Pregenerated sensors for ZBTB8A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028807Ensembl transcript IDs: ENSMUST00000030610.3
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAACAGCAAGCAAGGTCTTCCCAGTGCAGCAACAACGTTCAGAATaGATACGGTGGCCTTTTCAGAAAGCATGCAAGTTACATCAGGTT | + |
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Preference number: 1 (lower is better) Translates to: PTASKVFPVQQQRSE*IRWPFQKACKLHQV Trigger: AACCTGATGTAACTTGCATGCTTTCTGAAAAGGCCACCGTATCCATTCTGAACGTTGTTGCTGCACTGGGAAGACCTTGCTTGCTGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| 3UTR GCA 90 bp | GTAATTGATCATCTGTCATGCCAACAGCAAGCAAGGTCTTCCCAGTaGAGCAACAACGTTCAGAATGGATACGGTGGCCTTTTCAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: VIDHLSCQQQARSSQ*SNNVQNGYGGLFRK Trigger: CTTTCTGAAAAGGCCACCGTATCCATTCTGAACGTTGTTGCTGCACTGGGAAGACCTTGCTTGCTGTTGGCATGACAGATGATCAATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| 3UTR CCA 90 bp | AGCAAGGTCTTCCCAGTGCAGCAACAACGTTCAGAATGGATACGGTaGCCTTTTCAGAAAGCATGCAAGTTACATCAGGTTGCTTCTAAG | + |
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Preference number: 1 (lower is better) Translates to: SKVFPVQQQRSEWIR*PFQKACKLHQVASK Trigger: CTTAGAAGCAACCTGATGTAACTTGCATGCTTTCTGAAAAGGCCACCGTATCCATTCTGAACGTTGTTGCTGCACTGGGAAGACCTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| 3UTR GCA 90 bp | CAGCAACAACGTTCAGAATGGATACGGTGGCCTTTTCAGAAAGCATaGAAGTTACATCAGGTTGCTTCTAAGTCAGTAGGAGAAACCCAT | + |
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Preference number: 1 (lower is better) Translates to: QQQRSEWIRWPFQKA*KLHQVASKSVGETH Trigger: ATGGGTTTCTCCTACTGACTTAGAAGCAACCTGATGTAACTTGCATGCTTTCTGAAAAGGCCACCGTATCCATTCTGAACGTTGTTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| 3UTR-3UTR GCA 90 bp | GGTCTTCCCAGTGCAGCAACAACGTTCAGAATGGATACGGTGGCCTTTTCAGAACCATTCACCGGGCTCTaGCCATGGAGAGACAGACAC | + |
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Preference number: 2 (lower is better) Translates to: GLPSAATTFRMDTVAFSEPFTGL*PWRDRH Trigger: GTGTCTGTCTCTCCATGGGCAGAGCCCGGTGAATGG...TTCTGAAAAGGCCACCGTATCCATTCTGAACGTTGTTGCTGCACTGGGAAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| 3UTR-3UTR CCA 90 bp | CCCAGTGCAGCAACAACGTTCAGAATGGATACGGTGGCCTTTTCAGAAAGCATGACCGGGCTCTGCCCATaGAGAGACAGACACAGCATG | + |
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Preference number: 2 (lower is better) Translates to: PSAATTFRMDTVAFSESMTGLCP*RDRHSM Trigger: CATGCTGTGTCTGTCTCTCCATGGGCAGAGCCCGGT...CATGCTTTCTGAAAAGGCCACCGTATCCATTCTGAACGTTGTTGCTGCACTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| 3UTR-3UTR GCA 90 bp | GACTTGGGAGGCAGAGGCAGGTGGATTTCTGAATTTGAGGCCAGCCTGGTCTACCCTTTTCAGAAAGCATaGAAGTTACATCAGGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: DLGGRGRWISEFEASLVYPFQKA*KLHQVA Trigger: AGCAACCTGATGTAACTTGCATGCTTTCTGAAAAGG...GTAGACCAGGCTGGCCTCAAATTCAGAAATCCACCTGCCTCTGCCTCCCAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| 3UTR CCA 72 bp | CATGAGGTGGTGGCACACGCCTTTAATCCCAGGACTTaGGAGGCAGAGGCAGGTGGATTTCTGAATTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: HEVVAHAFNPRT*EAEAGGFLNLR Trigger: CCTCAAATTCAGAAATCCACCTGCCTCTGCCTCCCAAGTCCTGGGATTAAAGGCGTGTGCCACCACCTCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| 3UTR GCA 72 bp | CATCTGTCATGCCAACAGCAAGCAAGGTCTTCCCAGTaGAGCAACAACGTTCAGAATGGATACGGTGGCCTT | + |
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Preference number: 3 (lower is better) Translates to: HLSCQQQARSSQ*SNNVQNGYGGL Trigger: AAGGCCACCGTATCCATTCTGAACGTTGTTGCTGCACTGGGAAGACCTTGCTTGCTGTTGGCATGACAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| 3UTR CCA 72 bp | AGCAAGGTCTTCCCAGTGCAGCAACAACGTTCAGAATaGATACGGTGGCCTTTTCAGAAAGCATGCAAGTTA | + |
