Pregenerated sensors for ZC2HC1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043542Ensembl transcript IDs: ENSMUST00000051064.9, ENSMUST00000193010.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGGCTGTGGGACATACTCTGCCAAAGCAGCTGACCAGTAAGTGCTaGTACACTGAAGGTGTGAGTGATCAAGTCTCATGTCAGTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: RAVGHTLPKQLTSKC*YTEGVSDQVSCQSV Trigger: CACTGACTGACATGAGACTTGATCACTCACACCTTCAGTGTATCAGCACTTACTGGTCAGCTGCTTTGGCAGAGTATGTCCCACAGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| 3UTR TCA 90 bp | AACACACTCTATTGGTACCTGTGTAAGTTAAAGTTCAGGGTCGACTaGACAGTGATTACTCAGGGCTGTGGGACATACTCTGCCAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: NTLYWYLCKLKFRVD*TVITQGCGTYSAKA Trigger: TGCTTTGGCAGAGTATGTCCCACAGCCCTGAGTAATCACTGTTCAGTCGACCCTGAACTTTAACTTACACAGGTACCAATAGAGTGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| 3UTR TCA 90 bp | TCCAGTATCTCATTCTCCTATGATACTATTGGTCATAGGCACCAATaGCAGCACCTCTTTAGCAATGTGATTATTCTAAAGCCTACAAGG | + |
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Preference number: 1 (lower is better) Translates to: SSISFSYDTIGHRHQ*QHLFSNVIILKPTR Trigger: CCTTGTAGGCTTTAGAATAATCACATTGCTAAAGAGGTGCTGTCATTGGTGCCTATGACCAATAGTATCATAGGAGAATGAGATACTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| 3UTR GCA 90 bp | ATAAATAAAAATGAATGGTGCACAAGAAGTCTGCTTAAAAACTATTaGCCAGCACAGCAGCATGAGAGTAAAGTATGGACCACAGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: INKNEWCTRSLLKNY*PAQQHESKVWTTEA Trigger: TGCCTCTGTGGTCCATACTTTACTCTCATGCTGCTGTGCTGGGCAATAGTTTTTAAGCAGACTTCTTGTGCACCATTCATTTTTATTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| 3UTR GCA 90 bp | CTACAACACTCGAAACTAATTGTGCAAATAAATAAAAATGAATGGTaGACAAGAAGTCTGCTTAAAAACTATTGCCCAGCACAGCAGCAT | + |
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Preference number: 1 (lower is better) Translates to: LQHSKLIVQINKNEW*TRSLLKNYCPAQQH Trigger: ATGCTGCTGTGCTGGGCAATAGTTTTTAAGCAGACTTCTTGTGCACCATTCATTTTTATTTATTTGCACAATTAGTTTCGAGTGTTGTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| 3UTR TCA 90 bp | CTAGGCAATGAGTTTCTATATTCATCCTTAATCATAAACAACAAATaGGAAAGAAACACGGCAACACACTCTATTGGTACCTGTGTAAGT | + |
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Preference number: 1 (lower is better) Translates to: LGNEFLYSSLIINNK*ERNTATHSIGTCVS Trigger: ACTTACACAGGTACCAATAGAGTGTGTTGCCGTGTTTCTTTCTCATTTGTTGTTTATGATTAAGGATGAATATAGAAACTCATTGCCTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| 3UTR-3UTR CCA 90 bp | AATGAATGGTGCACAAGAAGTCTGCTTAAAAACTATTGCCCAGCACAGCAGCATGATTACTCAGGGCTGTaGGACATACTCTGCCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: NEWCTRSLLKNYCPAQQHDYSGL*DILCQS Trigger: GCTTTGGCAGAGTATGTCCCACAGCCCTGAGTAATC...ATGCTGCTGTGCTGGGCAATAGTTTTTAAGCAGACTTCTTGTGCACCATTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| 3UTR-3UTR TCA 90 bp | ATGCAACAAGAAAGGAAGCATAAGGTGAGCAAAAGGACTCATTACCACAGGTTTCTCTGCCAAAGCAGCTaGCCAGTAAGTGCTGATACA | + |
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Preference number: 2 (lower is better) Translates to: MQQERKHKVSKRTHYHRFLCQSS*PVSADT Trigger: TGTATCAGCACTTACTGGTCAGCTGCTTTGGCAGAG...AAACCTGTGGTAATGAGTCCTTTTGCTCACCTTATGCTTCCTTTCTTGTTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| 3UTR-3UTR TCA 90 bp | ATGCAACAAGAAAGGAAGCATAAGGTGAGCAAAAGGACTCATTACCACAGGTTTATATTCATTAAATCCTaGTCCTGGACCCTTAGCGTT | + |
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Preference number: 2 (lower is better) Translates to: MQQERKHKVSKRTHYHRFIFIKS*SWTLSV Trigger: AACGCTAAGGGTCCAGGATCAGGATTTAATGAATAT...AAACCTGTGGTAATGAGTCCTTTTGCTCACCTTATGCTTCCTTTCTTGTTGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| 3UTR-3UTR TCA 90 bp | TCTCATTCTCCTATGATACTATTGGTCATAGGCACCAATGACAGCACCTCTTTAATATTCATTAAATCCTaGTCCTGGACCCTTAGCGTT | + |
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Preference number: 2 (lower is better) Translates to: SHSPMILLVIGTNDSTSLIFIKS*SWTLSV Trigger: AACGCTAAGGGTCCAGGATCAGGATTTAATGAATAT...TAAAGAGGTGCTGTCATTGGTGCCTATGACCAATAGTATCATAGGAGAATGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCAACAAGAAAGGAAGCATAAGGTGAGCAAAAGGACTCATTACCACAGGTTTGCAATTGATAATCCATaGAGTTACAGGCAAAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: MQQERKHKVSKRTHYHRFAIDNP*SYRQSG Trigger: TCCACTTTGCCTGTAACTCCATGGATTATCAATTGC...AAACCTGTGGTAATGAGTCCTTTTGCTCACCTTATGCTTCCTTTCTTGTTGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| 3UTR-3UTR GCA 90 bp | AATGAATGGTGCACAAGAAGTCTGCTTAAAAACTATTGCCCAGCACAGCAGCATGTGAAAAGGAAAATATaGACCTTAGCTGGACTTATA | + |
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Preference number: 2 (lower is better) Translates to: NEWCTRSLLKNYCPAQQHVKRKI*TLAGLI Trigger: TATAAGTCCAGCTAAGGTGCATATTTTCCTTTTCAC...ATGCTGCTGTGCTGGGCAATAGTTTTTAAGCAGACTTCTTGTGCACCATTCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| 3UTR TCA 72 bp | GGACATACTCTGCCAAAGCAGCTGACCAGTAAGTGCTaGTACACTGAAGGTGTGAGTGATCAAGTCTCATGT | + |
