Pregenerated sensors for ZBTB8B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048485Ensembl transcript IDs: ENSMUST00000053042.6, ENSMUST00000106046.8
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGCCCAGGAATGTCACGAGGGTGTGCATATCCAGGTTGCATGTCTaGGAAATGACTAAGCAGCCTTTTGATTTTTGCCCAAACGACTTG | + |
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Preference number: 1 (lower is better) Translates to: MPRNVTRVCISRLHV*EMTKQPFDFCPNDL Trigger: CAAGTCGTTTGGGCAAAAATCAAAAGGCTGCTTAGTCATTTCCCAGACATGCAACCTGGATATGCACACCCTCGTGACATTCCTGGGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR TCA 90 bp | GGAATGTCACGAGGGTGTGCATATCCAGGTTGCATGTCTGGGAAATaGCTAAGCAGCCTTTTGATTTTTGCCCAAACGACTTGCTTTATA | + |
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Preference number: 1 (lower is better) Translates to: GMSRGCAYPGCMSGK*LSSLLIFAQTTCFI Trigger: TATAAAGCAAGTCGTTTGGGCAAAAATCAAAAGGCTGCTTAGTCATTTCCCAGACATGCAACCTGGATATGCACACCCTCGTGACATTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCGCATGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGTCAGAACTTCAGCAGGCGGGACATGCATaGCCAGGAATGTCACGAGGG | + |
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Preference number: 2 (lower is better) Translates to: WRMPLIPALGRQRQSELQQAGHA*PGMSRG Trigger: CCCTCGTGACATTCCTGGGCATGCATGTCCCGCCTG...CTGAAGTTCTGACTGCCTCTGCCTCCCAAGGGCTGGGATTAAAGGCATGCGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCGCATGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGTCAGAACTTCAGTCTGCCCTGGCTCACTaGCTCTTCTCTGGGGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: WRMPLIPALGRQRQSELQSALAH*LFSGGS Trigger: TGAGCCCCCAGAGAAGAGCCAGTGAGCCAGGGCAGA...CTGAAGTTCTGACTGCCTCTGCCTCCCAAGGGCTGGGATTAAAGGCATGCGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR GCA 90 bp | GACAATTGTGAGCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAACAGGCGGGACATGCATaGCCAGGAATGTCACGAGGG | + |
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Preference number: 2 (lower is better) Translates to: DNCELPCGCWELNQGPLEQAGHA*PGMSRG Trigger: CCCTCGTGACATTCCTGGGCATGCATGTCCCGCCTG...TTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGCTCACAATTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR GCA 90 bp | CATGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGTCAGAACTTCAGGAGTTATGTCAGGCGGGACATaGATGCCCAGGAATGTCACG | + |
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Preference number: 2 (lower is better) Translates to: HAFNPSPWEAEAVRTSGVMSGGT*MPRNVT Trigger: CGTGACATTCCTGGGCATGCATGTCCCGCCTGACAT...AACTCCTGAAGTTCTGACTGCCTCTGCCTCCCAAGGGCTGGGATTAAAGGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCGCATGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGTCAGAACTTCAGTCATTTCAAGAAGCCTaGCAGGGGAGAGACAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: WRMPLIPALGRQRQSELQSFQEA*QGRDRG Trigger: ACCTCTGTCTCTCCCCTGCCAGGCTTCTTGAAATGA...CTGAAGTTCTGACTGCCTCTGCCTCCCAAGGGCTGGGATTAAAGGCATGCGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR TCA 90 bp | GACAATTGTGAGCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAATGGCTGCAGAGTGGGTaGAAAGCAGACCGGCTTGAA | + |
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Preference number: 2 (lower is better) Translates to: DNCELPCGCWELNQGPLEWLQSG*KADRLE Trigger: TTCAAGCCGGTCTGCTTTTCACCCACTCTGCAGCCA...TTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGCTCACAATTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR TCA 90 bp | GACAATTGTGAGCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAAGCTTTGCTACAGTTGTaGCCTGGCTGCAGAGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: DNCELPCGCWELNQGPLEALLQL*PGCRVG Trigger: ACCCACTCTGCAGCCAGGTCACAACTGTAGCAAAGC...TTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGCTCACAATTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCGCATGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGTCAGAACTTCAGGGCAGAGAGACCTGGTaGTTTCACTGCTGTTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: WRMPLIPALGRQRQSELQGRETW*FHCCLK Trigger: TTTCAAACAGCAGTGAAATCACCAGGTCTCTCTGCC...CTGAAGTTCTGACTGCCTCTGCCTCCCAAGGGCTGGGATTAAAGGCATGCGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAAGAGCAGCCAATGTGTCAGTGTTTGTCTaGATAAAGCTTCCTCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: AAMWVLGIEPRSSGRAANVSVFV*IKLPPA Trigger: GGCTGGAGGAAGCTTTATGCAGACAAACACTGACAC...ATTGGCTGCTCTTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR GCA 90 bp | TGCAGTACTAGAGATTGGACCCAGGGACTTCCTAATGACAGACAAGGAGCTGTAACGGGGACAGTACTCTaGCCTGGCTCACTGGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: CSTRDWTQGLPNDRQGAVTGTVL*PGSLAL Trigger: AAGAGCCAGTGAGCCAGGGCAGAGTACTGTCCCCGT...TACAGCTCCTTGTCTGTCATTAGGAAGTCCCTGGGTCCAATCTCTAGTACTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR CCA 90 bp | CATGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGTCAGAACTTCAGGAGTTTCATTTCAAGAAGCCTaGCAGGGGAGAGACAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: HAFNPSPWEAEAVRTSGVSFQEA*QGRDRG Trigger: ACCTCTGTCTCTCCCCTGCCAGGCTTCTTGAAATGA...AACTCCTGAAGTTCTGACTGCCTCTGCCTCCCAAGGGCTGGGATTAAAGGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR GCA 90 bp | CATGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGTCAGAACTTCAGGAGTTACACTCGACTTGCTTTaGTACAGTTGTGACCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: HAFNPSPWEAEAVRTSGVTLDLL*YSCDLA Trigger: AGCCAGGTCACAACTGTAGCAAAGCAAGTCGAGTGT...AACTCCTGAAGTTCTGACTGCCTCTGCCTCCCAAGGGCTGGGATTAAAGGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR CAA 90 bp | GGGACATGCATGCCCAGGAATGTCACGAGGGTGTGCATATCCAGGTaGCATGTCTGGGAAATGACTAAGCAGCCTTTTGATTTTTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: GTCMPRNVTRVCISR*HVWEMTKQPFDFCP Trigger: TGGGCAAAAATCAAAAGGCTGCTTAGTCATTTCCCAGACATGCAACCTGGATATGCACACCCTCGTGACATTCCTGGGCATGCATGTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGAGCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAAGAGCAGTGCATGTCTGGGAAATaGCTAAGCAGCCTTTTGATT | + |
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Preference number: 2 (lower is better) Translates to: CELPCGCWELNQGPLEEQCMSGK*LSSLLI Trigger: AATCAAAAGGCTGCTTAGTCATTTCCCAGACATGCA...CTGCTCTTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGCTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR TCA 90 bp | CATGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGTCAGAACTTCAGGAGTTTGCATGTCTGGGAAATaGCTAAGCAGCCTTTTGATT | + |
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Preference number: 2 (lower is better) Translates to: HAFNPSPWEAEAVRTSGVCMSGK*LSSLLI Trigger: AATCAAAAGGCTGCTTAGTCATTTCCCAGACATGCA...AACTCCTGAAGTTCTGACTGCCTCTGCCTCCCAAGGGCTGGGATTAAAGGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGAGCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAAGAGCAGTGGTCTTCTAAAACCTaGATGTTAGTTAGGCATGCA | + |
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Preference number: 2 (lower is better) Translates to: CELPCGCWELNQGPLEEQWSSKT*MLVRHA Trigger: TGCATGCCTAACTAACATTCAGGTTTTAGAAGACCA...CTGCTCTTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGCTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR GCA 90 bp | GACAATTGTGAGCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAACCTCTCCAACCCTCATaGCGTCTTTCTTCCTTTAAA | + |