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Preference number: 3 (lower is better) Translates to: SKVFPVQQQRSE*IRWPFQKACKL Trigger: TAACTTGCATGCTTTCTGAAAAGGCCACCGTATCCATTCTGAACGTTGTTGCTGCACTGGGAAGACCTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| 3UTR CCA 72 bp | TTTCCAATATTTAAAGAAAATGGTGCCATGAGGTGGTaGCACACGCCTTTAATCCCAGGACTTGGGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: FPIFKENGAMRW*HTPLIPGLGRQ Trigger: CTGCCTCCCAAGTCCTGGGATTAAAGGCGTGTGCCACCACCTCATGGCACCATTTTCTTTAAATATTGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| 3UTR CCA 72 bp | TTCCCAGTGCAGCAACAACGTTCAGAATGGATACGGTaGCCTTTTCAGAAAGCATGCAAGTTACATCAGGTT | + |
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Preference number: 3 (lower is better) Translates to: FPVQQQRSEWIR*PFQKACKLHQV Trigger: AACCTGATGTAACTTGCATGCTTTCTGAAAAGGCCACCGTATCCATTCTGAACGTTGTTGCTGCACTGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| 3UTR TCA 72 bp | AAAGGAAATGGTATCTGTAATAACAGAAAGGGTAATTaGTCATCTGTCATGCCAACAGCAAGCAAGGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: KGNGICNNRKGN*SSVMPTASKVF Trigger: GAAGACCTTGCTTGCTGTTGGCATGACAGATGATCAATTACCCTTTCTGTTATTACAGATACCATTTCCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR GCA 90 bp | GACTTGGGAGGCAGAGGCAGGTGGATTTCTGAATTTGAGGCCAGCCTGGTCTACCATCGGCCGGGGCTGTaGGGTGTTGCTCAGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: DLGGRGRWISEFEASLVYHRPGL*GVAQPP Trigger: TGGAGGCTGAGCAACACCGCACAGCCCCGGCCGATG...GTAGACCAGGCTGGCCTCAAATTCAGAAATCCACCTGCCTCTGCCTCCCAAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR GCA 90 bp | TCCCAGGACTTGGGAGGCAGAGGCAGGTGGATTTCTGAATTTGAGGCCAGCCTGGTGGCGCTTGAGGTCTaGCTTCCGCTTCACCACATG | + |
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Preference number: 4 (lower is better) Translates to: SQDLGGRGRWISEFEASLVALEV*LPLHHM Trigger: CATGTGGTGAAGCGGAAGGCAGACCTCAAGCGCCAC...CAGGCTGGCCTCAAATTCAGAAATCCACCTGCCTCTGCCTCCCAAGTCCTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR CCA 90 bp | AATGGTGCCATGAGGTGGTGGCACACGCCTTTAATCCCAGGACTTGGGAGGCAGTCTGAAACGTGGCTGTaGTGGGCTGACTCGTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: NGAMRWWHTPLIPGLGRQSETWL*WADSSP Trigger: GGGAGACGAGTCAGCCCACCACAGCCACGTTTCAGA...CTGCCTCCCAAGTCCTGGGATTAAAGGCGTGTGCCACCACCTCATGGCACCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR GCA 90 bp | GGTCTTCCCAGTGCAGCAACAACGTTCAGAATGGATACGGTGGCCTTTTCAGAACGCCTGGTTCCTTCCTaGACCACTTGCCCCGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: GLPSAATTFRMDTVAFSERLVPS*TTCPVR Trigger: CCTCACGGGGCAAGTGGTGCAGGAAGGAACCAGGCG...TTCTGAAAAGGCCACCGTATCCATTCTGAACGTTGTTGCTGCACTGGGAAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR GCA 90 bp | AAGTCAGTAGGAGAAACCCATTCACCGGGCTCTGCCCATGGAGAGACAGACACAGAAAGCTCCTGGCTATaGCATCAGGCCCTTGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: KSVGETHSPGSAHGETDTESSWL*HQALGC Trigger: ACAGCCAAGGGCCTGATGGCATAGCCAGGAGCTTTC...TGTGTCTGTCTCTCCATGGGCAGAGCCCGGTGAATGGGTTTCTCCTACTGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR GCA 90 bp | AATGGTGCCATGAGGTGGTGGCACACGCCTTTAATCCCAGGACTTGGGAGGCAGCAGGGAGACTTTCCATaGCCACATCAGCAAGACACT | + |
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Preference number: 4 (lower is better) Translates to: NGAMRWWHTPLIPGLGRQQGDFP*PHQQDT Trigger: AGTGTCTTGCTGATGTGGGCATGGAAAGTCTCCCTG...CTGCCTCCCAAGTCCTGGGATTAAAGGCGTGTGCCACCACCTCATGGCACCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR CCA 90 bp | AATGGTGCCATGAGGTGGTGGCACACGCCTTTAATCCCAGGACTTGGGAGGCAGATAGTCTGTAGCGCCTaGTTCCTTCCTGCACCACTT | + |
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Preference number: 4 (lower is better) Translates to: NGAMRWWHTPLIPGLGRQIVCSA*FLPAPL Trigger: AAGTGGTGCAGGAAGGAACCAGGCGCTACAGACTAT...CTGCCTCCCAAGTCCTGGGATTAAAGGCGTGTGCCACCACCTCATGGCACCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR TCA 90 bp | CATTCACCGGGCTCTGCCCATGGAGAGACAGACACAGCATGTCTGTGTAAATTGGATGGTCTAGCCTGCTaGACCGTTTCCCACAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: HSPGSAHGETDTACLCKLDGLAC*TVSHKP Trigger: AGGCTTGTGGGAAACGGTTCAGCAGGCTAGACCATC...CAATTTACACAGACATGCTGTGTCTGTCTCTCCATGGGCAGAGCCCGGTGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR GCA 90 bp | GCAAGGTCTTCCCAGTGCAGCAACAACGTTCAGAATGGATACGGTGGCCTTTTCCTGGGCTCCTTCCTTTaGTCATGCTTGGCCAACGGT | + |
