Pregenerated sensors for ZBTB7A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035011Ensembl transcript IDs: ENSMUST00000048128.15, ENSMUST00000117956.2, ENSMUST00000119606.8, ENSMUST00000121840.8, ENSMUST00000125261.2, ENSMUST00000146895.2
Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGGATCTGGCTAGTCGAGGACCAGCCCTCTCTCGGGGACATCCCTaGGCTGGGAAGGACAGCACAGGTGGCCTGCGGCTCCCAGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: GDLASRGPALSRGHP*AGKDSTGGLRLPGL Trigger: CAGGCCTGGGAGCCGCAGGCCACCTGTGCTGTCCTTCCCAGCTCAGGGATGTCCCCGAGAGAGGGCTGGTCCTCGACTAGCCAGATCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR CCA 90 bp | CGGCCCCCTAGGACGGGCTGGCGGTTAAGGCAAGGTGGGTGTGGGTaGGCAGAAGCTGAGCGCGGAGCGGGGGTCAAGGGTTTAGTGCAA | + |
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Preference number: 1 (lower is better) Translates to: RPPRTGWRLRQGGCG*AEAERGAGVKGLVQ Trigger: TTGCACTAAACCCTTGACCCCCGCTCCGCGCTCAGCTTCTGCCCACCCACACCCACCTTGCCTTAACCGCCAGCCCGTCCTAGGGGGCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR TCA 90 bp | GACGGGCTGGCGGTTAAGGCAAGGTGGGTGTGGGTGGGCAGAAGCTaGGCGCGGAGCGGGGGTCAAGGGTTTAGTGCAATTCCCAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: DGLAVKARWVWVGRS*ARSGGQGFSAIPKG Trigger: CCCCTTGGGAATTGCACTAAACCCTTGACCCCCGCTCCGCGCTCAGCTTCTGCCCACCCACACCCACCTTGCCTTAACCGCCAGCCCGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR CCA 90 bp | GTCAGCGGGGGACACAGGAACACCCGCTACCCCCGCCGGCACCCATaGGGAAGGGCTGGACAGAGTGTGCATGGACAAGGTCCCAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: VSGGHRNTRYPRRHP*GRAGQSVHGQGPKF Trigger: AAACTTGGGACCTTGTCCATGCACACTCTGTCCAGCCCTTCCCCATGGGTGCCGGCGGGGGTAGCGGGTGTTCCTGTGTCCCCCGCTGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR GCA 90 bp | CCCTGGCTACCCAAGGGCACCCACCGAGCACCCTCAGGTCAGCTGTaGTCACACAGGGTGAATGAGCACCCCAGGGCACCCACTTTGGTT | + |
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Preference number: 1 (lower is better) Translates to: PWLPKGTHRAPSGQL*SHRVNEHPRAPTLV Trigger: AACCAAAGTGGGTGCCCTGGGGTGCTCATTCACCCTGTGTGAGCACAGCTGACCTGAGGGTGCTCGGTGGGTGCCCTTGGGTAGCCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR CCA 90 bp | AGCCCTCTCTCGGGGACATCCCTGAGCTGGGAAGGACAGCACAGGTaGCCTGCGGCTCCCAGGCCTGTGGTCTCCTACAGAGACAATGAG | + |
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Preference number: 1 (lower is better) Translates to: SPLSGTSLSWEGQHR*PAAPRPVVSYRDNE Trigger: CTCATTGTCTCTGTAGGAGACCACAGGCCTGGGAGCCGCAGGCCACCTGTGCTGTCCTTCCCAGCTCAGGGATGTCCCCGAGAGAGGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR CCA 90 bp | GGCTTCGAGGCTGCCATTATGCCTGCCACAAGTGACAGCCTTCCCTaGCTACCCAAGGGCACCCACCGAGCACCCTCAGGTCAGCTGTGC | + |
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Preference number: 1 (lower is better) Translates to: GFEAAIMPATSDSLP*LPKGTHRAPSGQLC Trigger: GCACAGCTGACCTGAGGGTGCTCGGTGGGTGCCCTTGGGTAGCCAGGGAAGGCTGTCACTTGTGGCAGGCATAATGGCAGCCTCGAAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR CCA 90 bp | CCTGTAGGGATAGGAAGGCAAAGAGCAGCAACTACTCAGCAGGGGTaGCCTTGCTCAGGTCACAGGCTTGGGGCCAGCTGCAGGCTGGTC | + |
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Preference number: 1 (lower is better) Translates to: PVGIGRQRAATTQQG*PCSGHRLGASCRLV Trigger: GACCAGCCTGCAGCTGGCCCCAAGCCTGTGACCTGAGCAAGGCCACCCCTGCTGAGTAGTTGCTGCTCTTTGCCTTCCTATCCCTACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR CCA 90 bp | TCTGGCCATCCAGGCTTGGGAATAAATAGATTTGTATGTCAGTGGTaGCCAGGGTGGATGTGCAGAGATGCGGAGGCCACAGGCCGGGAG | + |
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Preference number: 1 (lower is better) Translates to: SGHPGLGINRFVCQW*PGWMCRDAEATGRE Trigger: CTCCCGGCCTGTGGCCTCCGCATCTCTGCACATCCACCCTGGCCACCACTGACATACAAATCTATTTATTCCCAAGCCTGGATGGCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR GCA 90 bp | CAGAGTGGAGGGATCTGGAGGACGTTGTGCGCAGTGAGAAACCCATaGGCTGGTACAGTGGCCACTCACATGGATGGAGCTCAAGTACAA | + |
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Preference number: 1 (lower is better) Translates to: QSGGIWRTLCAVRNP*AGTVATHMDGAQVQ Trigger: TTGTACTTGAGCTCCATCCATGTGAGTGGCCACTGTACCAGCGCATGGGTTTCTCACTGCGCACAACGTCCTCCAGATCCCTCCACTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| 3UTR CCA 90 bp | TGGAGGGATCTGGAGGACGTTGTGCGCAGTGAGAAACCCATGCGCTaGTACAGTGGCCACTCACATGGATGGAGCTCAAGTACAAGTCGA | + |
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Preference number: 1 (lower is better) Translates to: WRDLEDVVRSEKPMR*YSGHSHGWSSSTSR Trigger: TCGACTTGTACTTGAGCTCCATCCATGTGAGTGGCCACTGTACCAGCGCATGGGTTTCTCACTGCGCACAACGTCCTCCAGATCCCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| 3UTR GCA 90 bp | AGTGGCCACTCACATGGATGGAGCTCAAGTACAAGTCGAGAGGACTaGACAGTGTCTGAAACCTCAGCATGGGAGAGGGTAAGCAGACCC | + |
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Preference number: 1 (lower is better) Translates to: SGHSHGWSSSTSRED*TVSETSAWERVSRP Trigger: GGGTCTGCTTACCCTCTCCCATGCTGAGGTTTCAGACACTGTGCAGTCCTCTCGACTTGTACTTGAGCTCCATCCATGTGAGTGGCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| 3UTR TCA 90 bp | ACATGGATGGAGCTCAAGTACAAGTCGAGAGGACTGCACAGTGTCTaGAACCTCAGCATGGGAGAGGGTAAGCAGACCCAGCTCTGTATG | + |
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Preference number: 1 (lower is better) Translates to: TWMELKYKSRGLHSV*NLSMGEGKQTQLCM Trigger: CATACAGAGCTGGGTCTGCTTACCCTCTCCCATGCTGAGGTTTCAGACACTGTGCAGTCCTCTCGACTTGTACTTGAGCTCCATCCATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGGGGATGTCCCGGCGCTGGGCCCATGCGGTGGCTGCGGCCCCCTAGGACAAGGTGGGTGTGGGTaGGCAGAAGCTGAGCGCGGA | + |
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Preference number: 2 (lower is better) Translates to: GLGDVPALGPCGGCGPLGQGGCG*AEAERG Trigger: TCCGCGCTCAGCTTCTGCCCACCCACACCCACCTTG...TCCTAGGGGGCCGCAGCCACCGCATGGGCCCAGCGCCGGGACATCCCCCAGCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGCTGGGAAGGACAGCACAGGTGGCCTGCGGCTCCCAGGCCTGTGGTCTCTGCCGTGAAGGAGGGTaGCGGGGACCCCAGCGGCCC | + |
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Preference number: 2 (lower is better) Translates to: PELGRTAQVACGSQACGLCREGG*RGPQRP Trigger: GGGCCGCTGGGGTCCCCGCCACCCTCCTTCACGGCA...GAGACCACAGGCCTGGGAGCCGCAGGCCACCTGTGCTGTCCTTCCCAGCTCAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGGGGATGTCCCGGCGCTGGGCCCATGCGGTGGCTGCGGCCCCCTAGGATCGTGGTGCTGGGGGTaGGTGGTGGTTTCTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: GLGDVPALGPCGGCGPLGSWCWG*VVVSLC Trigger: ACAGAGAGAAACCACCACCCACCCCCAGCACCACGA...TCCTAGGGGGCCGCAGCCACCGCATGGGCCCAGCGCCGGGACATCCCCCAGCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGGGGATGTCCCGGCGCTGGGCCCATGCGGTGGCTGCGGCCCCCTAGGAGCTTACTCGTGGTGCTaGGGGTGGGTGGTGGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: GLGDVPALGPCGGCGPLGAYSWC*GWVVVS Trigger: AGAAACCACCACCCACCCCCAGCACCACGAGTAAGC...TCCTAGGGGGCCGCAGCCACCGCATGGGCCCAGCGCCGGGACATCCCCCAGCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR CCA 90 bp | ATCCCTGAGCTGGGAAGGACAGCACAGGTGGCCTGCGGCTCCCAGGCCTGTGGTGGTCGCCCTGAGCAGTaGCCCCGAGGGCCCCGTCAG | + |
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Preference number: 2 (lower is better) Translates to: IPELGRTAQVACGSQACGGRPEQ*PRGPRQ Trigger: CTGACGGGGCCCTCGGGGCCACTGCTCAGGGCGACC...ACCACAGGCCTGGGAGCCGCAGGCCACCTGTGCTGTCCTTCCCAGCTCAGGGAT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGGGGATGTCCCGGCGCTGGGCCCATGCGGTGGCTGCGGCCCCCTAGGACCCATGGGGAAGGGCTaGACAGAGTGTGCATGGACA | + |
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Preference number: 2 (lower is better) Translates to: GLGDVPALGPCGGCGPLGPMGKG*TECAWT Trigger: TGTCCATGCACACTCTGTCCAGCCCTTCCCCATGGG...TCCTAGGGGGCCGCAGCCACCGCATGGGCCCAGCGCCGGGACATCCCCCAGCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR CCA 90 bp | ATCCCTGAGCTGGGAAGGACAGCACAGGTGGCCTGCGGCTCCCAGGCCTGTGGTAGGCCCCTGGCAGACTaGGGGACCCACGGGTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: IPELGRTAQVACGSQACGRPLAD*GTHGSL Trigger: AAGGGACCCGTGGGTCCCCCAGTCTGCCAGGGGCCT...ACCACAGGCCTGGGAGCCGCAGGCCACCTGTGCTGTCCTTCCCAGCTCAGGGAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR CCA 90 bp | AACTACTCAGCAGGGGTGGCCTTGCTCAGGTCACAGGCTTGGGGCCAGCTGCAGACGGGTCCCTTCCCATaGCGCCCTGGACGCCCCACC | + |
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Preference number: 2 (lower is better) Translates to: NYSAGVALLRSQAWGQLQTGPFP*RPGRPT Trigger: GGTGGGGCGTCCAGGGCGCCATGGGAAGGGACCCGT...CTGCAGCTGGCCCCAAGCCTGTGACCTGAGCAAGGCCACCCCTGCTGAGTAGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR CCA 90 bp | ATCCCTGAGCTGGGAAGGACAGCACAGGTGGCCTGCGGCTCCCAGGCCTGTGGTACACGTCCGCGCAGGTaGATGGAGGGCGTCTGGACA | + |
