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Preference number: 4 (lower is better) Translates to: HYRTFFSKMLNNGSKWTKVTSVD*KFCGIT Trigger: AGTGATCCCACAAAACTTGCAGTCAACAGATGTGAC...TTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGTAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CCA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTCACAGAACTGTCTTTTaGGTTTTCTGTCTCAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: TELSSQRCSTMAASGQNSHRTVF*VFCLRH Trigger: ATGTCTGAGACAGAAAACCCAAAAGACAGTTCTGTG...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CCA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTACCTCGCTCTTTCTTTaGTGCTTTATCAATGTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TELSSQRCSTMAASGQNSTSLFL*CFINVS Trigger: ACTAACATTGATAAAGCACCAAAGAAAGAGCGAGGT...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CCA 90 bp | CATTACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAATTGTGGGATCACTTATaGTCTCATCTGAAGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HYRTFFSKMLNNGSKWTKLWDHL*SHLKSH Trigger: ATGAGACTTCAGATGAGACCATAAGTGATCCCACAA...TTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGTAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CCA 90 bp | CATTACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACACAGAACTGTCTTTTaGGTTTTCTGTCTCAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: HYRTFFSKMLNNGSKWTKHRTVF*VFCLRH Trigger: ATGTCTGAGACAGAAAACCCAAAAGACAGTTCTGTG...TTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGTAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CCA 90 bp | CATTACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAAACCTCGCTCTTTCTTTaGTGCTTTATCAATGTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: HYRTFFSKMLNNGSKWTKTSLFL*CFINVS Trigger: ACTAACATTGATAAAGCACCAAAGAAAGAGCGAGGT...TTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGTAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | CTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTACAGCCACAGCTGCTTTCTaGGTGGGGCTTTCCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LVHRFIWSSVSGGEKGITATAAF*VGLSCR Trigger: CCTGCAGGAAAGCCCCACCAAGAAAGCAGCTGTGGC...TGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | CTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTACATTTACACCTGCTCTCTaGGTGATGCGGAGCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVHRFIWSSVSGGEKGITFTPAL*VMRSSL Trigger: GAGGCTGCTCCGCATCACCAAGAGAGCAGGTGTAAA...TGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS CCA 90 bp | TCTCCTTCTCAGGGCCTGGATTGGGCTGAGGCTGCTGTAAAACACTaGAAACTCCCGAGGAGCCTTCACCTTGCTTCTTGGATTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPSQGLDWAEAAVKH*KLPRSLHLASWIFP Trigger: AGGAAAAATCCAAGAAGCAAGGTGAAGGCTCCTCGGGAGTTTCCAGTGTTTTACAGCAGCCTCAGCCCAATCCAGGCCCTGAGAAGGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 ENSMUST00000195669.2 |
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| CDS-3UTR CAA 90 bp | CTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTACATCCTCTGGTTGTCCTTaGCTAACAGCAACAGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVHRFIWSSVSGGEKGITSSGCP*LTATVG Trigger: GCCCACTGTTGCTGTTAGCAAAGGACAACCAGAGGA...TGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | CTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTACAGGAGCTGAGACAACCTaGACCACAGATGGCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LVHRFIWSSVSGGEKGITGAETT*TTDGFT Trigger: TGTGAAGCCATCTGTGGTCAAGGTTGTCTCAGCTCC...TGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | CTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTACAAAGGGCTCTTCTGGTTaGCTGGATAGAGTCACCATC | + |
|
Preference number: 5 (lower is better) Translates to: LVHRFIWSSVSGGEKGITKGSSG*LDRVTI Trigger: GATGGTGACTCTATCCAGCAAACCAGAAGAGCCCTT...TGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | CTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTACACGAGGAGCCTTCACCTaGCTTCTTGGATTTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LVHRFIWSSVSGGEKGITRGAFT*LLGFFL Trigger: AAGGAAAAATCCAAGAAGCAAGGTGAAGGCTCCTCG...TGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS GCA 90 bp | ATCACCCTCCTCAGAAAACTGATCATCGTCATCTTCATCATCATCTaGAGCGTTGATTACAACAGGCGGATGTGTGGGGCTGGGAACGTT | + |
|
Preference number: 5 (lower is better) Translates to: ITLLRKLIIVIFIII*SVDYNRRMCGAGNV Trigger: AACGTTCCCAGCCCCACACATCCGCCTGTTGTAATCAACGCTGCAGATGATGATGAAGATGACGATGATCAGTTTTCTGAGGAGGGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 ENSMUST00000195424.6 ENSMUST00000195669.2 |