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Preference number: 4 (lower is better) Translates to: ARSSQCSNNVQNGYGGLFLGSFL*SCLANG Trigger: ACCGTTGGCCAAGCATGAGCAAAGGAAGGAGCCCAG...GAAAAGGCCACCGTATCCATTCTGAACGTTGTTGCTGCACTGGGAAGACCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR CCA 90 bp | GGTCTTCCCAGTGCAGCAACAACGTTCAGAATGGATACGGTGGCCTTTTCAGAAGAAACGTGGCTGTGGTaGGCTGACTCGTCTCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: GLPSAATTFRMDTVAFSEETWLW*ADSSPL Trigger: CAAGGGAGACGAGTCAGCCCACCACAGCCACGTTTC...TTCTGAAAAGGCCACCGTATCCATTCTGAACGTTGTTGCTGCACTGGGAAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR TCA 90 bp | CCTTTTCAGAAAGCATGCAAGTTACATCAGGTTGCTTCTAAGTCAGTAGGAGAAGGGTCTGGGCTCACGTaGGAGTGGGGAGACCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: PFQKACKLHQVASKSVGEGSGLT*EWGDPP Trigger: AGGCGGGTCTCCCCACTCTCACGTGAGCCCAGACCC...TTCTCCTACTGACTTAGAAGCAACCTGATGTAACTTGCATGCTTTCTGAAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR GCA 90 bp | CATTCACCGGGCTCTGCCCATGGAGAGACAGACACAGCATGTCTGTGTAAATTGACTGGGAAACATGGTTaGCGGAGTCGGTCTGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: HSPGSAHGETDTACLCKLTGKHG*RSRSEL Trigger: AAGCTCAGACCGACTCCGGCAACCATGTTTCCCAGT...CAATTTACACAGACATGCTGTGTCTGTCTCTCCATGGGCAGAGCCCGGTGAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR CCA 90 bp | GAAACCCATTCACCGGGCTCTGCCCATGGAGAGACAGACACAGCATGTCTGTGTAAATGGCTACTCAGATaGTCTAGCCTGCTGAACCGT | + |
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Preference number: 4 (lower is better) Translates to: ETHSPGSAHGETDTACLCKWLLR*SSLLNR Trigger: ACGGTTCAGCAGGCTAGACCATCTGAGTAGCCATTT...ACACAGACATGCTGTGTCTGTCTCTCCATGGGCAGAGCCCGGTGAATGGGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR CCA 90 bp | GCAAGGTCTTCCCAGTGCAGCAACAACGTTCAGAATGGATACGGTGGCCTTTTCGTGAGGTCAGTCACGTaGCGTTTGCATTTCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: ARSSQCSNNVQNGYGGLFVRSVT*RLHFLQ Trigger: CTGCAGGAAATGCAAACGCCACGTGACTGACCTCAC...GAAAAGGCCACCGTATCCATTCTGAACGTTGTTGCTGCACTGGGAAGACCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR TCA 90 bp | GGTCTTCCCAGTGCAGCAACAACGTTCAGAATGGATACGGTGGCCTTTTCAGAACTGACTCGTCTCCCTTaGGTTCTGAGAGAGCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: GLPSAATTFRMDTVAFSELTRLP*VLREQH Trigger: ATGCTGCTCTCTCAGAACTCAAGGGAGACGAGTCAG...TTCTGAAAAGGCCACCGTATCCATTCTGAACGTTGTTGCTGCACTGGGAAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR TCA 90 bp | AATGGATACGGTGGCCTTTTCAGAAAGCATGCAAGTTACATCAGGTTGCTTCTAAGCGCAAGTGGCGCTTaGGGTCTGCCTTCCGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: NGYGGLFRKHASYIRLLLSASGA*GLPSAS Trigger: TGAAGCGGAAGGCAGACCTCAAGCGCCACTTGCGCT...TAGAAGCAACCTGATGTAACTTGCATGCTTTCTGAAAAGGCCACCGTATCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR GCA 90 bp | TTCCCAGTGCAGCAACAACGTTCAGAATGGATACGGTGGCCTTTTCAGAAAGCAACATCTTGCCTGCGCTaGTCATTCAGTTGCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: FPVQQQRSEWIRWPFQKATSCLR*SFSCCR Trigger: CCTGCAGCAACTGAATGAGCAGCGCAGGCAAGATGT...TGCTTTCTGAAAAGGCCACCGTATCCATTCTGAACGTTGTTGCTGCACTGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR CCA 90 bp | GAATGGATACGGTGGCCTTTTCAGAAAGCATGCAAGTTACATCAGGTTGCTTCTAGAAGGTCTGAAACGTaGCTGTGGTGGGCTGACTCG | + |