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Preference number: 2 (lower is better) Translates to: IPELGRTAQVACGSQACGTRPRR*MEGVWT Trigger: TGTCCAGACGCCCTCCATCCACCTGCGCGGACGTGT...ACCACAGGCCTGGGAGCCGCAGGCCACCTGTGCTGTCCTTCCCAGCTCAGGGAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR CCA 90 bp | ATCCCTGAGCTGGGAAGGACAGCACAGGTGGCCTGCGGCTCCCAGGCCTGTGGTCACGGGGTGGGGGCATaGCCAAGCAGAGATGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: IPELGRTAQVACGSQACGHGVGA*PSRDGK Trigger: CTTCCCATCTCTGCTTGGCCATGCCCCCACCCCGTG...ACCACAGGCCTGGGAGCCGCAGGCCACCTGTGCTGTCCTTCCCAGCTCAGGGAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR TCA 90 bp | ATCCCTGAGCTGGGAAGGACAGCACAGGTGGCCTGCGGCTCCCAGGCCTGTGGTCACATCCTAAGGATCTaGGAAAGGCAGGCGCCCGCG | + |
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Preference number: 2 (lower is better) Translates to: IPELGRTAQVACGSQACGHILRI*ERQAPA Trigger: CGCGGGCGCCTGCCTTTCTCAGATCCTTAGGATGTG...ACCACAGGCCTGGGAGCCGCAGGCCACCTGTGCTGTCCTTCCCAGCTCAGGGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR GCA 90 bp | CCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACTGGCCAAGCAGGCTGGGCCCCTaGGTGGGACCCCTTGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: PTIVPKGSIHPKSSGHWPSRLGP*VGPLGG Trigger: TCCACCAAGGGGTCCCACGCAGGGGCCCAGCCTGCT...TGGCCAGTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR GCA 90 bp | GGGCACCCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACACAGCACAGGTGGCCTaGGGCTCCCAGGCCTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: GHPTIVPKGSIHPKSSGHTAQVA*GSQACG Trigger: ACCACAGGCCTGGGAGCCGCAGGCCACCTGTGCTGT...GTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGGGTGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR CCA 90 bp | GGGCACCCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACCCCGGCCCCTGTCCGTaGCCTGTGGCTCGGTCAATA | + |
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Preference number: 2 (lower is better) Translates to: GHPTIVPKGSIHPKSSGHPGPCP*PVARSI Trigger: TATTGACCGAGCCACAGGCCACGGACAGGGGCCGGG...GTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGGGTGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR CCA 90 bp | GGGCACCCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACTCTGGGAATGGGGGCTaGGGGCCCAACTTGGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: GHPTIVPKGSIHPKSSGHSGNGG*GPNLAS Trigger: GGAGGCCAAGTTGGGCCCCCAGCCCCCATTCCCAGA...GTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGGGTGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR CCA 90 bp | AACTACTCAGCAGGGGTGGCCTTGCTCAGGTCACAGGCTTGGGGCCAGCTGCAGGGACCCCTTGGTGGATaGGACGAGGGACACAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: NYSAGVALLRSQAWGQLQGPLGG*DEGHRS Trigger: GCTCCTGTGTCCCTCGTCCCATCCACCAAGGGGTCC...CTGCAGCTGGCCCCAAGCCTGTGACCTGAGCAAGGCCACCCCTGCTGAGTAGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR CCA 90 bp | GTGGCCTGTGGCTCGGTCAATACCGGGCCTTTGGGGGAAGCCAGAGTTTGGGGTTGGGGCATGGGGATCTaGCTAGTCGAGGACCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: VACGSVNTGPLGEARVWGWGMGI*LVEDQP Trigger: GGGCTGGTCCTCGACTAGCCAGATCCCCATGCCCCA...ACCCCAAACTCTGGCTTCCCCCAAAGGCCCGGTATTGACCGAGCCACAGGCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR CCA 90 bp | AACTACTCAGCAGGGGTGGCCTTGCTCAGGTCACAGGCTTGGGGCCAGCTGCAGCCAGAGTTTGGGGTATaGGGGGCTCGGGTGCTAGCC | + |
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Preference number: 2 (lower is better) Translates to: NYSAGVALLRSQAWGQLQPEFGV*GARVLA Trigger: GGCTAGCACCCGAGCCCCCCATACCCCAAACTCTGG...CTGCAGCTGGCCCCAAGCCTGTGACCTGAGCAAGGCCACCCCTGCTGAGTAGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR CCA 90 bp | AACTACTCAGCAGGGGTGGCCTTGCTCAGGTCACAGGCTTGGGGCCAGCTGCAGGCTGGGGGCCCAACTTaGCCTCCACAGCACAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: NYSAGVALLRSQAWGQLQAGGPT*PPQHSS Trigger: GGAACTGTGCTGTGGAGGCCAAGTTGGGCCCCCAGC...CTGCAGCTGGCCCCAAGCCTGTGACCTGAGCAAGGCCACCCCTGCTGAGTAGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR GCA 90 bp | CCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACTGGCCAGTGGATGTGCAGAGATaGGGAGGCCACAGGCCGGGA | + |
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Preference number: 2 (lower is better) Translates to: PTIVPKGSIHPKSSGHWPVDVQR*GGHRPG Trigger: TCCCGGCCTGTGGCCTCCGCATCTCTGCACATCCAC...TGGCCAGTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR GCA 90 bp | ATCCCTGAGCTGGGAAGGACAGCACAGGTGGCCTGCGGCTCCCAGGCCTGTGGTTCCCTTGTCTGTCTCTaGCTGAGTCCCTGGGGTTAC | + |
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Preference number: 2 (lower is better) Translates to: IPELGRTAQVACGSQACGSLVCL*LSPWGY Trigger: GTAACCCCAGGGACTCAGGCAGAGACAGACAAGGGA...ACCACAGGCCTGGGAGCCGCAGGCCACCTGTGCTGTCCTTCCCAGCTCAGGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR CCA 90 bp | GCCCCTGCGTGGGACCCCTTGGTGGATGGGACGAGGGACACAGGAGCAGATGGGGCTGGGGGTGGGTGGTaGTTTCTCTCTGTTCTTAGT | + |
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Preference number: 2 (lower is better) Translates to: APAWDPLVDGTRDTGADGAGGGW*FLSVLS Trigger: ACTAAGAACAGAGAGAAACCACCACCCACCCCCAGC...CCCATCTGCTCCTGTGTCCCTCGTCCCATCCACCAAGGGGTCCCACGCAGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR CCA 90 bp | CCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACTGGCCAGTCCGCGCAGGTGGATaGAGGGCGTCTGGACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: PTIVPKGSIHPKSSGHWPVRAGG*RASGQR Trigger: TCTCTGTCCAGACGCCCTCCATCCACCTGCGCGGAC...TGGCCAGTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR CCA 90 bp | GGGCACCCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACGGGACATCCCTGAGCTaGGAAGGACAGCACAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: GHPTIVPKGSIHPKSSGHGTSLS*EGQHRW Trigger: CCACCTGTGCTGTCCTTCCCAGCTCAGGGATGTCCC...GTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGGGTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR TCA 90 bp | GGGCACCCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACCCCTGGGGTTACCTCTaGTCTTGGCTATGTCCACCC | + |
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Preference number: 2 (lower is better) Translates to: GHPTIVPKGSIHPKSSGHPWGYL*SWLCPP Trigger: GGGTGGACATAGCCAAGATCAGAGGTAACCCCAGGG...GTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGGGTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR GCA 90 bp | CCTGAGCTGGGAAGGACAGCACAGGTGGCCTGCGGCTCCCAGGCCTGTGGTCTCCGTTCAGTTACAAAGTaGCAAGATCCCCACGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: PELGRTAQVACGSQACGLRSVTK*QDPHVA Trigger: AGCCACGTGGGGATCTTGGCACTTTGTAACTGAACG...GAGACCACAGGCCTGGGAGCCGCAGGCCACCTGTGCTGTCCTTCCCAGCTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR GCA 90 bp | CCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACTGGCCAACTGCTTACTCGTGGTaGTGGGGGTGGGTGGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: PTIVPKGSIHPKSSGHWPTAYSW*WGWVVV Trigger: AACCACCACCCACCCCCAGCACCACGAGTAAGCAGT...TGGCCAGTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR CCA 90 bp | AACTACTCAGCAGGGGTGGCCTTGCTCAGGTCACAGGCTTGGGGCCAGCTGCAGGGTGCTGGGGGTGGGTaGTGGTTTCTCTCTGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: NYSAGVALLRSQAWGQLQGAGGG*WFLSVL Trigger: AAGAACAGAGAGAAACCACCACCCACCCCCAGCACC...CTGCAGCTGGCCCCAAGCCTGTGACCTGAGCAAGGCCACCCCTGCTGAGTAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR CCA 90 bp | GGGCACCCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACTCGGGTGCTAGCCCCTaGGTTACAGTCAGTGCCTTT | + |
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Preference number: 2 (lower is better) Translates to: GHPTIVPKGSIHPKSSGHSGASP*VTVSAF Trigger: AAAGGCACTGACTGTAACCCAGGGGCTAGCACCCGA...GTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGGGTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR CCA 90 bp | GGGCACCCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACACAAGGTCCCAAGTTTaGTTCCACCTTGGCCACGGG | + |
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Preference number: 2 (lower is better) Translates to: GHPTIVPKGSIHPKSSGHTRSQV*FHLGHG Trigger: CCCGTGGCCAAGGTGGAACCAAACTTGGGACCTTGT...GTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGGGTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR CAA 90 bp | ATCGAGGCTCAGACATACGCACAGAGTGGAGGGATCTGGAGGACGTaGTGCGCAGTGAGAAACCCATGCGCTGGTACAGTGGCCACTCAC | + |
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Preference number: 2 (lower is better) Translates to: IEAQTYAQSGGIWRT*CAVRNPCAGTVATH Trigger: GTGAGTGGCCACTGTACCAGCGCATGGGTTTCTCACTGCGCACAACGTCCTCCAGATCCCTCCACTCTGTGCGTATGTCTGAGCCTCGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCACCCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACTACAGTCAGTGCCTTTaGGTAAAAAGAGGGGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: GHPTIVPKGSIHPKSSGHYSQCL*VKRGGA Trigger: GGCACCCCCTCTTTTTACTCAAAGGCACTGACTGTA...GTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGGGTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR CCA 90 bp | GTGGCCTGTGGCTCGGTCAATACCGGGCCTTTGGGGGAAGCCAGAGTTTGGGGTAGATTTGTATGTCAGTaGTGGCCAGGGTGGATGTGC | + |
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Preference number: 2 (lower is better) Translates to: VACGSVNTGPLGEARVWGRFVCQ*WPGWMC Trigger: GCACATCCACCCTGGCCACCACTGACATACAAATCT...ACCCCAAACTCTGGCTTCCCCCAAAGGCCCGGTATTGACCGAGCCACAGGCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR-3UTR TCA 90 bp | ATCCCTGAGCTGGGAAGGACAGCACAGGTGGCCTGCGGCTCCCAGGCCTGTGGTTGCTGCCGGCTCCTCTaGGGAAAAGAATATTTTATA | + |
