Pregenerated sensors for ZC3H10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039810Ensembl transcript IDs: ENSMUST00000040572.10, ENSMUST00000152539.8
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGCGAGGGTGTCAGAAGCCCTTGAATTGAAGTTACAGAAGTTGTaGGCCACCATGTGGGTGCTGGGAACTAAGCCTGGGTCCTCTGGA | + |
|
Preference number: 1 (lower is better) Translates to: CARVSEALELKLQKL*ATMWVLGTKPGSSG Trigger: TCCAGAGGACCCAGGCTTAGTTCCCAGCACCCACATGGTGGCCCACAACTTCTGTAACTTCAATTCAAGGGCTTCTGACACCCTCGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR TCA 90 bp | ATGCTCCTACCAAGTATATTCCTTGTAGTCTCTTGTCCTAGTTTCTaGGTGGCCCTTCGGACAGAGCCTGGGAGGGCTATGCAAGTGGGG | + |
|
Preference number: 1 (lower is better) Translates to: MLLPSIFLVVSCPSF*VALRTEPGRAMQVG Trigger: CCCCACTTGCATAGCCCTCCCAGGCTCTGTCCGAAGGGCCACTCAGAAACTAGGACAAGAGACTACAAGGAATATACTTGGTAGGAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR TCA 90 bp | AGTAGTGGGCACTGCCCTACAGATTTCCAGGCCAAGCGAGGTAAGTaGATGTTCCCCTACTCTGGGTTTGAGTACTATGGTCCCAGCCTT | + |
|
Preference number: 1 (lower is better) Translates to: SSGHCPTDFQAKRGK*MFPYSGFEYYGPSL Trigger: AAGGCTGGGACCATAGTACTCAAACCCAGAGTAGGGGAACATTCACTTACCTCGCTTGGCCTGGAAATCTGTAGGGCAGTGCCCACTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR TCA 90 bp | GTTGGCCTGGAGTTCACTATGTGGCTGACGCTGACCTCTATCTCTTaGTCCCCAGGTCCCATTCCCTTCCAAGTGCTAGGATTAGAGCAA | + |
|
Preference number: 1 (lower is better) Translates to: VGLEFTMWLTLTSIS*SPGPIPFQVLGLEQ Trigger: TTGCTCTAATCCTAGCACTTGGAAGGGAATGGGACCTGGGGATCAAGAGATAGAGGTCAGCGTCAGCCACATAGTGAACTCCAGGCCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR CCA 90 bp | AGGTCTTTGCTCCTGACCACTGACTTTCACTTTCTCCATCTTTCCTaGCTCTCTGTCTGGGTGGGGAATTTCTCTCTCCCACACCAGTGC | + |
|
Preference number: 1 (lower is better) Translates to: RSLLLTTDFHFLHLS*LSVWVGNFSLPHQC Trigger: GCACTGGTGTGGGAGAGAGAAATTCCCCACCCAGACAGAGAGCCAGGAAAGATGGAGAAAGTGAAAGTCAGTGGTCAGGAGCAAAGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR CCA 90 bp | AGAGCAAGGCCACCACATCTATCTTTGCCTAGCACTTCTGAAGCCTaGAAAGCTGAAAGCACTGGCCCTCAAGATGTGTTGGAGCAGAAA | + |
|
Preference number: 1 (lower is better) Translates to: RARPPHLSLPSTSEA*KAESTGPQDVLEQK Trigger: TTTCTGCTCCAACACATCTTGAGGGCCAGTGCTTTCAGCTTTCCAGGCTTCAGAAGTGCTAGGCAAAGATAGATGTGGTGGCCTTGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR TCA 90 bp | CTGCCATCAACAGCTTGGAGAGGCAACACCACCTGTCCTGCTGTTTaGATAAGGGCATCTGTTAACTACACAACATCCCATATCCCCGTT | + |
|
Preference number: 1 (lower is better) Translates to: LPSTAWRGNTTCPAV*IRASVNYTTSHIPV Trigger: AACGGGGATATGGGATGTTGTGTAGTTAACAGATGCCCTTATTCAAACAGCAGGACAGGTGGTGTTGCCTCTCCAAGCTGTTGATGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR TCA 90 bp | AATTTCTCTCTCCCACACCAGTGCTGGAATCTGTGCTGTTCACAATaGAAACAAGACCAGGGACACCCCCAACTTCCTATGAGAAAAGAC | + |
|
Preference number: 1 (lower is better) Translates to: NFSLPHQCWNLCCSQ*KQDQGHPQLPMRKD Trigger: GTCTTTTCTCATAGGAAGTTGGGGGTGTCCCTGGTCTTGTTTTCATTGTGAACAGCACAGATTCCAGCACTGGTGTGGGAGAGAGAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR TCA 90 bp | TTCCCCTACTCTGGGTTTGAGTACTATGGTCCCAGCCTTCCCAGGGGCCCAGGAACCCCCAACTTCCTATaGGAAAAGACAGTCCCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: FPYSGFEYYGPSLPRGPGTPNFL*EKTVPQ Trigger: CTGAGGGACTGTCTTTTCTCATAGGAAGTTGGGGGT...TCCTGGGCCCCTGGGAAGGCTGGGACCATAGTACTCAAACCCAGAGTAGGGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR CAA 90 bp | TATCCCAGAAAGTGCCTTCCCCAAACCAAAGCCCCATCTGGCCATTaGACATCTTTACCCTGCGTCCCAACTTACCCAGGCTACCTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: YPRKCLPQTKAPSGH*TSLPCVPTYPGYLG Trigger: CCCCAGGTAGCCTGGGTAAGTTGGGACGCAGGGTAAAGATGTCAAATGGCCAGATGGGGCTTTGGTTTGGGGAAGGCACTTTCTGGGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR CAA 90 bp | ATTTCCAGGCCAAGCGAGGTAAGTGAATGTTCCCCTACTCTGGGTTaGAGTACTATGGTCCCAGCCTTCCCAGGGGCCCAGGAGTGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: ISRPSEVSECSPTLG*STMVPAFPGAQECF Trigger: AAAACACTCCTGGGCCCCTGGGAAGGCTGGGACCATAGTACTCAAACCCAGAGTAGGGGAACATTCACTTACCTCGCTTGGCCTGGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR CAA 90 bp | ATCTGTGCGAGGGTGTCAGAAGCCCTTGAATTGAAGTTACAGAAGTaGTGGGCCACCATGTGGGTGCTGGGAACTAAGCCTGGGTCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: ICARVSEALELKLQK*WATMWVLGTKPGSS Trigger: AGAGGACCCAGGCTTAGTTCCCAGCACCCACATGGTGGCCCACAACTTCTGTAACTTCAATTCAAGGGCTTCTGACACCCTCGCACAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR TCA 90 bp | ATGGCTGGTAGCAGGTGTCTTTACCTGCTGGGCATCTCTCTAGTACACATACCGCAAGCCTGTTTGAGTTaGGGCCTGAAGGAGAGACCC | + |
|
Preference number: 2 (lower is better) Translates to: MAGSRCLYLLGISLVHIPQACLS*GLKERP Trigger: GGGTCTCTCCTTCAGGCCTCAACTCAAACAGGCTTG...CGGTATGTGTACTAGAGAGATGCCCAGCAGGTAAAGACACCTGCTACCAGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR CCA 90 bp | ATGGCTGGTAGCAGGTGTCTTTACCTGCTGGGCATCTCTCTAGTACACATACCGGTCCTAGTTTCTGAGTaGCCCTTCGGACAGAGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: MAGSRCLYLLGISLVHIPVLVSE*PFGQSL Trigger: CAGGCTCTGTCCGAAGGGCCACTCAGAAACTAGGAC...CGGTATGTGTACTAGAGAGATGCCCAGCAGGTAAAGACACCTGCTACCAGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR CCA 90 bp | AGCTATCTCTCCAGTCCCTCGTTCTCTTCTATGTATAACTCAGGCAGCATAGCACCTTCGGACAGAGCCTaGGAGGGCTATGCAAGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: SYLSSPSFSSMYNSGSIAPSDRA*EGYASG Trigger: CCCACTTGCATAGCCCTCCCAGGCTCTGTCCGAAGG...TGCTATGCTGCCTGAGTTATACATAGAAGAGAACGAGGGACTGGAGAGATAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR CCA 90 bp | GCGAGGGTGTCAGAAGCCCTTGAATTGAAGTTACAGAAGTTGTGGGCCACCATGTTTCTCCATCTTTCCTaGCTCTCTGTCTGGGTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: ARVSEALELKLQKLWATMFLHLS*LSVWVG Trigger: CCCCACCCAGACAGAGAGCCAGGAAAGATGGAGAAA...CATGGTGGCCCACAACTTCTGTAACTTCAATTCAAGGGCTTCTGACACCCTCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR CCA 90 bp | ATGGCTGGTAGCAGGTGTCTTTACCTGCTGGGCATCTCTCTAGTACACATACCGGGTAAGGCCTCAGGTTaGCCTGGAGTTCACTATGTG | + |
|