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Preference number: 4 (lower is better) Translates to: EWIRWPFQKACKLHQVASRRSET*LWWADS Trigger: CGAGTCAGCCCACCACAGCCACGTTTCAGACCTTCT...AGAAGCAACCTGATGTAACTTGCATGCTTTCTGAAAAGGCCACCGTATCCATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR CCA 90 bp | GGTCTTCCCAGTGCAGCAACAACGTTCAGAATGGATACGGTGGCCTTTTCAGAACACATGTGTGCAGAATaGGCATTTGAACCGAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: GLPSAATTFRMDTVAFSEHMCAE*AFEPKP Trigger: AGGCTTCGGTTCAAATGCCCATTCTGCACACATGTG...TTCTGAAAAGGCCACCGTATCCATTCTGAACGTTGTTGCTGCACTGGGAAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR TCA 90 bp | TTCCCAGTGCAGCAACAACGTTCAGAATGGATACGGTGGCCTTTTCAGAAAGCATGCATTTCCTGCAGATaGGTTTGCATGCCTGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: FPVQQQRSEWIRWPFQKACISCR*VCMPGE Trigger: TTCACCAGGCATGCAAACTCATCTGCAGGAAATGCA...TGCTTTCTGAAAAGGCCACCGTATCCATTCTGAACGTTGTTGCTGCACTGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR GCA 90 bp | GGTCTTCCCAGTGCAGCAACAACGTTCAGAATGGATACGGTGGCCTTTTCAGAAGCAGATGAGTTTGCATaGCTGGTGAATAGTTCGGAA | + |
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Preference number: 4 (lower is better) Translates to: GLPSAATTFRMDTVAFSEADEFA*LVNSSE Trigger: TTCCGAACTATTCACCAGGCATGCAAACTCATCTGC...TTCTGAAAAGGCCACCGTATCCATTCTGAACGTTGTTGCTGCACTGGGAAGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR CCA 90 bp | CCTTTTCAGAAAGCATGCAAGTTACATCAGGTTGCTTCTAAGTCAGTAGGAGAAACTCCTCTGGGAGGCTaGGGGGTAACCGTACTTGTT | + |
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Preference number: 4 (lower is better) Translates to: PFQKACKLHQVASKSVGETPLGG*GVTVLV Trigger: AACAAGTACGGTTACCCCCCAGCCTCCCAGAGGAGT...TTCTCCTACTGACTTAGAAGCAACCTGATGTAACTTGCATGCTTTCTGAAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR TCA 90 bp | CAGCAACAACGTTCAGAATGGATACGGTGGCCTTTTCAGAAAGCATGCAAGTTAGTCTCCCTTGAGTTCTaGGAGAGCAGCATTTTAAAG | + |
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Preference number: 4 (lower is better) Translates to: QQQRSEWIRWPFQKACKLVSLEF*ESSILK Trigger: CTTTAAAATGCTGCTCTCTCAGAACTCAAGGGAGAC...TAACTTGCATGCTTTCTGAAAAGGCCACCGTATCCATTCTGAACGTTGTTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR TCA 90 bp | AATGGATACGGTGGCCTTTTCAGAAAGCATGCAAGTTACATCAGGTTGCTTCTACCTTATCCGAGAGGCTaGAGTAGCGATCTTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: NGYGGLFRKHASYIRLLLPYPRG*SSDLSL Trigger: AAGAGAAAGATCGCTACTTCAGCCTCTCGGATAAGG...TAGAAGCAACCTGATGTAACTTGCATGCTTTCTGAAAAGGCCACCGTATCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR GCA 90 bp | GAATGGATACGGTGGCCTTTTCAGAAAGCATGCAAGTTACATCAGGTTGCTTCTTCACAAAACACATCTTaGCTGCGCTGCTCATTCAGT | + |
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Preference number: 4 (lower is better) Translates to: EWIRWPFQKACKLHQVASSQNTS*LRCSFS Trigger: ACTGAATGAGCAGCGCAGGCAAGATGTGTTTTGTGA...AGAAGCAACCTGATGTAACTTGCATGCTTTCTGAAAAGGCCACCGTATCCATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR GCA 90 bp | CAGCAACAACGTTCAGAATGGATACGGTGGCCTTTTCAGAAAGCATGCAAGTTAAACAAGACATTCCGATaGGCTTTGAAGACCTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: QQQRSEWIRWPFQKACKLNKTFR*ALKTLP Trigger: AGGCAAGGTCTTCAAAGCGCATCGGAATGTCTTGTT...TAACTTGCATGCTTTCTGAAAAGGCCACCGTATCCATTCTGAACGTTGTTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR GCA 90 bp | CAGCAACAACGTTCAGAATGGATACGGTGGCCTTTTCAGAAAGCATGCAAGTTACTTCCACGAGAATACTaGAGTCACAAAACACATCTT | + |
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Preference number: 4 (lower is better) Translates to: QQQRSEWIRWPFQKACKLLPREY*SHKTHL Trigger: AAGATGTGTTTTGTGACTGCAGTATTCTCGTGGAAG...TAACTTGCATGCTTTCTGAAAAGGCCACCGTATCCATTCTGAACGTTGTTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS GCA 90 bp | TGCCACCGGCAGTCCTTGTCTCCATCGGCCGGGGCTGTGCGGTGTTaGTCAGCCTCCAGGTCAGCAGGGAGACTTTCCATGCCCACATCA | + |
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Preference number: 5 (lower is better) Translates to: CHRQSLSPSAGAVRC*SASRSAGRLSMPTS Trigger: TGATGTGGGCATGGAAAGTCTCCCTGCTGACCTGGAGGCTGAGCAACACCGCACAGCCCCGGCCGATGGAGACAAGGACTGCCGGTGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CCA 90 bp | TTGCTCATGCTTGGCCAACGGTCGCTGAGGACTCCTCTGGGAGGCTaGGGGGTAACCGTACTTGTTCCACGGCTTTCCAGGGTCTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: LLMLGQRSLRTPLGG*GVTVLVPRLSRVWA Trigger: AGCCCAGACCCTGGAAAGCCGTGGAACAAGTACGGTTACCCCCCAGCCTCCCAGAGGAGTCCTCAGCGACCGTTGGCCAAGCATGAGCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CCA 90 bp | TCATCTGGAAAGCTCCTGGCTATGCCATCAGGCCCTTGGCTGTACTaGAAGCCAGCAGGAGCAGGATCCACTTCGGCATCCACCGGTACC | + |