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Preference number: 2 (lower is better) Translates to: DNCELPCGCWELNQGPLEPLQPS*RLSSFK Trigger: TTTAAAGGAAGAAAGACGGCATGAGGGTTGGAGAGG...TTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGCTCACAATTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR CCA 90 bp | CATGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGTCAGAACTTCAGGAGTTTGCACCATTCATCCATaGTCTTTCCTGTCCTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: HAFNPSPWEAEAVRTSGVCTIHP*SFLSFH Trigger: ATGAAAGGACAGGAAAGACCATGGATGAATGGTGCA...AACTCCTGAAGTTCTGACTGCCTCTGCCTCCCAAGGGCTGGGATTAAAGGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR CAA 90 bp | ACTGGAGTTAGAGACAATTGTGAGCTGCCATGTGGGTGCTGGGAATaGAACCAAGGTCCTCTGGAAGAGCAGCCAATGATCTTAACCATT | + |
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Preference number: 2 (lower is better) Translates to: TGVRDNCELPCGCWE*NQGPLEEQPMILTI Trigger: AATGGTTAAGATCATTGGCTGCTCTTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGCTCACAATTGTCTCTAACTCCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAAGAGCAGCCAATCAGCCTTTTGATTTTTaGCCAAACGACTTGCTTTAT | + |
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Preference number: 2 (lower is better) Translates to: AAMWVLGIEPRSSGRAANQPFDF*PNDLLY Trigger: ATAAAGCAAGTCGTTTGGGCAAAAATCAAAAGGCTG...ATTGGCTGCTCTTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGAGCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAAGAGCAGAGCATAGTGCTAAGCTaGGAGGTTTTCTTATTTATC | + |
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Preference number: 2 (lower is better) Translates to: CELPCGCWELNQGPLEEQSIVLS*EVFLFI Trigger: GATAAATAAGAAAACCTCCCAGCTTAGCACTATGCT...CTGCTCTTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGCTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR GCA 90 bp | CATGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGTCAGAACTTCAGGAGTTCAGCCTTTTGATTTTTaGCCAAACGACTTGCTTTAT | + |
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Preference number: 2 (lower is better) Translates to: HAFNPSPWEAEAVRTSGVQPFDF*PNDLLY Trigger: ATAAAGCAAGTCGTTTGGGCAAAAATCAAAAGGCTG...AACTCCTGAAGTTCTGACTGCCTCTGCCTCCCAAGGGCTGGGATTAAAGGCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR GCA 90 bp | ATGCTTTTAAGAAAAGTCTGCAAGCTACCTTCTAGTGCACCATTCATCCATGGTGTGTCAGTGTTTGTCTaGATAAAGCTTCCTCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: MLLRKVCKLPSSAPFIHGVSVFV*IKLPPA Trigger: GGCTGGAGGAAGCTTTATGCAGACAAACACTGACAC...ACCATGGATGAATGGTGCACTAGAAGGTAGCTTGCAGACTTTTCTTAAAAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTGCATATCCAGGTTGCATGTCTGGGAAATGACTAAGCAGCCTTTTGATTTTAGCATAGTGCTAAGCTaGGAGGTTTTCTTATTTATC | + |
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Preference number: 2 (lower is better) Translates to: VCISRLHVWEMTKQPFDFSIVLS*EVFLFI Trigger: GATAAATAAGAAAACCTCCCAGCTTAGCACTATGCT...AAAATCAAAAGGCTGCTTAGTCATTTCCCAGACATGCAACCTGGATATGCACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR CCA 72 bp | TCAAATAGCAGAGTAGACGGGGACAGTACTCTGCCCTaGCTCACTGGCTCTTCTCTGGGGGCTCATTTAACT | + |
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Preference number: 3 (lower is better) Translates to: SNSRVDGDSTLP*LTGSSLGAHLT Trigger: AGTTAAATGAGCCCCCAGAGAAGAGCCAGTGAGCCAGGGCAGAGTACTGTCCCCGTCTACTCTGCTATTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR CCA 72 bp | GGAGTTAGAGACAATTGTGAGCTGCCATGTGGGTGCTaGGAATTGAACCAAGGTCCTCTGGAAGAGCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: GVRDNCELPCGC*ELNQGPLEEQP Trigger: TGGCTGCTCTTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGCTCACAATTGTCTCTAACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR TCA 72 bp | AGGTCCTCTGGAAGAGCAGCCAATGATCTTAACCATTaGGCCACCTCTCCAACCCTCATGCCGTCTTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: RSSGRAANDLNH*ATSPTLMPSFF Trigger: GAAGAAAGACGGCATGAGGGTTGGAGAGGTGGCTCAATGGTTAAGATCATTGGCTGCTCTTCCAGAGGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR GCA 72 bp | ACTGGAGTTAGAGACAATTGTGAGCTGCCATGTGGGTaGTGGGAATTGAACCAAGGTCCTCTGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: TGVRDNCELPCG*WELNQGPLEEQ Trigger: CTGCTCTTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGCTCACAATTGTCTCTAACTCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR CAA 90 bp | GACAATTGTGAGCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAAGTGTGCATATCCAGGTaGCATGTCTGGGAAATGACT | + |
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Preference number: 3 (lower is better) Translates to: DNCELPCGCWELNQGPLEVCISR*HVWEMT Trigger: AGTCATTTCCCAGACATGCAACCTGGATATGCACAC...TTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGCTCACAATTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR CAA 90 bp | GACAATTGTGAGCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAATTAGAGACACTCGACTaGCTTTGCTACAGTTGTGAC | + |
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Preference number: 3 (lower is better) Translates to: DNCELPCGCWELNQGPLELETLD*LCYSCD Trigger: GTCACAACTGTAGCAAAGCAAGTCGAGTGTCTCTAA...TTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGCTCACAATTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR TCA 72 bp | ATTTCAAGAAGCCTGGCAGGGGAGAGACAGAGGTTCTaGCAACATACTCTTGCCACCTCTTCAGAAGACTGT | + |
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Preference number: 3 (lower is better) Translates to: ISRSLAGERQRF*QHTLATSSEDC Trigger: ACAGTCTTCTGAAGAGGTGGCAAGAGTATGTTGTCAGAACCTCTGTCTCTCCCCTGCCAGGCTTCTTGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR GCA 72 bp | CTGTCCTTTCATACTTTAGAGACACTCGACTTGCTTTaGTACAGTTGTGACCTGGCTGCAGAGTGGGTGAAA | + |
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Preference number: 3 (lower is better) Translates to: LSFHTLETLDLL*YSCDLAAEWVK Trigger: TTTCACCCACTCTGCAGCCAGGTCACAACTGTAGCAAAGCAAGTCGAGTGTCTCTAAAGTATGAAAGGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR CCA 72 bp | AATGTCACGAGGGTGTGCATATCCAGGTTGCATGTCTaGGAAATGACTAAGCAGCCTTTTGATTTTTGCCCA | + |
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Preference number: 3 (lower is better) Translates to: NVTRVCISRLHV*EMTKQPFDFCP Trigger: TGGGCAAAAATCAAAAGGCTGCTTAGTCATTTCCCAGACATGCAACCTGGATATGCACACCCTCGTGACATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| 3UTR-3UTR CAA 90 bp | TGGTCTTTCCTGTCCTTTCATACTTTAGAGACACTCGACTTGCTTTGCTACAGTGGGCCCAGAATAAACTaGCAATTTGTGTCAGTGTTT | + |
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Preference number: 3 (lower is better) Translates to: WSFLSFHTLETLDLLCYSGPRIN*QFVSVF Trigger: AAACACTGACACAAATTGCAAGTTTATTCTGGGCCC...ACTGTAGCAAAGCAAGTCGAGTGTCTCTAAAGTATGAAAGGACAGGAAAGACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR GCA 90 bp | TGGCAGGGGAGAGACAGAGGTTCTGACAACATACTCTTGCCACCTCTTCAGAAGTGCCGCTGCCGCCATTaGGGCAGCCACAGCGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: WQGRDRGSDNILLPPLQKCRCRH*GSHSGL Trigger: GAGGCCGCTGTGGCTGCCGCAATGGCGGCAGCGGCA...CTTCTGAAGAGGTGGCAAGAGTATGTTGTCAGAACCTCTGTCTCTCCCCTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR CCA 90 bp | TGTGAGCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAAGAGCAGGGCCGTTCGCCAGTGTaGGAGCGGATGTGCCGTTTG | + |