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Preference number: 3 (lower is better) Translates to: GHTLPKQLTSKC*YTEGVSDQVSC Trigger: ACATGAGACTTGATCACTCACACCTTCAGTGTATCAGCACTTACTGGTCAGCTGCTTTGGCAGAGTATGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| 3UTR TCA 72 bp | TATTGGTACCTGTGTAAGTTAAAGTTCAGGGTCGACTaGACAGTGATTACTCAGGGCTGTGGGACATACTCT | + |
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Preference number: 3 (lower is better) Translates to: YWYLCKLKFRVD*TVITQGCGTYS Trigger: AGAGTATGTCCCACAGCCCTGAGTAATCACTGTTCAGTCGACCCTGAACTTTAACTTACACAGGTACCAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| 3UTR GCA 72 bp | AATGAATGGTGCACAAGAAGTCTGCTTAAAAACTATTaGCCAGCACAGCAGCATGAGAGTAAAGTATGGACC | + |
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Preference number: 3 (lower is better) Translates to: NEWCTRSLLKNY*PAQQHESKVWT Trigger: GGTCCATACTTTACTCTCATGCTGCTGTGCTGGGCAATAGTTTTTAAGCAGACTTCTTGTGCACCATTCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| 3UTR TCA 72 bp | AGGCATGGTAAACATTATTGTAACATCTTTCATGGATaGTTGGCTTGTCTCTTGGCAGCATGCTGTAACACT | + |
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Preference number: 3 (lower is better) Translates to: RHGKHYCNIFHG*LACLLAACCNT Trigger: AGTGTTACAGCATGCTGCCAAGAGACAAGCCAATCATCCATGAAAGATGTTACAATAATGTTTACCATGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| 3UTR TCA 72 bp | AGAGACAACCGCAGTCACAATGGTCATATTTTCCCATaGGTAACTTTCAGAGTGATCTATAACTATCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: RDNRSHNGHIFP*VTFRVIYNYLP Trigger: TGGAAGATAGTTATAGATCACTCTGAAAGTTACTCATGGGAAAATATGACCATTGTGACTGCGGTTGTCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| 3UTR GCA 72 bp | GATCAAGTCTCATGTCAGTCAGTGAAAAGGAAAATATaGACCTTAGCTGGACTTATATTAGCCAGCTATGTA | + |
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Preference number: 3 (lower is better) Translates to: DQVSCQSVKRKI*TLAGLILASYV Trigger: TACATAGCTGGCTAATATAAGTCCAGCTAAGGTGCATATTTTCCTTTTCACTGACTGACATGAGACTTGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| 3UTR TCA 72 bp | TCATTCTCCTATGATACTATTGGTCATAGGCACCAATaGCAGCACCTCTTTAGCAATGTGATTATTCTAAAG | + |
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Preference number: 3 (lower is better) Translates to: SFSYDTIGHRHQ*QHLFSNVIILK Trigger: CTTTAGAATAATCACATTGCTAAAGAGGTGCTGTCATTGGTGCCTATGACCAATAGTATCATAGGAGAATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS-3UTR TCA 90 bp | AGGAATTTAACACTAGTTGCTGAAGAGTTCAGCTGGGAAAATGACCTCACACCCGCTTGCCGCCCTCCTTaGGAGCCTGGTCCAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: RNLTLVAEEFSWENDLTPACRPP*EPGPGL Trigger: AAGGCCTGGACCAGGCTCTCAAGGAGGGCGGCAAGC...GGGTGTGAGGTCATTTTCCCAGCTGAACTCTTCAGCAACTAGTGTTAAATTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| CDS-3UTR CCA 90 bp | CCAGTATCTCATTCTCCTATGATACTATTGGTCATAGGCACCAATGACAGCACCCCATCTGGCCCTGCCTaGGGGGCTGCTATCGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: PVSHSPMILLVIGTNDSTPSGPA*GAAIAL Trigger: TAGAGCGATAGCAGCCCCCCAGGCAGGGCCAGATGG...GGTGCTGTCATTGGTGCCTATGACCAATAGTATCATAGGAGAATGAGATACTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000193010.2 |
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| CDS-3UTR TCA 90 bp | ACAGATTCTCCAGTATCTCATTCTCCTATGATACTATTGGTCATAGGCACCAATGCTTGCCGCCCTCCTTaGGAGCCTGGTCCAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: TDSPVSHSPMILLVIGTNACRPP*EPGPGL Trigger: AAGGCCTGGACCAGGCTCTCAAGGAGGGCGGCAAGC...ATTGGTGCCTATGACCAATAGTATCATAGGAGAATGAGATACTGGAGAATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS-3UTR CCA 90 bp | TCTCATTCTCCTATGATACTATTGGTCATAGGCACCAATGACAGCACCTCTTTAGTGTTAGCTCCTGCCTaGGGGGCTGCTATCGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: SHSPMILLVIGTNDSTSLVLAPA*GAAIAL Trigger: TAGAGCGATAGCAGCCCCCCAGGCAGGAGCTAACAC...TAAAGAGGTGCTGTCATTGGTGCCTATGACCAATAGTATCATAGGAGAATGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| CDS-3UTR CCA 90 bp | AATGAATGGTGCACAAGAAGTCTGCTTAAAAACTATTGCCCAGCACAGCAGCATGGATGGCTTCTTTGGTaGTTCTGGCCTGGGTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: NEWCTRSLLKNYCPAQQHGWLLW*FWPGFE Trigger: CTCAAACCCAGGCCAGAACCACCAAAGAAGCCATCC...ATGCTGCTGTGCTGGGCAATAGTTTTTAAGCAGACTTCTTGTGCACCATTCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| CDS-3UTR CCA 90 bp | AATTTAACACTAGTTGCTGAAGAGTTCAGCTGGGAAAATGACCTCACACCCACTGGATGGCTTCTTTGGTaGTTCTGGCCTGGGTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: NLTLVAEEFSWENDLTPTGWLLW*FWPGFE Trigger: CTCAAACCCAGGCCAGAACCACCAAAGAAGCCATCC...AGTGGGTGTGAGGTCATTTTCCCAGCTGAACTCTTCAGCAACTAGTGTTAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS-3UTR TCA 90 bp | AGGAATTTAACACTAGTTGCTGAAGAGTTCAGCTGGGAAAATGACCTCACACCCCGGCTGCATTTTCATTaGATCTCCTCTGGCAATACG | + |