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Preference number: 5 (lower is better) Translates to: SSGKLLAMPSGPWLY*KPAGAGSTSASTGT Trigger: GGTACCGGTGGATGCCGAAGTGGATCCTGCTCCTGCTGGCTTCCAGTACAGCCAAGGGCCTGATGGCATAGCCAGGAGCTTTCCAGATGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CCA 90 bp | CTGGTCAGGTCATCTGGAAAGCTCCTGGCTATGCCATCAGGCCCTTaGCTGTACTGGAAGCCAGCAGGAGCAGGATCCACTTCGGCATCC | + |
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Preference number: 5 (lower is better) Translates to: LVRSSGKLLAMPSGP*LYWKPAGAGSTSAS Trigger: GGATGCCGAAGTGGATCCTGCTCCTGCTGGCTTCCAGTACAGCCAAGGGCCTGATGGCATAGCCAGGAGCTTTCCAGATGACCTGACCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CCA 90 bp | CGACTTCAGACGGTTGTGGCAGTCTCACGTGCTTGGCCTTTTTACTaGGCTCCTTCCTTTGCTCATGCTTGGCCAACGGTCGCTGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: RLQTVVAVSRAWPFY*APSFAHAWPTVAED Trigger: GTCCTCAGCGACCGTTGGCCAAGCATGAGCAAAGGAAGGAGCCCAGTAAAAAGGCCAAGCACGTGAGACTGCCACAACCGTCTGAAGTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR CAA 90 bp | TCCCAGGACTTGGGAGGCAGAGGCAGGTGGATTTCTGAATTTGAGGCCAGCCTGGCTGACTCGTCTCCCTaGAGTTCTGAGAGAGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: SQDLGGRGRWISEFEASLADSSP*SSERAA Trigger: TGCTGCTCTCTCAGAACTCAAGGGAGACGAGTCAGC...CAGGCTGGCCTCAAATTCAGAAATCCACCTGCCTCTGCCTCCCAAGTCCTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CCA 90 bp | GTGGCGCTTGAGGTCTGCCTTCCGCTTCACCACATGTGTGCAGAATaGGCATTTGAACCGAAGCCTGGTCAGGTCATCTGGAAAGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: VALEVCLPLHHMCAE*AFEPKPGQVIWKAP Trigger: AGGAGCTTTCCAGATGACCTGACCAGGCTTCGGTTCAAATGCCCATTCTGCACACATGTGGTGAAGCGGAAGGCAGACCTCAAGCGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR CAA 90 bp | CCCAGTGCAGCAACAACGTTCAGAATGGATACGGTGGCCTTTTCAGAAAGCATGCAGCGCAAGTGGCGCTaGAGGTCTGCCTTCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PSAATTFRMDTVAFSESMQRKWR*RSAFRF Trigger: GAAGCGGAAGGCAGACCTCAAGCGCCACTTGCGCTG...CATGCTTTCTGAAAAGGCCACCGTATCCATTCTGAACGTTGTTGCTGCACTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR CAA 90 bp | GACTTGGGAGGCAGAGGCAGGTGGATTTCTGAATTTGAGGCCAGCCTGGTCTACACATTCCGATGCGCTTaGAAGACCTTGCCTTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: DLGGRGRWISEFEASLVYTFRCA*KTLPST Trigger: CGTGGAAGGCAAGGTCTTCAAAGCGCATCGGAATGT...GTAGACCAGGCTGGCCTCAAATTCAGAAATCCACCTGCCTCTGCCTCCCAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR CAA 90 bp | GGATACGGTGGCCTTTTCAGAAAGCATGCAAGTTACATCAGGTTGCTTCTAAGTCGGGGCTGTGCGGTGTaGCTCAGCCTCCAGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GYGGLFRKHASYIRLLLSRGCAV*LSLQVS Trigger: GCTGACCTGGAGGCTGAGCAACACCGCACAGCCCCG...ACTTAGAAGCAACCTGATGTAACTTGCATGCTTTCTGAAAAGGCCACCGTATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR CAA 90 bp | GACTTGGGAGGCAGAGGCAGGTGGATTTCTGAATTTGAGGCCAGCCTGGTCTACGTCACAAAACACATCTaGCCTGCGCTGCTCATTCAG | + |
|
Preference number: 5 (lower is better) Translates to: DLGGRGRWISEFEASLVYVTKHI*PALLIQ Trigger: CTGAATGAGCAGCGCAGGCAAGATGTGTTTTGTGAC...GTAGACCAGGCTGGCCTCAAATTCAGAAATCCACCTGCCTCTGCCTCCCAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS TCA 90 bp | GGAGAAGGTCTGAAACGTGGCTGTGGTGGGCTGACTCGTCTCCCTTaGGTTCTGAGAGAGCAGCATTTTAAAGTAGCCGCTGCTTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GEGLKRGCGGLTRLP*VLREQHFKVAAACK Trigger: TTTGCAAGCAGCGGCTACTTTAAAATGCTGCTCTCTCAGAACTCAAGGGAGACGAGTCAGCCCACCACAGCCACGTTTCAGACCTTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS TCA 90 bp | TTATTTCTTTCTCTTCCTCCTCCTCGCTGTCGTCAACCTGCTGTATaGCCAGATCGGCAGACCCGTCCTCTACGATCTCCACATAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: LFLSLPPPRCRQPAV*PDRQTRPLRSPHRI Trigger: GATCCTATGTGGAGATCGTAGAGGACGGGTCTGCCGATCTGGTCATACAGCAGGTTGACGACAGCGAGGAGGAGGAAGAGAAAGAAATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR CAA 90 bp | GAATGGATACGGTGGCCTTTTCAGAAAGCATGCAAGTTACATCAGGTTGCTTCTACTGGGCTCCTTCCTTaGCTCATGCTTGGCCAACGG | + |