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Preference number: 4 (lower is better) Translates to: CELPCGCWELNQGPLEEQGRSPV*ERMCRL Trigger: CAAACGGCACATCCGCTCCCACACTGGCGAACGGCC...CTGCTCTTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGCTCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR TCA 90 bp | TGGCGCATGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGTCAGAACTTCAGTGTTCCTGTGGGCCTTaGAGATGCGCCCTTCCACGA | + |
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Preference number: 4 (lower is better) Translates to: WRMPLIPALGRQRQSELQCSCGP*RCALPR Trigger: TCGTGGAAGGGCGCATCTTCAAGGCCCACAGGAACA...CTGAAGTTCTGACTGCCTCTGCCTCCCAAGGGCTGGGATTAAAGGCATGCGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR GCA 90 bp | TGCAGTACTAGAGATTGGACCCAGGGACTTCCTAATGACAGACAAGGAGCTGTATGCCGCTGCCGCCATTaGGGCAGCCACAGCGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: CSTRDWTQGLPNDRQGAVCRCRH*GSHSGL Trigger: GAGGCCGCTGTGGCTGCCGCAATGGCGGCAGCGGCA...TACAGCTCCTTGTCTGTCATTAGGAAGTCCCTGGGTCCAATCTCTAGTACTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR CCA 90 bp | TGGCGCATGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGTCAGAACTTCAGGTCAGATCCAAGGCCTaGTTACTGGGCAGGCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: WRMPLIPALGRQRQSELQVRSKA*LLGRPS Trigger: GGAAGGCCTGCCCAGTAACCAGGCCTTGGATCTGAC...CTGAAGTTCTGACTGCCTCTGCCTCCCAAGGGCTGGGATTAAAGGCATGCGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR GCA 90 bp | CATGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGTCAGAACTTCAGGAGTTCTCCGAAGGTGCTCCTaGCGGGTGAACCTCTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: HAFNPSPWEAEAVRTSGVLRRCS*RVNLLP Trigger: TGGCAAGAGGTTCACCCGGCAGGAGCACCTTCGGAG...AACTCCTGAAGTTCTGACTGCCTCTGCCTCCCAAGGGCTGGGATTAAAGGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR CCA 90 bp | TGTGAGCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAAGAGCAGGTCAGATCCAAGGCCTaGTTACTGGGCAGGCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: CELPCGCWELNQGPLEEQVRSKA*LLGRPS Trigger: GGAAGGCCTGCCCAGTAACCAGGCCTTGGATCTGAC...CTGCTCTTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGCTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR TCA 90 bp | TGGCGCATGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGTCAGAACTTCAGTGCGCCCTTCCACGATaGTGCTGCAGTCACAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: WRMPLIPALGRQRQSELQCALPR*CCSHRK Trigger: TTTTCTGTGACTGCAGCATCATCGTGGAAGGGCGCA...CTGAAGTTCTGACTGCCTCTGCCTCCCAAGGGCTGGGATTAAAGGCATGCGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAAGAGCAGCCAATCCTCCACCTCCACCCTaGCAACATCGAATTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: AAMWVLGIEPRSSGRAANPPPPP*QHRIPP Trigger: AGGTGGAATTCGATGTTGCCAGGGTGGAGGTGGAGG...ATTGGCTGCTCTTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR CCA 90 bp | CATGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGTCAGAACTTCAGGAGTTAAGCGCCGCAGTCCTTaGGACAGGTGGCTCGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HAFNPSPWEAEAVRTSGVKRRSP*DRWLVK Trigger: CTTTACGAGCCACCTGTCCCAAGGACTGCGGCGCTT...AACTCCTGAAGTTCTGACTGCCTCTGCCTCCCAAGGGCTGGGATTAAAGGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR TCA 90 bp | TGTGAGCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAAGAGCAGAGCTGGCAGCTGACATaGCTTCGATCACATTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: CELPCGCWELNQGPLEEQSWQLT*LRSHSR Trigger: GCGAGAATGTGATCGAAGTCATGTCAGCTGCCAGCT...CTGCTCTTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGCTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR CCA 90 bp | TGGCGCATGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGTCAGAACTTCAGAATAGGATGTTCCTGTaGGCCTTGAAGATGCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WRMPLIPALGRQRQSELQNRMFL*ALKMRP Trigger: AGGGCGCATCTTCAAGGCCCACAGGAACATCCTATT...CTGAAGTTCTGACTGCCTCTGCCTCCCAAGGGCTGGGATTAAAGGCATGCGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAAGAGCAGCCAATAGGAGACAAAGCTCTTaGTGCCACAGGAAGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AAMWVLGIEPRSSGRAANRRQSS*CHRKSP Trigger: AGGGGACTTCCTGTGGCACCAAGAGCTTTGTCTCCT...ATTGGCTGCTCTTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR CCA 90 bp | AATAGGGGATTTGTGTGTACGGAATTGTCAAATAGCAGAGTAGACGGGGACAGTCAGCCGCTGCTGCTCTaGAGGGGCCTGGAGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NRGFVCTELSNSRVDGDSQPLLL*RGLELW Trigger: CCAGAGCTCCAGGCCCCTCCAGAGCAGCAGCGGCTG...ACTGTCCCCGTCTACTCTGCTATTTGACAATTCCGTACACACAAATCCCCTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106046.8 |
||
| CDS-3UTR TCA 90 bp | GCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAAGAGCAGCCAATCAGGTAGCTGGCAGCTaGCATGACTTCGATCACATT | + |
|
Preference number: 4 (lower is better) Translates to: AAMWVLGIEPRSSGRAANQVAGS*HDFDHI Trigger: AATGTGATCGAAGTCATGTCAGCTGCCAGCTACCTG...ATTGGCTGCTCTTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR TCA 90 bp | CATGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGTCAGAACTTCAGGAGTTAGTCCCCTCCAGTCCTaGACTTGGACTTTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HAFNPSPWEAEAVRTSGVSPLQS*TWTFTV Trigger: GACAGTGAAAGTCCAAGTTCAGGACTGGAGGGGACT...AACTCCTGAAGTTCTGACTGCCTCTGCCTCCCAAGGGCTGGGATTAAAGGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR TCA 90 bp | GACAATTGTGAGCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAACTCGTGGCTTTCAGATaGAGCCTCCACCAGGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: DNCELPCGCWELNQGPLELVAFR*SLHQAK Trigger: CTTAGCCTGGTGGAGGCTTCATCTGAAAGCCACGAG...TTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGCTCACAATTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR GCA 90 bp | CATGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGTCAGAACTTCAGGAGTTAGACAAAGCTCTTGGTaGCACAGGAAGTCCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HAFNPSPWEAEAVRTSGVRQSSW*HRKSPP Trigger: TGGAGGGGACTTCCTGTGGCACCAAGAGCTTTGTCT...AACTCCTGAAGTTCTGACTGCCTCTGCCTCCCAAGGGCTGGGATTAAAGGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR GCA 90 bp | TGGCAGGGGAGAGACAGAGGTTCTGACAACATACTCTTGCCACCTCTTCAGAAGGTGTGGGAGCGGATGTaGCGTTTGAGGATGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WQGRDRGSDNILLPPLQKVWERM*RLRMPF Trigger: GAAAGGCATCCTCAAACGGCACATCCGCTCCCACAC...CTTCTGAAGAGGTGGCAAGAGTATGTTGTCAGAACCTCTGTCTCTCCCCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR CCA 90 bp | GACAATTGTGAGCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAAGGATGCCTTTCTGCTTaGCGGTGTAAGGGCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DNCELPCGCWELNQGPLEGCLSA*RCKGRR Trigger: CCTTCTGCCCTTACACCGCCAAGCAGAAAGGCATCC...TTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGCTCACAATTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR TCA 90 bp | TGCAGTACTAGAGATTGGACCCAGGGACTTCCTAATGACAGACAAGGAGCTGTATGTTCCTGTGGGCCTTaGAGATGCGCCCTTCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: CSTRDWTQGLPNDRQGAVCSCGP*RCALPR Trigger: TCGTGGAAGGGCGCATCTTCAAGGCCCACAGGAACA...TACAGCTCCTTGTCTGTCATTAGGAAGTCCCTGGGTCCAATCTCTAGTACTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR TCA 90 bp | CATGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGTCAGAACTTCAGGAGTTCAGGTAGCTGGCAGCTaGCATGACTTCGATCACATT | + |