Preference number: 2 (lower is better) Translates to: MAGSRCLYLLGISLVHIPGKASG*PGVHYV Trigger: CACATAGTGAACTCCAGGCCAACCTGAGGCCTTACC...CGGTATGTGTACTAGAGAGATGCCCAGCAGGTAAAGACACCTGCTACCAGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR CAA 90 bp | TCCCTTCCAAGTGCTAGGATTAGAGCAAGGCCACCACATCTATCTTaGCCTAGCACTTCTGAAGCCTGGAAAGCTGAAAGCACTGGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: SLPSARIRARPPHLS*PSTSEAWKAESTGP Trigger: AGGGCCAGTGCTTTCAGCTTTCCAGGCTTCAGAAGTGCTAGGCAAAGATAGATGTGGTGGCCTTGCTCTAATCCTAGCACTTGGAAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR TCA 90 bp | AAATTGGAGGCTGGCTTACTCTACAAAGGGAATCCTGGGACAGCTGGGACTACATCTTGTCCTAGTTTCTaGGTGGCCCTTCGGACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: KLEAGLLYKGNPGTAGTTSCPSF*VALRTE Trigger: CTCTGTCCGAAGGGCCACTCAGAAACTAGGACAAGA...TGTAGTCCCAGCTGTCCCAGGATTCCCTTTGTAGAGTAAGCCAGCCTCCAATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR CCA 90 bp | ATGGCTGGTAGCAGGTGTCTTTACCTGCTGGGCATCTCTCTAGTACACATACCGAGCACTTCTGAAGCCTaGAAAGCTGAAAGCACTGGC | + |
|
Preference number: 2 (lower is better) Translates to: MAGSRCLYLLGISLVHIPSTSEA*KAESTG Trigger: GCCAGTGCTTTCAGCTTTCCAGGCTTCAGAAGTGCT...CGGTATGTGTACTAGAGAGATGCCCAGCAGGTAAAGACACCTGCTACCAGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR CAA 90 bp | GAGTGTTTTTGGGCCCCGAACCATCTGAAGGCTCATATGAGGTCTTaGCTCCTGACCACTGACTTTCACTTTCTCCATCTTTCCTGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: ECFWAPNHLKAHMRS*LLTTDFHFLHLSWL Trigger: GAGCCAGGAAAGATGGAGAAAGTGAAAGTCAGTGGTCAGGAGCAAAGACCTCATATGAGCCTTCAGATGGTTCGGGGCCCAAAAACACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR GCA 90 bp | GCTCATATGAGGTCTTTGCTCCTGACCACTGACTTTCACTTTCTCCATCTTTCCACACCAGCACAACCCTaGCTCAGGAGATGCTCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: AHMRSLLLTTDFHFLHLSTPAQP*LRRCSY Trigger: GTAGGAGCATCTCCTGAGGCAGGGTTGTGCTGGTGT...GGAAAGATGGAGAAAGTGAAAGTCAGTGGTCAGGAGCAAAGACCTCATATGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR GCA 90 bp | AAATTGGAGGCTGGCTTACTCTACAAAGGGAATCCTGGGACAGCTGGGACTACATTGACATCTTTACCCTaGGTCCCAACTTACCCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: KLEAGLLYKGNPGTAGTTLTSLP*VPTYPG Trigger: GCCTGGGTAAGTTGGGACGCAGGGTAAAGATGTCAA...TGTAGTCCCAGCTGTCCCAGGATTCCCTTTGTAGAGTAAGCCAGCCTCCAATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR CCA 90 bp | TGTGTTGGAGCAGAAAGACATAAACTGCCATCAACAGCTTGGAGAGGCAACACCTCCTGGCTCTCTGTCTaGGTGGGGAATTTCTCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: CVGAERHKLPSTAWRGNTSWLSV*VGNFSL Trigger: GAGAGAGAAATTCCCCACCCAGACAGAGAGCCAGGA...GGTGTTGCCTCTCCAAGCTGTTGATGGCAGTTTATGTCTTTCTGCTCCAACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR CCA 90 bp | AAATTGGAGGCTGGCTTACTCTACAAAGGGAATCCTGGGACAGCTGGGACTACATCAGGCAGCATAGCATaGCTGGTAGCAGGTGTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: KLEAGLLYKGNPGTAGTTSGSIA*LVAGVF Trigger: AAAGACACCTGCTACCAGCCATGCTATGCTGCCTGA...TGTAGTCCCAGCTGTCCCAGGATTCCCTTTGTAGAGTAAGCCAGCCTCCAATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR TCA 90 bp | TGTGTTGGAGCAGAAAGACATAAACTGCCATCAACAGCTTGGAGAGGCAACACCCTGTGCTGTTCACAATaGAAACAAGACCAGGGACAC | + |
|
Preference number: 2 (lower is better) Translates to: CVGAERHKLPSTAWRGNTLCCSQ*KQDQGH Trigger: GTGTCCCTGGTCTTGTTTTCATTGTGAACAGCACAG...GGTGTTGCCTCTCCAAGCTGTTGATGGCAGTTTATGTCTTTCTGCTCCAACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR TCA 90 bp | GGTAGCAGGTGTCTTTACCTGCTGGGCATCTCTCTAGTACACATACCGTCTTTCTTTGCTCCTGACCACTaGCTTTCACTTTCTCCATCT | + |
|
Preference number: 2 (lower is better) Translates to: GSRCLYLLGISLVHIPSFFAPDH*LSLSPS Trigger: AGATGGAGAAAGTGAAAGTCAGTGGTCAGGAGCAAA...GAAAGACGGTATGTGTACTAGAGAGATGCCCAGCAGGTAAAGACACCTGCTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR TCA 90 bp | AAATTGGAGGCTGGCTTACTCTACAAAGGGAATCCTGGGACAGCTGGGACTACACCTGGGAATAGCACATaGAGACAGAGACTAGAAACA | + |
|
Preference number: 2 (lower is better) Translates to: KLEAGLLYKGNPGTAGTTPGNST*RQRLET Trigger: TGTTTCTAGTCTCTGTCTTCATGTGCTATTCCCAGG...TGTAGTCCCAGCTGTCCCAGGATTCCCTTTGTAGAGTAAGCCAGCCTCCAATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR CCA 90 bp | AGCTATCTCTCCAGTCCCTCGTTCTCTTCTATGTATAACTCAGGCAGCATAGCACTCCCACACCAGTGCTaGAATCTGTGCTGTTCACAA | + |
|
Preference number: 2 (lower is better) Translates to: SYLSSPSFSSMYNSGSIALPHQC*NLCCSQ Trigger: TTGTGAACAGCACAGATTCCAGCACTGGTGTGGGAG...TGCTATGCTGCCTGAGTTATACATAGAAGAGAACGAGGGACTGGAGAGATAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR TCA 90 bp | ACCTTCTGGTCATGTATAGAGGCAGAGAAAGGATTAATACCCTTCCCATGTTATCTGACCTCTATCTCTTaGTCCCCAGGTCCCATTCCC | + |
|
Preference number: 2 (lower is better) Translates to: TFWSCIEAEKGLIPFPCYLTSIS*SPGPIP Trigger: GGGAATGGGACCTGGGGATCAAGAGATAGAGGTCAG...ATAACATGGGAAGGGTATTAATCCTTTCTCTGCCTCTATACATGACCAGAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR CCA 90 bp | AAATTGGAGGCTGGCTTACTCTACAAAGGGAATCCTGGGACAGCTGGGACTACAGAGTCAATACGTAACTaGAGATGTAACAGCCCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: KLEAGLLYKGNPGTAGTTESIRN*RCNSPV Trigger: TACTGGGCTGTTACATCTCCAGTTACGTATTGACTC...TGTAGTCCCAGCTGTCCCAGGATTCCCTTTGTAGAGTAAGCCAGCCTCCAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR TCA 90 bp | ACATACGTAAAACAGCATTTACCCATTTTAGAAGACTTGTATCTGCCTGGCATGCCCCATCTGGCCATTTaGCATCTTTACCCTGCGTCC | + |
|
Preference number: 2 (lower is better) Translates to: TYVKQHLPILEDLYLPGMPHLAI*HLYPAS Trigger: GGACGCAGGGTAAAGATGTCAAATGGCCAGATGGGG...CATGCCAGGCAGATACAAGTCTTCTAAAATGGGTAAATGCTGTTTTACGTATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR TCA 90 bp | AAAGCTGAAAGCACTGGCCCTCAAGATGTGTTGGAGCAGAAAGACATAAACTGCACCTGTCCTGCTGTTTaGATAAGGGCATCTGTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: KAESTGPQDVLEQKDINCTCPAV*IRASVN Trigger: GTTAACAGATGCCCTTATTCAAACAGCAGGACAGGT...GCAGTTTATGTCTTTCTGCTCCAACACATCTTGAGGGCCAGTGCTTTCAGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR CCA 90 bp | AAATTGGAGGCTGGCTTACTCTACAAAGGGAATCCTGGGACAGCTGGGACTACAGTTCTTTTATTTCTTTaGAAAGTAGTGGGCACTGCC | + |
|
Preference number: 2 (lower is better) Translates to: KLEAGLLYKGNPGTAGTTVLLFL*KVVGTA Trigger: GGCAGTGCCCACTACTTTCCAAAGAAATAAAAGAAC...TGTAGTCCCAGCTGTCCCAGGATTCCCTTTGTAGAGTAAGCCAGCCTCCAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR GCA 90 bp | AAAGCTGAAAGCACTGGCCCTCAAGATGTGTTGGAGCAGAAAGACATAAACTGCATGAGATCTACTTTCTaGTCCAATCTTCCCCAACAG | + |
|