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Preference number: 4 (lower is better) Translates to: RNLTLVAEEFSWENDLTPRLHFH*ISSGNT Trigger: CGTATTGCCAGAGGAGATTCAATGAAAATGCAGCCG...GGGTGTGAGGTCATTTTCCCAGCTGAACTCTTCAGCAACTAGTGTTAAATTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| CDS-3UTR CCA 90 bp | TCTCATTCTCCTATGATACTATTGGTCATAGGCACCAATGACAGCACCTCTTTACAGCTCTCTGCCGGCTaGAATCAAAAGTCTTCCGCT | + |
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Preference number: 4 (lower is better) Translates to: SHSPMILLVIGTNDSTSLQLSAG*NQKSSA Trigger: AGCGGAAGACTTTTGATTCCAGCCGGCAGAGAGCTG...TAAAGAGGTGCTGTCATTGGTGCCTATGACCAATAGTATCATAGGAGAATGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS-3UTR CCA 90 bp | CCAGTATCTCATTCTCCTATGATACTATTGGTCATAGGCACCAATGACAGCACCTGTATAGTCTCCATCTaGCCTGGCTGCATAGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: PVSHSPMILLVIGTNDSTCIVSI*PGCIVL Trigger: GAGAACTATGCAGCCAGGCCAGATGGAGACTATACA...GGTGCTGTCATTGGTGCCTATGACCAATAGTATCATAGGAGAATGAGATACTGG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| CDS-3UTR TCA 90 bp | AACATGCAACAAGAAAGGAAGCATAAGGTGAGCAAAAGGACTCATTACCACAGGCAAAGGACTGTTAACTaGAGATGCTTTACCCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: NMQQERKHKVSKRTHYHRQRTVN*RCFTRG Trigger: CCCACGGGTAAAGCATCTTCAGTTAACAGTCCTTTG...CCTGTGGTAATGAGTCCTTTTGCTCACCTTATGCTTCCTTTCTTGTTGCATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| CDS-3UTR GCA 90 bp | CCAGTATCTCATTCTCCTATGATACTATTGGTCATAGGCACCAATGACAGCACCTGCCACAGAATTTCTTaGCAAACTAGGAGGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: PVSHSPMILLVIGTNDSTCHRIS*QTRRCG Trigger: ACCACACCTCCTAGTTTGGCAAGAAATTCTGTGGCA...GGTGCTGTCATTGGTGCCTATGACCAATAGTATCATAGGAGAATGAGATACTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| CDS-3UTR CCA 90 bp | TATTCTAAAGCCTACAAGGTTCATCACTACAGTGACAGTGCTTGTGCAAGTATACAGCTCTCTGCCGGCTaGAATCAAAAGTCTTCCGCT | + |
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Preference number: 4 (lower is better) Translates to: YSKAYKVHHYSDSACASIQLSAG*NQKSSA Trigger: AGCGGAAGACTTTTGATTCCAGCCGGCAGAGAGCTG...TATACTTGCACAAGCACTGTCACTGTAGTGATGAACCTTGTAGGCTTTAGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS-3UTR CCA 90 bp | AATGAATGGTGCACAAGAAGTCTGCTTAAAAACTATTGCCCAGCACAGCAGCATATTGGATGGCTTCTTTaGTGGTTCTGGCCTGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: NEWCTRSLLKNYCPAQQHIGWLL*WFWPGF Trigger: AAACCCAGGCCAGAACCACCAAAGAAGCCATCCAAT...ATGCTGCTGTGCTGGGCAATAGTTTTTAAGCAGACTTCTTGTGCACCATTCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| 3UTR CAA 72 bp | TTGGCTTGTCTCTTGGCAGCATGCTGTAACACTTACTaGCTACTGTTGAAGCCAATGACAACAAACATGTGC | + |
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Preference number: 4 (lower is better) Translates to: LACLLAACCNTY*LLLKPMTTNMC Trigger: GCACATGTTTGTTGTCATTGGCTTCAACAGTAGCAAGTAAGTGTTACAGCATGCTGCCAAGAGACAAGCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| CDS-3UTR CCA 90 bp | ATGCAACAAGAAAGGAAGCATAAGGTGAGCAAAAGGACTCATTACCACAGGTTTTCGTCTCCAATTGGATaGCTTCTTTGGTGGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: MQQERKHKVSKRTHYHRFSSPIG*LLWWFW Trigger: CCAGAACCACCAAAGAAGCCATCCAATTGGAGACGA...AAACCTGTGGTAATGAGTCCTTTTGCTCACCTTATGCTTCCTTTCTTGTTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| CDS-3UTR CCA 90 bp | TCTCATTCTCCTATGATACTATTGGTCATAGGCACCAATGACAGCACCTCTTTATCGTCTCCAATTGGATaGCTTCTTTGGTGGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SHSPMILLVIGTNDSTSLSSPIG*LLWWFW Trigger: CCAGAACCACCAAAGAAGCCATCCAATTGGAGACGA...TAAAGAGGTGCTGTCATTGGTGCCTATGACCAATAGTATCATAGGAGAATGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS-3UTR CCA 90 bp | TCTCATTCTCCTATGATACTATTGGTCATAGGCACCAATGACAGCACCTCTTTACTGTGGCCGAGAAGCTaGCTTTCCTTTAGAATCAGT | + |
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Preference number: 4 (lower is better) Translates to: SHSPMILLVIGTNDSTSLLWPRS*LSFRIS Trigger: ACTGATTCTAAAGGAAAGCCAGCTTCTCGGCCACAG...TAAAGAGGTGCTGTCATTGGTGCCTATGACCAATAGTATCATAGGAGAATGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS-3UTR TCA 90 bp | ACAGATTCTCCAGTATCTCATTCTCCTATGATACTATTGGTCATAGGCACCAATCGGCTGCATTTTCATTaGATCTCCTCTGGCAATACG | + |
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Preference number: 4 (lower is better) Translates to: TDSPVSHSPMILLVIGTNRLHFH*ISSGNT Trigger: CGTATTGCCAGAGGAGATTCAATGAAAATGCAGCCG...ATTGGTGCCTATGACCAATAGTATCATAGGAGAATGAGATACTGGAGAATCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS-3UTR GCA 90 bp | TATTCTAAAGCCTACAAGGTTCATCACTACAGTGACAGTGCTTGTGCAAGTATAGTTGGTAAGCACCCCTaGCACAGAATTTCTTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: YSKAYKVHHYSDSACASIVGKHP*HRISCQ Trigger: TTGGCAAGAAATTCTGTGGCAGGGGTGCTTACCAAC...TATACTTGCACAAGCACTGTCACTGTAGTGATGAACCTTGTAGGCTTTAGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| CDS-3UTR GCA 90 bp | AGGAATTTAACACTAGTTGCTGAAGAGTTCAGCTGGGAAAATGACCTCACACCCGAATCATTCTTCGAATaGCACATTCACAGCAGAACT | + |