|
Preference number: 4 (lower is better) Translates to: HAFNPSPWEAEAVRTSGVQVAGS*HDFDHI Trigger: AATGTGATCGAAGTCATGTCAGCTGCCAGCTACCTG...AACTCCTGAAGTTCTGACTGCCTCTGCCTCCCAAGGGCTGGGATTAAAGGCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR TCA 90 bp | GACAATTGTGAGCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAAAGTCCCCTCCAGTCCTaGACTTGGACTTTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DNCELPCGCWELNQGPLESPLQS*TWTFTV Trigger: GACAGTGAAAGTCCAAGTTCAGGACTGGAGGGGACT...TTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGCTCACAATTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR GCA 90 bp | AATAGGGGATTTGTGTGTACGGAATTGTCAAATAGCAGAGTAGACGGGGACAGTAGCGAAGCTGTGCTGTaGCGCCCGCTGTCCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: NRGFVCTELSNSRVDGDSSEAVL*RPLSWM Trigger: CATCCAGGACAGCGGGCGGCACAGCACAGCTTCGCT...ACTGTCCCCGTCTACTCTGCTATTTGACAATTCCGTACACACAAATCCCCTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR GCA 90 bp | GACAATTGTGAGCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAACCTTCTCCATCTTTCTaGAGATGTCCAGGGACGACC | + |
|
Preference number: 4 (lower is better) Translates to: DNCELPCGCWELNQGPLEPSPSF*RCPGTT Trigger: GGTCGTCCCTGGACATCTGCAGAAAGATGGAGAAGG...TTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGCTCACAATTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAGGGGAGAGACAGAGGTTCTGACAACATACTCTTGCCACCTCTTCAGAAGAGGAGACAAAGCTCTTaGTGCCACAGGAAGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WQGRDRGSDNILLPPLQKRRQSS*CHRKSP Trigger: AGGGGACTTCCTGTGGCACCAAGAGCTTTGTCTCCT...CTTCTGAAGAGGTGGCAAGAGTATGTTGTCAGAACCTCTGTCTCTCCCCTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR CCA 90 bp | GCAGATTCCCAGAAAATTAAATGTGGAGTTCATTTCAAGAAGCCTGGCAGGGGAGGCCGTTCGCCAGTGTaGGAGCGGATGTGCCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ADSQKIKCGVHFKKPGRGGRSPV*ERMCRL Trigger: CAAACGGCACATCCGCTCCCACACTGGCGAACGGCC...TCCCCTGCCAGGCTTCTTGAAATGAACTCCACATTTAATTTTCTGGGAATCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR CCA 90 bp | CATGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGTCAGAACTTCAGGAGTTGTGTCACTCTTCTCGTaGCTTTCAGATGAAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HAFNPSPWEAEAVRTSGVVSLFS*LSDEAS Trigger: GGAGGCTTCATCTGAAAGCCACGAGAAGAGTGACAC...AACTCCTGAAGTTCTGACTGCCTCTGCCTCCCAAGGGCTGGGATTAAAGGCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR CCA 90 bp | TGGTCTTTCCTGTCCTTTCATACTTTAGAGACACTCGACTTGCTTTGCTACAGTTGCTCTGGAGGGGCCTaGAGCTCTGGCACCGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: WSFLSFHTLETLDLLCYSCSGGA*SSGTGF Trigger: GAACCCGGTGCCAGAGCTCCAGGCCCCTCCAGAGCA...ACTGTAGCAAAGCAAGTCGAGTGTCTCTAAAGTATGAAAGGACAGGAAAGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106046.8 |
||
| CDS-3UTR TCA 90 bp | GCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAAGAGCAGCCAATACGTCTTACAGAAGTTaGCCACCTCATTCATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAMWVLGIEPRSSGRAANTSYRS*PPHSSA Trigger: TGCAGATGAATGAGGTGGTCAACTTCTGTAAGACGT...ATTGGCTGCTCTTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR TCA 90 bp | AATAGGGGATTTGTGTGTACGGAATTGTCAAATAGCAGAGTAGACGGGGACAGTCTTTCACTGTCTATCTaGTGGGCTGCAGCCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NRGFVCTELSNSRVDGDSLSLSI*WAAAAA Trigger: GGCGGCGGCTGCAGCCCATCAGATAGACAGTGAAAG...ACTGTCCCCGTCTACTCTGCTATTTGACAATTCCGTACACACAAATCCCCTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR GCA 90 bp | GTGTGCATATCCAGGTTGCATGTCTGGGAAATGACTAAGCAGCCTTTTGATTTTAGCGAAGCTGTGCTGTaGCGCCCGCTGTCCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VCISRLHVWEMTKQPFDFSEAVL*RPLSWM Trigger: CATCCAGGACAGCGGGCGGCACAGCACAGCTTCGCT...AAAATCAAAAGGCTGCTTAGTCATTTCCCAGACATGCAACCTGGATATGCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR GCA 90 bp | GCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAAGAGCAGCCAATAATCCAAGTCATCTTTaGTCTGGACAGCACCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: AAMWVLGIEPRSSGRAANNPSHL*SGQHHC Trigger: GCAATGGTGCTGTCCAGAGCAAAGATGACTTGGATT...ATTGGCTGCTCTTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR CCA 90 bp | TGGCAGGGGAGAGACAGAGGTTCTGACAACATACTCTTGCCACCTCTTCAGAAGGTGTCACTCTTCTCGTaGCTTTCAGATGAAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WQGRDRGSDNILLPPLQKVSLFS*LSDEAS Trigger: GGAGGCTTCATCTGAAAGCCACGAGAAGAGTGACAC...CTTCTGAAGAGGTGGCAAGAGTATGTTGTCAGAACCTCTGTCTCTCCCCTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGCATATCCAGGTTGCATGTCTGGGAAATGACTAAGCAGCCTTTTGATTTTGGCGCAGTAGGACTGTaGCTCCATTTCTCCGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VCISRLHVWEMTKQPFDFGAVGL*LHFSAS Trigger: GCTGGCGGAGAAATGGAGGCACAGTCCTACTGCGCC...AAAATCAAAAGGCTGCTTAGTCATTTCCCAGACATGCAACCTGGATATGCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106046.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAGGGGAGAGACAGAGGTTCTGACAACATACTCTTGCCACCTCTTCAGAAGACCAGCTCCAAGGGATaGCAGTCATCACAAGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: WQGRDRGSDNILLPPLQKTSSKG*QSSQDD Trigger: ATCATCTTGTGATGACTGCCATCCCTTGGAGCTGGT...CTTCTGAAGAGGTGGCAAGAGTATGTTGTCAGAACCTCTGTCTCTCCCCTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR TCA 90 bp | GCAGATTCCCAGAAAATTAAATGTGGAGTTCATTTCAAGAAGCCTGGCAGGGGAAGCGGATGTGCCGTTTaGGGATGCCTTTCTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ADSQKIKCGVHFKKPGRGSGCAV*GCLSAW Trigger: CCAAGCAGAAAGGCATCCTCAAACGGCACATCCGCT...TCCCCTGCCAGGCTTCTTGAAATGAACTCCACATTTAATTTTCTGGGAATCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR TCA 90 bp | AATAGGGGATTTGTGTGTACGGAATTGTCAAATAGCAGAGTAGACGGGGACAGTCTCGTGGCTTTCAGATaGAGCCTCCACCAGGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: NRGFVCTELSNSRVDGDSLVAFR*SLHQAK Trigger: CTTAGCCTGGTGGAGGCTTCATCTGAAAGCCACGAG...ACTGTCCCCGTCTACTCTGCTATTTGACAATTCCGTACACACAAATCCCCTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR GCA 90 bp | TGGTCTTTCCTGTCCTTTCATACTTTAGAGACACTCGACTTGCTTTGCTACAGTTCTGGACAGCACCATTaGGCAGGAGAGCCTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WSFLSFHTLETLDLLCYSSGQHH*AGEPPG Trigger: TCCTGGAGGCTCTCCTGCGCAATGGTGCTGTCCAGA...ACTGTAGCAAAGCAAGTCGAGTGTCTCTAAAGTATGAAAGGACAGGAAAGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR GCA 90 bp | TGGCAGGGGAGAGACAGAGGTTCTGACAACATACTCTTGCCACCTCTTCAGAAGAATCCAAGTCATCTTTaGTCTGGACAGCACCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: WQGRDRGSDNILLPPLQKNPSHL*SGQHHC Trigger: GCAATGGTGCTGTCCAGAGCAAAGATGACTTGGATT...CTTCTGAAGAGGTGGCAAGAGTATGTTGTCAGAACCTCTGTCTCTCCCCTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR CCA 90 bp | TGGTCTTTCCTGTCCTTTCATACTTTAGAGACACTCGACTTGCTTTGCTACAGTAAGCGCCGCAGTCCTTaGGACAGGTGGCTCGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WSFLSFHTLETLDLLCYSKRRSP*DRWLVK Trigger: CTTTACGAGCCACCTGTCCCAAGGACTGCGGCGCTT...ACTGTAGCAAAGCAAGTCGAGTGTCTCTAAAGTATGAAAGGACAGGAAAGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR TCA 90 bp | TGGTCTTTCCTGTCCTTTCATACTTTAGAGACACTCGACTTGCTTTGCTACAGTAGCGGATGTGCCGTTTaGGGATGCCTTTCTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WSFLSFHTLETLDLLCYSSGCAV*GCLSAW Trigger: CCAAGCAGAAAGGCATCCTCAAACGGCACATCCGCT...ACTGTAGCAAAGCAAGTCGAGTGTCTCTAAAGTATGAAAGGACAGGAAAGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR GCA 90 bp | AATAGGGGATTTGTGTGTACGGAATTGTCAAATAGCAGAGTAGACGGGGACAGTCAGAAGGGACACCTGTaGAGCTTGATAGGAACCACC | + |
