Pregenerated sensors for ZC2HC1C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045064Ensembl transcript IDs: ENSMUST00000059341.5, ENSMUST00000239335.2
Found 206 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCAGTGGCTGCCCTCAGGGGTCAATTTGCCCCGCAGGCAGATCCTaGGCTCTGGAGAAGTTTATCTCCCTGCTTCCCATCCCTTACTCT | + |
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Preference number: 1 (lower is better) Translates to: SSGCPQGSICPAGRS*ALEKFISLLPIPYS Trigger: AGAGTAAGGGATGGGAAGCAGGGAGATAAACTTCTCCAGAGCTCAGGATCTGCCTGCGGGGCAAATTGACCCCTGAGGGCAGCCACTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR CCA 90 bp | CCAAATCCTTATGCTCAGGAGGCCCAGCAGATGAGGCAGGGAATCTaGTTCTGTCTGCCATCATTCCCTCTAGAAGGAGCAGAGCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: PNPYAQEAQQMRQGI*FCLPSFPLEGAEQQ Trigger: CTGCTGCTCTGCTCCTTCTAGAGGGAATGATGGCAGACAGAACCAGATTCCCTGCCTCATCTGCTGGGCCTCCTGAGCATAAGGATTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR TCA 90 bp | GAAGGATTGTCAGCAGGTCAAGAGTGGCTTGCTAGGCACTCAAGGTaGCCAGAGTCCAACCTACAGAGTCCACACAGCTGTGTGTGGTCT | + |
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Preference number: 1 (lower is better) Translates to: EGLSAGQEWLARHSR*PESNLQSPHSCVWS Trigger: AGACCACACACAGCTGTGTGGACTCTGTAGGTTGGACTCTGGTCACCTTGAGTGCCTAGCAAGCCACTCTTGACCTGCTGACAATCCTTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR GCA 90 bp | TTTGCCCCGCAGGCAGATCCTGAGCTCTGGAGAAGTTTATCTCCCTaGTTCCCATCCCTTACTCTCTGGTTTACTGCTGAAGGGAAGCAC | + |
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Preference number: 1 (lower is better) Translates to: FAPQADPELWRSLSP*FPSLTLWFTAEGKH Trigger: GTGCTTCCCTTCAGCAGTAAACCAGAGAGTAAGGGATGGGAAGCAGGGAGATAAACTTCTCCAGAGCTCAGGATCTGCCTGCGGGGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR CCA 90 bp | GAGCTCTGGAGAAGTTTATCTCCCTGCTTCCCATCCCTTACTCTCTaGTTTACTGCTGAAGGGAAGCACAGCCTGAGTGGGGTTGGTTTC | + |
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Preference number: 1 (lower is better) Translates to: ELWRSLSPCFPSLTL*FTAEGKHSLSGVGF Trigger: GAAACCAACCCCACTCAGGCTGTGCTTCCCTTCAGCAGTAAACCAGAGAGTAAGGGATGGGAAGCAGGGAGATAAACTTCTCCAGAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR TCA 90 bp | AAGTTTATCTCCCTGCTTCCCATCCCTTACTCTCTGGTTTACTGCTaGAGGGAAGCACAGCCTGAGTGGGGTTGGTTTCTGCCATTTTCT | + |
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Preference number: 1 (lower is better) Translates to: KFISLLPIPYSLVYC*REAQPEWGWFLPFS Trigger: AGAAAATGGCAGAAACCAACCCCACTCAGGCTGTGCTTCCCTTCAGCAGTAAACCAGAGAGTAAGGGATGGGAAGCAGGGAGATAAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR TCA 90 bp | GACTCTGAGATGCCCTGCAAAGCCAGAAGTCATTTATTGCCTCAGTaGTTAACTGCCGACATAAATACGCCGGTCATTAAACCTCACGGG | + |
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Preference number: 1 (lower is better) Translates to: DSEMPCKARSHLLPQ*LTADINTPVIKPHG Trigger: CCCGTGAGGTTTAATGACCGGCGTATTTATGTCGGCAGTTAATCACTGAGGCAATAAATGACTTCTGGCTTTGCAGGGCATCTCAGAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR CCA 90 bp | GTGGGGATGCGACCTTGTGATTTTAGCCGTGGCGTATTTGTTACATaGAATAAAGAACATTGTGTACTCCTCAGTGAACTTGCCTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: VGMRPCDFSRGVFVT*NKEHCVLLSELAWG Trigger: CCCCCAGGCAAGTTCACTGAGGAGTACACAATGTTCTTTATTCCATGTAACAAATACGCCACGGCTAAAATCACAAGGTCGCATCCCCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR TCA 90 bp | GATCTACATCCCAGCTCTGCTTGCCATCTGTGTGGTTGTGAAGAATaGTCAACTGACCGAAAGCAAATGTTGACAAGAGGCACTGTGCTA | + |
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Preference number: 1 (lower is better) Translates to: DLHPSSACHLCGCEE*STDRKQMLTRGTVL Trigger: TAGCACAGTGCCTCTTGTCAACATTTGCTTTCGGTCAGTTGATCATTCTTCACAACCACACAGATGGCAAGCAGAGCTGGGATGTAGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR TCA 90 bp | CCAAGTGATCATGCCAGTTTGTCTATAAAACTTCCTCAAGAAAGCTaGGTTGAACTTGGTCTCCTTGGCACAACAGCTGTTGCTCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: PSDHASLSIKLPQES*VELGLLGTTAVALG Trigger: GCCAAGAGCAACAGCTGTTGTGCCAAGGAGACCAAGTTCAACTCAGCTTTCTTGAGGAAGTTTTATAGACAAACTGGCATGATCACTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR GCA 90 bp | AAGACAGCTGCTTGTTTTCTCCTTGGTACCTTAAAAATGAGTAAGTaGCACGTCTGGAGAAAGCCCTACACACACTTGTTCCCTCTTGAG | + |
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Preference number: 1 (lower is better) Translates to: KTAACFLLGTLKMSK*HVWRKPYTHLFPLE Trigger: CTCAAGAGGGAACAAGTGTGTGTAGGGCTTTCTCCAGACGTGGCACTTACTCATTTTTAAGGTACCAAGGAGAAAACAAGCAGCTGTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR CCA 90 bp | GCTATTTCATTATACAGTACACCACAGGGAAGGGTTAGGATACACTaGTTCCCTAACGGTCCATACTTTTGTTGGCTTTCAGCCAGGACT | + |
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Preference number: 1 (lower is better) Translates to: AISLYSTPQGRVRIH*FPNGPYFCWLSART Trigger: AGTCCTGGCTGAAAGCCAACAAAAGTATGGACCGTTAGGGAACCAGTGTATCCTAACCCTTCCCTGTGGTGTACTGTATAATGAAATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR GCA 90 bp | CAAATGTTGACAAGAGGCACTGTGCTATGTGAACTAGGAAGTCTTTaGCCCAACATGTCTGCACACATTTCTAAATGGAAAGAGCACCTC | + |
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Preference number: 1 (lower is better) Translates to: QMLTRGTVLCELGSL*PNMSAHISKWKEHL Trigger: GAGGTGCTCTTTCCATTTAGAAATGTGTGCAGACATGTTGGGGCAAAGACTTCCTAGTTCACATAGCACAGTGCCTCTTGTCAACATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR GCA 90 bp | TTCCCAGAGCTTTGGAACTTTAAAATGTATACTGTTTACGACGTGTaGTTAAAGTCCATGGACATTGGCAAGCAGTACCTGCGTGATCTC | + |
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Preference number: 1 (lower is better) Translates to: FPELWNFKMYTVYDV*LKSMDIGKQYLRDL Trigger: GAGATCACGCAGGTACTGCTTGCCAATGTCCATGGACTTTAAGCACACGTCGTAAACAGTATACATTTTAAAGTTCCAAAGCTCTGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR TCA 90 bp | TCAGAAGATCATTTGAAATGCTTCGTAACATTTATGAATGTTATATaGATGGGGTGGGGGTGCTGGAGAGATGGCTCTGAGGTTAAGACC | + |
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Preference number: 1 (lower is better) Translates to: SEDHLKCFVTFMNVI*MGWGCWRDGSEVKT Trigger: GGTCTTAACCTCAGAGCCATCTCTCCAGCACCCCCACCCCATTCATATAACATTCATAAATGTTACGAAGCATTTCAAATGATCTTCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR CCA 90 bp | GAAAGAGCACCTCAGGAGTTTGACTGTGAGAATTTCCCAGAGCTTTaGAACTTTAAAATGTATACTGTTTACGACGTGTGCTTAAAGTCC | + |
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Preference number: 1 (lower is better) Translates to: ERAPQEFDCENFPEL*NFKMYTVYDVCLKS Trigger: GGACTTTAAGCACACGTCGTAAACAGTATACATTTTAAAGTTCCAAAGCTCTGGGAAATTCTCACAGTCAAACTCCTGAGGTGCTCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGGTCAGGACTCTGAGATGCCCTGCAAAGCCAGAAGTCATTTATTGCCTCCTCAGTGAACTTGCCTaGGGGAGAGGGCATGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: GRVRTLRCPAKPEVIYCLLSELA*GRGHVR Trigger: CCTGACATGCCCTCTCCCCCAGGCAAGTTCACTGAG...GAGGCAATAAATGACTTCTGGCTTTGCAGGGCATCTCAGAGTCCTGACCCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR CAA 90 bp | GCAGAGCAGCAGATTTTGAACTCCTTCCAGTGTGCCCCGTGTAGGTaGCTGCCCAGTGTTTCCACAGCCTCCAGATTGCCAAGACATGCT | + |
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Preference number: 2 (lower is better) Translates to: AEQQILNSFQCAPCR*LPSVSTASRLPRHA Trigger: AGCATGTCTTGGCAATCTGGAGGCTGTGGAAACACTGGGCAGCAACCTACACGGGGCACACTGGAAGGAGTTCAAAATCTGCTGCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR TCA 90 bp | GGTCCATACTTTTGTTGGCTTTCAGCCAGGACTGTGGCCCATGGAGGCCAAGAACCCGCAGGCAGATCCTaGGCTCTGGAGAAGTTTATC | + |
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Preference number: 2 (lower is better) Translates to: GPYFCWLSARTVAHGGQEPAGRS*ALEKFI Trigger: GATAAACTTCTCCAGAGCTCAGGATCTGCCTGCGGG...TTCTTGGCCTCCATGGGCCACAGTCCTGGCTGAAAGCCAACAAAAGTATGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR TCA 90 bp | GTACCAGTCATGATAGCAGGAGGCAGGGTCAGGACTCTGAGATGCCCTGCAAAGCACTCAGCCAAGTTCTaGTTCAGTGAGAAGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: VPVMIAGGRVRTLRCPAKHSAKF*FSEKLG Trigger: CCCCAGCTTCTCACTGAATCAGAACTTGGCTGAGTG...CTTTGCAGGGCATCTCAGAGTCCTGACCCTGCCTCCTGCTATCATGACTGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR CAA 90 bp | TGTGCCCCGTGTAGGTTGCTGCCCAGTGTTTCCACAGCCTCCAGATaGCCAAGACATGCTCCTACCCCAGGGTCAGAAGATCATTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: CAPCRLLPSVSTASR*PRHAPTPGSEDHLK Trigger: TTTCAAATGATCTTCTGACCCTGGGGTAGGAGCATGTCTTGGCAATCTGGAGGCTGTGGAAACACTGGGCAGCAACCTACACGGGGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR CAA 90 bp | TTCTGTCTGCCATCATTCCCTCTAGAAGGAGCAGAGCAGCAGATTTaGAACTCCTTCCAGTGTGCCCCGTGTAGGTTGCTGCCCAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: FCLPSFPLEGAEQQI*NSFQCAPCRLLPSV Trigger: AACACTGGGCAGCAACCTACACGGGGCACACTGGAAGGAGTTCAAAATCTGCTGCTCTGCTCCTTCTAGAGGGAATGATGGCAGACAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR CAA 90 bp | GCCGACATAAATACGCCGGTCATTAAACCTCACGGGTCATGGGCTTaGAGGAGGAAGATCTACATCCCAGCTCTGCTTGCCATCTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: ADINTPVIKPHGSWA*RRKIYIPALLAICV Trigger: CACACAGATGGCAAGCAGAGCTGGGATGTAGATCTTCCTCCTCAAAGCCCATGACCCGTGAGGTTTAATGACCGGCGTATTTATGTCGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR TCA 90 bp | CACCTCCTTGGTTCTCATGGGGAGACTTTTCCAAGTGATCATGCCAGTTTGTCTAGATCCAACACCCTCTaGCTTCTGCAGGCACCAGGC | + |