|
Preference number: 5 (lower is better) Translates to: EWIRWPFQKACKLHQVASTGLLP*LMLGQR Trigger: CCGTTGGCCAAGCATGAGCAAAGGAAGGAGCCCAGT...AGAAGCAACCTGATGTAACTTGCATGCTTTCTGAAAAGGCCACCGTATCCATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR CAA 90 bp | AATGGATACGGTGGCCTTTTCAGAAAGCATGCAAGTTACATCAGGTTGCTTCTAGCGCTGCTCATTCAGTaGCTGCAGGAGGTAAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: NGYGGLFRKHASYIRLLLALLIQ*LQEVRL Trigger: CAGTCTTACCTCCTGCAGCAACTGAATGAGCAGCGC...TAGAAGCAACCTGATGTAACTTGCATGCTTTCTGAAAAGGCCACCGTATCCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR CAA 90 bp | CAGCAACAACGTTCAGAATGGATACGGTGGCCTTTTCAGAAAGCATGCAAGTTATCAGTCACGTGGCGTTaGCATTTCCTGCAGATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QQQRSEWIRWPFQKACKLSVTWR*HFLQMS Trigger: ACTCATCTGCAGGAAATGCAAACGCCACGTGACTGA...TAACTTGCATGCTTTCTGAAAAGGCCACCGTATCCATTCTGAACGTTGTTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR CAA 90 bp | CCTTTTCAGAAAGCATGCAAGTTACATCAGGTTGCTTCTAAGTCAGTAGGAGAACCCGTAAGAGAGAGTTaGCCGGAGTATACGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PFQKACKLHQVASKSVGEPVRES*PEYTKS Trigger: GGACTTCGTATACTCCGGCAAACTCTCTCTTACGGG...TTCTCCTACTGACTTAGAAGCAACCTGATGTAACTTGCATGCTTTCTGAAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS-3UTR CAA 90 bp | CCTTTTCAGAAAGCATGCAAGTTACATCAGGTTGCTTCTAAGTCAGTAGGAGAATGCGCTTTGAAGACCTaGCCTTCCACGAGAATACTG | + |
|
Preference number: 5 (lower is better) Translates to: PFQKACKLHQVASKSVGECALKT*PSTRIL Trigger: CAGTATTCTCGTGGAAGGCAAGGTCTTCAAAGCGCA...TTCTCCTACTGACTTAGAAGCAACCTGATGTAACTTGCATGCTTTCTGAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CAA 90 bp | GTGCCACCGGCAGTCCTTGTCTCCATCGGCCGGGGCTGTGCGGTGTaGCTCAGCCTCCAGGTCAGCAGGGAGACTTTCCATGCCCACATC | + |
|
Preference number: 6 (lower is better) Translates to: VPPAVLVSIGRGCAV*LSLQVSRETFHAHI Trigger: GATGTGGGCATGGAAAGTCTCCCTGCTGACCTGGAGGCTGAGCAACACCGCACAGCCCCGGCCGATGGAGACAAGGACTGCCGGTGGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS GCA 72 bp | CAGTCCTTGTCTCCATCGGCCGGGGCTGTGCGGTGTTaGTCAGCCTCCAGGTCAGCAGGGAGACTTTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: QSLSPSAGAVRC*SASRSAGRLSM Trigger: CATGGAAAGTCTCCCTGCTGACCTGGAGGCTGAGCAACACCGCACAGCCCCGGCCGATGGAGACAAGGACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CCA 72 bp | CTTGGCCAACGGTCGCTGAGGACTCCTCTGGGAGGCTaGGGGGTAACCGTACTTGTTCCACGGCTTTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LGQRSLRTPLGG*GVTVLVPRLSR Trigger: CCTGGAAAGCCGTGGAACAAGTACGGTTACCCCCCAGCCTCCCAGAGGAGTCCTCAGCGACCGTTGGCCAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CAA 72 bp | GCAGTCCTTGTCTCCATCGGCCGGGGCTGTGCGGTGTaGCTCAGCCTCCAGGTCAGCAGGGAGACTTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: AVLVSIGRGCAV*LSLQVSRETFH Trigger: ATGGAAAGTCTCCCTGCTGACCTGGAGGCTGAGCAACACCGCACAGCCCCGGCCGATGGAGACAAGGACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS TCA 72 bp | TACTTGTTCCACGGCTTTCCAGGGTCTGGGCTCACGTaGGAGTGGGGAGACCCGCCTTCTTCCTGCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: YLFHGFPGSGLT*EWGDPPSSCQL Trigger: CAGCTGGCAGGAAGAAGGCGGGTCTCCCCACTCTCACGTGAGCCCAGACCCTGGAAAGCCGTGGAACAAGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS GCA 72 bp | CCACCGGTACCTGCTCTTCAGACTGGGAAACATGGTTaGCGGAGTCGGTCTGAGCTTCTCCTTTGCCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PPVPALQTGKHG*RSRSELLLCRA Trigger: AGCCCGGCAAAGGAGAAGCTCAGACCGACTCCGGCAACCATGTTTCCCAGTCTGAAGAGCAGGTACCGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS GCA 72 bp | GCAGGAGCAGGATCCACTTCGGCATCCACCGGTACCTaGTCTTCAGACTGGGAAACATGGTTGCCGGAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: AGAGSTSASTGT*SSDWETWLPES Trigger: CGACTCCGGCAACCATGTTTCCCAGTCTGAAGAGCAGGTACCGGTGGATGCCGAAGTGGATCCTGCTCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CCA 72 bp | AAGCTCCTGGCTATGCCATCAGGCCCTTGGCTGTACTaGAAGCCAGCAGGAGCAGGATCCACTTCGGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: KLLAMPSGPWLY*KPAGAGSTSAS Trigger: GGATGCCGAAGTGGATCCTGCTCCTGCTGGCTTCCAGTACAGCCAAGGGCCTGATGGCATAGCCAGGAGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CAA 90 bp | CCTGGTCAGGTCATCTGGAAAGCTCCTGGCTATGCCATCAGGCCCTaGGCTGTACTGGAAGCCAGCAGGAGCAGGATCCACTTCGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: PGQVIWKAPGYAIRP*AVLEASRSRIHFGI Trigger: GATGCCGAAGTGGATCCTGCTCCTGCTGGCTTCCAGTACAGCCAAGGGCCTGATGGCATAGCCAGGAGCTTTCCAGATGACCTGACCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CAA 90 bp | TTGTGGCAGTCTCACGTGCTTGGCCTTTTTACTGGGCTCCTTCCTTaGCTCATGCTTGGCCAACGGTCGCTGAGGACTCCTCTGGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LWQSHVLGLFTGLLP*LMLGQRSLRTPLGG Trigger: GCCTCCCAGAGGAGTCCTCAGCGACCGTTGGCCAAGCATGAGCAAAGGAAGGAGCCCAGTAAAAAGGCCAAGCACGTGAGACTGCCACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS TCA 72 bp | TGTAGCGCCTGGTTCCTTCCTGCACCACTTGCCCCGTaGGGTCAGTCACGTGGCGTTTGCATTTCCTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: CSAWFLPAPLAP*GQSRGVCISCR Trigger: TCTGCAGGAAATGCAAACGCCACGTGACTGACCTCACGGGGCAAGTGGTGCAGGAAGGAACCAGGCGCTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS GCA 72 bp | GAAGCCTGGTCAGGTCATCTGGAAAGCTCCTGGCTATaGCATCAGGCCCTTGGCTGTACTGGAAGCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EAWSGHLESSWL*HQALGCTGSQQ Trigger: CTGCTGGCTTCCAGTACAGCCAAGGGCCTGATGGCATAGCCAGGAGCTTTCCAGATGACCTGACCAGGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CCA 72 bp | AGGTATCGGGGGAGAAGGTCTGAAACGTGGCTGTGGTaGGCTGACTCGTCTCCCTTGAGTTCTGAGAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RYRGRRSETWLW*ADSSPLSSERA Trigger: TGCTCTCTCAGAACTCAAGGGAGACGAGTCAGCCCACCACAGCCACGTTTCAGACCTTCTCCCCCGATACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CCA 72 bp | TCATCTGGAAAGCTCCTGGCTATGCCATCAGGCCCTTaGCTGTACTGGAAGCCAGCAGGAGCAGGATCCACT | + |
|
Preference number: 6 (lower is better) Translates to: SSGKLLAMPSGP*LYWKPAGAGST Trigger: AGTGGATCCTGCTCCTGCTGGCTTCCAGTACAGCCAAGGGCCTGATGGCATAGCCAGGAGCTTTCCAGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CCA 72 bp | CCTTCCTGCACCACTTGCCCCGTGAGGTCAGTCACGTaGCGTTTGCATTTCCTGCAGATGAGTTTGCATGCC | + |
|
Preference number: 6 (lower is better) Translates to: PSCTTCPVRSVT*RLHFLQMSLHA Trigger: GGCATGCAAACTCATCTGCAGGAAATGCAAACGCCACGTGACTGACCTCACGGGGCAAGTGGTGCAGGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CCA 72 bp | ACGGTTGTGGCAGTCTCACGTGCTTGGCCTTTTTACTaGGCTCCTTCCTTTGCTCATGCTTGGCCAACGGTC | + |
|
Preference number: 6 (lower is better) Translates to: TVVAVSRAWPFY*APSFAHAWPTV Trigger: GACCGTTGGCCAAGCATGAGCAAAGGAAGGAGCCCAGTAAAAAGGCCAAGCACGTGAGACTGCCACAACCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CCA 72 bp | GAGGTCTGCCTTCCGCTTCACCACATGTGTGCAGAATaGGCATTTGAACCGAAGCCTGGTCAGGTCATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: EVCLPLHHMCAE*AFEPKPGQVIW Trigger: CCAGATGACCTGACCAGGCTTCGGTTCAAATGCCCATTCTGCACACATGTGGTGAAGCGGAAGGCAGACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CAA 72 bp | TCTCACGTGCTTGGCCTTTTTACTGGGCTCCTTCCTTaGCTCATGCTTGGCCAACGGTCGCTGAGGACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SHVLGLFTGLLP*LMLGQRSLRTP Trigger: AGGAGTCCTCAGCGACCGTTGGCCAAGCATGAGCAAAGGAAGGAGCCCAGTAAAAAGGCCAAGCACGTGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS TCA 72 bp | CCTTCCGCTTCACCACATGTGTGCAGAATGGGCATTTaGACCGAAGCCTGGTCAGGTCATCTGGAAAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PSASPHVCRMGI*TEAWSGHLESS Trigger: GGAGCTTTCCAGATGACCTGACCAGGCTTCGGTTCAAATGCCCATTCTGCACACATGTGGTGAAGCGGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CAA 72 bp | GCCTTCCGCTTCACCACATGTGTGCAGAATGGGCATTaGAACCGAAGCCTGGTCAGGTCATCTGGAAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AFRFTTCVQNGH*NRSLVRSSGKL Trigger: GAGCTTTCCAGATGACCTGACCAGGCTTCGGTTCAAATGCCCATTCTGCACACATGTGGTGAAGCGGAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CAA 90 bp | TTGAGGTCTGCCTTCCGCTTCACCACATGTGTGCAGAATGGGCATTaGAACCGAAGCCTGGTCAGGTCATCTGGAAAGCTCCTGGCTATG | + |