|
Preference number: 4 (lower is better) Translates to: NRGFVCTELSNSRVDGDSQKGHL*SLIGTT Trigger: GGTGGTTCCTATCAAGCTGCACAGGTGTCCCTTCTG...ACTGTCCCCGTCTACTCTGCTATTTGACAATTCCGTACACACAAATCCCCTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR GCA 90 bp | TGGTCTTTCCTGTCCTTTCATACTTTAGAGACACTCGACTTGCTTTGCTACAGTGTGTGGGAGCGGATGTaGCGTTTGAGGATGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WSFLSFHTLETLDLLCYSVWERM*RLRMPF Trigger: GAAAGGCATCCTCAAACGGCACATCCGCTCCCACAC...ACTGTAGCAAAGCAAGTCGAGTGTCTCTAAAGTATGAAAGGACAGGAAAGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGCATATCCAGGTTGCATGTCTGGGAAATGACTAAGCAGCCTTTTGATTTTGGATGCCTTTCTGCTTaGCGGTGTAAGGGCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCISRLHVWEMTKQPFDFGCLSA*RCKGRR Trigger: CCTTCTGCCCTTACACCGCCAAGCAGAAAGGCATCC...AAAATCAAAAGGCTGCTTAGTCATTTCCCAGACATGCAACCTGGATATGCACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR TCA 90 bp | ATGACTAAGCAGCCTTTTGATTTTTGCCCAAACGACTTGCTTTATAATCTGAGACTTTCACTGTCTATCTaGTGGGCTGCAGCCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: MTKQPFDFCPNDLLYNLRLSLSI*WAAAAA Trigger: GGCGGCGGCTGCAGCCCATCAGATAGACAGTGAAAG...TCTCAGATTATAAAGCAAGTCGTTTGGGCAAAAATCAAAAGGCTGCTTAGTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGCATATCCAGGTTGCATGTCTGGGAAATGACTAAGCAGCCTTTTGATTTTCAGAAGGGACACCTGTaGAGCTTGATAGGAACCACC | + |
|
Preference number: 4 (lower is better) Translates to: VCISRLHVWEMTKQPFDFQKGHL*SLIGTT Trigger: GGTGGTTCCTATCAAGCTGCACAGGTGTCCCTTCTG...AAAATCAAAAGGCTGCTTAGTCATTTCCCAGACATGCAACCTGGATATGCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| 3UTR CAA 72 bp | TCTTTCCTGTCCTTTCATACTTTAGAGACACTCGACTaGCTTTGCTACAGTTGTGACCTGGCTGCAGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SFLSFHTLETLD*LCYSCDLAAEW Trigger: CCACTCTGCAGCCAGGTCACAACTGTAGCAAAGCAAGTCGAGTGTCTCTAAAGTATGAAAGGACAGGAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR TCA 90 bp | CACAGAACTCGACAAATGGTAGCTTTCACAGTAGAACAAGCCACAACACTTAAATGCGCCCTTCCACGATaGTGCTGCAGTCACAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HRTRQMVAFTVEQATTLKCALPR*CCSHRK Trigger: TTTTCTGTGACTGCAGCATCATCGTGGAAGGGCGCA...TTTAAGTGTTGTGGCTTGTTCTACTGTGAAAGCTACCATTTGTCGAGTTCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR GCA 90 bp | ATGCTTTTAAGAAAAGTCTGCAAGCTACCTTCTAGTGCACCATTCATCCATGGTAGACAAAGCTCTTGGTaGCACAGGAAGTCCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MLLRKVCKLPSSAPFIHGRQSSW*HRKSPP Trigger: TGGAGGGGACTTCCTGTGGCACCAAGAGCTTTGTCT...ACCATGGATGAATGGTGCACTAGAAGGTAGCTTGCAGACTTTTCTTAAAAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR GCA 90 bp | ATGACTAAGCAGCCTTTTGATTTTTGCCCAAACGACTTGCTTTATAATCTGAGATCTGGACAGCACCATTaGGCAGGAGAGCCTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MTKQPFDFCPNDLLYNLRSGQHH*AGEPPG Trigger: TCCTGGAGGCTCTCCTGCGCAATGGTGCTGTCCAGA...TCTCAGATTATAAAGCAAGTCGTTTGGGCAAAAATCAAAAGGCTGCTTAGTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR CCA 90 bp | TGGTCTTTCCTGTCCTTTCATACTTTAGAGACACTCGACTTGCTTTGCTACAGTAATAGGATGTTCCTGTaGGCCTTGAAGATGCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WSFLSFHTLETLDLLCYSNRMFL*ALKMRP Trigger: AGGGCGCATCTTCAAGGCCCACAGGAACATCCTATT...ACTGTAGCAAAGCAAGTCGAGTGTCTCTAAAGTATGAAAGGACAGGAAAGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR CCA 90 bp | AATAGGGGATTTGTGTGTACGGAATTGTCAAATAGCAGAGTAGACGGGGACAGTACCAGCTCCAAGGGATaGCAGTCATCACAAGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: NRGFVCTELSNSRVDGDSTSSKG*QSSQDD Trigger: ATCATCTTGTGATGACTGCCATCCCTTGGAGCTGGT...ACTGTCCCCGTCTACTCTGCTATTTGACAATTCCGTACACACAAATCCCCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR TCA 90 bp | GCAGATTCCCAGAAAATTAAATGTGGAGTTCATTTCAAGAAGCCTGGCAGGGGAACGTCTTACAGAAGTTaGCCACCTCATTCATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ADSQKIKCGVHFKKPGRGTSYRS*PPHSSA Trigger: TGCAGATGAATGAGGTGGTCAACTTCTGTAAGACGT...TCCCCTGCCAGGCTTCTTGAAATGAACTCCACATTTAATTTTCTGGGAATCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR CCA 90 bp | ATGCTTTTAAGAAAAGTCTGCAAGCTACCTTCTAGTGCACCATTCATCCATGGTCCCTTCTCCATCTACTaGGGAGGAGACAAAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MLLRKVCKLPSSAPFIHGPFSIY*GGDKAL Trigger: AAGAGCTTTGTCTCCTCCCCAGTAGATGGAGAAGGG...ACCATGGATGAATGGTGCACTAGAAGGTAGCTTGCAGACTTTTCTTAAAAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CCA 90 bp | CGCAGTAGGACTGTGCCTCCATTTCTCCGCCAGCCGCTGCTGCTCTaGAGGGGCCTGGAGCTCTGGCACCGGGTTCCAGCCACCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSRTVPPFLRQPLLL*RGLELWHRVPATSS Trigger: GCTGGAGGTGGCTGGAACCCGGTGCCAGAGCTCCAGGCCCCTCCAGAGCAGCAGCGGCTGGCGGAGAAATGGAGGCACAGTCCTACTGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106046.8 |
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| CDS GCA 90 bp | TGGACTTTCACTGTCTATCTGATGGGCTGCAGCCGCCGCCGCAGCTaGCGCTGCCGCCATTGCGGCAGCCACAGCGGCCTCCTTCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: WTFTVYLMGCSRRRS*RCRHCGSHSGLLLH Trigger: ATGGAGAAGGAGGCCGCTGTGGCTGCCGCAATGGCGGCAGCGGCAGCTGCGGCGGCGGCTGCAGCCCATCAGATAGACAGTGAAAGTCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CCA 90 bp | CCATTTCTCCGCCAGCCGCTGCTGCTCTGGAGGGGCCTGGAGCTCTaGCACCGGGTTCCAGCCACCTCCAGCGAGCTGAGAGTACTGACA | + |
|
Preference number: 5 (lower is better) Translates to: PFLRQPLLLWRGLEL*HRVPATSSELRVLT Trigger: TGTCAGTACTCTCAGCTCGCTGGAGGTGGCTGGAACCCGGTGCCAGAGCTCCAGGCCCCTCCAGAGCAGCAGCGGCTGGCGGAGAAATGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106046.8 |
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| CDS GCA 90 bp | CCGCTGCTCATTCAACTCCCCCAAGAGCTTGGCGCAGTAGGACTGTaGCTCCATTTCTCCGCCAGCCGCTGCTGCTCTGGAGGGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLLIQLPQELGAVGL*LHFSASRCCSGGAW Trigger: CCAGGCCCCTCCAGAGCAGCAGCGGCTGGCGGAGAAATGGAGGCACAGTCCTACTGCGCCAAGCTCTTGGGGGAGTTGAATGAGCAGCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106046.8 |
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| CDS-3UTR CAA 90 bp | CATGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGTCAGAACTTCAGGAGTTCTGCCGCTGCCGCCATaGCGGCAGCCACAGCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HAFNPSPWEAEAVRTSGVLPLPP*RQPQRP Trigger: AGGCCGCTGTGGCTGCCGCAATGGCGGCAGCGGCAG...AACTCCTGAAGTTCTGACTGCCTCTGCCTCCCAAGGGCTGGGATTAAAGGCATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR CAA 90 bp | TGGCAGGGGAGAGACAGAGGTTCTGACAACATACTCTTGCCACCTCTTCAGAAGCTGCCGCTGCCGCCATaGCGGCAGCCACAGCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: WQGRDRGSDNILLPPLQKLPLPP*RQPQRP Trigger: AGGCCGCTGTGGCTGCCGCAATGGCGGCAGCGGCAG...CTTCTGAAGAGGTGGCAAGAGTATGTTGTCAGAACCTCTGTCTCTCCCCTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS TCA 90 bp | TCCCAGAGTAGAGGAAGTCTAGAATGGTGGAGAAGGCGTCGGAGGTaGCGATGTCCAGCGAAGCTGTGCTGTGCCGCCCGCTGTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SQSRGSLEWWRRRRR*RCPAKLCCAARCPG Trigger: TCCAGGACAGCGGGCGGCACAGCACAGCTTCGCTGGACATCGTCACCTCCGACGCCTTCTCCACCATTCTAGACTTCCTCTACTCTGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS GCA 90 bp | TTACTGGGCAGGCCTTCCTCCATATGGGCCAGTGGGGCGGCATATTaGTGTAGCTGTTCGTCAGCCTCCACCTCCACCCTGGCAACATCG | + |