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Preference number: 2 (lower is better) Translates to: HLLGSHGETFPSDHASLSRSNTL*LLQAPG Trigger: GCCTGGTGCCTGCAGAAGTCAGAGGGTGTTGGATCT...AGACAAACTGGCATGATCACTTGGAAAAGTCTCCCCATGAGAACCAAGGAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR TCA 90 bp | GCAGGAGGCAGGGTCAGGACTCTGAGATGCCCTGCAAAGCCAGAAGTCATTTATAGGCACTGTGCTATGTaGACTAGGAAGTCTTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: AGGRVRTLRCPAKPEVIYRHCAM*TRKSLP Trigger: GGGCAAAGACTTCCTAGTTCACATAGCACAGTGCCT...ATAAATGACTTCTGGCTTTGCAGGGCATCTCAGAGTCCTGACCCTGCCTCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR GCA 90 bp | CACCTCCTTGGTTCTCATGGGGAGACTTTTCCAAGTGATCATGCCAGTTTGTCTCCCCGTGTAGGTTGCTaGCCAGTGTTTCCACAGCCT | + |
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Preference number: 2 (lower is better) Translates to: HLLGSHGETFPSDHASLSPRVGC*PVFPQP Trigger: AGGCTGTGGAAACACTGGGCAGCAACCTACACGGGG...AGACAAACTGGCATGATCACTTGGAAAAGTCTCCCCATGAGAACCAAGGAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR TCA 90 bp | CTTTTGTTGGCTTTCAGCCAGGACTGTGGCCCATGGAGGCCAAGAACAGACTTCCAAGTTCTGATTCAGTaGGAAGCTGGGGCTTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: LLLAFSQDCGPWRPRTDFQVLIQ*EAGASV Trigger: AACAGAAGCCCCAGCTTCTCACTGAATCAGAACTTG...GAAGTCTGTTCTTGGCCTCCATGGGCCACAGTCCTGGCTGAAAGCCAACAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR TCA 90 bp | GGCAGGGTCAGGACTCTGAGATGCCCTGCAAAGCCAGAAGTCATTTATTGCCTCCTGATCTCTGGGCCATaGAAAACAGTGAGCATTGTC | + |
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Preference number: 2 (lower is better) Translates to: GRVRTLRCPAKPEVIYCLLISGP*KTVSIV Trigger: GACAATGCTCACTGTTTTTCATGGCCCAGAGATCAG...GAGGCAATAAATGACTTCTGGCTTTGCAGGGCATCTCAGAGTCCTGACCCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR TCA 90 bp | GTACCAGTCATGATAGCAGGAGGCAGGGTCAGGACTCTGAGATGCCCTGCAAAGAGCACGACTATGTTCTaGTCTCTGGGCCATGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: VPVMIAGGRVRTLRCPAKSTTMF*SLGHEK Trigger: TTTTTCATGGCCCAGAGATCAGAACATAGTCGTGCT...CTTTGCAGGGCATCTCAGAGTCCTGACCCTGCCTCCTGCTATCATGACTGGTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR GCA 90 bp | CACCTCCTTGGTTCTCATGGGGAGACTTTTCCAAGTGATCATGCCAGTTTGTCTCCACAGCCTCCAGATTaGCAAGACATGCTCCTACCC | + |
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Preference number: 2 (lower is better) Translates to: HLLGSHGETFPSDHASLSPQPPD*QDMLLP Trigger: GGGTAGGAGCATGTCTTGGCAATCTGGAGGCTGTGG...AGACAAACTGGCATGATCACTTGGAAAAGTCTCCCCATGAGAACCAAGGAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGGTCAGGACTCTGAGATGCCCTGCAAAGCCAGAAGTCATTTATTGCCTCAGGGTTAGGATACACTaGTTCCCTAACGGTCCATAC | + |
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Preference number: 2 (lower is better) Translates to: GRVRTLRCPAKPEVIYCLRVRIH*FPNGPY Trigger: GTATGGACCGTTAGGGAACCAGTGTATCCTAACCCT...GAGGCAATAAATGACTTCTGGCTTTGCAGGGCATCTCAGAGTCCTGACCCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR TCA 90 bp | GGCAGGGTCAGGACTCTGAGATGCCCTGCAAAGCCAGAAGTCATTTATTGCCTCCCACACAGTCATATTTaGAAGGATACCAGCCACTTC | + |
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Preference number: 2 (lower is better) Translates to: GRVRTLRCPAKPEVIYCLPHSHI*KDTSHF Trigger: GAAGTGGCTGGTATCCTTTCAAATATGACTGTGTGG...GAGGCAATAAATGACTTCTGGCTTTGCAGGGCATCTCAGAGTCCTGACCCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR TCA 90 bp | CACCTCCTTGGTTCTCATGGGGAGACTTTTCCAAGTGATCATGCCAGTTTGTCTTGTTGCTCTTGTAGATaGCCTGGGTCCTCAGCACAC | + |
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Preference number: 2 (lower is better) Translates to: HLLGSHGETFPSDHASLSCCSCR*PGSSAH Trigger: GTGTGCTGAGGACCCAGGTCATCTACAAGAGCAACA...AGACAAACTGGCATGATCACTTGGAAAAGTCTCCCCATGAGAACCAAGGAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR CCA 90 bp | GCAGGAGGCAGGGTCAGGACTCTGAGATGCCCTGCAAAGCCAGAAGTCATTTATGATTCAGTGAGAAGCTaGGGCTTCTGTTTGTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: AGGRVRTLRCPAKPEVIYDSVRS*GFCLSL Trigger: AAGAGACAAACAGAAGCCCCAGCTTCTCACTGAATC...ATAAATGACTTCTGGCTTTGCAGGGCATCTCAGAGTCCTGACCCTGCCTCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR CCA 90 bp | GTACCAGTCATGATAGCAGGAGGCAGGGTCAGGACTCTGAGATGCCCTGCAAAGGCACACATTTCTAAATaGAAAGAGCACCTCAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: VPVMIAGGRVRTLRCPAKAHISK*KEHLRS Trigger: ACTCCTGAGGTGCTCTTTCCATTTAGAAATGTGTGC...CTTTGCAGGGCATCTCAGAGTCCTGACCCTGCCTCCTGCTATCATGACTGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR GCA 90 bp | CTGTCTGCCATCATTCCCTCTAGAAGGAGCAGAGCAGCAGATTTTGAACTCCTTCAGGCGTGCACATGGTaGACATACATACATGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: LSAIIPSRRSRAADFELLQACTW*TYIHVV Trigger: GACCACATGTATGTATGTGCACCATGTGCACGCCTG...AAGGAGTTCAAAATCTGCTGCTCTGCTCCTTCTAGAGGGAATGATGGCAGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR CCA 90 bp | CTTCACCAGCACAAACCATGGTCAGGCTCAGGAAAAGAGAGCTTTAATGCAGTCGCAGATCCTGAGCTCTaGAGAAGTTTATCTCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: LHQHKPWSGSGKESFNAVADPEL*RSLSPC Trigger: GCAGGGAGATAAACTTCTCCAGAGCTCAGGATCTGC...GACTGCATTAAAGCTCTCTTTTCCTGAGCCTGACCATGGTTTGTGCTGGTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR TCA 90 bp | AACATGTCTGCACACATTTCTAAATGGAAAGAGCACCTCAGGAGTTTGACTGTGTCAGCACACACATGGTaGCCCACAACCATCTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: NMSAHISKWKEHLRSLTVSAHTW*PTTICS Trigger: GCTGCAGATGGTTGTGGGTCACCATGTGTGTGCTGA...CACAGTCAAACTCCTGAGGTGCTCTTTCCATTTAGAAATGTGTGCAGACATGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR CCA 90 bp | CACCTCCTTGGTTCTCATGGGGAGACTTTTCCAAGTGATCATGCCAGTTTGTCTGGTCCATACTTTTGTTaGCTTTCAGCCAGGACTGTG | + |
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Preference number: 2 (lower is better) Translates to: HLLGSHGETFPSDHASLSGPYFC*LSARTV Trigger: CACAGTCCTGGCTGAAAGCCAACAAAAGTATGGACC...AGACAAACTGGCATGATCACTTGGAAAAGTCTCCCCATGAGAACCAAGGAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR TCA 90 bp | CACCTCCTTGGTTCTCATGGGGAGACTTTTCCAAGTGATCATGCCAGTTTGTCTCTTCCTCAAGAAAGCTaGGTTGAACTTGGTCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: HLLGSHGETFPSDHASLSLPQES*VELGLL Trigger: AAGGAGACCAAGTTCAACTCAGCTTTCTTGAGGAAG...AGACAAACTGGCATGATCACTTGGAAAAGTCTCCCCATGAGAACCAAGGAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR GCA 90 bp | ACATCTGTGGGGATGCGACCTTGTGATTTTAGCCGTGGCGTATTTGTTACATGGAGAAGTTTATCTCCCTaGTTCCCATCCCTTACTCTC | + |
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Preference number: 2 (lower is better) Translates to: TSVGMRPCDFSRGVFVTWRSLSP*FPSLTL Trigger: GAGAGTAAGGGATGGGAAGCAGGGAGATAAACTTCT...CCATGTAACAAATACGCCACGGCTAAAATCACAAGGTCGCATCCCCACAGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR TCA 90 bp | CCCACTCTCTCTTCTTTATATCCCAATTTTCAAGAGCAAGAAGGGCTAACAGAATCTCTGGTTTACTGCTaGAGGGAAGCACAGCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: PTLSSLYPNFQEQEGLTESLVYC*REAQPE Trigger: CTCAGGCTGTGCTTCCCTTCAGCAGTAAACCAGAGA...TTCTGTTAGCCCTTCTTGCTCTTGAAAATTGGGATATAAAGAAGAGAGAGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR TCA 90 bp | AGAAGAATCAGAGTTCTACACACCTCCTTGGTTCTCATGGGGAGACTTTTCCAATCAAGAAAGCTGAGTTaGACTTGGTCTCCTTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: RRIRVLHTSLVLMGRLFQSRKLS*TWSPWH Trigger: GTGCCAAGGAGACCAAGTTCAACTCAGCTTTCTTGA...TTGGAAAAGTCTCCCCATGAGAACCAAGGAGGTGTGTAGAACTCTGATTCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR CAA 90 bp | TGGGCCTACATAACATTGAGAAGAATCAGAGTTCTACACACCTCCTaGGTTCTCATGGGGAGACTTTTCCAAGTGATCATGCCAGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: WAYITLRRIRVLHTS*VLMGRLFQVIMPVC Trigger: ACAAACTGGCATGATCACTTGGAAAAGTCTCCCCATGAGAACCAAGGAGGTGTGTAGAACTCTGATTCTTCTCAATGTTATGTAGGCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR CAA 90 bp | GAACATCTGTGGGGATGCGACCTTGTGATTTTAGCCGTGGCGTATTaGTTACATGGAATAAAGAACATTGTGTACTCCTCAGTGAACTTG | + |