Preference number: 2 (lower is better) Translates to: KAESTGPQDVLEQKDINCMRSTF*SNLPQQ Trigger: CTGTTGGGGAAGATTGGAGCAGAAAGTAGATCTCAT...GCAGTTTATGTCTTTCTGCTCCAACACATCTTGAGGGCCAGTGCTTTCAGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR TCA 72 bp | GCTCAAGTCTCCACTCCTGTGCAAGCCTGTTTGAGTTaGGGCCTGAAGGAGAGACCCCTCTCAAGAGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: AQVSTPVQACLS*GLKERPLSRVG Trigger: CCCCACTCTTGAGAGGGGTCTCTCCTTCAGGCCTCAACTCAAACAGGCTTGCACAGGAGTGGAGACTTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR TCA 72 bp | AGTGCCTTCCCCAAACCAAAGCCCCATCTGGCCATTTaGCATCTTTACCCTGCGTCCCAACTTACCCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SAFPKPKPHLAI*HLYPASQLTQA Trigger: AGCCTGGGTAAGTTGGGACGCAGGGTAAAGATGTCAAATGGCCAGATGGGGCTTTGGTTTGGGGAAGGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR TCA 72 bp | GAGTTCACTATGTGGCTGACGCTGACCTCTATCTCTTaGTCCCCAGGTCCCATTCCCTTCCAAGTGCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: EFTMWLTLTSIS*SPGPIPFQVLG Trigger: TCCTAGCACTTGGAAGGGAATGGGACCTGGGGATCAAGAGATAGAGGTCAGCGTCAGCCACATAGTGAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR GCA 72 bp | CCTCTCAAGAGTGGGGAGAACACACCAGCACAACCCTaGCTCAGGAGATGCTCCTACCAAGTATATTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: PLKSGENTPAQP*LRRCSYQVYSL Trigger: CAAGGAATATACTTGGTAGGAGCATCTCCTGAGGCAGGGTTGTGCTGGTGTGTTCTCCCCACTCTTGAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR GCA 72 bp | CCTATGAGAAAAGACAGTCCCTCAGTCCTTTCTCTCTaGCGGCTCAAGTCTCCACTCCTGTGCAAGCCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: PMRKDSPSVLSL*RLKSPLLCKPV Trigger: AACAGGCTTGCACAGGAGTGGAGACTTGAGCCGGCAGAGAGAAAGGACTGAGGGACTGTCTTTTCTCATAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR CAA 90 bp | AAATTGGAGGCTGGCTTACTCTACAAAGGGAATCCTGGGACAGCTGGGACTACAGCCCCATCTGGCCATTaGACATCTTTACCCTGCGTC | + |
|
Preference number: 3 (lower is better) Translates to: KLEAGLLYKGNPGTAGTTAPSGH*TSLPCV Trigger: GACGCAGGGTAAAGATGTCAAATGGCCAGATGGGGC...TGTAGTCCCAGCTGTCCCAGGATTCCCTTTGTAGAGTAAGCCAGCCTCCAATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR TCA 72 bp | CCAAGTATATTCCTTGTAGTCTCTTGTCCTAGTTTCTaGGTGGCCCTTCGGACAGAGCCTGGGAGGGCTATG | + |
|
Preference number: 3 (lower is better) Translates to: PSIFLVVSCPSF*VALRTEPGRAM Trigger: CATAGCCCTCCCAGGCTCTGTCCGAAGGGCCACTCAGAAACTAGGACAAGAGACTACAAGGAATATACTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR CCA 72 bp | CTCCTGACCACTGACTTTCACTTTCTCCATCTTTCCTaGCTCTCTGTCTGGGTGGGGAATTTCTCTCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LLTTDFHFLHLS*LSVWVGNFSLP Trigger: TGGGAGAGAGAAATTCCCCACCCAGACAGAGAGCCAGGAAAGATGGAGAAAGTGAAAGTCAGTGGTCAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR CCA 72 bp | CTTGAATTGAAGTTACAGAAGTTGTGGGCCACCATGTaGGTGCTGGGAACTAAGCCTGGGTCCTCTGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LELKLQKLWATM*VLGTKPGSSGR Trigger: TCTTCCAGAGGACCCAGGCTTAGTTCCCAGCACCCACATGGTGGCCCACAACTTCTGTAACTTCAATTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR TCA 72 bp | CACTGCCCTACAGATTTCCAGGCCAAGCGAGGTAAGTaGATGTTCCCCTACTCTGGGTTTGAGTACTATGGT | + |
|
Preference number: 3 (lower is better) Translates to: HCPTDFQAKRGK*MFPYSGFEYYG Trigger: ACCATAGTACTCAAACCCAGAGTAGGGGAACATTCACTTACCTCGCTTGGCCTGGAAATCTGTAGGGCAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR TCA 72 bp | GGGTCCTCTGGAAGAGCAGCCAGTGTTCTTAACCATTaGGCTATCTCTCCAGTCCCTCGTTCTCTTCTATGT | + |
|
Preference number: 3 (lower is better) Translates to: GSSGRAASVLNH*AISPVPRSLLC Trigger: ACATAGAAGAGAACGAGGGACTGGAGAGATAGCTCAATGGTTAAGAACACTGGCTGCTCTTCCAGAGGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR TCA 72 bp | GTATTATCTGTGCGAGGGTGTCAGAAGCCCTTGAATTaGAGTTACAGAAGTTGTGGGCCACCATGTGGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: VLSVRGCQKPLN*SYRSCGPPCGC Trigger: GCACCCACATGGTGGCCCACAACTTCTGTAACTTCAATTCAAGGGCTTCTGACACCCTCGCACAGATAATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR CCA 72 bp | CCACCACATCTATCTTTGCCTAGCACTTCTGAAGCCTaGAAAGCTGAAAGCACTGGCCCTCAAGATGTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: PPHLSLPSTSEA*KAESTGPQDVL Trigger: CAACACATCTTGAGGGCCAGTGCTTTCAGCTTTCCAGGCTTCAGAAGTGCTAGGCAAAGATAGATGTGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR CCA 72 bp | GGCTGGCTTACTCTACAAAGGGAATCCTGGGACAGCTaGGACTACACAGAGAAACCCTGTCTCAAAAACCAT | + |
|
Preference number: 3 (lower is better) Translates to: GWLTLQRESWDS*DYTEKPCLKNH Trigger: ATGGTTTTTGAGACAGGGTTTCTCTGTGTAGTCCCAGCTGTCCCAGGATTCCCTTTGTAGAGTAAGCCAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR TCA 72 bp | ACAGCTTGGAGAGGCAACACCACCTGTCCTGCTGTTTaGATAAGGGCATCTGTTAACTACACAACATCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: TAWRGNTTCPAV*IRASVNYTTSH Trigger: ATGGGATGTTGTGTAGTTAACAGATGCCCTTATTCAAACAGCAGGACAGGTGGTGTTGCCTCTCCAAGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR CAA 90 bp | ACATACGTAAAACAGCATTTACCCATTTTAGAAGACTTGTATCTGCCTGGCATGTCCCCTACTCTGGGTTaGAGTACTATGGTCCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: TYVKQHLPILEDLYLPGMSPTLG*STMVPA Trigger: GGCTGGGACCATAGTACTCAAACCCAGAGTAGGGGA...CATGCCAGGCAGATACAAGTCTTCTAAAATGGGTAAATGCTGTTTTACGTATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR-3UTR CAA 90 bp | ACATACGTAAAACAGCATTTACCCATTTTAGAAGACTTGTATCTGCCTGGCATGGGCCCTCAAGATGTGTaGGAGCAGAAAGACATAAAC | + |
|
Preference number: 3 (lower is better) Translates to: TYVKQHLPILEDLYLPGMGPQDV*EQKDIN Trigger: GTTTATGTCTTTCTGCTCCAACACATCTTGAGGGCC...CATGCCAGGCAGATACAAGTCTTCTAAAATGGGTAAATGCTGTTTTACGTATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR GCA 72 bp | AATATATGTTATTTTTATGTTCACTGGTGTTTTGCCTaGAGGTATTATCTGTGCGAGGGTGTCAGAAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: NICYFYVHWCFA*RYYLCEGVRSP Trigger: AGGGCTTCTGACACCCTCGCACAGATAATACCTGCAGGCAAAACACCAGTGAACATAAAAATAACATATATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR CCA 72 bp | TTGGCCTTAGTAACCCTTGAGTGTTTTAAAACCTTCTaGTCATGTATAGAGGCAGAGAAAGGATTAATACCC | + |
|