|
Preference number: 5 (lower is better) Translates to: LLGRPSSIWASGAAY*CSCSSASTSTLATS Trigger: CGATGTTGCCAGGGTGGAGGTGGAGGCTGACGAACAGCTACAGCAATATGCCGCCCCACTGGCCCATATGGAGGAAGGCCTGCCCAGTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CCA 90 bp | TCCACCAGGCTAAGGTTGACAGGCATCAGGTCGTCCTCTTCCTCCTaGGGGTCTGTGACACAGGTGCAACTGTCACACAGCCCGAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: STRLRLTGIRSSSSS*GSVTQVQLSHSPKR Trigger: GCGCTTCGGGCTGTGTGACAGTTGCACCTGTGTCACAGACCCCCAGGAGGAAGAGGACGACCTGATGCCTGTCAACCTTAGCCTGGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS TCA 90 bp | GGAGGAGACAAAGCTCTTGGTGCCACAGGAAGTCCCCTCCAGTCCTaGACTTGGACTTTCACTGTCTATCTGATGGGCTGCAGCCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GGDKALGATGSPLQS*TWTFTVYLMGCSRR Trigger: GCGGCGGCTGCAGCCCATCAGATAGACAGTGAAAGTCCAAGTTCAGGACTGGAGGGGACTTCCTGTGGCACCAAGAGCTTTGTCTCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CCA 90 bp | GCTTCACGTGGTAGCTGTTGTAGGTCAGATCCAAGGCCTGGTTACTaGGCAGGCCTTCCTCCATATGGGCCAGTGGGGCGGCATATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ASRGSCCRSDPRPGY*AGLPPYGPVGRHIA Trigger: AGCAATATGCCGCCCCACTGGCCCATATGGAGGAAGGCCTGCCCAGTAACCAGGCCTTGGATCTGACCTACAACAGCTACCACGTGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CCA 90 bp | GGACAGGTGGCTCGTAAAGGTTCGTCGACAGCCTTTGCAGATAATTaGACGGCTGGATCTGTGGACGCTCAGGGCGTGACTCCGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GQVARKGSSTAFADN*TAGSVDAQGVTPKV Trigger: CACCTTCGGAGTCACGCCCTGAGCGTCCACAGATCCAGCCGTCCAATTATCTGCAAAGGCTGTCGACGAACCTTTACGAGCCACCTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CCA 90 bp | GTGCAACTGTCACACAGCCCGAAGCGCCGCAGTCCTTGGGACAGGTaGCTCGTAAAGGTTCGTCGACAGCCTTTGCAGATAATTGGACGG | + |
|
Preference number: 5 (lower is better) Translates to: VQLSHSPKRRSPWDR*LVKVRRQPLQIIGR Trigger: CCGTCCAATTATCTGCAAAGGCTGTCGACGAACCTTTACGAGCCACCTGTCCCAAGGACTGCGGCGCTTCGGGCTGTGTGACAGTTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR CAA 90 bp | GCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAAGAGCAGCCAATGGCCGAATGTGTGGCTaGTCGTCAGAATCCTCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: AAMWVLGIEPRSSGRAANGRMCG*SSESSA Trigger: CGCGGAGGATTCTGACGACAAGCCACACATTCGGCC...ATTGGCTGCTCTTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR CAA 90 bp | TGTGAGCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAAGAGCAGGGCCGAATGTGTGGCTaGTCGTCAGAATCCTCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: CELPCGCWELNQGPLEEQGRMCG*SSESSA Trigger: CGCGGAGGATTCTGACGACAAGCCACACATTCGGCC...CTGCTCTTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGCTCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR CAA 90 bp | GCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAAGAGCAGCCAATATGTTCCTGTGGGCCTaGAAGATGCGCCCTTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: AAMWVLGIEPRSSGRAANMFLWA*KMRPST Trigger: CGTGGAAGGGCGCATCTTCAAGGCCCACAGGAACAT...ATTGGCTGCTCTTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR CAA 90 bp | GACAATTGTGAGCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAACTCTGGACAGCACCATaGCGCAGGAGAGCCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DNCELPCGCWELNQGPLELWTAP*RRRASR Trigger: CCTGGAGGCTCTCCTGCGCAATGGTGCTGTCCAGAG...TTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGCTCACAATTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CCA 90 bp | CGTCCTCTCTATACCAGTCGTTCTGAACGTCCATCACGGAACTCATaGCCACTCCTGGACCTTCCAGTCTTCCCTCCAAGCCACGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RPLYTSRSERPSRNS*PLLDLPVFPPSHEK Trigger: CTTCTCGTGGCTTGGAGGGAAGACTGGAAGGTCCAGGAGTGGCCATGAGTTCCGTGATGGACGTTCAGAACGACTGGTATAGAGAGGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR CAA 90 bp | CATGCCTTTAATCCCAGCCCTTGGGAGGCAGAGGCAGTCAGAACTTCAGGAGTTGGACACCTGTGCAGCTaGATAGGAACCACCAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: HAFNPSPWEAEAVRTSGVGHLCS*IGTTST Trigger: CGTGCTGGTGGTTCCTATCAAGCTGCACAGGTGTCC...AACTCCTGAAGTTCTGACTGCCTCTGCCTCCCAAGGGCTGGGATTAAAGGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS GCA 90 bp | GTCTTCCCTCCAAGCCACGAGAAGAGTGACAATCCAAGTCATCTTTaGTCTGGACAGCACCATTGCGCAGGAGAGCCTCCAGGAACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VFPPSHEKSDNPSHL*SGQHHCAGEPPGTA Trigger: AGCAGTTCCTGGAGGCTCTCCTGCGCAATGGTGCTGTCCAGAGCAAAGATGACTTGGATTGTCACTCTTCTCGTGGCTTGGAGGGAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS GCA 90 bp | GAAGGGACACCTGTGCAGCTTGATAGGAACCACCAGCACGTCACCTaGGTCCTCTCTATACCAGTCGTTCTGAACGTCCATCACGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: EGTPVQLDRNHQHVT*VLSIPVVLNVHHGT Trigger: AGTTCCGTGATGGACGTTCAGAACGACTGGTATAGAGAGGACGCAGGTGACGTGCTGGTGGTTCCTATCAAGCTGCACAGGTGTCCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CCA 90 bp | ATACCAGTCGTTCTGAACGTCCATCACGGAACTCATGGCCACTCCTaGACCTTCCAGTCTTCCCTCCAAGCCACGAGAAGAGTGACAATC | + |
|
Preference number: 5 (lower is better) Translates to: IPVVLNVHHGTHGHS*TFQSSLQATRRVTI Trigger: GATTGTCACTCTTCTCGTGGCTTGGAGGGAAGACTGGAAGGTCCAGGAGTGGCCATGAGTTCCGTGATGGACGTTCAGAACGACTGGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS GCA 90 bp | GAGAAGAGTGACAATCCAAGTCATCTTTGCTCTGGACAGCACCATTaGGCAGGAGAGCCTCCAGGAACTGCTTCACGTGGTAGCTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: EKSDNPSHLCSGQHH*AGEPPGTASRGSCC Trigger: ACAACAGCTACCACGTGAAGCAGTTCCTGGAGGCTCTCCTGCGCAATGGTGCTGTCCAGAGCAAAGATGACTTGGATTGTCACTCTTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR CAA 90 bp | TGCAGTACTAGAGATTGGACCCAGGGACTTCCTAATGACAGACAAGGAGCTGTAATGTTCCTGTGGGCCTaGAAGATGCGCCCTTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: CSTRDWTQGLPNDRQGAVMFLWA*KMRPST Trigger: CGTGGAAGGGCGCATCTTCAAGGCCCACAGGAACAT...TACAGCTCCTTGTCTGTCATTAGGAAGTCCCTGGGTCCAATCTCTAGTACTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR CAA 90 bp | TGTGAGCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAAGAGCAGCAATCCAAGTCATCTTaGCTCTGGACAGCACCATTG | + |
|
Preference number: 5 (lower is better) Translates to: CELPCGCWELNQGPLEEQQSKSS*LWTAPL Trigger: CAATGGTGCTGTCCAGAGCAAAGATGACTTGGATTG...CTGCTCTTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGCTCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR CAA 90 bp | GCTGCCATGTGGGTGCTGGGAATTGAACCAAGGTCCTCTGGAAGAGCAGCCAATCAATCCAAGTCATCTTaGCTCTGGACAGCACCATTG | + |
|