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Preference number: 4 (lower is better) Translates to: RNLTLVAEEFSWENDLTPESFFE*HIHSRT Trigger: AGTTCTGCTGTGAATGTGGCATTCGAAGAATGATTC...GGGTGTGAGGTCATTTTCCCAGCTGAACTCTTCAGCAACTAGTGTTAAATTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| 3UTR CAA 72 bp | ACAGATTCTCCAGTATCTCATTCTCCTATGATACTATaGGTCATAGGCACCAATGACAGCACCTCTTTAGCA | + |
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Preference number: 4 (lower is better) Translates to: TDSPVSHSPMIL*VIGTNDSTSLA Trigger: TGCTAAAGAGGTGCTGTCATTGGTGCCTATGACCAATAGTATCATAGGAGAATGAGATACTGGAGAATCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| 3UTR CAA 72 bp | CTCTTGGCAGCATGCTGTAACACTTACTTGCTACTGTaGAAGCCAATGACAACAAACATGTGCCTATTTACT | + |
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Preference number: 4 (lower is better) Translates to: LLAACCNTYLLL*KPMTTNMCLFT Trigger: AGTAAATAGGCACATGTTTGTTGTCATTGGCTTCAACAGTAGCAAGTAAGTGTTACAGCATGCTGCCAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| CDS-3UTR GCA 90 bp | AGGAATTTAACACTAGTTGCTGAAGAGTTCAGCTGGGAAAATGACCTCACACCCTATATGTCTGTCGGCTaGATTTTCATTGAATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RNLTLVAEEFSWENDLTPYMSVG*IFIESP Trigger: AGGAGATTCAATGAAAATGCAGCCGACAGACATATA...GGGTGTGAGGTCATTTTCCCAGCTGAACTCTTCAGCAACTAGTGTTAAATTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| CDS-3UTR GCA 90 bp | CCAGTATCTCATTCTCCTATGATACTATTGGTCATAGGCACCAATGACAGCACCTATATGTCTGTCGGCTaGATTTTCATTGAATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PVSHSPMILLVIGTNDSTYMSVG*IFIESP Trigger: AGGAGATTCAATGAAAATGCAGCCGACAGACATATA...GGTGCTGTCATTGGTGCCTATGACCAATAGTATCATAGGAGAATGAGATACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS-3UTR CCA 90 bp | TATTCTAAAGCCTACAAGGTTCATCACTACAGTGACAGTGCTTGTGCAAGTATAGCTTTCGTCTCCAATTaGATGGCTTCTTTGGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: YSKAYKVHHYSDSACASIAFVSN*MASLVV Trigger: AACCACCAAAGAAGCCATCCAATTGGAGACGAAAGC...TATACTTGCACAAGCACTGTCACTGTAGTGATGAACCTTGTAGGCTTTAGAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS-3UTR CCA 90 bp | TATTCTAAAGCCTACAAGGTTCATCACTACAGTGACAGTGCTTGTGCAAGTATATCATTGAATCTCCTCTaGCAATACGGACACTGGATG | + |
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Preference number: 4 (lower is better) Translates to: YSKAYKVHHYSDSACASISLNLL*QYGHWM Trigger: CATCCAGTGTCCGTATTGCCAGAGGAGATTCAATGA...TATACTTGCACAAGCACTGTCACTGTAGTGATGAACCTTGTAGGCTTTAGAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS-3UTR GCA 90 bp | AATTTAACACTAGTTGCTGAAGAGTTCAGCTGGGAAAATGACCTCACACCCACTAACAAGTCTCCAACTTaGACAACACTTCCATTTTCT | + |
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Preference number: 4 (lower is better) Translates to: NLTLVAEEFSWENDLTPTNKSPT*TTLPFS Trigger: AGAAAATGGAAGTGTTGTGCAAGTTGGAGACTTGTT...AGTGGGTGTGAGGTCATTTTCCCAGCTGAACTCTTCAGCAACTAGTGTTAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
||
| CDS-3UTR GCA 90 bp | TTGCTGAAGAGTTCAGCTGGGAAAATGACCTCACACCCACTAACAATGAATAAAGAATCATTCTTCGAATaGCACATTCACAGCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: LLKSSAGKMTSHPLTMNKESFFE*HIHSRT Trigger: AGTTCTGCTGTGAATGTGGCATTCGAAGAATGATTC...TTTATTCATTGTTAGTGGGTGTGAGGTCATTTTCCCAGCTGAACTCTTCAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS-3UTR GCA 90 bp | TTAATACTGCAAAGACTAATAAAGGAAAGCCACTCTTCAGAGGAGCTATGCATGAACAAGTCTCCAACTTaGACAACACTTCCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LILQRLIKESHSSEELCMNKSPT*TTLPFS Trigger: AGAAAATGGAAGTGTTGTGCAAGTTGGAGACTTGTT...CATGCATAGCTCCTCTGAAGAGTGGCTTTCCTTTATTAGTCTTTGCAGTATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
||
| CDS CCA 90 bp | GAGGGCGGAGGAGGAGGAGGCAGCTTGCCGCCCTCCTTGAGAGCCTaGTCCAGGCCTTTCGCTGCTCTGATGGTGGCAATGAACTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: EGGGGGGSLPPSLRA*SRPFAALMVAMNSS Trigger: CGAGGAGTTCATTGCCACCATCAGAGCAGCGAAAGGCCTGGACCAGGCTCTCAAGGAGGGCGGCAAGCTGCCTCCTCCTCCTCCGCCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS GCA 90 bp | TGGTCCAGGCCTTTCGCTGCTCTGATGGTGGCAATGAACTCCTCGTaGTTTCGTCTCCAATTGGATGGCTTCTTTGGTGGTTCTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: WSRPFAALMVAMNSS*FRLQLDGFFGGSGL Trigger: CAGGCCAGAACCACCAAAGAAGCCATCCAATTGGAGACGAAAGCACGAGGAGTTCATTGCCACCATCAGAGCAGCGAAAGGCCTGGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS CCA 90 bp | ATTTTCATTGAATCTCCTCTGGCAATACGGACACTGGATGTAATCTaGGTCGTAAGAGGGCGGAGGAGGAGGAGGCAGCTTGCCGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: IFIESPLAIRTLDVI*VVRGRRRRRQLAAL Trigger: GAGGGCGGCAAGCTGCCTCCTCCTCCTCCGCCCTCTTACGACCCAGATTACATCCAGTGTCCGTATTGCCAGAGGAGATTCAATGAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS-3UTR CAA 90 bp | AATTTAACACTAGTTGCTGAAGAGTTCAGCTGGGAAAATGACCTCACACCCACTGGAGGAGGAGGCAGCTaGCCGCCCTCCTTGAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NLTLVAEEFSWENDLTPTGGGGS*PPSLRA Trigger: GGCTCTCAAGGAGGGCGGCAAGCTGCCTCCTCCTCC...AGTGGGTGTGAGGTCATTTTCCCAGCTGAACTCTTCAGCAACTAGTGTTAAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