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Preference number: 2 (lower is better) Translates to: EHLWGCDLVILAVAY*LHGIKNIVYSSVNL Trigger: CAAGTTCACTGAGGAGTACACAATGTTCTTTATTCCATGTAACAAATACGCCACGGCTAAAATCACAAGGTCGCATCCCCACAGATGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| 3UTR-3UTR GCA 90 bp | TATTTGTTACATGGAATAAAGAACATTGTGTACTCCTCAGTGAACTTGCCTGGGAGCATTGTCCACACTTaGTTAGACAGGCTCTGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: YLLHGIKNIVYSSVNLPGSIVHT*LDRLCC Trigger: GCAGCAGAGCCTGTCTAAGCAAGTGTGGACAATGCT...CCCAGGCAAGTTCACTGAGGAGTACACAATGTTCTTTATTCCATGTAACAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR-3UTR GCA 90 bp | AGAAGAATCAGAGTTCTACACACCTCCTTGGTTCTCATGGGGAGACTTTTCCAATTAAAAATGAGTAAGTaGCACGTCTGGAGAAAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: RRIRVLHTSLVLMGRLFQLKMSK*HVWRKP Trigger: GGGCTTTCTCCAGACGTGGCACTTACTCATTTTTAA...TTGGAAAAGTCTCCCCATGAGAACCAAGGAGGTGTGTAGAACTCTGATTCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR TCA 72 bp | TGCCCTCAGGGGTCAATTTGCCCCGCAGGCAGATCCTaGGCTCTGGAGAAGTTTATCTCCCTGCTTCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: CPQGSICPAGRS*ALEKFISLLPI Trigger: GATGGGAAGCAGGGAGATAAACTTCTCCAGAGCTCAGGATCTGCCTGCGGGGCAAATTGACCCCTGAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR CCA 72 bp | CCAGAGTCCAACCTACAGAGTCCACACAGCTGTGTGTaGTCTCACACACTGGCGTGTGCATGCCTGCACTCA | + |
|
Preference number: 3 (lower is better) Translates to: PESNLQSPHSCV*SHTLACACLHS Trigger: TGAGTGCAGGCATGCACACGCCAGTGTGTGAGACCACACACAGCTGTGTGGACTCTGTAGGTTGGACTCTGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGGGTCAGGACTCTGAGATGCCCTGCAAAGCCAGAAGTCATTTATTGCCTCTACTCCTCAGTGAACTaGCCTGGGGGAGAGGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: GRVRTLRCPAKPEVIYCLYSSVN*PGGEGM Trigger: CATGCCCTCTCCCCCAGGCAAGTTCACTGAGGAGTA...GAGGCAATAAATGACTTCTGGCTTTGCAGGGCATCTCAGAGTCCTGACCCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR TCA 72 bp | TGGACATTGGCAAGCAGTACCTGCGTGATCTCTAGTTaGGCTTGTAACGGGGCCCTTCCCTCCCCCAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: WTLASSTCVISS*ACNGALPSPRV Trigger: AACTCTGGGGGAGGGAAGGGCCCCGTTACAAGCTCAACTAGAGATCACGCAGGTACTGCTTGCCAATGTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR GCA 72 bp | GTAGGTTGCTGCCCAGTGTTTCCACAGCCTCCAGATTaGCAAGACATGCTCCTACCCCAGGGTCAGAAGATC | + |
|
Preference number: 3 (lower is better) Translates to: VGCCPVFPQPPD*QDMLLPQGQKI Trigger: GATCTTCTGACCCTGGGGTAGGAGCATGTCTTGGCAATCTGGAGGCTGTGGAAACACTGGGCAGCAACCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR TCA 72 bp | TCCCTGCTTCCCATCCCTTACTCTCTGGTTTACTGCTaGAGGGAAGCACAGCCTGAGTGGGGTTGGTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLLPIPYSLVYC*REAQPEWGWFL Trigger: CAGAAACCAACCCCACTCAGGCTGTGCTTCCCTTCAGCAGTAAACCAGAGAGTAAGGGATGGGAAGCAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR GCA 72 bp | CACAGCTGTGTGTGGTCTCACACACTGGCGTGTGCATaGCTGCACTCATACACACCATGGGCCTACATAACA | + |
|
Preference number: 3 (lower is better) Translates to: HSCVWSHTLACA*LHSYTPWAYIT Trigger: TGTTATGTAGGCCCATGGTGTGTATGAGTGCAGGCATGCACACGCCAGTGTGTGAGACCACACACAGCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR CCA 72 bp | AGGGGTCAATTTGCCCCGCAGGCAGATCCTGAGCTCTaGAGAAGTTTATCTCCCTGCTTCCCATCCCTTACT | + |
|
Preference number: 3 (lower is better) Translates to: RGQFAPQADPEL*RSLSPCFPSLT Trigger: AGTAAGGGATGGGAAGCAGGGAGATAAACTTCTCCAGAGCTCAGGATCTGCCTGCGGGGCAAATTGACCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR CCA 72 bp | TATGCTCAGGAGGCCCAGCAGATGAGGCAGGGAATCTaGTTCTGTCTGCCATCATTCCCTCTAGAAGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: YAQEAQQMRQGI*FCLPSFPLEGA Trigger: TGCTCCTTCTAGAGGGAATGATGGCAGACAGAACCAGATTCCCTGCCTCATCTGCTGGGCCTCCTGAGCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR TCA 72 bp | ATACGCCGGTCATTAAACCTCACGGGTCATGGGCTTTaGGGAGGAAGATCTACATCCCAGCTCTGCTTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: IRRSLNLTGHGL*GGRSTSQLCLP Trigger: TGGCAAGCAGAGCTGGGATGTAGATCTTCCTCCTCAAAGCCCATGACCCGTGAGGTTTAATGACCGGCGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR GCA 72 bp | GTGAGCATTGTCCACACTTGCTTAGACAGGCTCTGCTaGCTCGAGGCGGACAGCCACACAGTCATATTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: VSIVHTCLDRLC*LEADSHTVIFE Trigger: TTCAAATATGACTGTGTGGCTGTCCGCCTCGAGGCAGCAGAGCCTGTCTAAGCAAGTGTGGACAATGCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR CCA 72 bp | GGGATGCGGATTGGGGCACTTCACCAGCACAAACCATaGTCAGGCTCAGGAAAAGAGAGCTTTAATGCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: GMRIGALHQHKP*SGSGKESFNAV Trigger: GACTGCATTAAAGCTCTCTTTTCCTGAGCCTGACCATGGTTTGTGCTGGTGAAGTGCCCCAATCCGCATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR CCA 72 bp | AGGATACACTGGTTCCCTAACGGTCCATACTTTTGTTaGCTTTCAGCCAGGACTGTGGCCCATGGAGGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: RIHWFPNGPYFC*LSARTVAHGGQ Trigger: TTGGCCTCCATGGGCCACAGTCCTGGCTGAAAGCCAACAAAAGTATGGACCGTTAGGGAACCAGTGTATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAAGTACCAGTCATGATAGCAGGAGGCAGGGTCAGGACTCTGAGATGCCCTGACCGAAAGCAAATGTaGACAAGAGGCACTGTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: KEVPVMIAGGRVRTLRCPDRKQM*TRGTVL Trigger: TAGCACAGTGCCTCTTGTCAACATTTGCTTTCGGTC...AGGGCATCTCAGAGTCCTGACCCTGCCTCCTGCTATCATGACTGGTACTTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR TCA 72 bp | CTGCTGCCTCGAGGCGGACAGCCACACAGTCATATTTaGAAGGATACCAGCCACTTCTTCCATCAACATAGG | + |
|
Preference number: 3 (lower is better) Translates to: LLPRGGQPHSHI*KDTSHFFHQHR Trigger: CCTATGTTGATGGAAGAAGTGGCTGGTATCCTTTCAAATATGACTGTGTGGCTGTCCGCCTCGAGGCAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR TCA 72 bp | GCAGCCAACCTTCTTAAGCTCCCCAAATCCATTAGTTaGAGGCCTAACTTGAAGTGGGCACTCTTCCCACGG | + |
|
Preference number: 3 (lower is better) Translates to: AANLLKLPKSIS*RPNLKWALFPR Trigger: CCGTGGGAAGAGTGCCCACTTCAAGTTAGGCCTTCAACTAATGGATTTGGGGAGCTTAAGAAGGTTGGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR GCA 72 bp | GCCCAGTGTTTCCACAGCCTCCAGATTGCCAAGACATaGTCCTACCCCAGGGTCAGAAGATCATTTGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: AQCFHSLQIAKT*SYPRVRRSFEM Trigger: CATTTCAAATGATCTTCTGACCCTGGGGTAGGAGCATGTCTTGGCAATCTGGAGGCTGTGGAAACACTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR-3UTR CAA 90 bp | CACCTCCTTGGTTCTCATGGGGAGACTTTTCCAAGTGATCATGCCAGTTTGTCTGCAGAGCAGCAGATTTaGAACTCCTTCCAGTGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: HLLGSHGETFPSDHASLSAEQQI*NSFQCA Trigger: GGCACACTGGAAGGAGTTCAAAATCTGCTGCTCTGC...AGACAAACTGGCATGATCACTTGGAAAAGTCTCCCCATGAGAACCAAGGAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR GCA 72 bp | CCCTCTGACTTCTGCAGGCACCAGGCGTGCACATGGTaGACATACATACATGTGGTCAAAACACTCGTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: PSDFCRHQACTW*TYIHVVKTLVN Trigger: ATTTACGAGTGTTTTGACCACATGTATGTATGTGCACCATGTGCACGCCTGGTGCCTGCAGAAGTCAGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR CCA 72 bp | ATACTTTTGTTGGCTTTCAGCCAGGACTGTGGCCCATaGAGGCCAAGAACAGACTTCCATTATGAGCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: ILLLAFSQDCGP*RPRTDFHYEHL Trigger: GAGGTGCTCATAATGGAAGTCTGTTCTTGGCCTCCATGGGCCACAGTCCTGGCTGAAAGCCAACAAAAGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR-3UTR CAA 90 bp | CACCTCCTTGGTTCTCATGGGGAGACTTTTCCAAGTGATCATGCCAGTTTGTCTGAGCACCTCAGGAGTTaGACTGTGAGAATTTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: HLLGSHGETFPSDHASLSEHLRS*TVRISQ Trigger: CTGGGAAATTCTCACAGTCAAACTCCTGAGGTGCTC...AGACAAACTGGCATGATCACTTGGAAAAGTCTCCCCATGAGAACCAAGGAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR TCA 72 bp | CTGTGGCCCATGGAGGCCAAGAACAGACTTCCATTATaGGCACCTCACTGCATAGTCGAACTGCCTTTTATA | + |
|
Preference number: 3 (lower is better) Translates to: LWPMEAKNRLPL*APHCIVELPFI Trigger: TATAAAAGGCAGTTCGACTATGCAGTGAGGTGCTCATAATGGAAGTCTGTTCTTGGCCTCCATGGGCCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR TCA 72 bp | CCCAGCTCTGCTTGCCATCTGTGTGGTTGTGAAGAATaGTCAACTGACCGAAAGCAAATGTTGACAAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: PSSACHLCGCEE*STDRKQMLTRG Trigger: GCCTCTTGTCAACATTTGCTTTCGGTCAGTTGATCATTCTTCACAACCACACAGATGGCAAGCAGAGCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR CCA 72 bp | AATAAAGAACATTGTGTACTCCTCAGTGAACTTGCCTaGGGGAGAGGGCATGTCAGGTTAAAGACCCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: NKEHCVLLSELA*GRGHVRLKTQW Trigger: CCACTGGGTCTTTAACCTGACATGCCCTCTCCCCCAGGCAAGTTCACTGAGGAGTACACAATGTTCTTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR TCA 72 bp | CCGAAAGCAAATGTTGACAAGAGGCACTGTGCTATGTaGACTAGGAAGTCTTTGCCCCAACATGTCTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: PKANVDKRHCAM*TRKSLPQHVCT Trigger: TGTGCAGACATGTTGGGGCAAAGACTTCCTAGTTCACATAGCACAGTGCCTCTTGTCAACATTTGCTTTCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR CCA 72 bp | ACACTGGCGTGTGCATGCCTGCACTCATACACACCATaGGCCTACATAACATTGAGAAGAATCAGAGTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: TLACACLHSYTP*AYITLRRIRVL Trigger: TAGAACTCTGATTCTTCTCAATGTTATGTAGGCCCATGGTGTGTATGAGTGCAGGCATGCACACGCCAGTGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR TCA 72 bp | CTTGAAGTGGGCACTCTTCCCACGGTTAAGAAGACCTaGTCCCTTTCAGAGTTTAAAATAGAAGCACGACTA | + |
|