Preference number: 5 (lower is better) Translates to: AAMWVLGIEPRSSGRAANQSKSS*LWTAPL Trigger: CAATGGTGCTGTCCAGAGCAAAGATGACTTGGATTG...ATTGGCTGCTCTTCCAGAGGACCTTGGTTCAATTCCCAGCACCCACATGGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR CAA 90 bp | TGCAGTACTAGAGATTGGACCCAGGGACTTCCTAATGACAGACAAGGAGCTGTAGGACACCTGTGCAGCTaGATAGGAACCACCAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: CSTRDWTQGLPNDRQGAVGHLCS*IGTTST Trigger: CGTGCTGGTGGTTCCTATCAAGCTGCACAGGTGTCC...TACAGCTCCTTGTCTGTCATTAGGAAGTCCCTGGGTCCAATCTCTAGTACTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CCA 90 bp | AATCCTCCGCGGTTGGGTCATTCTCCTCACCAGACTCTATGTAGATaGGCCAGTCATCTGTGTCACTCTTCTCGTGGCTTTCAGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NPPRLGHSPHQTLCR*ASHLCHSSRGFQMK Trigger: CTTCATCTGAAAGCCACGAGAAGAGTGACACAGATGACTGGCCCATCTACATAGAGTCTGGTGAGGAGAATGACCCAACCGCGGAGGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR CAA 90 bp | TGGTCTTTCCTGTCCTTTCATACTTTAGAGACACTCGACTTGCTTTGCTACAGTCTCTGGACAGCACCATaGCGCAGGAGAGCCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WSFLSFHTLETLDLLCYSLWTAP*RRRASR Trigger: CCTGGAGGCTCTCCTGCGCAATGGTGCTGTCCAGAG...ACTGTAGCAAAGCAAGTCGAGTGTCTCTAAAGTATGAAAGGACAGGAAAGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR CAA 90 bp | AATAGGGGATTTGTGTGTACGGAATTGTCAAATAGCAGAGTAGACGGGGACAGTGAAGCGCCGCAGTCCTaGGGACAGGTGGCTCGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: NRGFVCTELSNSRVDGDSEAPQS*GQVARK Trigger: TTTACGAGCCACCTGTCCCAAGGACTGCGGCGCTTC...ACTGTCCCCGTCTACTCTGCTATTTGACAATTCCGTACACACAAATCCCCTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR CAA 90 bp | GCAGATTCCCAGAAAATTAAATGTGGAGTTCATTTCAAGAAGCCTGGCAGGGGAACAACACAAAGGTCATaGTCGGAGACCCCAGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ADSQKIKCGVHFKKPGRGTTQRS*SETPEP Trigger: GGGCTCTGGGGTCTCCGACAATGACCTTTGTGTTGT...TCCCCTGCCAGGCTTCTTGAAATGAACTCCACATTTAATTTTCTGGGAATCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR CAA 90 bp | AATAGGGGATTTGTGTGTACGGAATTGTCAAATAGCAGAGTAGACGGGGACAGTACAACACAAAGGTCATaGTCGGAGACCCCAGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: NRGFVCTELSNSRVDGDSTTQRS*SETPEP Trigger: GGGCTCTGGGGTCTCCGACAATGACCTTTGTGTTGT...ACTGTCCCCGTCTACTCTGCTATTTGACAATTCCGTACACACAAATCCCCTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS-3UTR CAA 90 bp | TGCAGTACTAGAGATTGGACCCAGGGACTTCCTAATGACAGACAAGGAGCTGTACCTCCAGTCCTGAACTaGGACTTTCACTGTCTATCT | + |
|
Preference number: 5 (lower is better) Translates to: CSTRDWTQGLPNDRQGAVPPVLN*DFHCLS Trigger: AGATAGACAGTGAAAGTCCAAGTTCAGGACTGGAGG...TACAGCTCCTTGTCTGTCATTAGGAAGTCCCTGGGTCCAATCTCTAGTACTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR CAA 90 bp | TGGTCTTTCCTGTCCTTTCATACTTTAGAGACACTCGACTTGCTTTGCTACAGTGAGCGGATGTGCCGTTaGAGGATGCCTTTCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WSFLSFHTLETLDLLCYSERMCR*RMPFCL Trigger: CAAGCAGAAAGGCATCCTCAAACGGCACATCCGCTC...ACTGTAGCAAAGCAAGTCGAGTGTCTCTAAAGTATGAAAGGACAGGAAAGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR CAA 90 bp | CACAGAACTCGACAAATGGTAGCTTTCACAGTAGAACAAGCCACAACACTTAAAGAGCGGATGTGCCGTTaGAGGATGCCTTTCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HRTRQMVAFTVEQATTLKERMCR*RMPFCL Trigger: CAAGCAGAAAGGCATCCTCAAACGGCACATCCGCTC...TTTAAGTGTTGTGGCTTGTTCTACTGTGAAAGCTACCATTTGTCGAGTTCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS-3UTR CAA 90 bp | ATGACTAAGCAGCCTTTTGATTTTTGCCCAAACGACTTGCTTTATAATCTGAGAGAAGCGCCGCAGTCCTaGGGACAGGTGGCTCGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: MTKQPFDFCPNDLLYNLREAPQS*GQVARK Trigger: TTTACGAGCCACCTGTCCCAAGGACTGCGGCGCTTC...TCTCAGATTATAAAGCAAGTCGTTTGGGCAAAAATCAAAAGGCTGCTTAGTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
||
| CDS CCA 72 bp | CGCCAGCCGCTGCTGCTCTGGAGGGGCCTGGAGCTCTaGCACCGGGTTCCAGCCACCTCCAGCGAGCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RQPLLLWRGLEL*HRVPATSSELR Trigger: TCTCAGCTCGCTGGAGGTGGCTGGAACCCGGTGCCAGAGCTCCAGGCCCCTCCAGAGCAGCAGCGGCTGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106046.8 |
||
| CDS CCA 72 bp | CATTTCTCCGCCAGCCGCTGCTGCTCTGGAGGGGCCTaGAGCTCTGGCACCGGGTTCCAGCCACCTCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: HFSASRCCSGGA*SSGTGFQPPPA Trigger: CGCTGGAGGTGGCTGGAACCCGGTGCCAGAGCTCCAGGCCCCTCCAGAGCAGCAGCGGCTGGCGGAGAAATG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106046.8 |
||
| CDS GCA 72 bp | GCAGTAGGACTGTGCCTCCATTTCTCCGCCAGCCGCTaGTGCTCTGGAGGGGCCTGGAGCTCTGGCACCGGG | + |
|
Preference number: 6 (lower is better) Translates to: AVGLCLHFSASR*CSGGAWSSGTG Trigger: CCCGGTGCCAGAGCTCCAGGCCCCTCCAGAGCAGCAGCGGCTGGCGGAGAAATGGAGGCACAGTCCTACTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106046.8 |
||
| CDS GCA 72 bp | GTAGGACTGTGCCTCCATTTCTCCGCCAGCCGCTGCTaGTCTGGAGGGGCCTGGAGCTCTGGCACCGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: VGLCLHFSASRC*SGGAWSSGTGF Trigger: GAACCCGGTGCCAGAGCTCCAGGCCCCTCCAGAGCAGCAGCGGCTGGCGGAGAAATGGAGGCACAGTCCTAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106046.8 |
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| CDS CAA 72 bp | GGTGCAACTGTCACACAGCCCGAAGCGCCGCAGTCCTaGGGACAGGTGGCTCGTAAAGGTTCGTCGACAGCC | + |
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Preference number: 6 (lower is better) Translates to: GATVTQPEAPQS*GQVARKGSSTA Trigger: GGCTGTCGACGAACCTTTACGAGCCACCTGTCCCAAGGACTGCGGCGCTTCGGGCTGTGTGACAGTTGCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS GCA 72 bp | AGGCCTTCCTCCATATGGGCCAGTGGGGCGGCATATTaGTGTAGCTGTTCGTCAGCCTCCACCTCCACCCTG | + |
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Preference number: 6 (lower is better) Translates to: RPSSIWASGAAY*CSCSSASTSTL Trigger: CAGGGTGGAGGTGGAGGCTGACGAACAGCTACAGCAATATGCCGCCCCACTGGCCCATATGGAGGAAGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CCA 72 bp | GGTAGCTGTTGTAGGTCAGATCCAAGGCCTGGTTACTaGGCAGGCCTTCCTCCATATGGGCCAGTGGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: GSCCRSDPRPGY*AGLPPYGPVGR Trigger: CCGCCCCACTGGCCCATATGGAGGAAGGCCTGCCCAGTAACCAGGCCTTGGATCTGACCTACAACAGCTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS TCA 72 bp | ATAATTGGACGGCTGGATCTGTGGACGCTCAGGGCGTaGCTCCGAAGGTGCTCCTGCCGGGTGAACCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: IIGRLDLWTLRA*LRRCSCRVNLL Trigger: CAAGAGGTTCACCCGGCAGGAGCACCTTCGGAGTCACGCCCTGAGCGTCCACAGATCCAGCCGTCCAATTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS GCA 72 bp | ATTCAACTCCCCCAAGAGCTTGGCGCAGTAGGACTGTaGCTCCATTTCTCCGCCAGCCGCTGCTGCTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: IQLPQELGAVGL*LHFSASRCCSG Trigger: TCCAGAGCAGCAGCGGCTGGCGGAGAAATGGAGGCACAGTCCTACTGCGCCAAGCTCTTGGGGGAGTTGAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106046.8 |
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| CDS CAA 90 bp | TGTGACACAGGTGCAACTGTCACACAGCCCGAAGCGCCGCAGTCCTaGGGACAGGTGGCTCGTAAAGGTTCGTCGACAGCCTTTGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: CDTGATVTQPEAPQS*GQVARKGSSTAFAD Trigger: ATCTGCAAAGGCTGTCGACGAACCTTTACGAGCCACCTGTCCCAAGGACTGCGGCGCTTCGGGCTGTGTGACAGTTGCACCTGTGTCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CCA 72 bp | ACAACACAAAGGTCATTGTCGGAGACCCCAGAGCCCTaGCTGTCTTTCGCCACCAGCTCCAAGGGATGGCAG | + |