||
| CDS-3UTR CAA 90 bp | AACATGCAACAAGAAAGGAAGCATAAGGTGAGCAAAAGGACTCATTACCACAGGAGCTTGCCGCCCTCCTaGAGAGCCTGGTCCAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: NMQQERKHKVSKRTHYHRSLPPS*RAWSRP Trigger: AGGCCTGGACCAGGCTCTCAAGGAGGGCGGCAAGCT...CCTGTGGTAATGAGTCCTTTTGCTCACCTTATGCTTCCTTTCTTGTTGCATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
||
| CDS CCA 90 bp | TCTGATGGTGGCAATGAACTCCTCGTGCTTTCGTCTCCAATTGGATaGCTTCTTTGGTGGTTCTGGCCTGGGTTTGAGAGGTTTGACCGT | + |
|
Preference number: 5 (lower is better) Translates to: SDGGNELLVLSSPIG*LLWWFWPGFERFDR Trigger: ACGGTCAAACCTCTCAAACCCAGGCCAGAACCACCAAAGAAGCCATCCAATTGGAGACGAAAGCACGAGGAGTTCATTGCCACCATCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
||
| CDS-3UTR CAA 90 bp | TCAGTCAGTGAAAAGGAAAATATGCACCTTAGCTGGACTTATATTAGCCAGCTAGGAGGAGGAGGCAGCTaGCCGCCCTCCTTGAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SVSEKENMHLSWTYISQLGGGGS*PPSLRA Trigger: GGCTCTCAAGGAGGGCGGCAAGCTGCCTCCTCCTCC...TAGCTGGCTAATATAAGTCCAGCTAAGGTGCATATTTTCCTTTTCACTGACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
||
| CDS GCA 90 bp | GGTTTGAGAGGTTTGACCGTGGGAATATCAGTCCCTTCAGCTCTCTaGCGGCTGGAATCAAAAGTCTTCCGCTTCTTAGTGGCAGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GLRGLTVGISVPSAL*RLESKVFRFLVAVF Trigger: GAAAACTGCCACTAAGAAGCGGAAGACTTTTGATTCCAGCCGGCAGAGAGCTGAAGGGACTGATATTCCCACGGTCAAACCTCTCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
||
| CDS-3UTR CAA 90 bp | TATTCTAAAGCCTACAAGGTTCATCACTACAGTGACAGTGCTTGTGCAAGTATAAGCTTGCCGCCCTCCTaGAGAGCCTGGTCCAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: YSKAYKVHHYSDSACASISLPPS*RAWSRP Trigger: AGGCCTGGACCAGGCTCTCAAGGAGGGCGGCAAGCT...TATACTTGCACAAGCACTGTCACTGTAGTGATGAACCTTGTAGGCTTTAGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
||
| CDS CCA 90 bp | AATGAACTCCTCGTGCTTTCGTCTCCAATTGGATGGCTTCTTTGGTaGTTCTGGCCTGGGTTTGAGAGGTTTGACCGTGGGAATATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: NELLVLSSPIGWLLW*FWPGFERFDRGNIS Trigger: ACTGATATTCCCACGGTCAAACCTCTCAAACCCAGGCCAGAACCACCAAAGAAGCCATCCAATTGGAGACGAAAGCACGAGGAGTTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
||
| CDS CCA 90 bp | CAGCAGAACTTTGCCCACTCAACAGGGTACTTTGTCCCACACTCATaGCAGAATTTTGGTAAGTGTCCAGATGAATTTCCCTCGATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QQNFAHSTGYFVPHS*QNFGKCPDEFPSMP Trigger: AGGCATCGAGGGAAATTCATCTGGACACTTACCAAAATTCTGCCATGAGTGTGGGACAAAGTACCCTGTTGAGTGGGCAAAGTTCTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS-3UTR CAA 90 bp | CCAGTATCTCATTCTCCTATGATACTATTGGTCATAGGCACCAATGACAGCACCCTGGGTTTGAGAGGTTaGACCGTGGGAATATCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PVSHSPMILLVIGTNDSTLGLRG*TVGISV Trigger: GACTGATATTCCCACGGTCAAACCTCTCAAACCCAG...GGTGCTGTCATTGGTGCCTATGACCAATAGTATCATAGGAGAATGAGATACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS-3UTR CAA 90 bp | AGGAATTTAACACTAGTTGCTGAAGAGTTCAGCTGGGAAAATGACCTCACACCCACTCAACAGGGTACTTaGTCCCACACTCATGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RNLTLVAEEFSWENDLTPTQQGT*SHTHGR Trigger: TCTGCCATGAGTGTGGGACAAAGTACCCTGTTGAGT...GGGTGTGAGGTCATTTTCCCAGCTGAACTCTTCAGCAACTAGTGTTAAATTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| CDS-3UTR CAA 90 bp | CCAGTATCTCATTCTCCTATGATACTATTGGTCATAGGCACCAATGACAGCACCACTCAACAGGGTACTTaGTCCCACACTCATGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PVSHSPMILLVIGTNDSTTQQGT*SHTHGR Trigger: TCTGCCATGAGTGTGGGACAAAGTACCCTGTTGAGT...GGTGCTGTCATTGGTGCCTATGACCAATAGTATCATAGGAGAATGAGATACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS GCA 90 bp | CAAAGTCTTTCTTTTGTTGGTAAGCACCCCTGCCACAGAATTTCTTaGCAAACTAGGAGGTGTGGTATTTCTAGCCTTGGTGTTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QSLSFVGKHPCHRIS*QTRRCGISSLGVSS Trigger: GGAGCTAACACCAAGGCTAGAAATACCACACCTCCTAGTTTGGCAAGAAATTCTGTGGCAGGGGTGCTTACCAACAAAAGAAAGACTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| CDS-3UTR CAA 90 bp | AATTTAACACTAGTTGCTGAAGAGTTCAGCTGGGAAAATGACCTCACACCCACTAATTGGATGGCTTCTTaGGTGGTTCTGGCCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: NLTLVAEEFSWENDLTPTNWMAS*VVLAWV Trigger: AACCCAGGCCAGAACCACCAAAGAAGCCATCCAATT...AGTGGGTGTGAGGTCATTTTCCCAGCTGAACTCTTCAGCAACTAGTGTTAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS-3UTR CAA 90 bp | ATGCAACAAGAAAGGAAGCATAAGGTGAGCAAAAGGACTCATTACCACAGGTTTCTGGGTTTGAGAGGTTaGACCGTGGGAATATCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: MQQERKHKVSKRTHYHRFLGLRG*TVGISV Trigger: GACTGATATTCCCACGGTCAAACCTCTCAAACCCAG...AAACCTGTGGTAATGAGTCCTTTTGCTCACCTTATGCTTCCTTTCTTGTTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| CDS-3UTR CAA 90 bp | AACATGCAACAAGAAAGGAAGCATAAGGTGAGCAAAAGGACTCATTACCACAGGGTCAAAGTCTTTCTTTaGTTGGTAAGCACCCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: NMQQERKHKVSKRTHYHRVKVFL*LVSTPA Trigger: GGCAGGGGTGCTTACCAACAAAAGAAAGACTTTGAC...CCTGTGGTAATGAGTCCTTTTGCTCACCTTATGCTTCCTTTCTTGTTGCATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| CDS GCA 90 bp | TGCATAGTTCTCAGTCAAAGTCTTTCTTTTGTTGGTAAGCACCCCTaGCACAGAATTTCTTGCCAAACTAGGAGGTGTGGTATTTCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: CIVLSQSLSFVGKHP*HRISCQTRRCGISS Trigger: GCTAGAAATACCACACCTCCTAGTTTGGCAAGAAATTCTGTGGCAGGGGTGCTTACCAACAAAAGAAAGACTTTGACTGAGAACTATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| CDS-3UTR CAA 90 bp | ATGCAACAAGAAAGGAAGCATAAGGTGAGCAAAAGGACTCATTACCACAGGTTTTGCTTTCGTCTCCAATaGGATGGCTTCTTTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: MQQERKHKVSKRTHYHRFCFRLQ*DGFFGG Trigger: ACCACCAAAGAAGCCATCCAATTGGAGACGAAAGCA...AAACCTGTGGTAATGAGTCCTTTTGCTCACCTTATGCTTCCTTTCTTGTTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| CDS TCA 90 bp | CCTGTTCTTTACAAAAGTTTATATGTCTGTCGGCTGCATTTTCATTaGATCTCCTCTGGCAATACGGACACTGGATGTAATCTGGGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: PVLYKSLYVCRLHFH*ISSGNTDTGCNLGR Trigger: ACGACCCAGATTACATCCAGTGTCCGTATTGCCAGAGGAGATTCAATGAAAATGCAGCCGACAGACATATAAACTTTTGTAAAGAACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS-3UTR CAA 90 bp | AATTTAACACTAGTTGCTGAAGAGTTCAGCTGGGAAAATGACCTCACACCCACTCAACAAGTCTCCAACTaGCACAACACTTCCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NLTLVAEEFSWENDLTPTQQVSN*HNTSIF Trigger: GAAAATGGAAGTGTTGTGCAAGTTGGAGACTTGTTG...AGTGGGTGTGAGGTCATTTTCCCAGCTGAACTCTTCAGCAACTAGTGTTAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS-3UTR CAA 90 bp | TATTCTAAAGCCTACAAGGTTCATCACTACAGTGACAGTGCTTGTGCAAGTATATGCTTTCGTCTCCAATaGGATGGCTTCTTTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: YSKAYKVHHYSDSACASICFRLQ*DGFFGG Trigger: ACCACCAAAGAAGCCATCCAATTGGAGACGAAAGCA...TATACTTGCACAAGCACTGTCACTGTAGTGATGAACCTTGTAGGCTTTAGAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS-3UTR CAA 90 bp | TTGCTGAAGAGTTCAGCTGGGAAAATGACCTCACACCCACTAACAATGAATAAAAAAGTCTTTCTTTTGTaGGTAAGCACCCCTGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LLKSSAGKMTSHPLTMNKKVFLL*VSTPAT Trigger: TGTGGCAGGGGTGCTTACCAACAAAAGAAAGACTTT...TTTATTCATTGTTAGTGGGTGTGAGGTCATTTTCCCAGCTGAACTCTTCAGCAA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| CDS-3UTR CAA 90 bp | CCAGTATCTCATTCTCCTATGATACTATTGGTCATAGGCACCAATGACAGCACCACTCATGGCAGAATTTaGGTAAGTGTCCAGATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PVSHSPMILLVIGTNDSTTHGRI*VSVQMN Trigger: ATTCATCTGGACACTTACCAAAATTCTGCCATGAGT...GGTGCTGTCATTGGTGCCTATGACCAATAGTATCATAGGAGAATGAGATACTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS-3UTR CAA 90 bp | TTAATACTGCAAAGACTAATAAAGGAAAGCCACTCTTCAGAGGAGCTATGCATGATTCACAGCAGAACTTaGCCCACTCAACAGGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: LILQRLIKESHSSEELCMIHSRT*PTQQGT Trigger: AGTACCCTGTTGAGTGGGCAAAGTTCTGCTGTGAAT...CATGCATAGCTCCTCTGAAGAGTGGCTTTCCTTTATTAGTCTTTGCAGTATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| CDS-3UTR CAA 90 bp | ACAGATTCTCCAGTATCTCATTCTCCTATGATACTATTGGTCATAGGCACCAATATTCACAGCAGAACTTaGCCCACTCAACAGGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: TDSPVSHSPMILLVIGTNIHSRT*PTQQGT Trigger: AGTACCCTGTTGAGTGGGCAAAGTTCTGCTGTGAAT...ATTGGTGCCTATGACCAATAGTATCATAGGAGAATGAGATACTGGAGAATCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS GCA 90 bp | AATACGTGCTGCCTGTTCTTTACAAAAGTTTATATGTCTGTCGGCTaGATTTTCATTGAATCTCCTCTGGCAATACGGACACTGGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: NTCCLFFTKVYMSVG*IFIESPLAIRTLDV Trigger: TACATCCAGTGTCCGTATTGCCAGAGGAGATTCAATGAAAATGCAGCCGACAGACATATAAACTTTTGTAAAGAACAGGCAGCACGTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS-3UTR CAA 90 bp | TCTCATTCTCCTATGATACTATTGGTCATAGGCACCAATGACAGCACCTCTTTACAACAAGTCTCCAACTaGCACAACACTTCCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SHSPMILLVIGTNDSTSLQQVSN*HNTSIF Trigger: GAAAATGGAAGTGTTGTGCAAGTTGGAGACTTGTTG...TAAAGAGGTGCTGTCATTGGTGCCTATGACCAATAGTATCATAGGAGAATGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS-3UTR CAA 90 bp | TATTCTAAAGCCTACAAGGTTCATCACTACAGTGACAGTGCTTGTGCAAGTATAACTCATGGCAGAATTTaGGTAAGTGTCCAGATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: YSKAYKVHHYSDSACASITHGRI*VSVQMN Trigger: ATTCATCTGGACACTTACCAAAATTCTGCCATGAGT...TATACTTGCACAAGCACTGTCACTGTAGTGATGAACCTTGTAGGCTTTAGAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS GCA 90 bp | CTTTCCTTTAGAATCAGTAGAAAATTTGCCCTTATTACTAATACGTaGTGCCTGTTCTTTACAAAAGTTTATATGTCTGTCGGCTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: LSFRISRKFALITNT*CLFFTKVYMSVGCI