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| CDS-3UTR CAA 90 bp | CTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTACATCTTCTGCCTTCAGTTaGGTTTGCAATTCTCCACGT | + |
|
Preference number: 5 (lower is better) Translates to: LVHRFIWSSVSGGEKGITSSAFS*VCNSPR Trigger: ACGTGGAGAATTGCAAACCAAACTGAAGGCAGAAGA...TGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTGCCACAGCTGCTTTCTaGGTGGGGCTTTCCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TELSSQRCSTMAASGQNSATAAF*VGLSCR Trigger: CCTGCAGGAAAGCCCCACCAAGAAAGCAGCTGTGGC...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | CTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTACAGCACAGAACTGTCTTTaGGGTTTTCTGTCTCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: LVHRFIWSSVSGGEKGITAQNCL*GFLSQT Trigger: TGTCTGAGACAGAAAACCCAAAAGACAGTTCTGTGC...TGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS GCA 90 bp | GTAATCCATTATGGACGTCAGGAGATGGCTGCAGGGCAGGTGTCTTaGTTTCATCACCCTCCTCAGAAAACTGATCATCGTCATCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: VIHYGRQEMAAGQVS*FHHPPQKTDHRHLH Trigger: ATGAAGATGACGATGATCAGTTTTCTGAGGAGGGTGATGAAAGCAAGACACCTGCCCTGCAGCCATCTCCTGACGTCCATAATGGATTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 ENSMUST00000195669.2 |
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| CDS-3UTR CAA 90 bp | CTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTACATGTGTGTGTTTCTCTTaGACAGTGTCACATCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LVHRFIWSSVSGGEKGITCVCFS*TVSHLL Trigger: CAACAGATGTGACACTGTCAAAGAGAAACACACACA...TGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | CTCGTGCACCGTTTCATTTGGAGCTCAGTCTCAGGTGGAGAGAAGGGCATTACAGGCTTCACATTTACTTaGGGTTTGACTTTACTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVHRFIWSSVSGGEKGITGFTFT*GLTLLL Trigger: GAGGAGTAAAGTCAAACCCAAAGTAAATGTGAAGCC...TGTAATGCCCTTCTCTCCACCTGAGACTGAGCTCCAAATGAAACGGTGCACGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTTGCAGGGCAGGTGTCTaGCTTTCATCACCCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TELSSQRCSTMAASGQNSCRAGV*LSSPSS Trigger: TGAGGAGGGTGATGAAAGCAAGACACCTGCCCTGCA...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTTTTACACCTGCTCTCTaGGTGATGCGGAGCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TELSSQRCSTMAASGQNSFTPAL*VMRSSL Trigger: GAGGCTGCTCCGCATCACCAAGAGAGCAGGTGTAAA...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | CATTACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAATGCAGGGCAGGTGTCTaGCTTTCATCACCCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HYRTFFSKMLNNGSKWTKCRAGV*LSSPSS Trigger: TGAGGAGGGTGATGAAAGCAAGACACCTGCCCTGCA...TTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGTAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | CATTACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAAAAACTGACTCCAGGTTaGCGGGCAGAAGCCACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: HYRTFFSKMLNNGSKWTKKLTPG*RAEATR Trigger: ACGAGTGGCTTCTGCCCGCAAACCTGGAGTCAGTTT...TTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGTAATG 46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTGGAGCTGAGACAACCTaGACCACAGATGGCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: TELSSQRCSTMAASGQNSGAETT*TTDGFT Trigger: TGTGAAGCCATCTGTGGTCAAGGTTGTCTCAGCTCC...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTAAGGGCTCTTCTGGTTaGCTGGATAGAGTCACCATC | + |
|
Preference number: 5 (lower is better) Translates to: TELSSQRCSTMAASGQNSKGSSG*LDRVTI Trigger: GATGGTGACTCTATCCAGCAAACCAGAAGAGCCCTT...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | CATTACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAATCCTCTGGTTGTCCTTaGCTAACAGCAACAGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HYRTFFSKMLNNGSKWTKSSGCP*LTATVG Trigger: GCCCACTGTTGCTGTTAGCAAAGGACAACCAGAGGA...TTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGTAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTTCATCATCTGCAGCGTaGATTACAACAGGCGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: TELSSQRCSTMAASGQNSSSSAA*ITTGGC Trigger: ACATCCGCCTGTTGTAATCAACGCTGCAGATGATGA...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | CATTACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAATCATCATCTGCAGCGTaGATTACAACAGGCGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: HYRTFFSKMLNNGSKWTKSSSAA*ITTGGC Trigger: ACATCCGCCTGTTGTAATCAACGCTGCAGATGATGA...TTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGTAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | CATTACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACGAGGAGCCTTCACCTaGCTTCTTGGATTTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HYRTFFSKMLNNGSKWTKRGAFT*LLGFFL Trigger: AAGGAAAAATCCAAGAAGCAAGGTGAAGGCTCCTCG...TTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGTAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTTGCCTTCAGTTTGGTTaGCAATTCTCCACGTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TELSSQRCSTMAASGQNSCLQFG*QFSTFL Trigger: CAGAAACGTGGAGAATTGCAAACCAAACTGAAGGCA...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTTCTTCTGCCTTCAGTTaGGTTTGCAATTCTCCACGT | + |