|
Preference number: 2 (lower is better) Translates to: IPELGRTAQVACGSQACGCCRLL*GKEYFI Trigger: TATAAAATATTCTTTTCCTCAGAGGAGCCGGCAGCA...ACCACAGGCCTGGGAGCCGCAGGCCACCTGTGCTGTCCTTCCCAGCTCAGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR-3UTR TCA 90 bp | GACATACGCACAGAGTGGAGGGATCTGGAGGACGTTGTGCGCAGTGAGAAACCCGGACTGCACAGTGTCTaGAACCTCAGCATGGGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: DIRTEWRDLEDVVRSEKPGLHSV*NLSMGE Trigger: CTCTCCCATGCTGAGGTTTCAGACACTGTGCAGTCC...GGGTTTCTCACTGCGCACAACGTCCTCCAGATCCCTCCACTCTGTGCGTATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
||
| 3UTR-3UTR GCA 90 bp | TCGAGGCTCAGACATACGCACAGAGTGGAGGGATCTGGAGGACGTTGTGCGCAGACAAGTCGAGAGGACTaGACAGTGTCTGAAACCTCA | + |
|
Preference number: 2 (lower is better) Translates to: SRLRHTHRVEGSGGRCAQTSRED*TVSETS Trigger: TGAGGTTTCAGACACTGTGCAGTCCTCTCGACTTGT...CTGCGCACAACGTCCTCCAGATCCCTCCACTCTGTGCGTATGTCTGAGCCTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTTTTGTGACATTAAGCTGTGGCCTCTCTCACTCCCTTGTCTGTCTCTGCCTGCAGTGGTGGCCAGGGTaGATGTGCAGAGATGCGGAG | + |
|
Preference number: 2 (lower is better) Translates to: CFVTLSCGLSHSLVCLCLQWWPG*MCRDAE Trigger: CTCCGCATCTCTGCACATCCACCCTGGCCACCACTG...CAGGCAGAGACAGACAAGGGAGTGAGAGAGGCCACAGCTTAATGTCACAAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR CCA 72 bp | CCCTGGCAGACTGGGGGACCCACGGGTCCCTTCCCATaGCGCCCTGGACGCCCCACCCTGAGTCTCGGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: PWQTGGPTGPFP*RPGRPTLSLGS Trigger: GCTCCCGAGACTCAGGGTGGGGCGTCCAGGGCGCCATGGGAAGGGACCCGTGGGTCCCCCAGTCTGCCAGGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR CCA 72 bp | GGGCCCATGCGGTGGCTGCGGCCCCCTAGGACGGGCTaGCGGTTAAGGCAAGGTGGGTGTGGGTGGGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GPMRWLRPPRTG*RLRQGGCGWAE Trigger: TTCTGCCCACCCACACCCACCTTGCCTTAACCGCCAGCCCGTCCTAGGGGGCCGCAGCCACCGCATGGGCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR TCA 72 bp | CGGGTCCCTTCCCATGGCGCCCTGGACGCCCCACCCTaGGTCTCGGGAGCGCAAGTGGATTCTACCGGAGCG | + |
|
Preference number: 3 (lower is better) Translates to: RVPSHGALDAPP*VSGAQVDSTGA Trigger: CGCTCCGGTAGAATCCACTTGCGCTCCCGAGACTCAGGGTGGGGCGTCCAGGGCGCCATGGGAAGGGACCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR GCA 72 bp | CTTGGCCTCCACAGCACAGTTCCCGGGACAGCTCACTaGGGAAGTGGGGTGCGAGGGGAGGCCAGCACCACC | + |
|
Preference number: 3 (lower is better) Translates to: LGLHSTVPGTAH*GSGVRGEASTT Trigger: GGTGGTGCTGGCCTCCCCTCGCACCCCACTTCCGCAGTGAGCTGTCCCGGGAACTGTGCTGTGGAGGCCAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR CCA 72 bp | AGCCAAGAGCAGGCTGGGCCCCTGCGTGGGACCCCTTaGTGGATGGGACGAGGGACACAGGAGCAGATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SQEQAGPLRGTP*WMGRGTQEQMG Trigger: CCCCATCTGCTCCTGTGTCCCTCGTCCCATCCACCAAGGGGTCCCACGCAGGGGCCCAGCCTGCTCTTGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR CCA 72 bp | AGGACGGGCTGGCGGTTAAGGCAAGGTGGGTGTGGGTaGGCAGAAGCTGAGCGCGGAGCGGGGGTCAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RTGWRLRQGGCG*AEAERGAGVKG Trigger: ACCCTTGACCCCCGCTCCGCGCTCAGCTTCTGCCCACCCACACCCACCTTGCCTTAACCGCCAGCCCGTCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR GCA 72 bp | ATCACCCTCGCCTTAGCCAAGAGCAGGCTGGGCCCCTaGGTGGGACCCCTTGGTGGATGGGACGAGGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: ITLALAKSRLGP*VGPLGGWDEGH Trigger: GTGTCCCTCGTCCCATCCACCAAGGGGTCCCACGCAGGGGCCCAGCCTGCTCTTGGCTAAGGCGAGGGTGAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR CCA 72 bp | TCGGGGACATCCCTGAGCTGGGAAGGACAGCACAGGTaGCCTGCGGCTCCCAGGCCTGTGGTCTCCTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: SGTSLSWEGQHR*PAAPRPVVSYR Trigger: TCTGTAGGAGACCACAGGCCTGGGAGCCGCAGGCCACCTGTGCTGTCCTTCCCAGCTCAGGGATGTCCCCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR CCA 72 bp | CACCCGCTACCCCCGCCGGCACCCATGGGGAAGGGCTaGACAGAGTGTGCATGGACAAGGTCCCAAGTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: HPLPPPAPMGKG*TECAWTRSQVW Trigger: CCAAACTTGGGACCTTGTCCATGCACACTCTGTCCAGCCCTTCCCCATGGGTGCCGGCGGGGGTAGCGGGTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR CCA 72 bp | GGACACAGGAACACCCGCTACCCCCGCCGGCACCCATaGGGAAGGGCTGGACAGAGTGTGCATGGACAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: GHRNTRYPRRHP*GRAGQSVHGQG Trigger: ACCTTGTCCATGCACACTCTGTCCAGCCCTTCCCCATGGGTGCCGGCGGGGGTAGCGGGTGTTCCTGTGTCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR TCA 72 bp | CCTGGGCTTCGAGGCTGCCATTATGCCTGCCACAAGTaGCAGCCTTCCCTGGCTACCCAAGGGCACCCACCG | + |
|
Preference number: 3 (lower is better) Translates to: PGLRGCHYACHK*QPSLATQGHPP Trigger: CGGTGGGTGCCCTTGGGTAGCCAGGGAAGGCTGTCACTTGTGGCAGGCATAATGGCAGCCTCGAAGCCCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR GCA 72 bp | CCGCGCAGGTGGATGGAGGGCGTCTGGACAGAGAACTaGTTACTCGTGGTGCTGGGGGTGGGTGGTGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PRRWMEGVWTEN*LLVVLGVGGGF Trigger: GAAACCACCACCCACCCCCAGCACCACGAGTAAGCAGTTCTCTGTCCAGACGCCCTCCATCCACCTGCGCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR GCA 72 bp | AGGCAAAGAGCAGCAACTACTCAGCAGGGGTGGCCTTaGTCAGGTCACAGGCTTGGGGCCAGCTGCAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RQRAATTQQGWP*SGHRLGASCRL Trigger: CAGCCTGCAGCTGGCCCCAAGCCTGTGACCTGAGCAAGGCCACCCCTGCTGAGTAGTTGCTGCTCTTTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR CCA 72 bp | GCTGCCATTATGCCTGCCACAAGTGACAGCCTTCCCTaGCTACCCAAGGGCACCCACCGAGCACCCTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: AAIMPATSDSLP*LPKGTHRAPSG Trigger: ACCTGAGGGTGCTCGGTGGGTGCCCTTGGGTAGCCAGGGAAGGCTGTCACTTGTGGCAGGCATAATGGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR TCA 72 bp | GCGGTTAAGGCAAGGTGGGTGTGGGTGGGCAGAAGCTaGGCGCGGAGCGGGGGTCAAGGGTTTAGTGCAATT | + |
|
Preference number: 3 (lower is better) Translates to: AVKARWVWVGRS*ARSGGQGFSAI Trigger: AATTGCACTAAACCCTTGACCCCCGCTCCGCGCTCAGCTTCTGCCCACCCACACCCACCTTGCCTTAACCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR TCA 72 bp | CCTCCTACACACCCCCTACTTACACTGTCTATTCCCTaGACGACCAGCCGGGGCTCCACCTGGGCTTCGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PPTHPLLTLSIP*TTSRGSTWASR Trigger: CCTCGAAGCCCAGGTGGAGCCCCGGCTGGTCGTTCAGGGAATAGACAGTGTAAGTAGGGGGTGTGTAGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR TCA 72 bp | GGACACAGGAGCAGATGGGGCCACATCCTAAGGATCTaGGAAAGGCAGGCGCCCGCGGCCATGGTATATACA | + |
|
Preference number: 3 (lower is better) Translates to: GHRSRWGHILRI*ERQAPAAMVYT Trigger: TGTATATACCATGGCCGCGGGCGCCTGCCTTTCTCAGATCCTTAGGATGTGGCCCCATCTGCTCCTGTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR GCA 72 bp | ACATACGCACAGAGTGGAGGGATCTGGAGGACGTTGTaGGCAGTGAGAAACCCATGCGCTGGTACAGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TYAQSGGIWRTL*AVRNPCAGTVA Trigger: GGCCACTGTACCAGCGCATGGGTTTCTCACTGCGCACAACGTCCTCCAGATCCCTCCACTCTGTGCGTATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
||
| 3UTR CCA 72 bp | GGATGGAGGGCGTCTGGACAGAGAACTGCTTACTCGTaGTGCTGGGGGTGGGTGGTGGTTTCTCTCTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GWRASGQRTAYS*CWGWVVVSLCS Trigger: AGAACAGAGAGAAACCACCACCCACCCCCAGCACCACGAGTAAGCAGTTCTCTGTCCAGACGCCCTCCATCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR TCA 72 bp | CTTGTCTGTCTCTGCCTGAGTCCCTGGGGTTACCTCTaGTCTTGGCTATGTCCACCCAAAACTGCTGCCGGC | + |
|
Preference number: 3 (lower is better) Translates to: LVCLCLSPWGYL*SWLCPPKTAAG Trigger: GCCGGCAGCAGTTTTGGGTGGACATAGCCAAGATCAGAGGTAACCCCAGGGACTCAGGCAGAGACAGACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR CCA 72 bp | CTGGAGGACGTTGTGCGCAGTGAGAAACCCATGCGCTaGTACAGTGGCCACTCACATGGATGGAGCTCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LEDVVRSEKPMR*YSGHSHGWSSS Trigger: ACTTGAGCTCCATCCATGTGAGTGGCCACTGTACCAGCGCATGGGTTTCTCACTGCGCACAACGTCCTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
||
| 3UTR CCA 72 bp | ATCGAGGCTCAGACATACGCACAGAGTGGAGGGATCTaGAGGACGTTGTGCGCAGTGAGAAACCCATGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: IEAQTYAQSGGI*RTLCAVRNPCA Trigger: AGCGCATGGGTTTCTCACTGCGCACAACGTCCTCCAGATCCCTCCACTCTGTGCGTATGTCTGAGCCTCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
||
| 3UTR CCA 72 bp | CTTACATCCAGTCAGTGGAATGTCTGTTCTGTGCTCTaGACCCCCATGAACCAGGCCTGGGCCCCCAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: LTSSQWNVCSVL*TPMNQAWAPKF Trigger: GAATTTGGGGGCCCAGGCCTGGTTCATGGGGGTCCAGAGCACAGAACAGACATTCCACTGACTGGATGTAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR TCA 72 bp | GAGCTCAAGTACAAGTCGAGAGGACTGCACAGTGTCTaGAACCTCAGCATGGGAGAGGGTAAGCAGACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ELKYKSRGLHSV*NLSMGEGKQTQ Trigger: CTGGGTCTGCTTACCCTCTCCCATGCTGAGGTTTCAGACACTGTGCAGTCCTCTCGACTTGTACTTGAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
||