Trigger: AATGCAGCCGACAGACATATAAACTTTTGTAAAGAACAGGCAGCACGTATTAGTAATAAGGGCAAATTTTCTACTGATTCTAAAGGAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS CAA 72 bp | GAGGGCGGAGGAGGAGGAGGCAGCTTGCCGCCCTCCTaGAGAGCCTGGTCCAGGCCTTTCGCTGCTCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: EGGGGGGSLPPS*RAWSRPFAALM Trigger: CATCAGAGCAGCGAAAGGCCTGGACCAGGCTCTCAAGGAGGGCGGCAAGCTGCCTCCTCCTCCTCCGCCCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS CCA 72 bp | GGAGGAGGAGGCAGCTTGCCGCCCTCCTTGAGAGCCTaGTCCAGGCCTTTCGCTGCTCTGATGGTGGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: GGGGSLPPSLRA*SRPFAALMVAM Trigger: CATTGCCACCATCAGAGCAGCGAAAGGCCTGGACCAGGCTCTCAAGGAGGGCGGCAAGCTGCCTCCTCCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS GCA 72 bp | GCCGCCCTCCTTGAGAGCCTGGTCCAGGCCTTTCGCTaGTCTGATGGTGGCAATGAACTCCTCGTGCTTTCG | + |
|
Preference number: 6 (lower is better) Translates to: AALLESLVQAFR*SDGGNELLVLS Trigger: CGAAAGCACGAGGAGTTCATTGCCACCATCAGAGCAGCGAAAGGCCTGGACCAGGCTCTCAAGGAGGGCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS CCA 72 bp | GAATCTCCTCTGGCAATACGGACACTGGATGTAATCTaGGTCGTAAGAGGGCGGAGGAGGAGGAGGCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: ESPLAIRTLDVI*VVRGRRRRRQL Trigger: AAGCTGCCTCCTCCTCCTCCGCCCTCTTACGACCCAGATTACATCCAGTGTCCGTATTGCCAGAGGAGATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS CCA 72 bp | CTCGTGCTTTCGTCTCCAATTGGATGGCTTCTTTGGTaGTTCTGGCCTGGGTTTGAGAGGTTTGACCGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LVLSSPIGWLLW*FWPGFERFDRG Trigger: CCCACGGTCAAACCTCTCAAACCCAGGCCAGAACCACCAAAGAAGCCATCCAATTGGAGACGAAAGCACGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
||
| CDS CAA 72 bp | GGCTTCTTTGGTGGTTCTGGCCTGGGTTTGAGAGGTTaGACCGTGGGAATATCAGTCCCTTCAGCTCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GFFGGSGLGLRG*TVGISVPSALC Trigger: GCAGAGAGCTGAAGGGACTGATATTCCCACGGTCAAACCTCTCAAACCCAGGCCAGAACCACCAAAGAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
||
| CDS CCA 72 bp | CTCCTCGTGCTTTCGTCTCCAATTGGATGGCTTCTTTaGTGGTTCTGGCCTGGGTTTGAGAGGTTTGACCGT | + |
|
Preference number: 6 (lower is better) Translates to: LLVLSSPIGWLL*WFWPGFERFDR Trigger: ACGGTCAAACCTCTCAAACCCAGGCCAGAACCACCAAAGAAGCCATCCAATTGGAGACGAAAGCACGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
||
| CDS CCA 72 bp | GGCAATGAACTCCTCGTGCTTTCGTCTCCAATTGGATaGCTTCTTTGGTGGTTCTGGCCTGGGTTTGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GNELLVLSSPIG*LLWWFWPGFER Trigger: CCTCTCAAACCCAGGCCAGAACCACCAAAGAAGCCATCCAATTGGAGACGAAAGCACGAGGAGTTCATTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
||
| CDS CAA 90 bp | GCTGCTCTGATGGTGGCAATGAACTCCTCGTGCTTTCGTCTCCAATaGGATGGCTTCTTTGGTGGTTCTGGCCTGGGTTTGAGAGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: AALMVAMNSSCFRLQ*DGFFGGSGLGLRGL Trigger: CAAACCTCTCAAACCCAGGCCAGAACCACCAAAGAAGCCATCCAATTGGAGACGAAAGCACGAGGAGTTCATTGCCACCATCAGAGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
||
| CDS GCA 72 bp | TCAGAGCCAACGGGAAGAAGGTCCTTCCGCAAATCTTaGAGGGCAACAAGTCTCCAACTTGCACAACACTTC | + |
|
Preference number: 6 (lower is better) Translates to: SEPTGRRSFRKS*RATSLQLAQHF Trigger: GAAGTGTTGTGCAAGTTGGAGACTTGTTGCCCTGCAAGATTTGCGGAAGGACCTTCTTCCCGTTGGCTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
||
| CDS GCA 72 bp | CCTTTCGCTGCTCTGATGGTGGCAATGAACTCCTCGTaGTTTCGTCTCCAATTGGATGGCTTCTTTGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PFAALMVAMNSS*FRLQLDGFFGG Trigger: ACCACCAAAGAAGCCATCCAATTGGAGACGAAAGCACGAGGAGTTCATTGCCACCATCAGAGCAGCGAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
||
| CDS CAA 72 bp | ATGGTGGCAATGAACTCCTCGTGCTTTCGTCTCCAATaGGATGGCTTCTTTGGTGGTTCTGGCCTGGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: MVAMNSSCFRLQ*DGFFGGSGLGL Trigger: CAAACCCAGGCCAGAACCACCAAAGAAGCCATCCAATTGGAGACGAAAGCACGAGGAGTTCATTGCCACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS CAA 72 bp | TTCAGAGCCAACGGGAAGAAGGTCCTTCCGCAAATCTaGCAGGGCAACAAGTCTCCAACTTGCACAACACTT | + |
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Preference number: 6 (lower is better) Translates to: FRANGKKVLPQI*QGNKSPTCTTL Trigger: AAGTGTTGTGCAAGTTGGAGACTTGTTGCCCTGCAAGATTTGCGGAAGGACCTTCTTCCCGTTGGCTCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS CAA 72 bp | CCTTCCGCAAATCTTGCAGGGCAACAAGTCTCCAACTaGCACAACACTTCCATTTTCTTCCAGTCCGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: PSANLAGQQVSN*HNTSIFFQSVH Trigger: ATGGACGGACTGGAAGAAAATGGAAGTGTTGTGCAAGTTGGAGACTTGTTGCCCTGCAAGATTTGCGGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS CAA 90 bp | CTGTTAACTGAAGATGCTTTACCCGTGGGCACACCTACAATTGTTTaGCTAGTAGTACTTGGCTGTGGCAGTCGGGAGGATCCTGATGAT | + |