Preference number: 3 (lower is better) Translates to: LALVTLECFKTF*SCIEAEKGLIP Trigger: GGGTATTAATCCTTTCTCTGCCTCTATACATGACCAGAAGGTTTTAAAACACTCAAGGGTTACTAAGGCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR TCA 90 bp | GAGAACACACCAGCACAACCCTGCCTCAGGAGATGCTCCTACCAAGTATATTCCCCCTGGGCGATGGTCTaGGCCAGAGCGGCTGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: ENTPAQPCLRRCSYQVYSPWAMV*ARAADS Trigger: GCTGTCAGCCGCTCTGGCTCAGACCATCGCCCAGGG...GGAATATACTTGGTAGGAGCATCTCCTGAGGCAGGGTTGTGCTGGTGTGTTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR GCA 90 bp | GGTAGCAGGTGTCTTTACCTGCTGGGCATCTCTCTAGTACACATACCGTCTTTCAGGTGGCTCCCCCGCTaGCTGTCCCTGCCCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSRCLYLLGISLVHIPSFRWLPR*LSLPHW Trigger: CCAGTGGGGCAGGGACAGGCAGCGGGGGAGCCACCT...GAAAGACGGTATGTGTACTAGAGAGATGCCCAGCAGGTAAAGACACCTGCTACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR GCA 90 bp | GGTAGCAGGTGTCTTTACCTGCTGGGCATCTCTCTAGTACACATACCGTCTTTCGTGGGGGCCAGGGTCTaGTCAGTCGCGGGGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSRCLYLLGISLVHIPSFVGARV*SVAGAV Trigger: CACTGCCCCCGCGACTGAGCAGACCCTGGCCCCCAC...GAAAGACGGTATGTGTACTAGAGAGATGCCCAGCAGGTAAAGACACCTGCTACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CCA 90 bp | GGTAGCAGGTGTCTTTACCTGCTGGGCATCTCTCTAGTACACATACCGTCTTTCCTCGGGGTTCAGGTGTaGAGGTGGGGGCGGCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSRCLYLLGISLVHIPSFLGVQV*RWGRRS Trigger: GCTCCGCCGCCCCCACCTCCACACCTGAACCCCGAG...GAAAGACGGTATGTGTACTAGAGAGATGCCCAGCAGGTAAAGACACCTGCTACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR TCA 90 bp | GGTAGCAGGTGTCTTTACCTGCTGGGCATCTCTCTAGTACACATACCGTCTTTCCTGAGCCAGAGCGGCTaGCAGCGGCGTGATCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSRCLYLLGISLVHIPSFLSQSG*QRRDLG Trigger: CCCGAGATCACGCCGCTGTCAGCCGCTCTGGCTCAG...GAAAGACGGTATGTGTACTAGAGAGATGCCCAGCAGGTAAAGACACCTGCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR TCA 90 bp | GCGAGGGTGTCAGAAGCCCTTGAATTGAAGTTACAGAAGTTGTGGGCCACCATGTCTACAGATGGCATCTaGGGTGGCTCCCCCGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ARVSEALELKLQKLWATMSTDGI*GGSPAA Trigger: GGCAGCGGGGGAGCCACCTCAGATGCCATCTGTAGA...CATGGTGGCCCACAACTTCTGTAACTTCAATTCAAGGGCTTCTGACACCCTCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR GCA 90 bp | GGTAGCAGGTGTCTTTACCTGCTGGGCATCTCTCTAGTACACATACCGTCTTTCGGCCTCCACCGCTGCTaGCAGTGCCGTTGGCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSRCLYLLGISLVHIPSFGLHRC*QCRWHS Trigger: GCTATGCCAACGGCACTGGCAGCAGCGGTGGAGGCC...GAAAGACGGTATGTGTACTAGAGAGATGCCCAGCAGGTAAAGACACCTGCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR GCA 90 bp | AAATTGGAGGCTGGCTTACTCTACAAAGGGAATCCTGGGACAGCTGGGACTACACAGGGCCTCCACCGCTaGTGCCAGTGCCGTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLEAGLLYKGNPGTAGTTQGLHR*CQCRWH Trigger: ATGCCAACGGCACTGGCAGCAGCGGTGGAGGCCCTG...TGTAGTCCCAGCTGTCCCAGGATTCCCTTTGTAGAGTAAGCCAGCCTCCAATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR CAA 72 bp | CCAAGCGAGGTAAGTGAATGTTCCCCTACTCTGGGTTaGAGTACTATGGTCCCAGCCTTCCCAGGGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSEVSECSPTLG*STMVPAFPGAQ Trigger: CTGGGCCCCTGGGAAGGCTGGGACCATAGTACTCAAACCCAGAGTAGGGGAACATTCACTTACCTCGCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR GCA 90 bp | GGTAGCAGGTGTCTTTACCTGCTGGGCATCTCTCTAGTACACATACCGTCTTTCAGCCTCCACCTCCAGTaGCTCCTCCACCGCGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GSRCLYLLGISLVHIPSFSLHLQ*LLHREH Trigger: ATGCTCGCGGTGGAGGAGGCACTGGAGGTGGAGGCT...GAAAGACGGTATGTGTACTAGAGAGATGCCCAGCAGGTAAAGACACCTGCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR GCA 90 bp | GCTCATATGAGGTCTTTGCTCCTGACCACTGACTTTCACTTTCTCCATCTTTCCCGGGGGAGCAGCCGGTaGCCCTGTGGGAGCAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: AHMRSLLLTTDFHFLHLSRGSSR*PCGSNK Trigger: CTTGTTGCTCCCACAGGGGCACCGGCTGCTCCCCCG...GGAAAGATGGAGAAAGTGAAAGTCAGTGGTCAGGAGCAAAGACCTCATATGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CCA 90 bp | ATGGCTGGTAGCAGGTGTCTTTACCTGCTGGGCATCTCTCTAGTACACATACCGTGCTGCCAGTGCCGTTaGCATAGCTGTCCCGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MAGSRCLYLLGISLVHIPCCQCR*HSCPGQ Trigger: CTGACCGGGACAGCTATGCCAACGGCACTGGCAGCA...CGGTATGTGTACTAGAGAGATGCCCAGCAGGTAAAGACACCTGCTACCAGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CCA 90 bp | TGTGTTGGAGCAGAAAGACATAAACTGCCATCAACAGCTTGGAGAGGCAACACCGGGGAGCAGAGCCTGTaGAGCCTCCACCTCCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CVGAERHKLPSTAWRGNTGEQSL*SLHLQC Trigger: GCACTGGAGGTGGAGGCTCCACAGGCTCTGCTCCCC...GGTGTTGCCTCTCCAAGCTGTTGATGGCAGTTTATGTCTTTCTGCTCCAACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGAAAGCACTGGCCCTCAAGATGTGTTGGAGCAGAAAGACATAAACTGCCACTGGCCTCCTCACTaGCACCACCTCCAGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KAESTGPQDVLEQKDINCHWPPH*HHLQGL Trigger: GAGGCCCTGGAGGTGGTGGCAGTGAGGAGGCCAGTG...GCAGTTTATGTCTTTCTGCTCCAACACATCTTGAGGGCCAGTGCTTTCAGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGAAAGCACTGGCCCTCAAGATGTGTTGGAGCAGAAAGACATAAACTGCCGGAGCGGCAGGAGGTaGAGCATTAGTCGGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KAESTGPQDVLEQKDINCRSGRR*SISRGS Trigger: GCTCCCCCGACTAATGCTGCACCTCCTGCCGCTCCG...GCAGTTTATGTCTTTCTGCTCCAACACATCTTGAGGGCCAGTGCTTTCAGCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CCA 90 bp | AAATTGGAGGCTGGCTTACTCTACAAAGGGAATCCTGGGACAGCTGGGACTACAATCATGACGGCGTCCTaGGGGAGCAGAGCCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KLEAGLLYKGNPGTAGTTIMTAS*GSRACG Trigger: TCCACAGGCTCTGCTCCCCCAGGACGCCGTCATGAT...TGTAGTCCCAGCTGTCCCAGGATTCCCTTTGTAGAGTAAGCCAGCCTCCAATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR CAA 72 bp | GGAGTTCACTATGTGGCTGACGCTGACCTCTATCTCTaGATCCCCAGGTCCCATTCCCTTCCAAGTGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVHYVADADLYL*IPRSHSLPSAR Trigger: CCTAGCACTTGGAAGGGAATGGGACCTGGGGATCAAGAGATAGAGGTCAGCGTCAGCCACATAGTGAACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR GCA 90 bp | AGCTATCTCTCCAGTCCCTCGTTCTCTTCTATGTATAACTCAGGCAGCATAGCACACCGCTGCTGCCAGTaGCGTTGGCATAGCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SYLSSPSFSSMYNSGSIAHRCCQ*RWHSCP Trigger: GGGACAGCTATGCCAACGGCACTGGCAGCAGCGGTG...TGCTATGCTGCCTGAGTTATACATAGAAGAGAACGAGGGACTGGAGAGATAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR GCA 90 bp | GCGAGGGTGTCAGAAGCCCTTGAATTGAAGTTACAGAAGTTGTGGGCCACCATGAGCAGGTTGCTGACCTaGTTCTTCAGCTCCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: ARVSEALELKLQKLWATMSRLLT*FFSSST Trigger: CGTGGAGGAGCTGAAGAAGCAGGTCAGCAACCTGCT...CATGGTGGCCCACAACTTCTGTAACTTCAATTCAAGGGCTTCTGACACCCTCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CCA 90 bp | AGCTATCTCTCCAGTCCCTCGTTCTCTTCTATGTATAACTCAGGCAGCATAGCAAGATGGCATCTGAGGTaGCTCCCCCGCTGCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SYLSSPSFSSMYNSGSIARWHLR*LPRCLS Trigger: GGACAGGCAGCGGGGGAGCCACCTCAGATGCCATCT...TGCTATGCTGCCTGAGTTATACATAGAAGAGAACGAGGGACTGGAGAGATAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CCA 90 bp | GAGAACACACCAGCACAACCCTGCCTCAGGAGATGCTCCTACCAAGTATATTCCTCCTCCTTGGAGCCGTaGATGAAACGACAGTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ENTPAQPCLRRCSYQVYSSSLEP*MKRQLG Trigger: CCCCAACTGTCGTTTCATCCACGGCTCCAAGGAGGA...GGAATATACTTGGTAGGAGCATCTCCTGAGGCAGGGTTGTGCTGGTGTGTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CCA 90 bp | AAATTGGAGGCTGGCTTACTCTACAAAGGGAATCCTGGGACAGCTGGGACTACACCTGGCTGCTCAGAGTaGTATGAGTCTGGGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: KLEAGLLYKGNPGTAGTTPGCSE*YESGRC Trigger: GCATCGCCCAGACTCATACCACTCTGAGCAGCCAGG...TGTAGTCCCAGCTGTCCCAGGATTCCCTTTGTAGAGTAAGCCAGCCTCCAATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CCA 90 bp | GGTAGCAGGTGTCTTTACCTGCTGGGCATCTCTCTAGTACACATACCGTCTTTCCAGCCGGTGCCCCTGTaGGAGCAACAAGTTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSRCLYLLGISLVHIPSFQPVPL*EQQVLA Trigger: AGCAAGAACTTGTTGCTCCCACAGGGGCACCGGCTG...GAAAGACGGTATGTGTACTAGAGAGATGCCCAGCAGGTAAAGACACCTGCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CCA 90 bp | ATGGCTGGTAGCAGGTGTCTTTACCTGCTGGGCATCTCTCTAGTACACATACCGATTCCTGCTAAGGGCTaGGCCATGGACACAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: MAGSRCLYLLGISLVHIPIPAKG*AMDTAT Trigger: TGTGGCTGTGTCCATGGCCCAGCCCTTAGCAGGAAT...CGGTATGTGTACTAGAGAGATGCCCAGCAGGTAAAGACACCTGCTACCAGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR TCA 90 bp | AAATTGGAGGCTGGCTTACTCTACAAAGGGAATCCTGGGACAGCTGGGACTACATCTGACAGTCACCTTTaGGGAAGTCGCGGCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: KLEAGLLYKGNPGTAGTTSDSHL*GSRGRW Trigger: CCATCTGCCGCGACTTCCTCAAAGGTGACTGTCAGA...TGTAGTCCCAGCTGTCCCAGGATTCCCTTTGTAGAGTAAGCCAGCCTCCAATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CCA 90 bp | TGTGTTGGAGCAGAAAGACATAAACTGCCATCAACAGCTTGGAGAGGCAACACCGGAAGTCGCGGCAGATaGGGACCTCCTCCTTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: CVGAERHKLPSTAWRGNTGSRGR*GPPPYH Trigger: ATGGTAAGGAGGAGGTCCCCATCTGCCGCGACTTCC...GGTGTTGCCTCTCCAAGCTGTTGATGGCAGTTTATGTCTTTCTGCTCCAACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CCA 90 bp | GGTAGCAGGTGTCTTTACCTGCTGGGCATCTCTCTAGTACACATACCGTCTTTCTTAGGGCCTGGTTCGTaGTCCTCAAAGCCCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSRCLYLLGISLVHIPSFLGPGS*SSKPLS Trigger: GGAAAGGGGCTTTGAGGACCACGAACCAGGCCCTAA...GAAAGACGGTATGTGTACTAGAGAGATGCCCAGCAGGTAAAGACACCTGCTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CCA 90 bp | TGTCTTTACCTGCTGGGCATCTCTCTAGTACACATACCGTCTTTCGTATTTTCCCCGGCGCTTAGGGCCTaGTTCGTGGTCCTCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CLYLLGISLVHIPSFVFSPALRA*FVVLKA Trigger: GGCTTTGAGGACCACGAACCAGGCCCTAAGCGCCGG...GGAAAATACGAAAGACGGTATGTGTACTAGAGAGATGCCCAGCAGGTAAAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CCA 90 bp | GGTAGCAGGTGTCTTTACCTGCTGGGCATCTCTCTAGTACACATACCGTCTTTCGCAACAAGTTCTTGCTaGGACACAGGCCGAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSRCLYLLGISLVHIPSFATSSC*DTGRGC Trigger: ACAGCCTCGGCCTGTGTCCCAGCAAGAACTTGTTGC...GAAAGACGGTATGTGTACTAGAGAGATGCCCAGCAGGTAAAGACACCTGCTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CCA 90 bp | GCTCATATGAGGTCTTTGCTCCTGACCACTGACTTTCACTTTCTCCATCTTTCCCTAAGGGCTGGGCCATaGACACAGCCACAGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AHMRSLLLTTDFHFLHLSLRAGP*TQPQEP Trigger: TGGCTCCTGTGGCTGTGTCCATGGCCCAGCCCTTAG...GGAAAGATGGAGAAAGTGAAAGTCAGTGGTCAGGAGCAAAGACCTCATATGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR TCA 90 bp | GCTCATATGAGGTCTTTGCTCCTGACCACTGACTTTCACTTTCTCCATCTTTCCAGTGTGGCATGGCTGTaGTGCGCATGCTCTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AHMRSLLLTTDFHFLHLSSVAWL*CACSGK Trigger: CTTCCCAGAGCATGCGCATCACAGCCATGCCACACT...GGAAAGATGGAGAAAGTGAAAGTCAGTGGTCAGGAGCAAAGACCTCATATGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR GCA 90 bp | GGTAGCAGGTGTCTTTACCTGCTGGGCATCTCTCTAGTACACATACCGTCTTTCGCAGGTGACGAAACTTaGACTTGGCTCCTCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GSRCLYLLGISLVHIPSFAGDET*TWLLSD Trigger: GTCAGAGAGGAGCCAAGTGCAAGTTTCGTCACCTGC...GAAAGACGGTATGTGTACTAGAGAGATGCCCAGCAGGTAAAGACACCTGCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CCA 90 bp | GGTAGCAGGTGTCTTTACCTGCTGGGCATCTCTCTAGTACACATACCGTCTTTCGTCTGGGCGATGCCATaGTTAAAAGTGGCCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSRCLYLLGISLVHIPSFVWAMP*LKVATV Trigger: CACAGTGGCCACTTTTAACCATGGCATCGCCCAGAC...GAAAGACGGTATGTGTACTAGAGAGATGCCCAGCAGGTAAAGACACCTGCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR CAA 72 bp | AGGGTGTCAGAAGCCCTTGAATTGAAGTTACAGAAGTaGTGGGCCACCATGTGGGTGCTGGGAACTAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVSEALELKLQK*WATMWVLGTKP Trigger: AGGCTTAGTTCCCAGCACCCACATGGTGGCCCACAACTTCTGTAACTTCAATTCAAGGGCTTCTGACACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR TCA 90 bp | TGTGTTGGAGCAGAAAGACATAAACTGCCATCAACAGCTTGGAGAGGCAACACCCACTTGGCTCCTCTCTaGCAGTCACCTTTGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CVGAERHKLPSTAWRGNTHLAPL*QSPLRK Trigger: CTTCCTCAAAGGTGACTGTCAGAGAGGAGCCAAGTG...GGTGTTGCCTCTCCAAGCTGTTGATGGCAGTTTATGTCTTTCTGCTCCAACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CCA 90 bp | GCTCATATGAGGTCTTTGCTCCTGACCACTGACTTTCACTTTCTCCATCTTTCCGGAAGTCTCTACAGATaGCATCTGAGGTGGCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: AHMRSLLLTTDFHFLHLSGSLYR*HLRWLP Trigger: GGGGAGCCACCTCAGATGCCATCTGTAGAGACTTCC...GGAAAGATGGAGAAAGTGAAAGTCAGTGGTCAGGAGCAAAGACCTCATATGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR CAA 72 bp | GGTATTATCTGTGCGAGGGTGTCAGAAGCCCTTGAATaGAAGTTACAGAAGTTGTGGGCCACCATGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GIICARVSEALE*KLQKLWATMWV Trigger: CACCCACATGGTGGCCCACAACTTCTGTAACTTCAATTCAAGGGCTTCTGACACCCTCGCACAGATAATACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR CAA 72 bp | CAGCACTTGGGAAGTAGAGTCATGTGGGTCTCTAAATaGGAGGCTGGCTTACTCTACAAAGGGAATCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QHLGSRVMWVSK*EAGLLYKGNPG Trigger: CCCAGGATTCCCTTTGTAGAGTAAGCCAGCCTCCAATTTAGAGACCCACATGACTCTACTTCCCAAGTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CCA 90 bp | ACCTTCTGGTCATGTATAGAGGCAGAGAAAGGATTAATACCCTTCCCATGTTATCAGTCGCGGGGGCAGTaGAGCTCAGAGTCATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TFWSCIEAEKGLIPFPCYQSRGQ*SSESSP Trigger: AGGTGATGACTCTGAGCTCCACTGCCCCCGCGACTG...ATAACATGGGAAGGGTATTAATCCTTTCTCTGCCTCTATACATGACCAGAAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| 3UTR CAA 72 bp | GCCTGGAAAGCTGAAAGCACTGGCCCTCAAGATGTGTaGGAGCAGAAAGACATAAACTGCCATCAACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AWKAESTGPQDV*EQKDINCHQQL Trigger: AAGCTGTTGATGGCAGTTTATGTCTTTCTGCTCCAACACATCTTGAGGGCCAGTGCTTTCAGCTTTCCAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR GCA 90 bp | TGTCTTTACCTGCTGGGCATCTCTCTAGTACACATACCGTCTTTCGTATTTTCCGCTGTAGAGCCTGGCTaGTCAGAGTGGTATGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CLYLLGISLVHIPSFVFSAVEPG*SEWYES Trigger: AGACTCATACCACTCTGAGCAGCCAGGCTCTACAGC...GGAAAATACGAAAGACGGTATGTGTACTAGAGAGATGCCCAGCAGGTAAAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CCA 90 bp | AGCTATCTCTCCAGTCCCTCGTTCTCTTCTATGTATAACTCAGGCAGCATAGCAGACGAAACTTGCACTTaGCTCCTCTCTGACAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SYLSSPSFSSMYNSGSIADETCT*LLSDSH Trigger: GTGACTGTCAGAGAGGAGCCAAGTGCAAGTTTCGTC...TGCTATGCTGCCTGAGTTATACATAGAAGAGAACGAGGGACTGGAGAGATAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CCA 90 bp | ACCTTCTGGTCATGTATAGAGGCAGAGAAAGGATTAATACCCTTCCCATGTTATTCACTCATGTCTGGGTaGCGGTATCGACATCGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TFWSCIEAEKGLIPFPCYSLMSG*RYRHRL Trigger: CAAGCGATGTCGATACCGCCACCCAGACATGAGTGA...ATAACATGGGAAGGGTATTAATCCTTTCTCTGCCTCTATACATGACCAGAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CCA 90 bp | ACCTTCTGGTCATGTATAGAGGCAGAGAAAGGATTAATACCCTTCCCATGTTATTCAGAGTCATCACCTTaGCCTGATTCCGGAACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TFWSCIEAEKGLIPFPCYSESSP*PDSGTG Trigger: CCCAGTTCCGGAATCAGGCCAAGGTGATGACTCTGA...ATAACATGGGAAGGGTATTAATCCTTTCTCTGCCTCTATACATGACCAGAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR GCA 90 bp | ACCTTCTGGTCATGTATAGAGGCAGAGAAAGGATTAATACCCTTCCCATGTTATATCGCTTGCCTCGTTTaGAGACGTTCCTCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TFWSCIEAEKGLIPFPCYIACLV*RRSSGS Trigger: ACTTCCTGAGGAACGTCTGCAAACGAGGCAAGCGAT...ATAACATGGGAAGGGTATTAATCCTTTCTCTGCCTCTATACATGACCAGAAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR GCA 90 bp | ACCTTCTGGTCATGTATAGAGGCAGAGAAAGGATTAATACCCTTCCCATGTTATCGGAACTGGGCATTCTaGTCCAGAAGTACCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: TFWSCIEAEKGLIPFPCYRNWAF*SRSTSL Trigger: CAATGAGGTACTTCTGGAGCAGAATGCCCAGTTCCG...ATAACATGGGAAGGGTATTAATCCTTTCTCTGCCTCTATACATGACCAGAAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CCA 90 bp | TGTCTTTACCTGCTGGGCATCTCTCTAGTACACATACCGTCTTTCGTATTTTCCATAGGAGTAGTGGTGTaGCTCATTGTGATTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CLYLLGISLVHIPSFVFSIGVVV*LIVIPA Trigger: AGCAGGAATCACAATGAGCCACACCACTACTCCTAT...GGAAAATACGAAAGACGGTATGTGTACTAGAGAGATGCCCAGCAGGTAAAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR TCA 90 bp | ACCTTCTGGTCATGTATAGAGGCAGAGAAAGGATTAATACCCTTCCCATGTTATAAATCCCTTTGCAGGTaGCGAAACTTGCACTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TFWSCIEAEKGLIPFPCYKSLCR*RNLHLA Trigger: AGCCAAGTGCAAGTTTCGTCACCTGCAAAGGGATTT...ATAACATGGGAAGGGTATTAATCCTTTCTCTGCCTCTATACATGACCAGAAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS CCA 90 bp | GGGGCCGTCAGGAGGGCAGCAGCCACCTCTCCGGCGCTTAGGGCCTaGTTCGTGGTCCTCAAAGCCCCTTTCCGGAAGGTCGTAGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: GAVRRAAATSPALRA*FVVLKAPFRKVVDV Trigger: GACATCTACGACCTTCCGGAAAGGGGCTTTGAGGACCACGAACCAGGCCCTAAGCGCCGGAGAGGTGGCTGCTGCCCTCCTGACGGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS CCA 90 bp | GTCGGGGGAGCAGCCGGTGCCCCTGTGGGAGCAACAAGTTCTTGCTaGGACACAGGCCGAGGCTGTAGAGCCTGGCTGCTCAGAGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VGGAAGAPVGATSSC*DTGRGCRAWLLRVV Trigger: TACCACTCTGAGCAGCCAGGCTCTACAGCCTCGGCCTGTGTCCCAGCAAGAACTTGTTGCTCCCACAGGGGCACCGGCTGCTCCCCCGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS GCA 90 bp | TTAGTCGGGGGAGCAGCCGGTGCCCCTGTGGGAGCAACAAGTTCTTaGTGGGACACAGGCCGAGGCTGTAGAGCCTGGCTGCTCAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LVGGAAGAPVGATSS*WDTGRGCRAWLLRV Trigger: CACTCTGAGCAGCCAGGCTCTACAGCCTCGGCCTGTGTCCCAGCAAGAACTTGTTGCTCCCACAGGGGCACCGGCTGCTCCCCCGACTAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CAA 90 bp | TTCCCCTACTCTGGGTTTGAGTACTATGGTCCCAGCCTTCCCAGGGGCCCAGGAACCTCCTCCTTACCATaGGGTAGGTCGGCGGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FPYSGFEYYGPSLPRGPGTSSLP*GRSAGE Trigger: CTCACCCGCCGACCTACCCAATGGTAAGGAGGAGGT...TCCTGGGCCCCTGGGAAGGCTGGGACCATAGTACTCAAACCCAGAGTAGGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS TCA 90 bp | TGGGACACAGGCCGAGGCTGTAGAGCCTGGCTGCTCAGAGTGGTATaGGTCTGGGCGATGCCATGGTTAAAAGTGGCCACTGTGCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: WDTGRGCRAWLLRVV*VWAMPWLKVATVPT Trigger: TGTGGGCACAGTGGCCACTTTTAACCATGGCATCGCCCAGACTCATACCACTCTGAGCAGCCAGGCTCTACAGCCTCGGCCTGTGTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS CCA 90 bp | GGGTCTGCTCAGTCGCGGGGGCAGTGGAGCTCAGAGTCATCACCTTaGCCTGATTCCGGAACTGGGCATTCTGCTCCAGAAGTACCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GSAQSRGQWSSESSP*PDSGTGHSAPEVPH Trigger: ATGAGGTACTTCTGGAGCAGAATGCCCAGTTCCGGAATCAGGCCAAGGTGATGACTCTGAGCTCCACTGCCCCCGCGACTGAGCAGACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS TCA 90 bp | TGCTCAGTCGCGGGGGCAGTGGAGCTCAGAGTCATCACCTTGGCCTaGTTCCGGAACTGGGCATTCTGCTCCAGAAGTACCTCATTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CSVAGAVELRVITLA*FRNWAFCSRSTSLV Trigger: CACCAATGAGGTACTTCTGGAGCAGAATGCCCAGTTCCGGAATCAGGCCAAGGTGATGACTCTGAGCTCCACTGCCCCCGCGACTGAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS GCA 90 bp | TTCTGCTCCAGAAGTACCTCATTGGTGGCCAGCAGGTTGCTGACCTaGTTCTTCAGCTCCTCCACGCGTTTCCTGAGCAGGGCGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FCSRSTSLVASRLLT*FFSSSTRFLSRAFS Trigger: GGAGAACGCCCTGCTCAGGAAACGCGTGGAGGAGCTGAAGAAGCAGGTCAGCAACCTGCTGGCCACCAATGAGGTACTTCTGGAGCAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS CCA 90 bp | ACCATAGGAGTAGTGGTGTGGCTCATTGTGATTCCTGCTAAGGGCTaGGCCATGGACACAGCCACAGGAGCCACAGGAGCCACAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: TIGVVVWLIVIPAKG*AMDTATGATGATDT Trigger: TGTGTCTGTGGCTCCTGTGGCTCCTGTGGCTGTGTCCATGGCCCAGCCCTTAGCAGGAATCACAATGAGCCACACCACTACTCCTATGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS TCA 90 bp | GCAGGTGACGAAACTTGCACTTGGCTCCTCTCTGACAGTCACCTTTaGGGAAGTCGCGGCAGATGGGGACCTCCTCCTTACCATTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: AGDETCTWLLSDSHL*GSRGRWGPPPYHWV Trigger: TACCCAATGGTAAGGAGGAGGTCCCCATCTGCCGCGACTTCCTCAAAGGTGACTGTCAGAGAGGAGCCAAGTGCAAGTTTCGTCACCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS GCA 90 bp | CCTCACTCATGTCTGGGTGGCGGTATCGACATCGCTTGCCTCGTTTaGAGACGTTCCTCAGGAAGTCTCTACAGATGGCATCTGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PHSCLGGGIDIACLV*RRSSGSLYRWHLRW Trigger: CCACCTCAGATGCCATCTGTAGAGACTTCCTGAGGAACGTCTGCAAACGAGGCAAGCGATGTCGATACCGCCACCCAGACATGAGTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040572.10 ENSMUST00000152539.