Preference number: 3 (lower is better) Translates to: LEVGTLPTVKKT*SLSEFKIEARL Trigger: TAGTCGTGCTTCTATTTTAAACTCTGAAAGGGATCAGGTCTTCTTAACCGTGGGAAGAGTGCCCACTTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR GCA 72 bp | GCTTGTTTTCTCCTTGGTACCTTAAAAATGAGTAAGTaGCACGTCTGGAGAAAGCCCTACACACACTTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: ACFLLGTLKMSK*HVWRKPYTHLF Trigger: GAACAAGTGTGTGTAGGGCTTTCTCCAGACGTGGCACTTACTCATTTTTAAGGTACCAAGGAGAAAACAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR CCA 72 bp | TTATACAGTACACCACAGGGAAGGGTTAGGATACACTaGTTCCCTAACGGTCCATACTTTTGTTGGCTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LYSTPQGRVRIH*FPNGPYFCWLS Trigger: TGAAAGCCAACAAAAGTATGGACCGTTAGGGAACCAGTGTATCCTAACCCTTCCCTGTGGTGTACTGTATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR-3UTR CAA 90 bp | AACATGTCTGCACACATTTCTAAATGGAAAGAGCACCTCAGGAGTTTGACTGTGGCCACACAGTCATATTaGAAAGGATACCAGCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: NMSAHISKWKEHLRSLTVATQSY*KGYQPL Trigger: AAGTGGCTGGTATCCTTTCAAATATGACTGTGTGGC...CACAGTCAAACTCCTGAGGTGCTCTTTCCATTTAGAAATGTGTGCAGACATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGAATCAGAGTTCTACACACCTCCTTGGTTCTCATGGGGAGACTTTTCCAATACAAAGACAGCTGCTaGTTTTCTCCTTGGTACCTT | + |
|
Preference number: 3 (lower is better) Translates to: RRIRVLHTSLVLMGRLFQYKDSC*FSPWYL Trigger: AAGGTACCAAGGAGAAAACAAGCAGCTGTCTTTGTA...TTGGAAAAGTCTCCCCATGAGAACCAAGGAGGTGTGTAGAACTCTGATTCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR TCA 72 bp | ATGCCCTGCAAAGCCAGAAGTCATTTATTGCCTCAGTaGTTAACTGCCGACATAAATACGCCGGTCATTAAA | + |
|
Preference number: 3 (lower is better) Translates to: MPCKARSHLLPQ*LTADINTPVIK Trigger: TTTAATGACCGGCGTATTTATGTCGGCAGTTAATCACTGAGGCAATAAATGACTTCTGGCTTTGCAGGGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR TCA 72 bp | CATGCCAGTTTGTCTATAAAACTTCCTCAAGAAAGCTaGGTTGAACTTGGTCTCCTTGGCACAACAGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: HASLSIKLPQES*VELGLLGTTAV Trigger: AACAGCTGTTGTGCCAAGGAGACCAAGTTCAACTCAGCTTTCTTGAGGAAGTTTTATAGACAAACTGGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR GCA 72 bp | ACAAGAGGCACTGTGCTATGTGAACTAGGAAGTCTTTaGCCCAACATGTCTGCACACATTTCTAAATGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TRGTVLCELGSL*PNMSAHISKWK Trigger: TTTCCATTTAGAAATGTGTGCAGACATGTTGGGGCAAAGACTTCCTAGTTCACATAGCACAGTGCCTCTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR GCA 72 bp | CTTTGGAACTTTAAAATGTATACTGTTTACGACGTGTaGTTAAAGTCCATGGACATTGGCAAGCAGTACCTG | + |
|
Preference number: 3 (lower is better) Translates to: LWNFKMYTVYDV*LKSMDIGKQYL Trigger: CAGGTACTGCTTGCCAATGTCCATGGACTTTAAGCACACGTCGTAAACAGTATACATTTTAAAGTTCCAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR TCA 90 bp | TGGCTTTCAGCCAGGACTGTGGCCCATGGAGGCCAAGAACAGACTTCCATTATGTGTCCCGGACCGACTTaGCTCCTGCAGTGTACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: WLSARTVAHGGQEQTSIMCPGPT*LLQCTA Trigger: GGCAGTACACTGCAGGAGTCAAGTCGGTCCGGGACA...CATAATGGAAGTCTGTTCTTGGCCTCCATGGGCCACAGTCCTGGCTGAAAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR TCA 90 bp | GCAGGAGGCAGGGTCAGGACTCTGAGATGCCCTGCAAAGCCAGAAGTCATTTATCTGGGCATTGTTCCCTaGGCCTTGCTGCCTGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGGRVRTLRCPAKPEVIYLGIVP*ALLPDS Trigger: GGAATCAGGCAGCAAGGCTCAGGGAACAATGCCCAG...ATAAATGACTTCTGGCTTTGCAGGGCATCTCAGAGTCCTGACCCTGCCTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR GCA 90 bp | TGGCTTTCAGCCAGGACTGTGGCCCATGGAGGCCAAGAACAGACTTCCATTATGCGCCACGACCTTCTCTaGCTGCACAGAGGCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WLSARTVAHGGQEQTSIMRHDLL*LHRGKK Trigger: CTTCTTGCCTCTGTGCAGGCAGAGAAGGTCGTGGCG...CATAATGGAAGTCTGTTCTTGGCCTCCATGGGCCACAGTCCTGGCTGAAAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGTACCAGTCATGATAGCAGGAGGCAGGGTCAGGACTCTGAGATGCCCTTGCAGACGTTCCTTTTaGGGCGGGTGGAGACCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KEVPVMIAGGRVRTLRCPCRRSF*GGWRPR Trigger: ACGAGGTCTCCACCCGCCCCAAAAGGAACGTCTGCA...AGGGCATCTCAGAGTCCTGACCCTGCCTCCTGCTATCATGACTGGTACTTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR CCA 90 bp | CTTTTGTTGGCTTTCAGCCAGGACTGTGGCCCATGGAGGCCAAGAACAGACTTCCCCTTTCCTTGGCCCTaGGCATTGTTCCCTGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLAFSQDCGPWRPRTDFPFPWP*ALFPEP Trigger: AGGCTCAGGGAACAATGCCCAGGGCCAAGGAAAGGG...GAAGTCTGTTCTTGGCCTCCATGGGCCACAGTCCTGGCTGAAAGCCAACAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR CCA 90 bp | GTACCAGTCATGATAGCAGGAGGCAGGGTCAGGACTCTGAGATGCCCTGCAAAGACTTCCGGTGGACCATaGGTTTCAGTGGGTAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VPVMIAGGRVRTLRCPAKTSGGP*VSVGKP Trigger: GGGCTTACCCACTGAAACCCATGGTCCACCGGAAGT...CTTTGCAGGGCATCTCAGAGTCCTGACCCTGCCTCCTGCTATCATGACTGGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGTCAGGACTCTGAGATGCCCTGCAAAGCCAGAAGTCATTTATTGCCTCTTGCTGCCTGATTCCTaGACTGTGGGGACAGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRVRTLRCPAKPEVIYCLLLPDS*TVGTGV Trigger: CACTCCTGTCCCCACAGTGCAGGAATCAGGCAGCAA...GAGGCAATAAATGACTTCTGGCTTTGCAGGGCATCTCAGAGTCCTGACCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGTCAGGACTCTGAGATGCCCTGCAAAGCCAGAAGTCATTTATTGCCTCTTCCCTGAGCCTTGCTaGCTGATTCCTGCACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRVRTLRCPAKPEVIYCLFPEPC*LIPALW Trigger: CCACAGTGCAGGAATCAGGCAGCAAGGCTCAGGGAA...GAGGCAATAAATGACTTCTGGCTTTGCAGGGCATCTCAGAGTCCTGACCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR GCA 90 bp | GGTCCATACTTTTGTTGGCTTTCAGCCAGGACTGTGGCCCATGGAGGCCAAGAATGGACCCTTGCATCTTaGCACAGACGGTGGAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GPYFCWLSARTVAHGGQEWTLAS*HRRWSV Trigger: GACACTCCACCGTCTGTGGCAAGATGCAAGGGTCCA...TTCTTGGCCTCCATGGGCCACAGTCCTGGCTGAAAGCCAACAAAAGTATGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGTACCAGTCATGATAGCAGGAGGCAGGGTCAGGACTCTGAGATGCCCTCCTTCGCCCGGGCCCTaGAAGAGTCAAACACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KEVPVMIAGGRVRTLRCPPSPGP*KSQTLF Trigger: GAAAAGTGTTTGACTCTTCCAGGGCCCGGGCGAAGG...AGGGCATCTCAGAGTCCTGACCCTGCCTCCTGCTATCATGACTGGTACTTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGTCAGGACTCTGAGATGCCCTGCAAAGCCAGAAGTCATTTATTGCCTCTTTCAGCCTTGGCTGTaGCTGGTCCCCTCCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRVRTLRCPAKPEVIYCLFQPWL*LVPSSS Trigger: TGAACTGGAGGGGACCAGCCACAGCCAAGGCTGAAA...GAGGCAATAAATGACTTCTGGCTTTGCAGGGCATCTCAGAGTCCTGACCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR CAA 72 bp | TGTAGGTTGCTGCCCAGTGTTTCCACAGCCTCCAGATaGCCAAGACATGCTCCTACCCCAGGGTCAGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: CRLLPSVSTASR*PRHAPTPGSED Trigger: ATCTTCTGACCCTGGGGTAGGAGCATGTCTTGGCAATCTGGAGGCTGTGGAAACACTGGGCAGCAACCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR CAA 72 bp | CAGATTTTGAACTCCTTCCAGTGTGCCCCGTGTAGGTaGCTGCCCAGTGTTTCCACAGCCTCCAGATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QILNSFQCAPCR*LPSVSTASRLP Trigger: TGGCAATCTGGAGGCTGTGGAAACACTGGGCAGCAACCTACACGGGGCACACTGGAAGGAGTTCAAAATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR CAA 72 bp | GTTGAGCTTGTAACGGGGCCCTTCCCTCCCCCAGAGTaGGAGCTAGCTAAATTCCCAAGGCTGACAATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VELVTGPFPPPE*ELAKFPRLTIK Trigger: CTTGATTGTCAGCCTTGGGAATTTAGCTAGCTCCAACTCTGGGGGAGGGAAGGGCCCCGTTACAAGCTCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGTACCAGTCATGATAGCAGGAGGCAGGGTCAGGACTCTGAGATGCCCTTTGTTCCCTGAGCCTTaGTGCCTGATTCCTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KEVPVMIAGGRVRTLRCPLFPEP*CLIPAL Trigger: CAGTGCAGGAATCAGGCAGCAAGGCTCAGGGAACAA...AGGGCATCTCAGAGTCCTGACCCTGCCTCCTGCTATCATGACTGGTACTTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR CCA 90 bp | CACCTCCTTGGTTCTCATGGGGAGACTTTTCCAAGTGATCATGCCAGTTTGTCTGCTCTGGCTCTTCTGTaGAGGAGCTGGACCCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLLGSHGETFPSDHASLSALALL*RSWTQR Trigger: CCTCTGGGTCCAGCTCCTCCACAGAAGAGCCAGAGC...AGACAAACTGGCATGATCACTTGGAAAAGTCTCCCCATGAGAACCAAGGAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR CAA 72 bp | AATACGCCGGTCATTAAACCTCACGGGTCATGGGCTTaGAGGAGGAAGATCTACATCCCAGCTCTGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NTPVIKPHGSWA*RRKIYIPALLA Trigger: GGCAAGCAGAGCTGGGATGTAGATCTTCCTCCTCAAAGCCCATGACCCGTGAGGTTTAATGACCGGCGTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR TCA 90 bp | CTTCACCAGCACAAACCATGGTCAGGCTCAGGAAAAGAGAGCTTTAATGCAGTCGATGGAAGGCAAGTCTaGGGGATTGCCACCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LHQHKPWSGSGKESFNAVDGRQV*GIATSG Trigger: GCCAGAGGTGGCAATCCCTCAGACTTGCCTTCCATC...GACTGCATTAAAGCTCTCTTTTCCTGAGCCTGACCATGGTTTGTGCTGGTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR CCA 90 bp | ACATCTGTGGGGATGCGACCTTGTGATTTTAGCCGTGGCGTATTTGTTACATGGCCCATCGAGGGCCGCTaGGAAGAGTCACTTTGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: TSVGMRPCDFSRGVFVTWPIEGR*EESLCS Trigger: CGAACAAAGTGACTCTTCCCAGCGGCCCTCGATGGG...CCATGTAACAAATACGCCACGGCTAAAATCACAAGGTCGCATCCCCACAGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR CCA 90 bp | AGAAGAATCAGAGTTCTACACACCTCCTTGGTTCTCATGGGGAGACTTTTCCAAGGCGTTCAGCCACCTTaGGAGCAAAGTGGCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRIRVLHTSLVLMGRLFQGVQPP*EQSGGC Trigger: GCAGCCGCCACTTTGCTCCCAAGGTGGCTGAACGCC...TTGGAAAAGTCTCCCCATGAGAACCAAGGAGGTGTGTAGAACTCTGATTCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR CCA 90 bp | CTGTCTGCCATCATTCCCTCTAGAAGGAGCAGAGCAGCAGATTTTGAACTCCTTCCTCCTTGGCGGCGGTaGTCGGTTCTTGATGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSAIIPSRRSRAADFELLPPWRR*SVLDGL Trigger: AAGACCATCAAGAACCGACCACCGCCGCCAAGGAGG...AAGGAGTTCAAAATCTGCTGCTCTGCTCCTTCTAGAGGGAATGATGGCAGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR GCA 90 bp | AACATGTCTGCACACATTTCTAAATGGAAAGAGCACCTCAGGAGTTTGACTGTGACTGCTCTAGTTCTGTaGCCTTCGCCCGGGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NMSAHISKWKEHLRSLTVTALVL*PSPGPW Trigger: CCAGGGCCCGGGCGAAGGGCACAGAACTAGAGCAGT...CACAGTCAAACTCCTGAGGTGCTCTTTCCATTTAGAAATGTGTGCAGACATGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR GCA 90 bp | CTTTTGTTGGCTTTCAGCCAGGACTGTGGCCCATGGAGGCCAAGAACAGACTTCCTCCAGTTCAAGTACTaGTCTAGTTCTGTGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLAFSQDCGPWRPRTDFLQFKY*SSSVPF Trigger: GAAGGGCACAGAACTAGAGCAGTACTTGAACTGGAG...GAAGTCTGTTCTTGGCCTCCATGGGCCACAGTCCTGGCTGAAAGCCAACAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR CCA 90 bp | AGAAGAATCAGAGTTCTACACACCTCCTTGGTTCTCATGGGGAGACTTTTCCAACTTCTGTGGAGGAGCTaGACCCAGAGGAGCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RRIRVLHTSLVLMGRLFQLLWRS*TQRSLV Trigger: CACCAGGCTCCTCTGGGTCCAGCTCCTCCACAGAAG...TTGGAAAAGTCTCCCCATGAGAACCAAGGAGGTGTGTAGAACTCTGATTCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR CCA 90 bp | GCAGGAGGCAGGGTCAGGACTCTGAGATGCCCTGCAAAGCCAGAAGTCATTTATACACTGAACATAGTCTaGGTTGTCTGCAGGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AGGRVRTLRCPAKPEVIYTLNIV*VVCRQD Trigger: ATCCTGCCTGCAGACAACCCAGACTATGTTCAGTGT...ATAAATGACTTCTGGCTTTGCAGGGCATCTCAGAGTCCTGACCCTGCCTCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR CCA 90 bp | GCAGGAGGCAGGGTCAGGACTCTGAGATGCCCTGCAAAGCCAGAAGTCATTTATTTACACTTAGGTATGTaGCGTTCAGCCACCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGGRVRTLRCPAKPEVIYLHLGM*RSATLG Trigger: TCCCAAGGTGGCTGAACGCCACATACCTAAGTGTAA...ATAAATGACTTCTGGCTTTGCAGGGCATCTCAGAGTCCTGACCCTGCCTCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR TCA 90 bp | TTTTATAAGAGTTACCATCTGTGTGACAGTAGTACTCCGACCCCACTCTCTCTTCTGAGCCTTGCTGCCTaGTTCCTGCACTGTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FYKSYHLCDSSTPTPLSLLSLAA*FLHCGD Trigger: GTCCCCACAGTGCAGGAATCAGGCAGCAAGGCTCAG...AAGAGAGAGTGGGGTCGGAGTACTACTGTCACACAGATGGTAACTCTTATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR TCA 90 bp | ACATCTGTGGGGATGCGACCTTGTGATTTTAGCCGTGGCGTATTTGTTACATGGAGTGTCTCTGCAGCCTaGGGGAAAGAAACGATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: TSVGMRPCDFSRGVFVTWSVSAA*GKETIV Trigger: GACGATCGTTTCTTTCCCTCAGGCTGCAGAGACACT...CCATGTAACAAATACGCCACGGCTAAAATCACAAGGTCGCATCCCCACAGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR GCA 90 bp | ACATCTGTGGGGATGCGACCTTGTGATTTTAGCCGTGGCGTATTTGTTACATGGGAGACCTCGTCCTCCTaGTCCATTTCTGTGTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TSVGMRPCDFSRGVFVTWETSSS*SISVLL Trigger: GAGCAACACAGAAATGGAGCAGGAGGACGAGGTCTC...CCATGTAACAAATACGCCACGGCTAAAATCACAAGGTCGCATCCCCACAGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR GCA 90 bp | TTTTATAAGAGTTACCATCTGTGTGACAGTAGTACTCCGACCCCACTCTCTCTTCTGTGGGGACAGGAGTaGCTCCGGGCTTTTGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FYKSYHLCDSSTPTPLSLLWGQE*LRAFVQ Trigger: CTGCACAAAAGCCCGGAGGCACTCCTGTCCCCACAG...AAGAGAGAGTGGGGTCGGAGTACTACTGTCACACAGATGGTAACTCTTATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR GCA 90 bp | AGAAGAATCAGAGTTCTACACACCTCCTTGGTTCTCATGGGGAGACTTTTCCAAACTCCTGCAGTGTACTaGCCAGCTCCTCTGCCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RRIRVLHTSLVLMGRLFQTPAVY*PAPLPV Trigger: AACCGGCAGAGGAGCTGGGCAGTACACTGCAGGAGT...TTGGAAAAGTCTCCCCATGAGAACCAAGGAGGTGTGTAGAACTCTGATTCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR GCA 90 bp | GCTTTAATGCAGTCCTCACCTACCAAGTCTTCAGGCAAGAACATAAACACTCAGATCGTCCACAGTGGCTaGACTTGGCCAGCTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALMQSSPTKSSGKNINTQIVHSG*TWPALA Trigger: AGCCAGAGCTGGCCAAGTGCAGCCACTGTGGACGAT...CTGAGTGTTTATGTTCTTGCCTGAAGACTTGGTAGGTGAGGACTGCATTAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR GCA 90 bp | CACCTCCTTGGTTCTCATGGGGAGACTTTTCCAAGTGATCATGCCAGTTTGTCTGCAAGTCTGAGGGATTaGCACCTCTGGCGATTACCT | + |
|
Preference number: 4 (lower is better) Translates to: HLLGSHGETFPSDHASLSASLRD*HLWRLP Trigger: AGGTAATCGCCAGAGGTGGCAATCCCTCAGACTTGC...AGACAAACTGGCATGATCACTTGGAAAAGTCTCCCCATGAGAACCAAGGAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR CCA 90 bp | GCTTTAATGCAGTCCTCACCTACCAAGTCTTCAGGCAAGAACATAAACACTCAGCACAGTGGCTGCACTTaGCCAGCTCTGGCTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALMQSSPTKSSGKNINTQHSGCT*PALALL Trigger: CAGAAGAGCCAGAGCTGGCCAAGTGCAGCCACTGTG...CTGAGTGTTTATGTTCTTGCCTGAAGACTTGGTAGGTGAGGACTGCATTAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR CCA 90 bp | GCTTTAATGCAGTCCTCACCTACCAAGTCTTCAGGCAAGAACATAAACACTCAGAACGATCGTCCACAGTaGCTGCACTTGGCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALMQSSPTKSSGKNINTQNDRPQ*LHLASS Trigger: AGAGCTGGCCAAGTGCAGCCACTGTGGACGATCGTT...CTGAGTGTTTATGTTCTTGCCTGAAGACTTGGTAGGTGAGGACTGCATTAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR CAA 72 bp | AAAGTGCAGAAGGGGGAAAAGCCATTAAAGGAAGGATaGTCAGCAGGTCAAGAGTGGCTTGCTAGGCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: KVQKGEKPLKEG*SAGQEWLARHS Trigger: TGAGTGCCTAGCAAGCCACTCTTGACCTGCTGACAATCCTTCCTTTAATGGCTTTTCCCCCTTCTGCACTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR GCA 90 bp | GCTTTAATGCAGTCCTCACCTACCAAGTCTTCAGGCAAGAACATAAACACTCAGACGGTGGAGTGTCTCTaGAGCCTGAGGGAAAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ALMQSSPTKSSGKNINTQTVECL*SLRERN Trigger: GTTTCTTTCCCTCAGGCTGCAGAGACACTCCACCGT...CTGAGTGTTTATGTTCTTGCCTGAAGACTTGGTAGGTGAGGACTGCATTAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR CCA 90 bp | TTTTATAAGAGTTACCATCTGTGTGACAGTAGTACTCCGACCCCACTCTCTCTTGACCATGGGTTTCAGTaGGTAAGCCCGATCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: FYKSYHLCDSSTPTPLSLDHGFQ*VSPIHS Trigger: GGAGTGGATCGGGCTTACCCACTGAAACCCATGGTC...AAGAGAGAGTGGGGTCGGAGTACTACTGTCACACAGATGGTAACTCTTATAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR CCA 90 bp | GGTCCATACTTTTGTTGGCTTTCAGCCAGGACTGTGGCCCATGGAGGCCAAGAAGGATTTTACTGTTACTaGCCATCAGTCTTTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GPYFCWLSARTVAHGGQEGFYCY*PSVFPF Trigger: AAAGGGAAAGACTGATGGCCAGTAACAGTAAAATCC...TTCTTGGCCTCCATGGGCCACAGTCCTGGCTGAAAGCCAACAAAAGTATGGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR GCA 90 bp | GCTTTAATGCAGTCCTCACCTACCAAGTCTTCAGGCAAGAACATAAACACTCAGACGACCTTCTCTGCCTaGACAGAGGCAAGAAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ALMQSSPTKSSGKNINTQTTFSA*TEARRD Trigger: ATCTCTTCTTGCCTCTGTGCAGGCAGAGAAGGTCGT...CTGAGTGTTTATGTTCTTGCCTGAAGACTTGGTAGGTGAGGACTGCATTAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR GCA 90 bp | CACCTCCTTGGTTCTCATGGGGAGACTTTTCCAAGTGATCATGCCAGTTTGTCTTGTTTCTTTTCCTTCTaGATCCTTCGAAGACCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLLGSHGETFPSDHASLSCFFSF*ILRRPS Trigger: GGAGGGTCTTCGAAGGATGCAGAAGGAAAAGAAACA...AGACAAACTGGCATGATCACTTGGAAAAGTCTCCCCATGAGAACCAAGGAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR GCA 90 bp | GCTTTAATGCAGTCCTCACCTACCAAGTCTTCAGGCAAGAACATAAACACTCAGATAGTCTGGGTTGTCTaGAGGCAGGATGGAAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ALMQSSPTKSSGKNINTQIVWVV*RQDGRQ Trigger: TTGCCTTCCATCCTGCCTGCAGACAACCCAGACTAT...CTGAGTGTTTATGTTCTTGCCTGAAGACTTGGTAGGTGAGGACTGCATTAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR CCA 90 bp | AACATGTCTGCACACATTTCTAAATGGAAAGAGCACCTCAGGAGTTTGACTGTGAACAGACCCTTTCCTTaGCCCTGGGCATTGTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NMSAHISKWKEHLRSLTVNRPFP*PWALFP Trigger: AGGGAACAATGCCCAGGGCCAAGGAAAGGGTCTGTT...CACAGTCAAACTCCTGAGGTGCTCTTTCCATTTAGAAATGTGTGCAGACATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR CCA 90 bp | CCCACTCTCTCTTCTTTATATCCCAATTTTCAAGAGCAAGAAGGGCTAACAGAAAGCCTTGGCTGTGGCTaGTCCCCTCCAGTTCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PTLSSLYPNFQEQEGLTESLGCG*SPPVQV Trigger: TACTTGAACTGGAGGGGACCAGCCACAGCCAAGGCT...TTCTGTTAGCCCTTCTTGCTCTTGAAAATTGGGATATAAAGAAGAGAGAGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR CAA 72 bp | AACTTCCTCAAGAAAGCTGAGTTGAACTTGGTCTCCTaGGCACAACAGCTGTTGCTCTTGGCTGAACATCAC | + |
|