|
Preference number: 5 (lower is better) Translates to: TELSSQRCSTMAASGQNSSSAFS*VCNSPR Trigger: ACGTGGAGAATTGCAAACCAAACTGAAGGCAGAAGA...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTGCACAGAACTGTCTTTaGGGTTTTCTGTCTCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: TELSSQRCSTMAASGQNSAQNCL*GFLSQT Trigger: TGTCTGAGACAGAAAACCCAAAAGACAGTTCTGTGC...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTTGTGTGTGTTTCTCTTaGACAGTGTCACATCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TELSSQRCSTMAASGQNSCVCFS*TVSHLL Trigger: CAACAGATGTGACACTGTCAAAGAGAAACACACACA...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | ACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACAGTCTGAAGAAGAACTTTTaGTCCCTGATGGAGAATCAT | + |
|
Preference number: 5 (lower is better) Translates to: TELSSQRCSTMAASGQNSLKKNF*SLMENH Trigger: ATGATTCTCCATCAGGGACAAAAAGTTCTTCTTCAG...ACTGTTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | CATTACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAAGGCTTCACATTTACTTaGGGTTTGACTTTACTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HYRTFFSKMLNNGSKWTKGFTFT*GLTLLL Trigger: GAGGAGTAAAGTCAAACCCAAAGTAAATGTGAAGCC...TTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGTAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS-3UTR CAA 90 bp | CATTACAGAACTTTCTTCTCAAAGATGCTCAACAATGGCAGCAAGTGGACAAAACTGAAGAAGAACTTTTaGTCCCTGATGGAGAATCAT | + |
|
Preference number: 5 (lower is better) Translates to: HYRTFFSKMLNNGSKWTKLKKNF*SLMENH Trigger: ATGATTCTCCATCAGGGACAAAAAGTTCTTCTTCAG...TTTTGTCCACTTGCTGCCATTGTTGAGCATCTTTGAGAAGAAAGTTCTGTAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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| CDS CCA 72 bp | CAGGGCCTGGATTGGGCTGAGGCTGCTGTAAAACACTaGAAACTCCCGAGGAGCCTTCACCTTGCTTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: QGLDWAEAAVKH*KLPRSLHLASW Trigger: CCAAGAAGCAAGGTGAAGGCTCCTCGGGAGTTTCCAGTGTTTTACAGCAGCCTCAGCCCAATCCAGGCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 ENSMUST00000195669.2 |
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| CDS CCA 72 bp | CCAGAGCCTTCCGGGAGCAAGGGTTCCGAAGCAGCTTaGGCTGAAGACAGCACAGAACTGTCTTTTGGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: PEPSGSKGSEAA*AEDSTELSFGF Trigger: AAACCCAAAAGACAGTTCTGTGCTGTCTTCAGCCCAAGCTGCTTCGGAACCCTTGCTCCCGGAAGGCTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
||
| CDS TCA 72 bp | GCCTTCCGGGAGCAAGGGTTCCGAAGCAGCTTGGGCTaGAGACAGCACAGAACTGTCTTTTGGGTTTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: AFREQGFRSSLG*RQHRTVFWVFC Trigger: ACAGAAAACCCAAAAGACAGTTCTGTGCTGTCTTCAGCCCAAGCTGCTTCGGAACCCTTGCTCCCGGAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
||
| CDS GCA 72 bp | TATGGACGTCAGGAGATGGCTGCAGGGCAGGTGTCTTaGTTTCATCACCCTCCTCAGAAAACTGATCATCGT | + |
|
Preference number: 6 (lower is better) Translates to: YGRQEMAAGQVS*FHHPPQKTDHR Trigger: ACGATGATCAGTTTTCTGAGGAGGGTGATGAAAGCAAGACACCTGCCCTGCAGCCATCTCCTGACGTCCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 ENSMUST00000195424.6 ENSMUST00000195669.2 |
||
| CDS TCA 72 bp | GAAGTCTCATTAGCCTCCATCTTAGTCACACTGCTCTaGGGAGGGTCACCACTGTCTTCAAGGCCACATTTT | + |
|
Preference number: 6 (lower is better) Translates to: EVSLASILVTLL*GGSPLSSRPHF Trigger: AAAATGTGGCCTTGAAGACAGTGGTGACCCTCCTCAGAGCAGTGTGACTAAGATGGAGGCTAATGAGACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
||
| CDS GCA 72 bp | CTCAGAAAACTGATCATCGTCATCTTCATCATCATCTaGAGCGTTGATTACAACAGGCGGATGTGTGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LRKLIIVIFIII*SVDYNRRMCGA Trigger: AGCCCCACACATCCGCCTGTTGTAATCAACGCTGCAGATGATGATGAAGATGACGATGATCAGTTTTCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 ENSMUST00000195424.6 ENSMUST00000195669.2 |
||
| CDS CAA 90 bp | TCCTGCAGTCTCTGTGTGTGTTTCTCTTTGACAGTGTCACATCTGTaGACTGCAAGTTTTGTGGGATCACTTATGGTCTCATCTGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SCSLCVCFSLTVSHL*TASFVGSLMVSSEV Trigger: GACTTCAGATGAGACCATAAGTGATCCCACAAAACTTGCAGTCAACAGATGTGACACTGTCAAAGAGAAACACACACAGAGACTGCAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027736.13 ENSMUST00000191896.6 |
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