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Preference number: 6 (lower is better) Translates to: TTQRSLSETPEP*LSFATSSKGWQ Trigger: CTGCCATCCCTTGGAGCTGGTGGCGAAAGACAGCCAGGGCTCTGGGGTCTCCGACAATGACCTTTGTGTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CCA 72 bp | TCACACAGCCCGAAGCGCCGCAGTCCTTGGGACAGGTaGCTCGTAAAGGTTCGTCGACAGCCTTTGCAGATA | + |
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Preference number: 6 (lower is better) Translates to: SHSPKRRSPWDR*LVKVRRQPLQI Trigger: TATCTGCAAAGGCTGTCGACGAACCTTTACGAGCCACCTGTCCCAAGGACTGCGGCGCTTCGGGCTGTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CAA 72 bp | TCGTGGCTTTCAGATGAAGCCTCCACCAGGCTAAGGTaGACAGGCATCAGGTCGTCCTCTTCCTCCTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: SWLSDEASTRLR*TGIRSSSSSWG Trigger: CCCCCAGGAGGAAGAGGACGACCTGATGCCTGTCAACCTTAGCCTGGTGGAGGCTTCATCTGAAAGCCACGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CAA 90 bp | AATTCCACCTTAGGTTCAACCCGTCTGGGCACAACACAAAGGTCATaGTCGGAGACCCCAGAGCCCTGGCTGTCTTTCGCCACCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: NSTLGSTRLGTTQRS*SETPEPWLSFATSS Trigger: GGAGCTGGTGGCGAAAGACAGCCAGGGCTCTGGGGTCTCCGACAATGACCTTTGTGTTGTGCCCAGACGGGTTGAACCTAAGGTGGAATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CAA 72 bp | TTAGGTTCAACCCGTCTGGGCACAACACAAAGGTCATaGTCGGAGACCCCAGAGCCCTGGCTGTCTTTCGCC | + |
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Preference number: 6 (lower is better) Translates to: LGSTRLGTTQRS*SETPEPWLSFA Trigger: GGCGAAAGACAGCCAGGGCTCTGGGGTCTCCGACAATGACCTTTGTGTTGTGCCCAGACGGGTTGAACCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CAA 90 bp | TCACTCTTCTCGTGGCTTTCAGATGAAGCCTCCACCAGGCTAAGGTaGACAGGCATCAGGTCGTCCTCTTCCTCCTGGGGGTCTGTGACA | + |
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Preference number: 6 (lower is better) Translates to: SLFSWLSDEASTRLR*TGIRSSSSSWGSVT Trigger: TGTCACAGACCCCCAGGAGGAAGAGGACGACCTGATGCCTGTCAACCTTAGCCTGGTGGAGGCTTCATCTGAAAGCCACGAGAAGAGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CAA 90 bp | TACGTAAGTGTCTCTGGGGCTGGTAAGTTGGGCCGAATGTGTGGCTaGTCGTCAGAATCCTCCGCGGTTGGGTCATTCTCCTCACCAGAC | + |
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Preference number: 6 (lower is better) Translates to: YVSVSGAGKLGRMCG*SSESSAVGSFSSPD Trigger: GTCTGGTGAGGAGAATGACCCAACCGCGGAGGATTCTGACGACAAGCCACACATTCGGCCCAACTTACCAGCCCCAGAGACACTTACGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS TCA 72 bp | AGCACGTCACCTGCGTCCTCTCTATACCAGTCGTTCTaGACGTCCATCACGGAACTCATGGCCACTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: STSPASSLYQSF*TSITELMATPG Trigger: TCCAGGAGTGGCCATGAGTTCCGTGATGGACGTTCAGAACGACTGGTATAGAGAGGACGCAGGTGACGTGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CCA 72 bp | GTTCTGAACGTCCATCACGGAACTCATGGCCACTCCTaGACCTTCCAGTCTTCCCTCCAAGCCACGAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: VLNVHHGTHGHS*TFQSSLQATRR Trigger: TCTTCTCGTGGCTTGGAGGGAAGACTGGAAGGTCCAGGAGTGGCCATGAGTTCCGTGATGGACGTTCAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CCA 72 bp | GCTCGTAAAGGTTCGTCGACAGCCTTTGCAGATAATTaGACGGCTGGATCTGTGGACGCTCAGGGCGTGACT | + |
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Preference number: 6 (lower is better) Translates to: ARKGSSTAFADN*TAGSVDAQGVT Trigger: AGTCACGCCCTGAGCGTCCACAGATCCAGCCGTCCAATTATCTGCAAAGGCTGTCGACGAACCTTTACGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CAA 72 bp | TCTTGGTGCCACAGGAAGTCCCCTCCAGTCCTGAACTaGGACTTTCACTGTCTATCTGATGGGCTGCAGCCG | + |
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Preference number: 6 (lower is better) Translates to: SWCHRKSPPVLN*DFHCLSDGLQP Trigger: CGGCTGCAGCCCATCAGATAGACAGTGAAAGTCCAAGTTCAGGACTGGAGGGGACTTCCTGTGGCACCAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CAA 72 bp | CTCCCTTCTCCATCTACTGGGGAGGAGACAAAGCTCTaGGTGCCACAGGAAGTCCCCTCCAGTCCTGAACTT | + |
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Preference number: 6 (lower is better) Translates to: LPSPSTGEETKL*VPQEVPSSPEL Trigger: AAGTTCAGGACTGGAGGGGACTTCCTGTGGCACCAAGAGCTTTGTCTCCTCCCCAGTAGATGGAGAAGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CAA 72 bp | TGGGACAGGTGGCTCGTAAAGGTTCGTCGACAGCCTTaGCAGATAATTGGACGGCTGGATCTGTGGACGCTC | + |
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Preference number: 6 (lower is better) Translates to: WDRWLVKVRRQP*QIIGRLDLWTL Trigger: GAGCGTCCACAGATCCAGCCGTCCAATTATCTGCAAAGGCTGTCGACGAACCTTTACGAGCCACCTGTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS GCA 72 bp | GACAATCCAAGTCATCTTTGCTCTGGACAGCACCATTaGGCAGGAGAGCCTCCAGGAACTGCTTCACGTGGT | + |
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Preference number: 6 (lower is better) Translates to: DNPSHLCSGQHH*AGEPPGTASRG Trigger: ACCACGTGAAGCAGTTCCTGGAGGCTCTCCTGCGCAATGGTGCTGTCCAGAGCAAAGATGACTTGGATTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS GCA 72 bp | CCAAGCCACGAGAAGAGTGACAATCCAAGTCATCTTTaGTCTGGACAGCACCATTGCGCAGGAGAGCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PSHEKSDNPSHL*SGQHHCAGEPP Trigger: TGGAGGCTCTCCTGCGCAATGGTGCTGTCCAGAGCAAAGATGACTTGGATTGTCACTCTTCTCGTGGCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS GCA 72 bp | CCTGTGCAGCTTGATAGGAACCACCAGCACGTCACCTaGGTCCTCTCTATACCAGTCGTTCTGAACGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: PVQLDRNHQHVT*VLSIPVVLNVH Trigger: ATGGACGTTCAGAACGACTGGTATAGAGAGGACGCAGGTGACGTGCTGGTGGTTCCTATCAAGCTGCACAGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CCA 72 bp | TATACCAGTCGTTCTGAACGTCCATCACGGAACTCATaGCCACTCCTGGACCTTCCAGTCTTCCCTCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: YTSRSERPSRNS*PLLDLPVFPPS Trigger: GCTTGGAGGGAAGACTGGAAGGTCCAGGAGTGGCCATGAGTTCCGTGATGGACGTTCAGAACGACTGGTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CAA 72 bp | GCCGAATGTGTGGCTTGTCGTCAGAATCCTCCGCGGTaGGGTCATTCTCCTCACCAGACTCTATGTAGATGG | + |
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Preference number: 6 (lower is better) Translates to: AECVACRQNPPR*GHSPHQTLCRW Trigger: CCATCTACATAGAGTCTGGTGAGGAGAATGACCCAACCGCGGAGGATTCTGACGACAAGCCACACATTCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS TCA 72 bp | AAAGCTCTTGGTGCCACAGGAAGTCCCCTCCAGTCCTaGACTTGGACTTTCACTGTCTATCTGATGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: KALGATGSPLQS*TWTFTVYLMGC Trigger: GCAGCCCATCAGATAGACAGTGAAAGTCCAAGTTCAGGACTGGAGGGGACTTCCTGTGGCACCAAGAGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS TCA 72 bp | CCAGTCATCTGTGTCACTCTTCTCGTGGCTTTCAGATaGAGCCTCCACCAGGCTAAGGTTGACAGGCATCAG | + |
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Preference number: 6 (lower is better) Translates to: PVICVTLLVAFR*SLHQAKVDRHQ Trigger: CTGATGCCTGTCAACCTTAGCCTGGTGGAGGCTTCATCTGAAAGCCACGAGAAGAGTGACACAGATGACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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| CDS CCA 72 bp | GAGCCCTGGCTGTCTTTCGCCACCAGCTCCAAGGGATaGCAGTCATCACAAGATGATATTGTACAGTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: EPWLSFATSSKG*QSSQDDIVQSR Trigger: TCTAGACTGTACAATATCATCTTGTGATGACTGCCATCCCTTGGAGCTGGTGGCGAAAGACAGCCAGGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053042.6 ENSMUST00000106046.8 |
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