Preference number: 4 (lower is better) Translates to: NFLKKAELNLVS*AQQLLLLAEHH Trigger: GTGATGTTCAGCCAAGAGCAACAGCTGTTGTGCCAAGGAGACCAAGTTCAACTCAGCTTTCTTGAGGAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR CCA 90 bp | CCCACTCTCTCTTCTTTATATCCCAATTTTCAAGAGCAAGAAGGGCTAACAGAACTCAGACCTGAACTCTaGGGACAAGCAGGGTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PTLSSLYPNFQEQEGLTELRPEL*GQAGFV Trigger: CACAAACCCTGCTTGTCCCCAGAGTTCAGGTCTGAG...TTCTGTTAGCCCTTCTTGCTCTTGAAAATTGGGATATAAAGAAGAGAGAGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR CAA 72 bp | TGCCTGCACTCATACACACCATGGGCCTACATAACATaGAGAAGAATCAGAGTTCTACACACCTCCTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CLHSYTPWAYIT*RRIRVLHTSLV Trigger: AACCAAGGAGGTGTGTAGAACTCTGATTCTTCTCAATGTTATGTAGGCCCATGGTGTGTATGAGTGCAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR GCA 90 bp | TATTTGTTACATGGAATAAAGAACATTGTGTACTCCTCAGTGAACTTGCCTGGGGAGCAAAGTGGCGGCTaGAGTGAGGACACTGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: YLLHGIKNIVYSSVNLPGEQSGG*SEDTEH Trigger: ATGTTCAGTGTCCTCACTGCAGCCGCCACTTTGCTC...CCCAGGCAAGTTCACTGAGGAGTACACAATGTTCTTTATTCCATGTAACAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR CCA 90 bp | TATTTGTTACATGGAATAAAGAACATTGTGTACTCCTCAGTGAACTTGCCTGGGCTATGTGACTTCCGGTaGACCATGGGTTTCAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YLLHGIKNIVYSSVNLPGLCDFR*TMGFSG Trigger: CCCACTGAAACCCATGGTCCACCGGAAGTCACATAG...CCCAGGCAAGTTCACTGAGGAGTACACAATGTTCTTTATTCCATGTAACAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR CCA 90 bp | AGAAGAATCAGAGTTCTACACACCTCCTTGGTTCTCATGGGGAGACTTTTCCAATTCTGTTTTATTATGTaGGAACATAACGCCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRIRVLHTSLVLMGRLFQFCFIM*EHNAHR Trigger: CCTGTGGGCGTTATGTTCCCACATAATAAAACAGAA...TTGGAAAAGTCTCCCCATGAGAACCAAGGAGGTGTGTAGAACTCTGATTCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| 3UTR CAA 72 bp | GCACACATTTCTAAATGGAAAGAGCACCTCAGGAGTTaGACTGTGAGAATTTCCCAGAGCTTTGGAACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: AHISKWKEHLRS*TVRISQSFGTL Trigger: TAAAGTTCCAAAGCTCTGGGAAATTCTCACAGTCAAACTCCTGAGGTGCTCTTTCCATTTAGAAATGTGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR TCA 90 bp | AGAAGAATCAGAGTTCTACACACCTCCTTGGTTCTCATGGGGAGACTTTTCCAATCAGTCTTTCCCTTTTaGGCTTTTGGAGTTCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: RRIRVLHTSLVLMGRLFQSVFPF*AFGVHN Trigger: ATTATGAACTCCAAAAGCTCAAAAGGGAAAGACTGA...TTGGAAAAGTCTCCCCATGAGAACCAAGGAGGTGTGTAGAACTCTGATTCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR GCA 90 bp | TATTTGTTACATGGAATAAAGAACATTGTGTACTCCTCAGTGAACTTGCCTGGGGGAGAATCTCCTTTCTaGGGATCTCCTTCTGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: YLLHGIKNIVYSSVNLPGGESPF*GSPSVN Trigger: GTTTACAGAAGGAGATCCGCAGAAAGGAGATTCTCC...CCCAGGCAAGTTCACTGAGGAGTACACAATGTTCTTTATTCCATGTAACAAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS-3UTR CCA 90 bp | TATTTGTTACATGGAATAAAGAACATTGTGTACTCCTCAGTGAACTTGCCTGGGAAGGGAATGAAGTCCTaGTCATTTGCTTTGGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: YLLHGIKNIVYSSVNLPGKGMKS*SFALGY Trigger: GTATCCCAAAGCAAATGACCAGGACTTCATTCCCTT...CCCAGGCAAGTTCACTGAGGAGTACACAATGTTCTTTATTCCATGTAACAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS TCA 90 bp | GACCCTTTCCTTGGCCCTGGGCATTGTTCCCTGAGCCTTGCTGCCTaGTTCCTGCACTGTGGGGACAGGAGTGCCTCCGGGCTTTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: DPFLGPGHCSLSLAA*FLHCGDRSASGLLC Trigger: GCACAAAAGCCCGGAGGCACTCCTGTCCCCACAGTGCAGGAATCAGGCAGCAAGGCTCAGGGAACAATGCCCAGGGCCAAGGAAAGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
||
| CDS TCA 90 bp | TGTGGAGGAGCTGGACCCAGAGGAGCCTGGTGTCCCGGACCGACTTaGCTCCTGCAGTGTACTGCCCAGCTCCTCTGCCGGTTGAAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CGGAGPRGAWCPGPT*LLQCTAQLLCRLKE Trigger: TTCTTTCAACCGGCAGAGGAGCTGGGCAGTACACTGCAGGAGTCAAGTCGGTCCGGGACACCAGGCTCCTCTGGGTCCAGCTCCTCCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
||
| CDS CCA 90 bp | TCCCCTGCAGCTTCGAGCCTTTGGATCTGGGTCCACTCGGTCCTATaGAGCTCCGCCACGACCTTCTCTGCCTGCACAGAGGCAAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SPAASSLWIWVHSVL*SSATTFSACTEARR Trigger: TCTTCTTGCCTCTGTGCAGGCAGAGAAGGTCGTGGCGGAGCTCCATAGGACCGAGTGGACCCAGATCCAAAGGCTCGAAGCTGCAGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
||
| CDS CCA 90 bp | TCCAGGTGCTCTTCCGAGGGGGAGGCGGAGTTTCAGCCTTGGCTGTaGCTGGTCCCCTCCAGTTCAAGTACTGCTCTAGTTCTGTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRCSSEGEAEFQPWL*LVPSSSSTALVLCP Trigger: AGGGCACAGAACTAGAGCAGTACTTGAACTGGAGGGGACCAGCCACAGCCAAGGCTGAAACTCCGCCTCCCCCTCGGAAGAGCACCTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
||
| CDS GCA 90 bp | AACAGACCCTTTCCTTGGCCCTGGGCATTGTTCCCTGAGCCTTGCTaGCTGATTCCTGCACTGTGGGGACAGGAGTGCCTCCGGGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: NRPFPWPWALFPEPC*LIPALWGQECLRAF Trigger: AAAAGCCCGGAGGCACTCCTGTCCCCACAGTGCAGGAATCAGGCAGCAAGGCTCAGGGAACAATGCCCAGGGCCAAGGAAAGGGTCTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS GCA 90 bp | GGAGTTTCAGCCTTGGCTGTGGCTGGTCCCCTCCAGTTCAAGTACTaGTCTAGTTCTGTGCCCTTCGCCCGGGCCCTGGAAGAGTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: GVSALAVAGPLQFKY*SSSVPFARALEESN Trigger: GTTTGACTCTTCCAGGGCCCGGGCGAAGGGCACAGAACTAGAGCAGTACTTGAACTGGAGGGGACCAGCCACAGCCAAGGCTGAAACTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| CDS GCA 90 bp | GAGGGATTGCCACCTCTGGCGATTACCTGCTGGACCTGTCGCGCATaGCGGAGGGTACGGATAAAAGACTCGTGCTTCTGTCTCCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EGLPPLAITCWTCRA*RRVRIKDSCFCLQV Trigger: CACCTGGAGACAGAAGCACGAGTCTTTTATCCGTACCCTCCGGCATGCGCGACAGGTCCAGCAGGTAATCGCCAGAGGTGGCAATCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| CDS CCA 90 bp | CCCTGGGCATTGTTCCCTGAGCCTTGCTGCCTGATTCCTGCACTGTaGGGACAGGAGTGCCTCCGGGCTTTTGTGCAGACGTTCCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PWALFPEPCCLIPAL*GQECLRAFVQTFLL Trigger: CAAAAGGAACGTCTGCACAAAAGCCCGGAGGCACTCCTGTCCCCACAGTGCAGGAATCAGGCAGCAAGGCTCAGGGAACAATGCCCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CCA 90 bp | GTGGAGTGTCTCTGCAGCCTGAGGGAAAGAAACGATCGTCCACAGTaGCTGCACTTGGCCAGCTCTGGCTCTTCTGTGGAGGAGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VECLCSLRERNDRPQ*LHLASSGSSVEELD Trigger: GTCCAGCTCCTCCACAGAAGAGCCAGAGCTGGCCAAGTGCAGCCACTGTGGACGATCGTTTCTTTCCCTCAGGCTGCAGAGACACTCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CCA 90 bp | TCTGTCTCCAGGTGCTCTTCCGAGGGGGAGGCGGAGTTTCAGCCTTaGCTGTGGCTGGTCCCCTCCAGTTCAAGTACTGCTCTAGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SVSRCSSEGEAEFQP*LWLVPSSSSTALVL Trigger: CAGAACTAGAGCAGTACTTGAACTGGAGGGGACCAGCCACAGCCAAGGCTGAAACTCCGCCTCCCCCTCGGAAGAGCACCTGGAGACAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| CDS TCA 90 bp | GTAGCCATTCTGGTCCCCGTCTGCGCCCGCATCACTTGTACTATGTaGCTTCCGGTGGACCATGGGTTTCAGTGGGTAAGCCCGATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VAILVPVCARITCTM*LPVDHGFQWVSPIH Trigger: GTGGATCGGGCTTACCCACTGAAACCCATGGTCCACCGGAAGTCACATAGTACAAGTGATGCGGGCGCAGACGGGGACCAGAATGGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS GCA 90 bp | AGGATGGAAGGCAAGTCTGAGGGATTGCCACCTCTGGCGATTACCTaGTGGACCTGTCGCGCATGCCGGAGGGTACGGATAAAAGACTCG | + |
|
Preference number: 5 (lower is better) Translates to: RMEGKSEGLPPLAIT*WTCRACRRVRIKDS Trigger: CGAGTCTTTTATCCGTACCCTCCGGCATGCGCGACAGGTCCAGCAGGTAATCGCCAGAGGTGGCAATCCCTCAGACTTGCCTTCCATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| CDS CCA 90 bp | ATCTCCTTCTGTAAACTCTCCCCTGCAGCTTCGAGCCTTTGGATCTaGGTCCACTCGGTCCTATGGAGCTCCGCCACGACCTTCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ISFCKLSPAASSLWI*VHSVLWSSATTFSA Trigger: GGCAGAGAAGGTCGTGGCGGAGCTCCATAGGACCGAGTGGACCCAGATCCAAAGGCTCGAAGCTGCAGGGGAGAGTTTACAGAAGGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CCA 90 bp | CTGTGCCCTTCGCCCGGGCCCTGGAAGAGTCAAACACTTTTCTTTTaGACCCTTGCATCTTGCCACAGACGGTGGAGTGTCTCTGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LCPSPGPWKSQTLFF*TLASCHRRWSVSAA Trigger: GGCTGCAGAGACACTCCACCGTCTGTGGCAAGATGCAAGGGTCCAAAAGAAAAGTGTTTGACTCTTCCAGGGCCCGGGCGAAGGGCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS GCA 90 bp | GCTTTTATTACCTTGGCTGTGGCTGGTCCCCTCCAGTTCAAGTACTaGTCTAGTTCTGTGCCCTTCGCCCGGGCCCTGGAAGAGTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: AFITLAVAGPLQFKY*SSSVPFARALEESN Trigger: GTTTGACTCTTCCAGGGCCCGGGCGAAGGGCACAGAACTAGAGCAGTACTTGAACTGGAGGGGACCAGCCACAGCCAAGGTAATAAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239335.2 |