| 3UTR CCA 72 bp | CCAGGCTTGGGAATAAATAGATTTGTATGTCAGTGGTaGCCAGGGTGGATGTGCAGAGATGCGGAGGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: PGLGINRFVCQW*PGWMCRDAEAT Trigger: TGTGGCCTCCGCATCTCTGCACATCCACCCTGGCCACCACTGACATACAAATCTATTTATTCCCAAGCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR CCA 72 bp | CATCCAGGCTTGGGAATAAATAGATTTGTATGTCAGTaGTGGCCAGGGTGGATGTGCAGAGATGCGGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: HPGLGINRFVCQ*WPGWMCRDAEA Trigger: GGCCTCCGCATCTCTGCACATCCACCCTGGCCACCACTGACATACAAATCTATTTATTCCCAAGCCTGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR GCA 72 bp | TCACATGGATGGAGCTCAAGTACAAGTCGAGAGGACTaGACAGTGTCTGAAACCTCAGCATGGGAGAGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SHGWSSSTSRED*TVSETSAWERV Trigger: TACCCTCTCCCATGCTGAGGTTTCAGACACTGTGCAGTCCTCTCGACTTGTACTTGAGCTCCATCCATGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
||
| 3UTR TCA 72 bp | ACCCCAAGTCTAGTGGCCACTGGCCAGGATGACATGTaGTTAAAGTTGGTTTTATTGCGAGAAGGTGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: TPSLVATGQDDM*LKLVLLREGGG Trigger: CCCTCCACCTTCTCGCAATAAAACCAACTTTAATCACATGTCATCCTGGCCAGTGGCCACTAGACTTGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| 3UTR CCA 72 bp | CCCACACTTTTTATAAAGATTCTTACATCCAGTCAGTaGAATGTCTGTTCTGTGCTCTGGACCCCCATGAAC | + |
|
Preference number: 3 (lower is better) Translates to: PTLFIKILTSSQ*NVCSVLWTPMN Trigger: GTTCATGGGGGTCCAGAGCACAGAACAGACATTCCACTGACTGGATGTAAGAATCTTTATAAAAAGTGTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| CDS-3UTR TCA 90 bp | GGGCTGGGGGATGTCCCGGCGCTGGGCCCATGCGGTGGCTGCGGCCCCCTAGGAGCCCTCTGCAGCGCCTaGCAGGAAGCCCGGGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLGDVPALGPCGGCGPLGALCSA*QEARGV Trigger: GACTCCCCGGGCTTCCTGTCAGGCGCTGCAGAGGGC...TCCTAGGGGGCCGCAGCCACCGCATGGGCCCAGCGCCGGGACATCCCCCAGCCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGGGGATGTCCCGGCGCTGGGCCCATGCGGTGGCTGCGGCCCCCTAGGAATCAGCCGGGGGCCCTaGGCCATAGAAGTCCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLGDVPALGPCGGCGPLGISRGP*AIEVQA Trigger: GGCTTGGACTTCTATGGCCCAGGGCCCCCGGCTGAT...TCCTAGGGGGCCGCAGCCACCGCATGGGCCCAGCGCCGGGACATCCCCCAGCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| CDS-3UTR CCA 90 bp | CCTGAGCTGGGAAGGACAGCACAGGTGGCCTGCGGCTCCCAGGCCTGTGGTCTCCGCAGCAGGTTGCGCTaGTCAGTGGGGCCCGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PELGRTAQVACGSQACGLRSRLR*SVGPAP Trigger: CGGGGCGGGCCCCACTGACCAGCGCAACCTGCTGCG...GAGACCACAGGCCTGGGAGCCGCAGGCCACCTGTGCTGTCCTTCCCAGCTCAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| CDS-3UTR GCA 90 bp | CCTGAGCTGGGAAGGACAGCACAGGTGGCCTGCGGCTCCCAGGCCTGTGGTCTCGCTTCTCCTGGCCATTaGGCGGGGCGTCCGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PELGRTAQVACGSQACGLASPGH*AGRPGA Trigger: GGCTCCCGGACGCCCCGCGCAATGGCCAGGAGAAGC...GAGACCACAGGCCTGGGAGCCGCAGGCCACCTGTGCTGTCCTTCCCAGCTCAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| CDS-3UTR CCA 90 bp | ATCCCTGAGCTGGGAAGGACAGCACAGGTGGCCTGCGGCTCCCAGGCCTGTGGTGGAACGGGATCCCGATaGGGCCGTCCACGCCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IPELGRTAQVACGSQACGGTGSR*GRPRRQ Trigger: CTGGCGGCGTGGACGGCCCCATCGGGATCCCGTTCC...ACCACAGGCCTGGGAGCCGCAGGCCACCTGTGCTGTCCTTCCCAGCTCAGGGAT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| CDS-3UTR CCA 90 bp | GCCCCTGCGTGGGACCCCTTGGTGGATGGGACGAGGGACACAGGAGCAGATGGGCCACAGCCTCCTTGGTaGCGTCCAGGTCGTCGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: APAWDPLVDGTRDTGADGPQPPW*RPGRRR Trigger: CCGACGACGACCTGGACGCCACCAAGGAGGCTGTGG...CCCATCTGCTCCTGTGTCCCTCGTCCCATCCACCAAGGGGTCCCACGCAGGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| CDS-3UTR GCA 90 bp | GCCCCTGCGTGGGACCCCTTGGTGGATGGGACGAGGGACACAGGAGCAGATGGGCGCTCAGGATGTCGCTaGTGTGGTCCGGGAACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: APAWDPLVDGTRDTGADGRSGCR*CGPGTG Trigger: TCCCGTTCCCGGACCACAGCAGCGACATCCTGAGCG...CCCATCTGCTCCTGTGTCCCTCGTCCCATCCACCAAGGGGTCCCACGCAGGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| CDS-3UTR CCA 90 bp | CCTGAGCTGGGAAGGACAGCACAGGTGGCCTGCGGCTCCCAGGCCTGTGGTCTCGCACCGAGCGGTGCGTaGGGAACTCACGTCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PELGRTAQVACGSQACGLAPSGA*GTHVLP Trigger: TGGAAGGACGTGAGTTCCCCACGCACCGCTCGGTGC...GAGACCACAGGCCTGGGAGCCGCAGGCCACCTGTGCTGTCCTTCCCAGCTCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| CDS-3UTR CCA 90 bp | CCTGAGCTGGGAAGGACAGCACAGGTGGCCTGCGGCTCCCAGGCCTGTGGTCTCCTGTGTGGTGGCCGGTaGGGCAGTAGGAGGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PELGRTAQVACGSQACGLLCGGR*GSRRWE Trigger: TTCCCACCTCCTACTGCCCCACCGGCCACCACACAG...GAGACCACAGGCCTGGGAGCCGCAGGCCACCTGTGCTGTCCTTCCCAGCTCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| CDS-3UTR CCA 90 bp | ATCCCTGAGCTGGGAAGGACAGCACAGGTGGCCTGCGGCTCCCAGGCCTGTGGTGCGGCGCCGCACTGCTaGCACAGGTACGGCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IPELGRTAQVACGSQACGAAPHC*HRYGFS Trigger: TGAGAAGCCGTACCTGTGCCAGCAGTGCGGCGCCGC...ACCACAGGCCTGGGAGCCGCAGGCCACCTGTGCTGTCCTTCCCAGCTCAGGGAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| CDS-3UTR TCA 90 bp | GTGGCCTGTGGCTCGGTCAATACCGGGCCTTTGGGGGAAGCCAGAGTTTGGGGTGTGTGCGTGCGGATGTaGCGGGGCAGCTTGCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VACGSVNTGPLGEARVWGVCVRM*RGSLPA Trigger: TGCCGGCAAGCTGCCCCGTCACATCCGCACGCACAC...ACCCCAAACTCTGGCTTCCCCCAAAGGCCCGGTATTGACCGAGCCACAGGCCAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| CDS-3UTR GCA 90 bp | AACTACTCAGCAGGGGTGGCCTTGCTCAGGTCACAGGCTTGGGGCCAGCTGCAGTGGCACGCAGCAGGTTaGGCTGGTCAGTGGGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: NYSAGVALLRSQAWGQLQWHAAG*AGQWGP Trigger: CGGGCCCCACTGACCAGCGCAACCTGCTGCGTGCCA...CTGCAGCTGGCCCCAAGCCTGTGACCTGAGCAAGGCCACCCCTGCTGAGTAGTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| CDS-3UTR GCA 90 bp | AACTACTCAGCAGGGGTGGCCTTGCTCAGGTCACAGGCTTGGGGCCAGCTGCAGGCCATTGCAGTCGCCTaGGGCCACAGCGGCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NYSAGVALLRSQAWGQLQAIAVA*GHSGHS Trigger: GCTGTGGCCGCTGTGGCCGCAGGCGACTGCAATGGC...CTGCAGCTGGCCCCAAGCCTGTGACCTGAGCAAGGCCACCCCTGCTGAGTAGTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| CDS-3UTR GCA 90 bp | GCCCCTGCGTGGGACCCCTTGGTGGATGGGACGAGGGACACAGGAGCAGATGGGTGTGACGGGGCAGCTTaGCGGCACCCTGAATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: APAWDPLVDGTRDTGADGCDGAA*RHPESP Trigger: AGGTGATTCAGGGTGCCGGCAAGCTGCCCCGTCACA...CCCATCTGCTCCTGTGTCCCTCGTCCCATCCACCAAGGGGTCCCACGCAGGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| CDS-3UTR CCA 90 bp | ATCCCTGAGCTGGGAAGGACAGCACAGGTGGCCTGCGGCTCCCAGGCCTGTGGTAGGATGTCGCTGCTGTaGTCCGGGAACGGGATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: IPELGRTAQVACGSQACGRMSLL*SGNGIP Trigger: CGGGATCCCGTTCCCGGACCACAGCAGCGACATCCT...ACCACAGGCCTGGGAGCCGCAGGCCACCTGTGCTGTCCTTCCCAGCTCAGGGAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| CDS-3UTR TCA 90 bp | CCTGAGCTGGGAAGGACAGCACAGGTGGCCTGCGGCTCCCAGGCCTGTGGTCTCAGCTTGCCGGCACCCTaGATCACCTTCTCGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: PELGRTAQVACGSQACGLSLPAP*ITFSQM Trigger: CATCTGCGAGAAGGTGATTCAGGGTGCCGGCAAGCT...GAGACCACAGGCCTGGGAGCCGCAGGCCACCTGTGCTGTCCTTCCCAGCTCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
||
| CDS-3UTR GCA 90 bp | AACTACTCAGCAGGGGTGGCCTTGCTCAGGTCACAGGCTTGGGGCCAGCTGCAGAAGGCGGCGCCGCACTaGTGGCACAGGTACGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NYSAGVALLRSQAWGQLQKAAPH*WHRYGF Trigger: GAAGCCGTACCTGTGCCAGCAGTGCGGCGCCGCCTT...CTGCAGCTGGCCCCAAGCCTGTGACCTGAGCAAGGCCACCCCTGCTGAGTAGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR CCA 90 bp | CCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACTGGCCAAGGTCGGCGCACACGTaGCTCACGGCCGGGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PTIVPKGSIHPKSSGHWPRSAHT*LTAGIS Trigger: GGAGATCCCGGCCGTGAGCCACGTGTGCGCCGACCT...TGGCCAGTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR TCA 90 bp | GCCCCTGCGTGGGACCCCTTGGTGGATGGGACGAGGGACACAGGAGCAGATGGGTGCAGCCGTCCTTCTTaGGGTGTCTGTGCAGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: APAWDPLVDGTRDTGADGCSRPS*GVCADG Trigger: ACCATCTGCACAGACACCTCAAGAAGGACGGCTGCA...CCCATCTGCTCCTGTGTCCCTCGTCCCATCCACCAAGGGGTCCCACGCAGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR GCA 90 bp | CCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACTGGCCAGCCAGCACCGAGCGGTaGGTGGGGAACTCACGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PTIVPKGSIHPKSSGHWPASTER*VGNSRP Trigger: AGGACGTGAGTTCCCCACGCACCGCTCGGTGCTGGC...TGGCCAGTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR CCA 90 bp | CGAGAGGACTGCACAGTGTCTGAAACCTCAGCATGGGAGAGGGTAAGCAGACCCGGAACGGGATCCCGATaGGGCCGTCCACGCCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: REDCTVSETSAWERVSRPGTGSR*GRPRRQ Trigger: CTGGCGGCGTGGACGGCCCCATCGGGATCCCGTTCC...GGGTCTGCTTACCCTCTCCCATGCTGAGGTTTCAGACACTGTGCAGTCCTCTCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR CCA 90 bp | TGCGCTGGTACAGTGGCCACTCACATGGATGGAGCTCAAGTACAAGTCGAGAGGCGCAGCAGGTTGCGCTaGTCAGTGGGGCCCGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CAGTVATHMDGAQVQVERRSRLR*SVGPAP Trigger: CGGGGCGGGCCCCACTGACCAGCGCAACCTGCTGCG...CCTCTCGACTTGTACTTGAGCTCCATCCATGTGAGTGGCCACTGTACCAGCGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR CCA 90 bp | ATCCCTGAGCTGGGAAGGACAGCACAGGTGGCCTGCGGCTCCCAGGCCTGTGGTACTCCAGGTACTCCTTaGCACGCAGCAGGTTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPELGRTAQVACGSQACGTPGTP*HAAGCA Trigger: AGCGCAACCTGCTGCGTGCCAAGGAGTACCTGGAGT...ACCACAGGCCTGGGAGCCGCAGGCCACCTGTGCTGTCCTTCCCAGCTCAGGGAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR TCA 90 bp | CCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACTGGCCATCGCAAAGCAGCCCCTaGGTCCGCTGCTCGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTIVPKGSIHPKSSGHWPSQSSP*VRCSFR Trigger: CCTGAACGAGCAGCGGACTCAGGGGCTGCTTTGCGA...TGGCCAGTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR TCA 90 bp | CCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACTGGCCATGTAGGCGAAGTCCATaGGCGCCGTCAGTGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PTIVPKGSIHPKSSGHWPCRRSP*APSVPR Trigger: CCGAGGCACTGACGGCGCTCATGGACTTCGCCTACA...TGGCCAGTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR TCA 90 bp | ATCCCTGAGCTGGGAAGGACAGCACAGGTGGCCTGCGGCTCCCAGGCCTGTGGTCTTCTCACCCTTCTGTaGCCAGGCTGGGTACACATC | + |