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCCTACTCTGGGTTTGAGTACTATGGTCCCAGCCTTCCCAGGGGCCCAGGATTGCTTACCCCCAAATaGGATACCTCACTCATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FPYSGFEYYGPSLPRGPGLLTPK*DTSLMS Trigger: AGACATGAGTGAGGTATCCAATTTGGGGGTAAGCAA...TCCTGGGCCCCTGGGAAGGCTGGGACCATAGTACTCAAACCCAGAGTAGGGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CAA 90 bp | GCGAGGGTGTCAGAAGCCCTTGAATTGAAGTTACAGAAGTTGTGGGCCACCATGGGGCGGCTACACTCCTaGTTTTGGAAGTCATGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ARVSEALELKLQKLWATMGRLHS*FWKSWQ Trigger: CTGCCATGACTTCCAAAACAAGGAGTGTAGCCGCCC...CATGGTGGCCCACAACTTCTGTAACTTCAATTCAAGGGCTTCTGACACCCTCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CAA 90 bp | GAGAACACACCAGCACAACCCTGCCTCAGGAGATGCTCCTACCAAGTATATTCCTCCAGAAGTACCTCATaGGTGGCCAGCAGGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ENTPAQPCLRRCSYQVYSSRSTS*VASRLL Trigger: CAGCAACCTGCTGGCCACCAATGAGGTACTTCTGGA...GGAATATACTTGGTAGGAGCATCTCCTGAGGCAGGGTTGTGCTGGTGTGTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CAA 90 bp | GGTAGCAGGTGTCTTTACCTGCTGGGCATCTCTCTAGTACACATACCGTCTTTCCATCGCTTGCCTCGTTaGCAGACGTTCCTCAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GSRCLYLLGISLVHIPSFHRLPR*QTFLRK Trigger: CTTCCTGAGGAACGTCTGCAAACGAGGCAAGCGATG...GAAAGACGGTATGTGTACTAGAGAGATGCCCAGCAGGTAAAGACACCTGCTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS TCA 90 bp | CTCCTGTCTTCTTATAGCCATCCTCATCCTCCTTGGAGCCGTGGATaGAACGACAGTTGGGGCGGCTACACTCCTTGTTTTGGAAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLSSYSHPHPPWSRG*NDSWGGYTPCFGSH Trigger: ATGACTTCCAAAACAAGGAGTGTAGCCGCCCCAACTGTCGTTTCATCCACGGCTCCAAGGAGGATGAGGATGGCTATAAGAAGACAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040572.10 ENSMUST00000152539.8 |
||
| CDS GCA 90 bp | AATTGGATACCTCACTCATGTCTGGGTGGCGGTATCGACATCGCTTaGCTCGTTTGCAGACGTTCCTCAGGAAGTCTCTACAGATGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: NWIPHSCLGGGIDIA*LVCRRSSGSLYRWH Trigger: ATGCCATCTGTAGAGACTTCCTGAGGAACGTCTGCAAACGAGGCAAGCGATGTCGATACCGCCACCCAGACATGAGTGAGGTATCCAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040572.10 ENSMUST00000152539.8 |
||
| CDS CCA 90 bp | TCATTTTTGCTTACCCCCAAATTGGATACCTCACTCATGTCTGGGTaGCGGTATCGACATCGCTTGCCTCGTTTGCAGACGTTCCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SFLLTPKLDTSLMSG*RYRHRLPRLQTFLR Trigger: CCTGAGGAACGTCTGCAAACGAGGCAAGCGATGTCGATACCGCCACCCAGACATGAGTGAGGTATCCAATTTGGGGGTAAGCAAAAATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040572.10 ENSMUST00000152539.8 |
||
| CDS-3UTR CAA 90 bp | TGTCTTTACCTGCTGGGCATCTCTCTAGTACACATACCGTCTTTCGTATTTTCCCCATCCTCATCCTCCTaGGAGCCGTGGATGAAACGA | + |
|
Preference number: 5 (lower is better) Translates to: CLYLLGISLVHIPSFVFSPSSSS*EPWMKR Trigger: TCGTTTCATCCACGGCTCCAAGGAGGATGAGGATGG...GGAAAATACGAAAGACGGTATGTGTACTAGAGAGATGCCCAGCAGGTAAAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS CCA 90 bp | AAATTCATTTTTGCTTACCCCCAAATTGGATACCTCACTCATGTCTaGGTGGCGGTATCGACATCGCTTGCCTCGTTTGCAGACGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KFIFAYPQIGYLTHV*VAVSTSLASFADVP Trigger: AGGAACGTCTGCAAACGAGGCAAGCGATGTCGATACCGCCACCCAGACATGAGTGAGGTATCCAATTTGGGGGTAAGCAAAAATGAATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000040572.10 ENSMUST00000152539.8 |
||
| CDS-3UTR CAA 90 bp | ACCTTCTGGTCATGTATAGAGGCAGAGAAAGGATTAATACCCTTCCCATGTTATTTGGTGGCCAGCAGGTaGCTGACCTGCTTCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TFWSCIEAEKGLIPFPCYLVASR*LTCFFS Trigger: GCTGAAGAAGCAGGTCAGCAACCTGCTGGCCACCAA...ATAACATGGGAAGGGTATTAATCCTTTCTCTGCCTCTATACATGACCAGAAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CAA 90 bp | GCTCATATGAGGTCTTTGCTCCTGACCACTGACTTTCACTTTCTCCATCTTTCCGCTACACTCCTTGTTTaGGAAGTCATGGCAGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: AHMRSLLLTTDFHFLHLSATLLV*EVMAED Trigger: ATCTTCTGCCATGACTTCCAAAACAAGGAGTGTAGC...GGAAAGATGGAGAAAGTGAAAGTCAGTGGTCAGGAGCAAAGACCTCATATGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS-3UTR CAA 90 bp | ACATACGTAAAACAGCATTTACCCATTTTAGAAGACTTGTATCTGCCTGGCATGTGGATGAAACGACAGTaGGGGCGGCTACACTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TYVKQHLPILEDLYLPGMWMKRQ*GRLHSL Trigger: CAAGGAGTGTAGCCGCCCCAACTGTCGTTTCATCCA...CATGCCAGGCAGATACAAGTCTTCTAAAATGGGTAAATGCTGTTTTACGTATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS TCA 72 bp | GGGCGATGGTCTGAGCCAGAGCGGCTGACAGCGGCGTaGTCTCGGGGTTCAGGTGTGGAGGTGGGGGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GRWSEPERLTAA*SRGSGVEVGAA Trigger: CGCCGCCCCCACCTCCACACCTGAACCCCGAGATCACGCCGCTGTCAGCCGCTCTGGCTCAGACCATCGCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS TCA 72 bp | GAAACAGGTGGGGGTGCCATCCCCTGGGCGATGGTCTaGGCCAGAGCGGCTGACAGCGGCGTGATCTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: ETGGGAIPWAMV*ARAADSGVISG Trigger: CCCCGAGATCACGCCGCTGTCAGCCGCTCTGGCTCAGACCATCGCCCAGGGGATGGCACCCCCACCTGTTTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS TCA 72 bp | TGCCATCCCCTGGGCGATGGTCTGAGCCAGAGCGGCTaGCAGCGGCGTGATCTCGGGGTTCAGGTGTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: CHPLGDGLSQSG*QRRDLGVQVWR Trigger: CCTCCACACCTGAACCCCGAGATCACGCCGCTGTCAGCCGCTCTGGCTCAGACCATCGCCCAGGGGATGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS CCA 72 bp | GGAAGTCGCGGCAGATGGGGACCTCCTCCTTACCATTaGGTAGGTCGGCGGGTGAGAGACCCAGCCCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: GSRGRWGPPPYH*VGRRVRDPAQR Trigger: CCGCTGGGCTGGGTCTCTCACCCGCCGACCTACCCAATGGTAAGGAGGAGGTCCCCATCTGCCGCGACTTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS GCA 72 bp | TCGGCGGGTGAGAGACCCAGCCCAGCGGCCACTTTCTaGCTCAGCCGGGGAGGCAGCTCTCCTGTCTTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SAGERPSPAATF*LSRGGSSPVFL Trigger: TAAGAAGACAGGAGAGCTGCCTCCCCGGCTGAGGCAGAAAGTGGCCGCTGGGCTGGGTCTCTCACCCGCCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040572.10 ENSMUST00000152539.8 |
||