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| CDS-3UTR CAA 90 bp | CACCTCCTTGGTTCTCATGGGGAGACTTTTCCAAGTGATCATGCCAGTTTGTCTCCTTGGCCCTGGGCATaGTTCCCTGAGCCTTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HLLGSHGETFPSDHASLSPWPWA*FPEPCC Trigger: GCAGCAAGGCTCAGGGAACAATGCCCAGGGCCAAGG...AGACAAACTGGCATGATCACTTGGAAAAGTCTCCCCATGAGAACCAAGGAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| CDS GCA 90 bp | TTTCTTTTGGACCCTTGCATCTTGCCACAGACGGTGGAGTGTCTCTaGAGCCTGAGGGAAAGAAACGATCGTCCACAGTGGCTGCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: FLLDPCILPQTVECL*SLRERNDRPQWLHL Trigger: CAAGTGCAGCCACTGTGGACGATCGTTTCTTTCCCTCAGGCTGCAGAGACACTCCACCGTCTGTGGCAAGATGCAAGGGTCCAAAAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CCA 90 bp | ACCTCGTCCTCCTGCTCCATTTCTGTGTTGCTCCAAAGCTTCGACTaGAAACTATTCCTCAAATGTCCCATCGAGGGCCGCTGGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TSSSCSISVLLQSFD*KLFLKCPIEGRWEE Trigger: CTCTTCCCAGCGGCCCTCGATGGGACATTTGAGGAATAGTTTCCAGTCGAAGCTTTGGAGCAACACAGAAATGGAGCAGGAGGACGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CCA 90 bp | TCAGACCTGAACTCTGGGGACAAGCAGGGTTTGTGTGGGGTGTCATaGTCACCATCTCGAACCCTCCTTCTAGGTAGTACCATCCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SDLNSGDKQGLCGVS*SPSRTLLLGSTILC Trigger: ACAAAGGATGGTACTACCTAGAAGGAGGGTTCGAGATGGTGACCATGACACCCCACACAAACCCTGCTTGTCCCCAGAGTTCAGGTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CCA 90 bp | TTGATCCTCTCCCCTGTTTCTACTGAATACCTCAGACCTGAACTCTaGGGACAAGCAGGGTTTGTGTGGGGTGTCATGGTCACCATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LILSPVSTEYLRPEL*GQAGFVWGVMVTIS Trigger: CGAGATGGTGACCATGACACCCCACACAAACCCTGCTTGTCCCCAGAGTTCAGGTCTGAGGTATTCAGTAGAAACAGGGGAGAGGATCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CCA 90 bp | TCCAGTTCAAGTACTGCTCTAGTTCTGTGCCCTTCGCCCGGGCCCTaGAAGAGTCAAACACTTTTCTTTTGGACCCTTGCATCTTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SSSSTALVLCPSPGP*KSQTLFFWTLASCH Trigger: GTGGCAAGATGCAAGGGTCCAAAAGAAAAGTGTTTGACTCTTCCAGGGCCCGGGCGAAGGGCACAGAACTAGAGCAGTACTTGAACTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS-3UTR CAA 90 bp | GCAGGAGGCAGGGTCAGGACTCTGAGATGCCCTGCAAAGCCAGAAGTCATTTATCTGGGAAGAGTCACTTaGTTCGTAAGGGTCGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: AGGRVRTLRCPAKPEVIYLGRVT*FVRVVL Trigger: AAGCACGACCCTTACGAACAAAGTGACTCTTCCCAG...ATAAATGACTTCTGGCTTTGCAGGGCATCTCAGAGTCCTGACCCTGCCTCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| CDS-3UTR CAA 90 bp | GCAGGAGGCAGGGTCAGGACTCTGAGATGCCCTGCAAAGCCAGAAGTCATTTATTGCTCCATTTCTGTGTaGCTCCAAAGCTTCGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGGRVRTLRCPAKPEVIYCSISV*LQSFDW Trigger: CCAGTCGAAGCTTTGGAGCAACACAGAAATGGAGCA...ATAAATGACTTCTGGCTTTGCAGGGCATCTCAGAGTCCTGACCCTGCCTCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| CDS TCA 90 bp | GGGCCGCTGGGAAGAGTCACTTTGTTCGTAAGGGTCGTGCTTAGCTaGGTGGAGTCCAGGAGCTTCTGTTTTATTATGTGGGAACATAAC | + |
|
Preference number: 5 (lower is better) Translates to: GPLGRVTLFVRVVLS*VESRSFCFIMWEHN Trigger: GTTATGTTCCCACATAATAAAACAGAAGCTCCTGGACTCCACTCAGCTAAGCACGACCCTTACGAACAAAGTGACTCTTCCCAGCGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS GCA 90 bp | CCTCCTCTGTCTTCTTCAGCTTTTCTTGTAGGAGAATCTCCTTTCTaGGGATCTCCTTCTGTAAACTCTCCCCTGCAGCTTCGAGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PPLSSSAFLVGESPF*GSPSVNSPLQLRAF Trigger: AAAGGCTCGAAGCTGCAGGGGAGAGTTTACAGAAGGAGATCCGCAGAAAGGAGATTCTCCTACAAGAAAAGCTGAAGAAGACAGAGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS-3UTR CAA 90 bp | CTGTCTGCCATCATTCCCTCTAGAAGGAGCAGAGCAGCAGATTTTGAACTCCTTTGTCTGAAAACTCACTaGAGTCAGGGAGTCTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSAIIPSRRSRAADFELLCLKTH*SQGVLG Trigger: ACCCAAGACTCCCTGACTCAAGTGAGTTTTCAGACA...AAGGAGTTCAAAATCTGCTGCTCTGCTCCTTCTAGAGGGAATGATGGCAGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| CDS-3UTR CAA 90 bp | AGAAGAATCAGAGTTCTACACACCTCCTTGGTTCTCATGGGGAGACTTTTCCAAGGCGGTGGTCGGTTCTaGATGGTCTTACACTTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RRIRVLHTSLVLMGRLFQGGGRF*MVLHLG Trigger: ACCTAAGTGTAAGACCATCAAGAACCGACCACCGCC...TTGGAAAAGTCTCCCCATGAGAACCAAGGAGGTGTGTAGAACTCTGATTCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| CDS-3UTR CAA 90 bp | GCTTTAATGCAGTCCTCACCTACCAAGTCTTCAGGCAAGAACATAAACACTCAGTTCCCTTTTGAGCTTTaGGAGTTCATAATCAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ALMQSSPTKSSGKNINTQFPFEL*EFIIRE Trigger: CTCTCTGATTATGAACTCCAAAAGCTCAAAAGGGAA...CTGAGTGTTTATGTTCTTGCCTGAAGACTTGGTAGGTGAGGACTGCATTAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| CDS-3UTR CAA 90 bp | TATTTGTTACATGGAATAAAGAACATTGTGTACTCCTCAGTGAACTTGCCTGGGCTTAAACCAAAGCTGTaGTCTGAAAACTCACTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: YLLHGIKNIVYSSVNLPGLKPKL*SENSLE Trigger: CTCAAGTGAGTTTTCAGACAACAGCTTTGGTTTAAG...CCCAGGCAAGTTCACTGAGGAGTACACAATGTTCTTTATTCCATGTAACAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| CDS TCA 72 bp | GCTGGACCCAGAGGAGCCTGGTGTCCCGGACCGACTTaGCTCCTGCAGTGTACTGCCCAGCTCCTCTGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: AGPRGAWCPGPT*LLQCTAQLLCR Trigger: CCGGCAGAGGAGCTGGGCAGTACACTGCAGGAGTCAAGTCGGTCCGGGACACCAGGCTCCTCTGGGTCCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CAA 72 bp | AGCTGGACCCAGAGGAGCCTGGTGTCCCGGACCGACTaGACTCCTGCAGTGTACTGCCCAGCTCCTCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SWTQRSLVSRTD*TPAVYCPAPLP Trigger: CGGCAGAGGAGCTGGGCAGTACACTGCAGGAGTCAAGTCGGTCCGGGACACCAGGCTCCTCTGGGTCCAGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS TCA 72 bp | CTTGGCCCTGGGCATTGTTCCCTGAGCCTTGCTGCCTaGTTCCTGCACTGTGGGGACAGGAGTGCCTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: LGPGHCSLSLAA*FLHCGDRSASG Trigger: CCCGGAGGCACTCCTGTCCCCACAGTGCAGGAATCAGGCAGCAAGGCTCAGGGAACAATGCCCAGGGCCAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CAA 90 bp | CTGTGGAGGAGCTGGACCCAGAGGAGCCTGGTGTCCCGGACCGACTaGACTCCTGCAGTGTACTGCCCAGCTCCTCTGCCGGTTGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: LWRSWTQRSLVSRTD*TPAVYCPAPLPVER Trigger: TCTTTCAACCGGCAGAGGAGCTGGGCAGTACACTGCAGGAGTCAAGTCGGTCCGGGACACCAGGCTCCTCTGGGTCCAGCTCCTCCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS GCA 72 bp | GCCTTGGCTGTGGCTGGTCCCCTCCAGTTCAAGTACTaGTCTAGTTCTGTGCCCTTCGCCCGGGCCCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: ALAVAGPLQFKY*SSSVPFARALE Trigger: TTCCAGGGCCCGGGCGAAGGGCACAGAACTAGAGCAGTACTTGAACTGGAGGGGACCAGCCACAGCCAAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| CDS GCA 72 bp | TGTCGCGCATGCCGGAGGGTACGGATAAAAGACTCGTaGTTCTGTCTCCAGGTGCTCTTCCGAGGGGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: CRACRRVRIKDS*FCLQVLFRGGG Trigger: GCCTCCCCCTCGGAAGAGCACCTGGAGACAGAAGCACGAGTCTTTTATCCGTACCCTCCGGCATGCGCGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| CDS GCA 72 bp | ACCTTGGCTGTGGCTGGTCCCCTCCAGTTCAAGTACTaGTCTAGTTCTGTGCCCTTCGCCCGGGCCCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: TLAVAGPLQFKY*SSSVPFARALE Trigger: TTCCAGGGCCCGGGCGAAGGGCACAGAACTAGAGCAGTACTTGAACTGGAGGGGACCAGCCACAGCCAAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239335.2 |
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| CDS CCA 72 bp | AGGTGCTCTTCCGAGGGGGAGGCGGAGTTTCAGCCTTaGCTGTGGCTGGTCCCCTCCAGTTCAAGTACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RCSSEGEAEFQP*LWLVPSSSSTA Trigger: AGCAGTACTTGAACTGGAGGGGACCAGCCACAGCCAAGGCTGAAACTCCGCCTCCCCCTCGGAAGAGCACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| CDS CCA 72 bp | AGGAGTGCCTCCGGGCTTTTGTGCAGACGTTCCTTTTaGGGCGGGTGGAGACCTCGTCCTCCTGCTCCATTT | + |
|
Preference number: 6 (lower is better) Translates to: RSASGLLCRRSF*GGWRPRPPAPF Trigger: AAATGGAGCAGGAGGACGAGGTCTCCACCCGCCCCAAAAGGAACGTCTGCACAAAAGCCCGGAGGCACTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CCA 72 bp | TGTAAACTCTCCCCTGCAGCTTCGAGCCTTTGGATCTaGGTCCACTCGGTCCTATGGAGCTCCGCCACGACC | + |
|
Preference number: 6 (lower is better) Translates to: CKLSPAASSLWI*VHSVLWSSATT Trigger: GGTCGTGGCGGAGCTCCATAGGACCGAGTGGACCCAGATCCAAAGGCTCGAAGCTGCAGGGGAGAGTTTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CAA 90 bp | TTCTGTCTCCAGGTGCTCTTCCGAGGGGGAGGCGGAGTTTCAGCCTaGGCTGTGGCTGGTCCCCTCCAGTTCAAGTACTGCTCTAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: FCLQVLFRGGGGVSA*AVAGPLQFKYCSSS Trigger: AGAACTAGAGCAGTACTTGAACTGGAGGGGACCAGCCACAGCCAAGGCTGAAACTCCGCCTCCCCCTCGGAAGAGCACCTGGAGACAGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| CDS TCA 72 bp | CTGGTCCCCGTCTGCGCCCGCATCACTTGTACTATGTaGCTTCCGGTGGACCATGGGTTTCAGTGGGTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: LVPVCARITCTM*LPVDHGFQWVS Trigger: GCTTACCCACTGAAACCCATGGTCCACCGGAAGTCACATAGTACAAGTGATGCGGGCGCAGACGGGGACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS GCA 72 bp | CCACCTCTGGCGATTACCTGCTGGACCTGTCGCGCATaGCGGAGGGTACGGATAAAAGACTCGTGCTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PPLAITCWTCRA*RRVRIKDSCFC Trigger: ACAGAAGCACGAGTCTTTTATCCGTACCCTCCGGCATGCGCGACAGGTCCAGCAGGTAATCGCCAGAGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| CDS CCA 72 bp | TCTTCCGAGGGGGAGGCGGAGTTTCAGCCTTGGCTGTaGCTGGTCCCCTCCAGTTCAAGTACTGCTCTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SSEGEAEFQPWL*LVPSSSSTALV Trigger: AACTAGAGCAGTACTTGAACTGGAGGGGACCAGCCACAGCCAAGGCTGAAACTCCGCCTCCCCCTCGGAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| CDS CAA 72 bp | CAGCTGTCGTGCCTCCTTGGCGGCGGTGGTCGGTTCTaGATGGTCTTACACTTAGGTATGTGGCGTTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: QLSCLLGGGGRF*MVLHLGMWRSA Trigger: GGCTGAACGCCACATACCTAAGTGTAAGACCATCAAGAACCGACCACCGCCGCCAAGGAGGCACGACAGCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| CDS CAA 90 bp | GGAGTCTTGGGTAGCCATTCTGGTCCCCGTCTGCGCCCGCATCACTaGTACTATGTGACTTCCGGTGGACCATGGGTTTCAGTGGGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: GVLGSHSGPRLRPHH*YYVTSGGPWVSVGK Trigger: CTTACCCACTGAAACCCATGGTCCACCGGAAGTCACATAGTACAAGTGATGCGGGCGCAGACGGGGACCAGAATGGCTACCCAAGACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CAA 90 bp | TCTGTGCCCTTCGCCCGGGCCCTGGAAGAGTCAAACACTTTTCTTTaGGACCCTTGCATCTTGCCACAGACGGTGGAGTGTCTCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SVPFARALEESNTFL*DPCILPQTVECLCS Trigger: GCTGCAGAGACACTCCACCGTCTGTGGCAAGATGCAAGGGTCCAAAAGAAAAGTGTTTGACTCTTCCAGGGCCCGGGCGAAGGGCACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