|
Preference number: 4 (lower is better) Translates to: IPELGRTAQVACGSQACGLLTLL*PGWVHI Trigger: GATGTGTACCCAGCCTGGTCACAGAAGGGTGAGAAG...ACCACAGGCCTGGGAGCCGCAGGCCACCTGTGCTGTCCTTCCCAGCTCAGGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR GCA 90 bp | GCCCCTGCGTGGGACCCCTTGGTGGATGGGACGAGGGACACAGGAGCAGATGGGATCTCGTACACGTTCTaGTGGTCCACTACAGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: APAWDPLVDGTRDTGADGISYTF*WSTTAP Trigger: GGGAGCTGTAGTGGACCAGCAGAACGTGTACGAGAT...CCCATCTGCTCCTGTGTCCCTCGTCCCATCCACCAAGGGGTCCCACGCAGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR GCA 90 bp | CCTGAGCTGGGAAGGACAGCACAGGTGGCCTGCGGCTCCCAGGCCTGTGGTCTCAGCGCACAAAGGTCTTaGAGCAGCTATCGCACTGGT | + |
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Preference number: 4 (lower is better) Translates to: PELGRTAQVACGSQACGLSAQRS*SSYRTG Trigger: ACCAGTGCGATAGCTGCTGCAAGACCTTTGTGCGCT...GAGACCACAGGCCTGGGAGCCGCAGGCCACCTGTGCTGTCCTTCCCAGCTCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR CCA 90 bp | CGCAGTGAGAAACCCATGCGCTGGTACAGTGGCCACTCACATGGATGGAGCTCAAGGTCGGCGCACACGTaGCTCACGGCCGGGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSEKPMRWYSGHSHGWSSRSAHT*LTAGIS Trigger: GGAGATCCCGGCCGTGAGCCACGTGTGCGCCGACCT...TGAGCTCCATCCATGTGAGTGGCCACTGTACCAGCGCATGGGTTTCTCACTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR TCA 90 bp | GCGCTGGTACAGTGGCCACTCACATGGATGGAGCTCAAGTACAAGTCGAGAGGAGTGTGCGTGCGGATGTaGCGGGGCAGCTTGCCGGCA | + |
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Preference number: 4 (lower is better) Translates to: ALVQWPLTWMELKYKSRGVCVRM*RGSLPA Trigger: TGCCGGCAAGCTGCCCCGTCACATCCGCACGCACAC...TCCTCTCGACTTGTACTTGAGCTCCATCCATGTGAGTGGCCACTGTACCAGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR CCA 90 bp | TCGAGGCTCAGACATACGCACAGAGTGGAGGGATCTGGAGGACGTTGTGCGCAGAGGATGTCGCTGCTGTaGTCCGGGAACGGGATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SRLRHTHRVEGSGGRCAQRMSLL*SGNGIP Trigger: CGGGATCCCGTTCCCGGACCACAGCAGCGACATCCT...CTGCGCACAACGTCCTCCAGATCCCTCCACTCTGTGCGTATGTCTGAGCCTCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR CCA 90 bp | ACATACGCACAGAGTGGAGGGATCTGGAGGACGTTGTGCGCAGTGAGAAACCCATGGGGCAGTAGGAGGTaGGAAGAGCCCTCCGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TYAQSGGIWRTLCAVRNPWGSRR*EEPSGR Trigger: CCGCCCGGAGGGCTCTTCCCACCTCCTACTGCCCCA...TGGGTTTCTCACTGCGCACAACGTCCTCCAGATCCCTCCACTCTGTGCGTATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR CCA 90 bp | GGGCACCCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACTTAAAGTGCTTCTCCTaGCCATTGCGCGGGGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GHPTIVPKGSIHPKSSGHLKCFS*PLRGAS Trigger: GGACGCCCCGCGCAATGGCCAGGAGAAGCACTTTAA...GTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGGGTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR CAA 72 bp | AAGGCAAAGAGCAGCAACTACTCAGCAGGGGTGGCCTaGCTCAGGTCACAGGCTTGGGGCCAGCTGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KAKSSNYSAGVA*LRSQAWGQLQA Trigger: AGCCTGCAGCTGGCCCCAAGCCTGTGACCTGAGCAAGGCCACCCCTGCTGAGTAGTTGCTGCTCTTTGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR GCA 90 bp | GGCCACTCACATGGATGGAGCTCAAGTACAAGTCGAGAGGACTGCACAGTGTCTTGGCACGCAGCAGGTTaGGCTGGTCAGTGGGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GHSHGWSSSTSREDCTVSWHAAG*AGQWGP Trigger: CGGGCCCCACTGACCAGCGCAACCTGCTGCGTGCCA...AGACACTGTGCAGTCCTCTCGACTTGTACTTGAGCTCCATCCATGTGAGTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR GCA 90 bp | AACTACTCAGCAGGGGTGGCCTTGCTCAGGTCACAGGCTTGGGGCCAGCTGCAGACCGATGACATCATCTaGTGTAGCAGCGTGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NYSAGVALLRSQAWGQLQTDDII*CSSVLA Trigger: GGCCAGCACGCTGCTACAGCAGATGATGTCATCGGT...CTGCAGCTGGCCCCAAGCCTGTGACCTGAGCAAGGCCACCCCTGCTGAGTAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR CCA 90 bp | GGGCACCCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACTCGTACACGTTCTGCTaGTCCACTACAGCTCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: GHPTIVPKGSIHPKSSGHSYTFC*STTAPD Trigger: GTCGGGAGCTGTAGTGGACCAGCAGAACGTGTACGA...GTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGGGTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR CCA 90 bp | ACATACGCACAGAGTGGAGGGATCTGGAGGACGTTGTGCGCAGTGAGAAACCCACCACAGCCTCCTTGGTaGCGTCCAGGTCGTCGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TYAQSGGIWRTLCAVRNPPQPPW*RPGRRR Trigger: CCGACGACGACCTGGACGCCACCAAGGAGGCTGTGG...TGGGTTTCTCACTGCGCACAACGTCCTCCAGATCCCTCCACTCTGTGCGTATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR CCA 90 bp | GTGGCCTGTGGCTCGGTCAATACCGGGCCTTTGGGGGAAGCCAGAGTTTGGGGTCAGATGGGACACTTCTaGAAGGCCTTGGCCCGGATT | + |
|
Preference number: 4 (lower is better) Translates to: VACGSVNTGPLGEARVWGQMGHF*KALARI Trigger: AATCCGGGCCAAGGCCTTCCAGAAGTGTCCCATCTG...ACCCCAAACTCTGGCTTCCCCCAAAGGCCCGGTATTGACCGAGCCACAGGCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR CCA 90 bp | GTGGCCTGTGGCTCGGTCAATACCGGGCCTTTGGGGGAAGCCAGAGTTTGGGGTAGGTGTCTGTGCAGATaGTCGGAGCGCACAAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VACGSVNTGPLGEARVWGRCLCR*SERTKV Trigger: GACCTTTGTGCGCTCCGACCATCTGCACAGACACCT...ACCCCAAACTCTGGCTTCCCCCAAAGGCCCGGTATTGACCGAGCCACAGGCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR TCA 90 bp | CCATGCGCTGGTACAGTGGCCACTCACATGGATGGAGCTCAAGTACAAGTCGAGTCGCAAAGCAGCCCCTaGGTCCGCTGCTCGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PCAGTVATHMDGAQVQVESQSSP*VRCSFR Trigger: CCTGAACGAGCAGCGGACTCAGGGGCTGCTTTGCGA...CTCGACTTGTACTTGAGCTCCATCCATGTGAGTGGCCACTGTACCAGCGCATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR TCA 90 bp | CCATGCGCTGGTACAGTGGCCACTCACATGGATGGAGCTCAAGTACAAGTCGAGTGTAGGCGAAGTCCATaGGCGCCGTCAGTGCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PCAGTVATHMDGAQVQVECRRSP*APSVPR Trigger: CCGAGGCACTGACGGCGCTCATGGACTTCGCCTACA...CTCGACTTGTACTTGAGCTCCATCCATGTGAGTGGCCACTGTACCAGCGCATGG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR TCA 90 bp | CCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACTGGCCATCAGGTAGTAGTCCATaGCGCCCTTGTCGTCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PTIVPKGSIHPKSSGHWPSGSSP*RPCRRF Trigger: GAACCGACGACAAGGGCGTCATGGACTACTACCTGA...TGGCCAGTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR TCA 90 bp | GGGCACCCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACCCTCGTGGGCTCCACTaGAGTACTTCAGGTAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GHPTIVPKGSIHPKSSGHPRGLH*STSGSS Trigger: ACTACTACCTGAAGTACTTCAGTGGAGCCCACGAGG...GTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGGGTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR GCA 90 bp | ACTGATCTGGGAACAACGGTCAGCAGGTCAGCCATCAAGGAAGCCCTTCCTACTGCCAGCACCGAGCGGTaGGTGGGGAACTCACGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TDLGTTVSRSAIKEALPTASTER*VGNSRP Trigger: AGGACGTGAGTTCCCCACGCACCGCTCGGTGCTGGC...AGTAGGAAGGGCTTCCTTGATGGCTGACCTGCTGACCGTTGTTCCCAGATCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR GCA 90 bp | TCAAGTACAAGTCGAGAGGACTGCACAGTGTCTGAAACCTCAGCATGGGAGAGGGCCATTGCAGTCGCCTaGGGCCACAGCGGCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSTSREDCTVSETSAWERAIAVA*GHSGHS Trigger: GCTGTGGCCGCTGTGGCCGCAGGCGACTGCAATGGC...CCTCTCCCATGCTGAGGTTTCAGACACTGTGCAGTCCTCTCGACTTGTACTTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR GCA 90 bp | GACATACGCACAGAGTGGAGGGATCTGGAGGACGTTGTGCGCAGTGAGAAACCCCTTCTTCTTCACCGGTaGCAGCCCCTGCACGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DIRTEWRDLEDVVRSEKPLLLHR*QPLHGH Trigger: ATGGCCGTGCAGGGGCTGGCACCGGTGAAGAAGAAG...GGGTTTCTCACTGCGCACAACGTCCTCCAGATCCCTCCACTCTGTGCGTATGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR GCA 90 bp | CTGGGAACAACGGTCAGCAGGTCAGCCATCAAGGAAGCCCTTCCTACTAGGAGCTGTGACGGGGCAGCTTaGCGGCACCCTGAATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LGTTVSRSAIKEALPTRSCDGAA*RHPESP Trigger: AGGTGATTCAGGGTGCCGGCAAGCTGCCCCGTCACA...GCTCCTAGTAGGAAGGGCTTCCTTGATGGCTGACCTGCTGACCGTTGTTCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR GCA 90 bp | AACTACTCAGCAGGGGTGGCCTTGCTCAGGTCACAGGCTTGGGGCCAGCTGCAGTTCTTGAGGTGTCTGTaGAGATGGTCGGAGCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: NYSAGVALLRSQAWGQLQFLRCL*RWSERT Trigger: TGTGCGCTCCGACCATCTGCACAGACACCTCAAGAA...CTGCAGCTGGCCCCAAGCCTGTGACCTGAGCAAGGCCACCCCTGCTGAGTAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR CCA 90 bp | GCGCTGGTACAGTGGCCACTCACATGGATGGAGCTCAAGTACAAGTCGAGAGGAATCAGCCGGGGGCCCTaGGCCATAGAAGTCCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALVQWPLTWMELKYKSRGISRGP*AIEVQA Trigger: GGCTTGGACTTCTATGGCCCAGGGCCCCCGGCTGAT...TCCTCTCGACTTGTACTTGAGCTCCATCCATGTGAGTGGCCACTGTACCAGCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR CCA 90 bp | GCGCTGGTACAGTGGCCACTCACATGGATGGAGCTCAAGTACAAGTCGAGAGGACTGTGTGGTGGCCGGTaGGGCAGTAGGAGGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALVQWPLTWMELKYKSRGLCGGR*GSRRWE Trigger: TTCCCACCTCCTACTGCCCCACCGGCCACCACACAG...TCCTCTCGACTTGTACTTGAGCTCCATCCATGTGAGTGGCCACTGTACCAGCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR TCA 90 bp | CTGGGAACAACGGTCAGCAGGTCAGCCATCAAGGAAGCCCTTCCTACTAGGAGCAGCTTGCCGGCACCCTaGATCACCTTCTCGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LGTTVSRSAIKEALPTRSSLPAP*ITFSQM Trigger: CATCTGCGAGAAGGTGATTCAGGGTGCCGGCAAGCT...GCTCCTAGTAGGAAGGGCTTCCTTGATGGCTGACCTGCTGACCGTTGTTCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR TCA 90 bp | TGTTTTGTGACATTAAGCTGTGGCCTCTCTCACTCCCTTGTCTGTCTCTGCCTGTACATTCAGGCGGCCTaGGCCGTCCGGGCTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CFVTLSCGLSHSLVCLCLYIQAA*AVRAGL Trigger: GAGGCCAGCCCGGACGGCTCAGGCCGCCTGAATGTA...CAGGCAGAGACAGACAAGGGAGTGAGAGAGGCCACAGCTTAATGTCACAAAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR GCA 90 bp | CCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACTGGCCATCCTCGTCCTTAAAGTaGTTCTCCTGGCCATTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PTIVPKGSIHPKSSGHWPSSSLK*FSWPLR Trigger: GCGCAATGGCCAGGAGAAGCACTTTAAGGACGAGGA...TGGCCAGTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR CCA 90 bp | TGTTTTGTGACATTAAGCTGTGGCCTCTCTCACTCCCTTGTCTGTCTCTGCCTGTGGGGCAGTAGGAGGTaGGAAGAGCCCTCCGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CFVTLSCGLSHSLVCLCLWGSRR*EEPSGR Trigger: CCGCCCGGAGGGCTCTTCCCACCTCCTACTGCCCCA...CAGGCAGAGACAGACAAGGGAGTGAGAGAGGCCACAGCTTAATGTCACAAAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR CCA 90 bp | GTGGCCTGTGGCTCGGTCAATACCGGGCCTTTGGGGGAAGCCAGAGTTTGGGGTACTTCTGGAAGGCCTTaGCCCGGATTTTCTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VACGSVNTGPLGEARVWGTSGRP*PGFSSH Trigger: GTGAGAAGAAAATCCGGGCCAAGGCCTTCCAGAAGT...ACCCCAAACTCTGGCTTCCCCCAAAGGCCCGGTATTGACCGAGCCACAGGCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| 3UTR CAA 72 bp | CTGTCTCTGCCTGAGTCCCTGGGGTTACCTCTGATCTaGGCTATGTCCACCCAAAACTGCTGCCGGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLPESLGLPLI*AMSTQNCCRLL Trigger: GAGGAGCCGGCAGCAGTTTTGGGTGGACATAGCCAAGATCAGAGGTAACCCCAGGGACTCAGGCAGAGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR GCA 90 bp | TCAAGTACAAGTCGAGAGGACTGCACAGTGTCTGAAACCTCAGCATGGGAGAGGCGCTCAGGATGTCGCTaGTGTGGTCCGGGAACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSTSREDCTVSETSAWERRSGCR*CGPGTG Trigger: TCCCGTTCCCGGACCACAGCAGCGACATCCTGAGCG...CCTCTCCCATGCTGAGGTTTCAGACACTGTGCAGTCCTCTCGACTTGTACTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR CCA 90 bp | GACATACGCACAGAGTGGAGGGATCTGGAGGACGTTGTGCGCAGTGAGAAACCCTCGTACACGTTCTGCTaGTCCACTACAGCTCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: DIRTEWRDLEDVVRSEKPSYTFC*STTAPD Trigger: GTCGGGAGCTGTAGTGGACCAGCAGAACGTGTACGA...GGGTTTCTCACTGCGCACAACGTCCTCCAGATCCCTCCACTCTGTGCGTATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR CCA 90 bp | TGCGCTGGTACAGTGGCCACTCACATGGATGGAGCTCAAGTACAAGTCGAGAGGACTCCAGGTACTCCTTaGCACGCAGCAGGTTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: CAGTVATHMDGAQVQVERTPGTP*HAAGCA Trigger: AGCGCAACCTGCTGCGTGCCAAGGAGTACCTGGAGT...CCTCTCGACTTGTACTTGAGCTCCATCCATGTGAGTGGCCACTGTACCAGCGCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
||
| 3UTR CAA 72 bp | CAGACATACGCACAGAGTGGAGGGATCTGGAGGACGTaGTGCGCAGTGAGAAACCCATGCGCTGGTACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QTYAQSGGIWRT*CAVRNPCAGTV Trigger: CACTGTACCAGCGCATGGGTTTCTCACTGCGCACAACGTCCTCCAGATCCCTCCACTCTGTGCGTATGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR TCA 90 bp | ACATACGCACAGAGTGGAGGGATCTGGAGGACGTTGTGCGCAGTGAGAAACCCATCAGGTAGTAGTCCATaGCGCCCTTGTCGTCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TYAQSGGIWRTLCAVRNPSGSSP*RPCRRF Trigger: GAACCGACGACAAGGGCGTCATGGACTACTACCTGA...TGGGTTTCTCACTGCGCACAACGTCCTCCAGATCCCTCCACTCTGTGCGTATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR GCA 90 bp | GGGCACCCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACTATTCATGGGGTTACTaGGGAAGAACTCCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GHPTIVPKGSIHPKSSGHYSWGY*GRTPGT Trigger: AGTACCTGGAGTTCTTCCGCAGTAACCCCATGAATA...GTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGGGTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR CCA 90 bp | ACATACGCACAGAGTGGAGGGATCTGGAGGACGTTGTGCGCAGTGAGAAACCCACAGATGGGACACTTCTaGAAGGCCTTGGCCCGGATT | + |
|
Preference number: 4 (lower is better) Translates to: TYAQSGGIWRTLCAVRNPQMGHF*KALARI Trigger: AATCCGGGCCAAGGCCTTCCAGAAGTGTCCCATCTG...TGGGTTTCTCACTGCGCACAACGTCCTCCAGATCCCTCCACTCTGTGCGTATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR TCA 90 bp | CTGATCTGGGAACAACGGTCAGCAGGTCAGCCATCAAGGAAGCCCTTCCTACTACTTCTCACCCTTCTGTaGCCAGGCTGGGTACACATC | + |
|
Preference number: 4 (lower is better) Translates to: LIWEQRSAGQPSRKPFLLLLTLL*PGWVHI Trigger: GATGTGTACCCAGCCTGGTCACAGAAGGGTGAGAAG...TAGTAGGAAGGGCTTCCTTGATGGCTGACCTGCTGACCGTTGTTCCCAGATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR GCA 90 bp | TGTTTTGTGACATTAAGCTGTGGCCTCTCTCACTCCCTTGTCTGTCTCTGCCTGCTTCTTCTTCACCGGTaGCAGCCCCTGCACGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CFVTLSCGLSHSLVCLCLLLLHR*QPLHGH Trigger: ATGGCCGTGCAGGGGCTGGCACCGGTGAAGAAGAAG...CAGGCAGAGACAGACAAGGGAGTGAGAGAGGCCACAGCTTAATGTCACAAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR GCA 90 bp | ACTGATCTGGGAACAACGGTCAGCAGGTCAGCCATCAAGGAAGCCCTTCCTACTACCGATGACATCATCTaGTGTAGCAGCGTGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TDLGTTVSRSAIKEALPTTDDII*CSSVLA Trigger: GGCCAGCACGCTGCTACAGCAGATGATGTCATCGGT...AGTAGGAAGGGCTTCCTTGATGGCTGACCTGCTGACCGTTGTTCCCAGATCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR TCA 90 bp | GTACAGTGGCCACTCACATGGATGGAGCTCAAGTACAAGTCGAGAGGACTGCACCCTCGTGGGCTCCACTaGAGTACTTCAGGTAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VQWPLTWMELKYKSRGLHPRGLH*STSGSS Trigger: ACTACTACCTGAAGTACTTCAGTGGAGCCCACGAGG...GTGCAGTCCTCTCGACTTGTACTTGAGCTCCATCCATGTGAGTGGCCACTGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR CCA 90 bp | AGTCGAGAGGACTGCACAGTGTCTGAAACCTCAGCATGGGAGAGGGTAAGCAGATCACCTTCTCGCAGATaGGACACTTCTGGAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SREDCTVSETSAWERVSRSPSRR*DTSGRP Trigger: AGGCCTTCCAGAAGTGTCCCATCTGCGAGAAGGTGA...TCTGCTTACCCTCTCCCATGCTGAGGTTTCAGACACTGTGCAGTCCTCTCGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR CCA 90 bp | ACTGATCTGGGAACAACGGTCAGCAGGTCAGCCATCAAGGAAGCCCTTCCTACTACTTCTGGAAGGCCTTaGCCCGGATTTTCTTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TDLGTTVSRSAIKEALPTTSGRP*PGFSSH Trigger: GTGAGAAGAAAATCCGGGCCAAGGCCTTCCAGAAGT...AGTAGGAAGGGCTTCCTTGATGGCTGACCTGCTGACCGTTGTTCCCAGATCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR CCA 90 bp | TGTTTTGTGACATTAAGCTGTGGCCTCTCTCACTCCCTTGTCTGTCTCTGCCTGTCACCTTCTCGCAGATaGGACACTTCTGGAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CFVTLSCGLSHSLVCLCLSPSRR*DTSGRP Trigger: AGGCCTTCCAGAAGTGTCCCATCTGCGAGAAGGTGA...CAGGCAGAGACAGACAAGGGAGTGAGAGAGGCCACAGCTTAATGTCACAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR GCA 90 bp | GGCCACTCACATGGATGGAGCTCAAGTACAAGTCGAGAGGACTGCACAGTGTCTTATTCATGGGGTTACTaGGGAAGAACTCCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GHSHGWSSSTSREDCTVSYSWGY*GRTPGT Trigger: AGTACCTGGAGTTCTTCCGCAGTAACCCCATGAATA...AGACACTGTGCAGTCCTCTCGACTTGTACTTGAGCTCCATCCATGTGAGTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS GCA 90 bp | CGGCGGTGGCCACCGCCGGGCCACCTGCACCATCGTCTCCTCCGCTaGCCGCTACATTCAGGCGGCCTGAGCCGTCCGGGCTGGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RRWPPPGHLHHRLLR*PLHSGGLSRPGWPP Trigger: AGGAGGCCAGCCCGGACGGCTCAGGCCGCCTGAATGTAGCGGGCAGCGGAGGAGACGATGGTGCAGGTGGCCCGGCGGTGGCCACCGCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 |