| CDS CCA 72 bp | AGGAGGGCAGCAGCCACCTCTCCGGCGCTTAGGGCCTaGTTCGTGGTCCTCAAAGCCCCTTTCCGGAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RRAAATSPALRA*FVVLKAPFRKV Trigger: GACCTTCCGGAAAGGGGCTTTGAGGACCACGAACCAGGCCCTAAGCGCCGGAGAGGTGGCTGCTGCCCTCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS CCA 72 bp | GCAGCCGGTGCCCCTGTGGGAGCAACAAGTTCTTGCTaGGACACAGGCCGAGGCTGTAGAGCCTGGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AAGAPVGATSSC*DTGRGCRAWLL Trigger: GAGCAGCCAGGCTCTACAGCCTCGGCCTGTGTCCCAGCAAGAACTTGTTGCTCCCACAGGGGCACCGGCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS CAA 90 bp | TCACCTTTGAGGAAGTCGCGGCAGATGGGGACCTCCTCCTTACCATaGGGTAGGTCGGCGGGTGAGAGACCCAGCCCAGCGGCCACTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SPLRKSRQMGTSSLP*GRSAGERPSPAATF Trigger: GAAAGTGGCCGCTGGGCTGGGTCTCTCACCCGCCGACCTACCCAATGGTAAGGAGGAGGTCCCCATCTGCCGCGACTTCCTCAAAGGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS TCA 72 bp | GCGGGGGCAGTGGAGCTCAGAGTCATCACCTTGGCCTaGTTCCGGAACTGGGCATTCTGCTCCAGAAGTACC | + |
|
Preference number: 6 (lower is better) Translates to: AGAVELRVITLA*FRNWAFCSRST Trigger: GGTACTTCTGGAGCAGAATGCCCAGTTCCGGAATCAGGCCAAGGTGATGACTCTGAGCTCCACTGCCCCCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS CCA 72 bp | CTCGTTTGCAGACGTTCCTCAGGAAGTCTCTACAGATaGCATCTGAGGTGGCTCCCCCGCTGCCTGTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LVCRRSSGSLYR*HLRWLPRCLSL Trigger: CAGGGACAGGCAGCGGGGGAGCCACCTCAGATGCCATCTGTAGAGACTTCCTGAGGAACGTCTGCAAACGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040572.10 ENSMUST00000152539.8 |
||
| CDS CCA 72 bp | CAGTCGCGGGGGCAGTGGAGCTCAGAGTCATCACCTTaGCCTGATTCCGGAACTGGGCATTCTGCTCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: QSRGQWSSESSP*PDSGTGHSAPE Trigger: TTCTGGAGCAGAATGCCCAGTTCCGGAATCAGGCCAAGGTGATGACTCTGAGCTCCACTGCCCCCGCGACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS TCA 72 bp | GGCCGAGGCTGTAGAGCCTGGCTGCTCAGAGTGGTATaGGTCTGGGCGATGCCATGGTTAAAAGTGGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: GRGCRAWLLRVV*VWAMPWLKVAT Trigger: AGTGGCCACTTTTAACCATGGCATCGCCCAGACTCATACCACTCTGAGCAGCCAGGCTCTACAGCCTCGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS GCA 72 bp | AGAAGTACCTCATTGGTGGCCAGCAGGTTGCTGACCTaGTTCTTCAGCTCCTCCACGCGTTTCCTGAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSTSLVASRLLT*FFSSSTRFLSR Trigger: CCTGCTCAGGAAACGCGTGGAGGAGCTGAAGAAGCAGGTCAGCAACCTGCTGGCCACCAATGAGGTACTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS TCA 72 bp | GAAACTTGCACTTGGCTCCTCTCTGACAGTCACCTTTaGGGAAGTCGCGGCAGATGGGGACCTCCTCCTTAC | + |
|
Preference number: 6 (lower is better) Translates to: ETCTWLLSDSHL*GSRGRWGPPPY Trigger: GTAAGGAGGAGGTCCCCATCTGCCGCGACTTCCTCAAAGGTGACTGTCAGAGAGGAGCCAAGTGCAAGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS GCA 72 bp | CCTCACTCATGTCTGGGTGGCGGTATCGACATCGCTTaGCTCGTTTGCAGACGTTCCTCAGGAAGTCTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: PHSCLGGGIDIA*LVCRRSSGSLY Trigger: GTAGAGACTTCCTGAGGAACGTCTGCAAACGAGGCAAGCGATGTCGATACCGCCACCCAGACATGAGTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040572.10 ENSMUST00000152539.8 |
||
| CDS CAA 72 bp | TTCCGGAACTGGGCATTCTGCTCCAGAAGTACCTCATaGGTGGCCAGCAGGTTGCTGACCTGCTTCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FRNWAFCSRSTS*VASRLLTCFFS Trigger: GCTGAAGAAGCAGGTCAGCAACCTGCTGGCCACCAATGAGGTACTTCTGGAGCAGAATGCCCAGTTCCGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS CAA 90 bp | ACCTCACTCATGTCTGGGTGGCGGTATCGACATCGCTTGCCTCGTTaGCAGACGTTCCTCAGGAAGTCTCTACAGATGGCATCTGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: TSLMSGWRYRHRLPR*QTFLRKSLQMASEV Trigger: CACCTCAGATGCCATCTGTAGAGACTTCCTGAGGAACGTCTGCAAACGAGGCAAGCGATGTCGATACCGCCACCCAGACATGAGTGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040572.10 ENSMUST00000152539.8 |
||
| CDS CAA 90 bp | ACCTCCAGTGCCTCCTCCACCGCGAGCATCAAACTCAAAATCCCTTaGCAGGTGACGAAACTTGCACTTGGCTCCTCTCTGACAGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: TSSASSTASIKLKIP*QVTKLALGSSLTVT Trigger: GGTGACTGTCAGAGAGGAGCCAAGTGCAAGTTTCGTCACCTGCAAAGGGATTTTGAGTTTGATGCTCGCGGTGGAGGAGGCACTGGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040572.10 |
||
| CDS GCA 72 bp | TGTCTGGGTGGCGGTATCGACATCGCTTGCCTCGTTTaGAGACGTTCCTCAGGAAGTCTCTACAGATGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: CLGGGIDIACLV*RRSSGSLYRWH Trigger: ATGCCATCTGTAGAGACTTCCTGAGGAACGTCTGCAAACGAGGCAAGCGATGTCGATACCGCCACCCAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040572.10 ENSMUST00000152539.8 |
||
| CDS CCA 72 bp | CTTACCCCCAAATTGGATACCTCACTCATGTCTGGGTaGCGGTATCGACATCGCTTGCCTCGTTTGCAGACG | + |
|
Preference number: 6 (lower is better) Translates to: LTPKLDTSLMSG*RYRHRLPRLQT Trigger: CGTCTGCAAACGAGGCAAGCGATGTCGATACCGCCACCCAGACATGAGTGAGGTATCCAATTTGGGGGTAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040572.10 ENSMUST00000152539.8 |
||
| CDS CAA 72 bp | ATGTCTGGGTGGCGGTATCGACATCGCTTGCCTCGTTaGCAGACGTTCCTCAGGAAGTCTCTACAGATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: MSGWRYRHRLPR*QTFLRKSLQMA Trigger: TGCCATCTGTAGAGACTTCCTGAGGAACGTCTGCAAACGAGGCAAGCGATGTCGATACCGCCACCCAGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040572.10 ENSMUST00000152539.8 |
||
| CDS CAA 72 bp | ACCTCACTCATGTCTGGGTGGCGGTATCGACATCGCTaGCCTCGTTTGCAGACGTTCCTCAGGAAGTCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: TSLMSGWRYRHR*PRLQTFLRKSL Trigger: TAGAGACTTCCTGAGGAACGTCTGCAAACGAGGCAAGCGATGTCGATACCGCCACCCAGACATGAGTGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040572.10 ENSMUST00000152539.8 |
||
| CDS CAA 90 bp | AAATTGGATACCTCACTCATGTCTGGGTGGCGGTATCGACATCGCTaGCCTCGTTTGCAGACGTTCCTCAGGAAGTCTCTACAGATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: KLDTSLMSGWRYRHR*PRLQTFLRKSLQMA Trigger: TGCCATCTGTAGAGACTTCCTGAGGAACGTCTGCAAACGAGGCAAGCGATGTCGATACCGCCACCCAGACATGAGTGAGGTATCCAATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040572.10 ENSMUST00000152539.8 |
||
| CDS TCA 72 bp | TCTTATAGCCATCCTCATCCTCCTTGGAGCCGTGGATaGAACGACAGTTGGGGCGGCTACACTCCTTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SYSHPHPPWSRG*NDSWGGYTPCF Trigger: AAAACAAGGAGTGTAGCCGCCCCAACTGTCGTTTCATCCACGGCTCCAAGGAGGATGAGGATGGCTATAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040572.10 ENSMUST00000152539.8 |
||
| CDS CCA 72 bp | TTTGCTTACCCCCAAATTGGATACCTCACTCATGTCTaGGTGGCGGTATCGACATCGCTTGCCTCGTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: FAYPQIGYLTHV*VAVSTSLASFA Trigger: TGCAAACGAGGCAAGCGATGTCGATACCGCCACCCAGACATGAGTGAGGTATCCAATTTGGGGGTAAGCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040572.10 ENSMUST00000152539.8 |
||