||
| CDS GCA 72 bp | ACGTTCCTTTTGGGGCGGGTGGAGACCTCGTCCTCCTaGTCCATTTCTGTGTTGCTCCAAAGCTTCGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: TFLLGRVETSSS*SISVLLQSFDW Trigger: CCAGTCGAAGCTTTGGAGCAACACAGAAATGGAGCAGGAGGACGAGGTCTCCACCCGCCCCAAAAGGAACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS GCA 72 bp | TCGGTCCTATGGAGCTCCGCCACGACCTTCTCTGCCTaGACAGAGGCAAGAAGAGATGAATTCACCCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SVLWSSATTFSA*TEARRDEFTQL Trigger: GAGCTGGGTGAATTCATCTCTTCTTGCCTCTGTGCAGGCAGAGAAGGTCGTGGCGGAGCTCCATAGGACCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
||
| CDS GCA 72 bp | GACCCTTGCATCTTGCCACAGACGGTGGAGTGTCTCTaGAGCCTGAGGGAAAGAAACGATCGTCCACAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: DPCILPQTVECL*SLRERNDRPQW Trigger: CCACTGTGGACGATCGTTTCTTTCCCTCAGGCTGCAGAGACACTCCACCGTCTGTGGCAAGATGCAAGGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
||
| CDS GCA 72 bp | CTGGTCCCCTCCAGTTCAAGTACTGCTCTAGTTCTGTaGCCTTCGCCCGGGCCCTGGAAGAGTCAAACACTT | + |
|
Preference number: 6 (lower is better) Translates to: LVPSSSSTALVL*PSPGPWKSQTL Trigger: AAGTGTTTGACTCTTCCAGGGCCCGGGCGAAGGGCACAGAACTAGAGCAGTACTTGAACTGGAGGGGACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
||
| CDS GCA 72 bp | TGTGGCGTTCAGCCACCTTGGGAGCAAAGTGGCGGCTaGAGTGAGGACACTGAACATAGTCTGGGTTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CGVQPPWEQSGG*SEDTEHSLGCL Trigger: CAGACAACCCAGACTATGTTCAGTGTCCTCACTGCAGCCGCCACTTTGCTCCCAAGGTGGCTGAACGCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| CDS CAA 72 bp | GGTAGCCATTCTGGTCCCCGTCTGCGCCCGCATCACTaGTACTATGTGACTTCCGGTGGACCATGGGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: GSHSGPRLRPHH*YYVTSGGPWVS Trigger: TGAAACCCATGGTCCACCGGAAGTCACATAGTACAAGTGATGCGGGCGCAGACGGGGACCAGAATGGCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CCA 72 bp | CCGCATCACTTGTACTATGTGACTTCCGGTGGACCATaGGTTTCAGTGGGTAAGCCCGATCCACTCCCACTC | + |
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Preference number: 6 (lower is better) Translates to: PHHLYYVTSGGP*VSVGKPDPLPL Trigger: GAGTGGGAGTGGATCGGGCTTACCCACTGAAACCCATGGTCCACCGGAAGTCACATAGTACAAGTGATGCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CCA 72 bp | CTCAGACCTGAACTCTGGGGACAAGCAGGGTTTGTGTaGGGTGTCATGGTCACCATCTCGAACCCTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LRPELWGQAGFV*GVMVTISNPPS Trigger: AGAAGGAGGGTTCGAGATGGTGACCATGACACCCCACACAAACCCTGCTTGTCCCCAGAGTTCAGGTCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CCA 72 bp | GGTGGTCGGTTCTTGATGGTCTTACACTTAGGTATGTaGCGTTCAGCCACCTTGGGAGCAAAGTGGCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GGRFLMVLHLGM*RSATLGAKWRL Trigger: CAGCCGCCACTTTGCTCCCAAGGTGGCTGAACGCCACATACCTAAGTGTAAGACCATCAAGAACCGACCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059341.5 |
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| CDS CCA 72 bp | AACTCTGGGGACAAGCAGGGTTTGTGTGGGGTGTCATaGTCACCATCTCGAACCCTCCTTCTAGGTAGTACC | + |
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Preference number: 6 (lower is better) Translates to: NSGDKQGLCGVS*SPSRTLLLGST Trigger: GGTACTACCTAGAAGGAGGGTTCGAGATGGTGACCATGACACCCCACACAAACCCTGCTTGTCCCCAGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CAA 72 bp | TTCGCCCGGGCCCTGGAAGAGTCAAACACTTTTCTTTaGGACCCTTGCATCTTGCCACAGACGGTGGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: FARALEESNTFL*DPCILPQTVEC Trigger: ACACTCCACCGTCTGTGGCAAGATGCAAGGGTCCAAAAGAAAAGTGTTTGACTCTTCCAGGGCCCGGGCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS GCA 72 bp | GCCCTGGAAGAGTCAAACACTTTTCTTTTGGACCCTTaGATCTTGCCACAGACGGTGGAGTGTCTCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ALEESNTFLLDP*ILPQTVECLCS Trigger: GCTGCAGAGACACTCCACCGTCTGTGGCAAGATGCAAGGGTCCAAAAGAAAAGTGTTTGACTCTTCCAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CCA 72 bp | TCCCCTGTTTCTACTGAATACCTCAGACCTGAACTCTaGGGACAAGCAGGGTTTGTGTGGGGTGTCATGGTC | + |
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Preference number: 6 (lower is better) Translates to: SPVSTEYLRPEL*GQAGFVWGVMV Trigger: GACCATGACACCCCACACAAACCCTGCTTGTCCCCAGAGTTCAGGTCTGAGGTATTCAGTAGAAACAGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CCA 72 bp | AGTACTGCTCTAGTTCTGTGCCCTTCGCCCGGGCCCTaGAAGAGTCAAACACTTTTCTTTTGGACCCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: STALVLCPSPGP*KSQTLFFWTLA Trigger: TGCAAGGGTCCAAAAGAAAAGTGTTTGACTCTTCCAGGGCCCGGGCGAAGGGCACAGAACTAGAGCAGTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CAA 72 bp | GGCCCTGGAAGAGTCAAACACTTTTCTTTTGGACCCTaGCATCTTGCCACAGACGGTGGAGTGTCTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: GPGRVKHFSFGP*HLATDGGVSLQ Trigger: CTGCAGAGACACTCCACCGTCTGTGGCAAGATGCAAGGGTCCAAAAGAAAAGTGTTTGACTCTTCCAGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CAA 90 bp | AATTCACCCAGCTCCTTAAACCAAAGCTGTTGTCTGAAAACTCACTaGAGTCAGGGAGTCTTGGGTAGCCATTCTGGTCCCCGTCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: NSPSSLNQSCCLKTH*SQGVLGSHSGPRLR Trigger: GCGCAGACGGGGACCAGAATGGCTACCCAAGACTCCCTGACTCAAGTGAGTTTTCAGACAACAGCTTTGGTTTAAGGAGCTGGGTGAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CCA 72 bp | ACTCCCACTCGTTTCCTCCTAAAGGGAATGAAGTCCTaGTCATTTGCTTTGGGATACCGGGGTGTCGGACTA | + |
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Preference number: 6 (lower is better) Translates to: TPTRFLLKGMKS*SFALGYRGVGL Trigger: TAGTCCGACACCCCGGTATCCCAAAGCAAATGACCAGGACTTCATTCCCTTTAGGAGGAAACGAGTGGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CAA 72 bp | CGGGTGGAGACCTCGTCCTCCTGCTCCATTTCTGTGTaGCTCCAAAGCTTCGACTGGAAACTATTCCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: RVETSSSCSISV*LQSFDWKLFLK Trigger: TTTGAGGAATAGTTTCCAGTCGAAGCTTTGGAGCAACACAGAAATGGAGCAGGAGGACGAGGTCTCCACCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CAA 90 bp | AGAGAGCTGGCGTGGACTAGGGTTTTCCTGAGCCTGATCACAAGTTaGATCCTCTCCCCTGTTTCTACTGAATACCTCAGACCTGAACTC | + |
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Preference number: 6 (lower is better) Translates to: RELAWTRVFLSLITS*ILSPVSTEYLRPEL Trigger: GAGTTCAGGTCTGAGGTATTCAGTAGAAACAGGGGAGAGGATCAAACTTGTGATCAGGCTCAGGAAAACCCTAGTCCACGCCAGCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS GCA 72 bp | GGGTGGAGACCTCGTCCTCCTGCTCCATTTCTGTGTTaGTCCAAAGCTTCGACTGGAAACTATTCCTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: GWRPRPPAPFLC*SKASTGNYSSN Trigger: ATTTGAGGAATAGTTTCCAGTCGAAGCTTTGGAGCAACACAGAAATGGAGCAGGAGGACGAGGTCTCCACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CAA 72 bp | AGCTCCTTAAACCAAAGCTGTTGTCTGAAAACTCACTaGAGTCAGGGAGTCTTGGGTAGCCATTCTGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: SSLNQSCCLKTH*SQGVLGSHSGP Trigger: GGGACCAGAATGGCTACCCAAGACTCCCTGACTCAAGTGAGTTTTCAGACAACAGCTTTGGTTTAAGGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS TCA 72 bp | GGAAGAGTCACTTTGTTCGTAAGGGTCGTGCTTAGCTaGGTGGAGTCCAGGAGCTTCTGTTTTATTATGTGG | + |
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Preference number: 6 (lower is better) Translates to: GRVTLFVRVVLS*VESRSFCFIMW Trigger: CCACATAATAAAACAGAAGCTCCTGGACTCCACTCAGCTAAGCACGACCCTTACGAACAAAGTGACTCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CCA 72 bp | TTTGAGCTTTTGGAGTTCATAATCAGAGAGCTGGCGTaGACTAGGGTTTTCCTGAGCCTGATCACAAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: FELLEFIIRELA*TRVFLSLITSL Trigger: CAAACTTGTGATCAGGCTCAGGAAAACCCTAGTCCACGCCAGCTCTCTGATTATGAACTCCAAAAGCTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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| CDS CAA 72 bp | AGAGATGAATTCACCCAGCTCCTTAAACCAAAGCTGTaGTCTGAAAACTCACTTGAGTCAGGGAGTCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: RDEFTQLLKPKL*SENSLESGSLG Trigger: CCCAAGACTCCCTGACTCAAGTGAGTTTTCAGACAACAGCTTTGGTTTAAGGAGCTGGGTGAATTCATCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059341.5 ENSMUST00000239335.2 |
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