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| CDS TCA 90 bp | CCGTCGGGCTGGCTCGCGTCGCCCACATCATCAGCCGCCAGAATCTaGCGCTCCAGCAGGTCGGCGCACACGTGGCTCACGGCCGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: PSGWLASPTSSAARI*RSSRSAHTWLTAGI Trigger: GATCCCGGCCGTGAGCCACGTGTGCGCCGACCTGCTGGAGCGTCAGATTCTGGCGGCTGATGATGTGGGCGACGCGAGCCAGCCCGACGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 ENSMUST00000125261.2 |
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| CDS GCA 90 bp | GGTTACTGCGGAAGAACTCCAGGTACTCCTTGGCACGCAGCAGGTTaGGCTGGTCAGTGGGGCCCGCCCCGTCGGGCTGGCTCGCGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: GYCGRTPGTPWHAAG*AGQWGPPRRAGSRR Trigger: GCGACGCGAGCCAGCCCGACGGGGCGGGCCCCACTGACCAGCGCAACCTGCTGCGTGCCAAGGAGTACCTGGAGTTCTTCCGCAGTAACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 ENSMUST00000125261.2 |
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| CDS CCA 90 bp | ACCCTCATCTCCATCGCCGGCTGGGGGCCGATCAGCCGGGGGCCCTaGGCCATAGAAGTCCAAGCCATTGCAGTCGCCTGCGGCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLISIAGWGPISRGP*AIEVQAIAVACGHS Trigger: GCTGTGGCCGCAGGCGACTGCAATGGCTTGGACTTCTATGGCCCAGGGCCCCCGGCTGATCGGCCCCCAGCCGGCGATGGAGATGAGGGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 |
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| CDS TCA 90 bp | ACCTGCACCATCGTCTCCTCCGCTGCCCGCTACATTCAGGCGGCCTaGGCCGTCCGGGCTGGCCTCCTCCTCGTCCTCCTCCTCGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TCTIVSSAARYIQAA*AVRAGLLLVLLLVL Trigger: AAGGACGAGGAGGAGGACGAGGAGGAGGCCAGCCCGGACGGCTCAGGCCGCCTGAATGTAGCGGGCAGCGGAGGAGACGATGGTGCAGGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 |
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| CDS GCA 90 bp | GTCGGCGCACACGTGGCTCACGGCCGGGATCTCCAGCAGCCGTGCTaGACTCAGGATGTCGCCCACATTGGCCGTGCTGACCGTGAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: VGAHVAHGRDLQQPC*TQDVAHIGRADRER Trigger: ACGCTCACGGTCAGCACGGCCAATGTGGGCGACATCCTGAGTGCAGCACGGCTGCTGGAGATCCCGGCCGTGAGCCACGTGTGCGCCGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 ENSMUST00000125261.2 |
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| CDS GCA 90 bp | GCTCTGGAGCGGCCTCAGAGAGAGCCGCCGCTTCTTCTTCACCGGTaGCAGCCCCTGCACGGCCATAGTGGCCGTTCTGTGTGGTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: ALERPQREPPLLLHR*QPLHGHSGRSVWWP Trigger: CGGCCACCACACAGAACGGCCACTATGGCCGTGCAGGGGCTGGCACCGGTGAAGAAGAAGCGGCGGCTCTCTCTGAGGCCGCTCCAGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 |
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| CDS GCA 90 bp | TGTCCCCGGCCCGGCCCACCGATGACATCATCTGCTGTAGCAGCGTaGTGGCCGCTAGCCCATCCACATCAGCGGCGTCCCCATCCTCGC | + |
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Preference number: 5 (lower is better) Translates to: CPRPGPPMTSSAVAA*WPLAHPHQRRPHPR Trigger: GCGAGGATGGGGACGCCGCTGATGTGGATGGGCTAGCGGCCAGCACGCTGCTACAGCAGATGATGTCATCGGTGGGCCGGGCCGGGGACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 |
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| CDS CCA 90 bp | AGAACTCCAGGTACTCCTTGGCACGCAGCAGGTTGCGCTGGTCAGTaGGGCCCGCCCCGTCGGGCTGGCTCGCGTCGCCCACATCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: RTPGTPWHAAGCAGQ*GPPRRAGSRRPHHQ Trigger: CTGATGATGTGGGCGACGCGAGCCAGCCCGACGGGGCGGGCCCCACTGACCAGCGCAACCTGCTGCGTGCCAAGGAGTACCTGGAGTTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 ENSMUST00000125261.2 |
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| CDS-3UTR CAA 90 bp | GGGCACCCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACTGCTTCTCCTGGCCATaGCGCGGGGCGTCCGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GHPTIVPKGSIHPKSSGHCFSWP*RGASGS Trigger: GCTCCCGGACGCCCCGCGCAATGGCCAGGAGAAGCA...GTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGGGTGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS TCA 90 bp | GCTTGCGGCCGCGGCGCGAGGGGACCCCATTGCAGCCGTCCTTCTTaGGGTGTCTGTGCAGATGGTCGGAGCGCACAAAGGTCTTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: ACGRGARGPHCSRPS*GVCADGRSAQRSCS Trigger: GCTGCAAGACCTTTGTGCGCTCCGACCATCTGCACAGACACCTCAAGAAGGACGGCTGCAATGGGGTCCCCTCGCGCCGCGGCCGCAAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 |
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| CDS GCA 90 bp | GACTCCTCATCACTGTCCCCGGCCCGGCCCACCGATGACATCATCTaGTGTAGCAGCGTGCTGGCCGCTAGCCCATCCACATCAGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: DSSSLSPARPTDDII*CSSVLAASPSTSAA Trigger: CGCCGCTGATGTGGATGGGCTAGCGGCCAGCACGCTGCTACAGCAGATGATGTCATCGGTGGGCCGGGCCGGGGACAGTGATGAGGAGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 |
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| CDS-3UTR CAA 90 bp | GGGCACCCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACTTGGCACGCAGCAGGTaGCGCTGGTCAGTGGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: GHPTIVPKGSIHPKSSGHLARSR*RWSVGP Trigger: GGGCCCCACTGACCAGCGCAACCTGCTGCGTGCCAA...GTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGGGTGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR CAA 90 bp | GTGGCCTGTGGCTCGGTCAATACCGGGCCTTTGGGGGAAGCCAGAGTTTGGGGTCGCGAGGGGACCCCATaGCAGCCGTCCTTCTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: VACGSVNTGPLGEARVWGREGTP*QPSFLR Trigger: CCTCAAGAAGGACGGCTGCAATGGGGTCCCCTCGCG...ACCCCAAACTCTGGCTTCCCCCAAAGGCCCGGTATTGACCGAGCCACAGGCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR CAA 90 bp | GGGCACCCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACAGGATGTCGCCCACATaGGCCGTGCTGACCGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: GHPTIVPKGSIHPKSSGHRMSPT*AVLTVS Trigger: GCTCACGGTCAGCACGGCCAATGTGGGCGACATCCT...GTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGGGTGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR CAA 90 bp | GCCCCTGCGTGGGACCCCTTGGTGGATGGGACGAGGGACACAGGAGCAGATGGGTTGCAGCCGTCCTTCTaGAGGTGTCTGTGCAGATGG | + |
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Preference number: 5 (lower is better) Translates to: APAWDPLVDGTRDTGADGLQPSF*RCLCRW Trigger: CCATCTGCACAGACACCTCAAGAAGGACGGCTGCAA...CCCATCTGCTCCTGTGTCCCTCGTCCCATCCACCAAGGGGTCCCACGCAGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS GCA 90 bp | CGGCGCGAGGGGACCCCATTGCAGCCGTCCTTCTTGAGGTGTCTGTaGAGATGGTCGGAGCGCACAAAGGTCTTGCAGCAGCTATCGCAC | + |
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Preference number: 5 (lower is better) Translates to: RREGTPLQPSFLRCL*RWSERTKVLQQLSH Trigger: GTGCGATAGCTGCTGCAAGACCTTTGTGCGCTCCGACCATCTGCACAGACACCTCAAGAAGGACGGCTGCAATGGGGTCCCCTCGCGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 |
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| CDS-3UTR CAA 90 bp | GCCCCTGCGTGGGACCCCTTGGTGGATGGGACGAGGGACACAGGAGCAGATGGGCACTTCTGGAAGGCCTaGGCCCGGATTTTCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: APAWDPLVDGTRDTGADGHFWKA*ARIFFS Trigger: TGAGAAGAAAATCCGGGCCAAGGCCTTCCAGAAGTG...CCCATCTGCTCCTGTGTCCCTCGTCCCATCCACCAAGGGGTCCCACGCAGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS-3UTR CAA 90 bp | GCCCCTGCGTGGGACCCCTTGGTGGATGGGACGAGGGACACAGGAGCAGATGGGATGTGCACCTTCAGCTaGTCCTGTCTGGTGAATCGA | + |
|
Preference number: 5 (lower is better) Translates to: APAWDPLVDGTRDTGADGMCTFS*SCLVNR Trigger: TCGATTCACCAGACAGGACAAGCTGAAGGTGCACAT...CCCATCTGCTCCTGTGTCCCTCGTCCCATCCACCAAGGGGTCCCACGCAGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS TCA 90 bp | AACTCACGTCCTTCCACAAGAATCACCACGTCGCAAAGCAGCCCCTaGGTCCGCTGCTCGTTCAGGCCGCTCAGGATGTCGCTGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: NSRPSTRITTSQSSP*VRCSFRPLRMSLLW Trigger: CCACAGCAGCGACATCCTGAGCGGCCTGAACGAGCAGCGGACTCAGGGGCTGCTTTGCGACGTGGTGATTCTTGTGGAAGGACGTGAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 ENSMUST00000125261.2 ENSMUST00000146895.2 |
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| CDS-3UTR CAA 90 bp | GGGCACCCTACCATAGTCCCCAAGGGCTCCATCCACCCCAAGTCTAGTGGCCACGACGTGAACAGCTTCTaGAAGTACTGGCTGCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GHPTIVPKGSIHPKSSGHDVNSF*KYWLQA Trigger: CGCCTGCAGCCAGTACTTCAAGAAGCTGTTCACGTC...GTGGCCACTAGACTTGGGGTGGATGGAGCCCTTGGGGACTATGGTAGGGTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048128.15 |
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| CDS CCA 90 bp | TGTGACGGGGCAGCTTGCCGGCACCCTGAATCACCTTCTCGCAGATaGGACACTTCTGGAAGGCCTTGGCCCGGATTTTCTTCTCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: CDGAACRHPESPSRR*DTSGRPWPGFSSHP Trigger: AGGGTGAGAAGAAAATCCGGGCCAAGGCCTTCCAGAAGTGTCCCATCTGCGAGAAGGTGATTCAGGGTGCCGGCAAGCTGCCCCGTCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 |