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Preference number: 6 (lower is better) Translates to: LLTEDALPVGTPTIV*LVVLGCGSREDPDD Trigger: ATCATCAGGATCCTCCCGACTGCCACAGCCAAGTACTACTAGCAAAACAATTGTAGGTGTGCCCACGGGTAAAGCATCTTCAGTTAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS CAA 90 bp | TTGCCCACTCAACAGGGTACTTTGTCCCACACTCATGGCAGAATTTaGGTAAGTGTCCAGATGAATTTCCCTCGATGCCTTTACTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: LPTQQGTLSHTHGRI*VSVQMNFPRCLYCF Trigger: GAAACAGTAAAGGCATCGAGGGAAATTCATCTGGACACTTACCAAAATTCTGCCATGAGTGTGGGACAAAGTACCCTGTTGAGTGGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS CAA 90 bp | GAATGCCACATTCACAGCAGAACTTTGCCCACTCAACAGGGTACTTaGTCCCACACTCATGGCAGAATTTTGGTAAGTGTCCAGATGAAT | + |
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Preference number: 6 (lower is better) Translates to: ECHIHSRTLPTQQGT*SHTHGRILVSVQMN Trigger: ATTCATCTGGACACTTACCAAAATTCTGCCATGAGTGTGGGACAAAGTACCCTGTTGAGTGGGCAAAGTTCTGCTGTGAATGTGGCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS GCA 72 bp | CTCAGTCAAAGTCTTTCTTTTGTTGGTAAGCACCCCTaGCACAGAATTTCTTGCCAAACTAGGAGGTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: LSQSLSFVGKHP*HRISCQTRRCG Trigger: ACCACACCTCCTAGTTTGGCAAGAAATTCTGTGGCAGGGGTGCTTACCAACAAAAGAAAGACTTTGACTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051064.9 |
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| CDS CCA 72 bp | TTTGCCCACTCAACAGGGTACTTTGTCCCACACTCATaGCAGAATTTTGGTAAGTGTCCAGATGAATTTCCC | + |
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Preference number: 6 (lower is better) Translates to: FAHSTGYFVPHS*QNFGKCPDEFP Trigger: GGGAAATTCATCTGGACACTTACCAAAATTCTGCCATGAGTGTGGGACAAAGTACCCTGTTGAGTGGGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS CAA 72 bp | CAACAGGGTACTTTGTCCCACACTCATGGCAGAATTTaGGTAAGTGTCCAGATGAATTTCCCTCGATGCCTT | + |
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Preference number: 6 (lower is better) Translates to: QQGTLSHTHGRI*VSVQMNFPRCL Trigger: AAGGCATCGAGGGAAATTCATCTGGACACTTACCAAAATTCTGCCATGAGTGTGGGACAAAGTACCCTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS CAA 72 bp | ATTCACAGCAGAACTTTGCCCACTCAACAGGGTACTTaGTCCCACACTCATGGCAGAATTTTGGTAAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: IHSRTLPTQQGT*SHTHGRILVSV Trigger: GACACTTACCAAAATTCTGCCATGAGTGTGGGACAAAGTACCCTGTTGAGTGGGCAAAGTTCTGCTGTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS CAA 72 bp | GAATCATTCTTCGAATGCCACATTCACAGCAGAACTTaGCCCACTCAACAGGGTACTTTGTCCCACACTCAT | + |
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Preference number: 6 (lower is better) Translates to: ESFFECHIHSRT*PTQQGTLSHTH Trigger: ATGAGTGTGGGACAAAGTACCCTGTTGAGTGGGCAAAGTTCTGCTGTGAATGTGGCATTCGAAGAATGATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS CCA 72 bp | TTTAAGCGGAGACGGCTTATACTGTGGCCGAGAAGCTaGCTTTCCTTTAGAATCAGTAGAAAATTTGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: FKRRRLILWPRS*LSFRISRKFAL Trigger: AAGGGCAAATTTTCTACTGATTCTAAAGGAAAGCCAGCTTCTCGGCCACAGTATAAGCCGTCTCCGCTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS GCA 72 bp | TGCCTGTTCTTTACAAAAGTTTATATGTCTGTCGGCTaGATTTTCATTGAATCTCCTCTGGCAATACGGACA | + |
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Preference number: 6 (lower is better) Translates to: CLFFTKVYMSVG*IFIESPLAIRT Trigger: TGTCCGTATTGCCAGAGGAGATTCAATGAAAATGCAGCCGACAGACATATAAACTTTTGTAAAGAACAGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS CAA 90 bp | TACTGTGGCCGAGAAGCTGGCTTTCCTTTAGAATCAGTAGAAAATTaGCCCTTATTACTAATACGTGCTGCCTGTTCTTTACAAAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: YCGREAGFPLESVEN*PLLLIRAACSLQKF Trigger: AAACTTTTGTAAAGAACAGGCAGCACGTATTAGTAATAAGGGCAAATTTTCTACTGATTCTAAAGGAAAGCCAGCTTCTCGGCCACAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS TCA 72 bp | TACAAAAGTTTATATGTCTGTCGGCTGCATTTTCATTaGATCTCCTCTGGCAATACGGACACTGGATGTAAT | + |
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Preference number: 6 (lower is better) Translates to: YKSLYVCRLHFH*ISSGNTDTGCN Trigger: ATTACATCCAGTGTCCGTATTGCCAGAGGAGATTCAATGAAAATGCAGCCGACAGACATATAAACTTTTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS CAA 72 bp | CGAGAAGCTGGCTTTCCTTTAGAATCAGTAGAAAATTaGCCCTTATTACTAATACGTGCTGCCTGTTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: REAGFPLESVEN*PLLLIRAACSL Trigger: TAAAGAACAGGCAGCACGTATTAGTAATAAGGGCAAATTTTCTACTGATTCTAAAGGAAAGCCAGCTTCTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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| CDS GCA 72 bp | ATCAGTAGAAAATTTGCCCTTATTACTAATACGTGCTaGCTGTTCTTTACAAAAGTTTATATGTCTGTCGGC | + |
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Preference number: 6 (lower is better) Translates to: ISRKFALITNTC*LFFTKVYMSVG Trigger: GCCGACAGACATATAAACTTTTGTAAAGAACAGGCAGCACGTATTAGTAATAAGGGCAAATTTTCTACTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051064.9 ENSMUST00000193010.2 |
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