|
Preference number: 6 (lower is better) Translates to: LRSAFRFTTCVQNGH*NRSLVRSSGKLLAM Trigger: CATAGCCAGGAGCTTTCCAGATGACCTGACCAGGCTTCGGTTCAAATGCCCATTCTGCACACATGTGGTGAAGCGGAAGGCAGACCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS TCA 72 bp | CTGAAACGTGGCTGTGGTGGGCTGACTCGTCTCCCTTaGGTTCTGAGAGAGCAGCATTTTAAAGTAGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: LKRGCGGLTRLP*VLREQHFKVAA Trigger: AGCGGCTACTTTAAAATGCTGCTCTCTCAGAACTCAAGGGAGACGAGTCAGCCCACCACAGCCACGTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CCA 72 bp | GAACGACTTCAGACGGTTGTGGCAGTCTCACGTGCTTaGCCTTTTTACTGGGCTCCTTCCTTTGCTCATGCT | + |
|
Preference number: 6 (lower is better) Translates to: ERLQTVVAVSRA*PFYWAPSFAHA Trigger: AGCATGAGCAAAGGAAGGAGCCCAGTAAAAAGGCCAAGCACGTGAGACTGCCACAACCGTCTGAAGTCGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CAA 90 bp | GAAGACCTTGCCTTCCACGAGAATACTGCAGTCACAAAACACATCTaGCCTGCGCTGCTCATTCAGTTGCTGCAGGAGGTAAGACTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: EDLAFHENTAVTKHI*PALLIQLLQEVRLV Trigger: CACCAGTCTTACCTCCTGCAGCAACTGAATGAGCAGCGCAGGCAAGATGTGTTTTGTGACTGCAGTATTCTCGTGGAAGGCAAGGTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CAA 90 bp | GCGGCAGACATCACCTCTATAACATTCTGTCCCGTAAGAGAGAGTTaGCCGGAGTATACGAAGTCCAGGATGACTGTGAAGGTATCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: AADITSITFCPVRES*PEYTKSRMTVKVSG Trigger: CCCCGATACCTTCACAGTCATCCTGGACTTCGTATACTCCGGCAAACTCTCTCTTACGGGACAGAATGTTATAGAGGTGATGTCTGCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS TCA 72 bp | AGCCGCTGCTTGCAAACAAGACATTCCGATGCGCTTTaGAGACCTTGCCTTCCACGAGAATACTGCAGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: SRCLQTRHSDAL*RPCLPREYCSH Trigger: GTGACTGCAGTATTCTCGTGGAAGGCAAGGTCTTCAAAGCGCATCGGAATGTCTTGTTTGCAAGCAGCGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CCA 72 bp | TTTGCCGGGCTTAAAATGAACGACTTCAGACGGTTGTaGCAGTCTCACGTGCTTGGCCTTTTTACTGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FAGLKMNDFRRL*QSHVLGLFTGL Trigger: GAGCCCAGTAAAAAGGCCAAGCACGTGAGACTGCCACAACCGTCTGAAGTCGTTCATTTTAAGCCCGGCAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CAA 72 bp | GTCACAAAACACATCTTGCCTGCGCTGCTCATTCAGTaGCTGCAGGAGGTAAGACTGGTGAGAGGAGATCTC | + |
|
Preference number: 6 (lower is better) Translates to: VTKHILPALLIQ*LQEVRLVRGDL Trigger: GAGATCTCCTCTCACCAGTCTTACCTCCTGCAGCAACTGAATGAGCAGCGCAGGCAAGATGTGTTTTGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CAA 72 bp | GCCTTCCACGAGAATACTGCAGTCACAAAACACATCTaGCCTGCGCTGCTCATTCAGTTGCTGCAGGAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: AFHENTAVTKHI*PALLIQLLQEV Trigger: TACCTCCTGCAGCAACTGAATGAGCAGCGCAGGCAAGATGTGTTTTGTGACTGCAGTATTCTCGTGGAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS CAA 72 bp | TCCTTTGCCGGGCTTAAAATGAACGACTTCAGACGGTaGTGGCAGTCTCACGTGCTTGGCCTTTTTACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SFAGLKMNDFRR*WQSHVLGLFTG Trigger: CCCAGTAAAAAGGCCAAGCACGTGAGACTGCCACAACCGTCTGAAGTCGTTCATTTTAAGCCCGGCAAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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| CDS GCA 72 bp | CACGTGGCGTTTGCATTTCCTGCAGATGAGTTTGCATaGCTGGTGAATAGTTCGGAAATGGCTACTCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: HVAFAFPADEFA*LVNSSEMATQM Trigger: CATCTGAGTAGCCATTTCCGAACTATTCACCAGGCATGCAAACTCATCTGCAGGAAATGCAAACGCCACGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030610.3 |
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