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| CDS-3UTR CAA 90 bp | GCGCTGGTACAGTGGCCACTCACATGGATGGAGCTCAAGTACAAGTCGAGAGGAAGGATGTCGCCCACATaGGCCGTGCTGACCGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ALVQWPLTWMELKYKSRGRMSPT*AVLTVS Trigger: GCTCACGGTCAGCACGGCCAATGTGGGCGACATCCT...TCCTCTCGACTTGTACTTGAGCTCCATCCATGTGAGTGGCCACTGTACCAGCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS-3UTR CAA 90 bp | TCGAGGCTCAGACATACGCACAGAGTGGAGGGATCTGGAGGACGTTGTGCGCAGGACGTGAACAGCTTCTaGAAGTACTGGCTGCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SRLRHTHRVEGSGGRCAQDVNSF*KYWLQA Trigger: CGCCTGCAGCCAGTACTTCAAGAAGCTGTTCACGTC...CTGCGCACAACGTCCTCCAGATCCCTCCACTCTGTGCGTATGTCTGAGCCTCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS TCA 90 bp | ACACTTCTGGAAGGCCTTGGCCCGGATTTTCTTCTCACCCTTCTGTaGCCAGGCTGGGTACACATCCCCCTCGTGGGCTCCACTGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: TLLEGLGPDFLLTLL*PGWVHIPLVGSTEV Trigger: TACTTCAGTGGAGCCCACGAGGGGGATGTGTACCCAGCCTGGTCACAGAAGGGTGAGAAGAAAATCCGGGCCAAGGCCTTCCAGAAGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 |
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| CDS GCA 90 bp | GCCGTCAGTGCCTCGGCACTCACGAAGTCGATCTCGTACACGTTCTaGTGGTCCACTACAGCTCCCGACGTGAACAGCTTCTTGAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: AVSASALTKSISYTF*WSTTAPDVNSFLKY Trigger: GTACTTCAAGAAGCTGTTCACGTCGGGAGCTGTAGTGGACCAGCAGAACGTGTACGAGATCGACTTCGTGAGTGCCGAGGCACTGACGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 ENSMUST00000125261.2 |
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| CDS-3UTR CAA 90 bp | TCAAGTACAAGTCGAGAGGACTGCACAGTGTCTGAAACCTCAGCATGGGAGAGGCACTTCTGGAAGGCCTaGGCCCGGATTTTCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSTSREDCTVSETSAWERHFWKA*ARIFFS Trigger: TGAGAAGAAAATCCGGGCCAAGGCCTTCCAGAAGTG...CCTCTCCCATGCTGAGGTTTCAGACACTGTGCAGTCCTCTCGACTTGTACTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121840.8 |
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| CDS GCA 72 bp | CCACCGCCGGGCCACCTGCACCATCGTCTCCTCCGCTaGCCGCTACATTCAGGCGGCCTGAGCCGTCCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PPPGHLHHRLLR*PLHSGGLSRPG Trigger: GCCCGGACGGCTCAGGCCGCCTGAATGTAGCGGGCAGCGGAGGAGACGATGGTGCAGGTGGCCCGGCGGTGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 |
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| CDS CCA 72 bp | GGTACTCCTTGGCACGCAGCAGGTTGCGCTGGTCAGTaGGGCCCGCCCCGTCGGGCTGGCTCGCGTCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GTPWHAAGCAGQ*GPPRRAGSRRP Trigger: TGGGCGACGCGAGCCAGCCCGACGGGGCGGGCCCCACTGACCAGCGCAACCTGCTGCGTGCCAAGGAGTACC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 ENSMUST00000125261.2 |
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| CDS CAA 90 bp | GGGTTACTGCGGAAGAACTCCAGGTACTCCTTGGCACGCAGCAGGTaGCGCTGGTCAGTGGGGCCCGCCCCGTCGGGCTGGCTCGCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: GLLRKNSRYSLARSR*RWSVGPAPSGWLAS Trigger: CGACGCGAGCCAGCCCGACGGGGCGGGCCCCACTGACCAGCGCAACCTGCTGCGTGCCAAGGAGTACCTGGAGTTCTTCCGCAGTAACCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 ENSMUST00000125261.2 |
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| CDS GCA 72 bp | GGAAGAACTCCAGGTACTCCTTGGCACGCAGCAGGTTaGGCTGGTCAGTGGGGCCCGCCCCGTCGGGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GRTPGTPWHAAG*AGQWGPPRRAG Trigger: GCCAGCCCGACGGGGCGGGCCCCACTGACCAGCGCAACCTGCTGCGTGCCAAGGAGTACCTGGAGTTCTTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 ENSMUST00000125261.2 |
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| CDS CCA 72 bp | TCCATCGCCGGCTGGGGGCCGATCAGCCGGGGGCCCTaGGCCATAGAAGTCCAAGCCATTGCAGTCGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SIAGWGPISRGP*AIEVQAIAVAC Trigger: GCAGGCGACTGCAATGGCTTGGACTTCTATGGCCCAGGGCCCCCGGCTGATCGGCCCCCAGCCGGCGATGGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 |
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| CDS CAA 72 bp | CGGAAGAACTCCAGGTACTCCTTGGCACGCAGCAGGTaGCGCTGGTCAGTGGGGCCCGCCCCGTCGGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RKNSRYSLARSR*RWSVGPAPSGW Trigger: CCAGCCCGACGGGGCGGGCCCCACTGACCAGCGCAACCTGCTGCGTGCCAAGGAGTACCTGGAGTTCTTCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 ENSMUST00000125261.2 |
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| CDS GCA 72 bp | GAGAGCCGCCGCTTCTTCTTCACCGGTGCCAGCCCCTaGACGGCCATAGTGGCCGTTCTGTGTGGTGGCCGG | + |
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Preference number: 6 (lower is better) Translates to: ESRRFFFTGASP*TAIVAVLCGGR Trigger: CCGGCCACCACACAGAACGGCCACTATGGCCGTGCAGGGGCTGGCACCGGTGAAGAAGAAGCGGCGGCTCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 |
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| CDS GCA 72 bp | GAAGTTACCCTCGGCGGTGGCCACCGCCGGGCCACCTaGACCATCGTCTCCTCCGCTGCCCGCTACATTCAG | + |
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Preference number: 6 (lower is better) Translates to: EVTLGGGHRRAT*TIVSSAARYIQ Trigger: CTGAATGTAGCGGGCAGCGGAGGAGACGATGGTGCAGGTGGCCCGGCGGTGGCCACCGCCGAGGGTAACTTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 |
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| CDS TCA 72 bp | TGGCTCGCGTCGCCCACATCATCAGCCGCCAGAATCTaGCGCTCCAGCAGGTCGGCGCACACGTGGCTCACG | + |
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Preference number: 6 (lower is better) Translates to: WLASPTSSAARI*RSSRSAHTWLT Trigger: CGTGAGCCACGTGTGCGCCGACCTGCTGGAGCGTCAGATTCTGGCGGCTGATGATGTGGGCGACGCGAGCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 ENSMUST00000125261.2 |
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| CDS GCA 72 bp | CACGTGGCTCACGGCCGGGATCTCCAGCAGCCGTGCTaGACTCAGGATGTCGCCCACATTGGCCGTGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: HVAHGRDLQQPC*TQDVAHIGRAD Trigger: GTCAGCACGGCCAATGTGGGCGACATCCTGAGTGCAGCACGGCTGCTGGAGATCCCGGCCGTGAGCCACGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 ENSMUST00000125261.2 |
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| CDS GCA 72 bp | GCACACGTGGCTCACGGCCGGGATCTCCAGCAGCCGTaGTGCACTCAGGATGTCGCCCACATTGGCCGTGCT | + |
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Preference number: 6 (lower is better) Translates to: AHVAHGRDLQQP*CTQDVAHIGRA Trigger: AGCACGGCCAATGTGGGCGACATCCTGAGTGCAGCACGGCTGCTGGAGATCCCGGCCGTGAGCCACGTGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 ENSMUST00000125261.2 |
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| CDS GCA 72 bp | CGGCCTCAGAGAGAGCCGCCGCTTCTTCTTCACCGGTaGCAGCCCCTGCACGGCCATAGTGGCCGTTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: RPQREPPLLLHR*QPLHGHSGRSV Trigger: CACAGAACGGCCACTATGGCCGTGCAGGGGCTGGCACCGGTGAAGAAGAAGCGGCGGCTCTCTCTGAGGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 |
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| CDS GCA 72 bp | CCCGGCCCACCGATGACATCATCTGCTGTAGCAGCGTaGTGGCCGCTAGCCCATCCACATCAGCGGCGTCCC | + |
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Preference number: 6 (lower is better) Translates to: PGPPMTSSAVAA*WPLAHPHQRRP Trigger: GGGACGCCGCTGATGTGGATGGGCTAGCGGCCAGCACGCTGCTACAGCAGATGATGTCATCGGTGGGCCGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 |
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| CDS GCA 72 bp | CTGGCCTCCTCCTCGTCCTCCTCCTCGTCCTTAAAGTaGTTCTCCTGGCCATTGCGCGGGGCGTCCGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: LASSSSSSSSLK*FSWPLRGASGS Trigger: GCTCCCGGACGCCCCGCGCAATGGCCAGGAGAAGCACTTTAAGGACGAGGAGGAGGACGAGGAGGAGGCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 |
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| CDS CAA 90 bp | GGCTTGCGGCCGCGGCGCGAGGGGACCCCATTGCAGCCGTCCTTCTaGAGGTGTCTGTGCAGATGGTCGGAGCGCACAAAGGTCTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: GLRPRREGTPLQPSF*RCLCRWSERTKVLQ Trigger: CTGCAAGACCTTTGTGCGCTCCGACCATCTGCACAGACACCTCAAGAAGGACGGCTGCAATGGGGTCCCCTCGCGCCGCGGCCGCAAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 |
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| CDS TCA 72 bp | CGCGGCGCGAGGGGACCCCATTGCAGCCGTCCTTCTTaGGGTGTCTGTGCAGATGGTCGGAGCGCACAAAGG | + |
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Preference number: 6 (lower is better) Translates to: RGARGPHCSRPS*GVCADGRSAQR Trigger: CCTTTGTGCGCTCCGACCATCTGCACAGACACCTCAAGAAGGACGGCTGCAATGGGGTCCCCTCGCGCCGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 |
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| CDS GCA 72 bp | TCACTGTCCCCGGCCCGGCCCACCGATGACATCATCTaGTGTAGCAGCGTGCTGGCCGCTAGCCCATCCACA | + |
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Preference number: 6 (lower is better) Translates to: SLSPARPTDDII*CSSVLAASPST Trigger: TGTGGATGGGCTAGCGGCCAGCACGCTGCTACAGCAGATGATGTCATCGGTGGGCCGGGCCGGGGACAGTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 |
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| CDS CCA 72 bp | GGCCCACCGATGACATCATCTGCTGTAGCAGCGTGCTaGCCGCTAGCCCATCCACATCAGCGGCGTCCCCAT | + |
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Preference number: 6 (lower is better) Translates to: GPPMTSSAVAAC*PLAHPHQRRPH Trigger: ATGGGGACGCCGCTGATGTGGATGGGCTAGCGGCCAGCACGCTGCTACAGCAGATGATGTCATCGGTGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 |
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| CDS CCA 72 bp | TCATGGGGTTACTGCGGAAGAACTCCAGGTACTCCTTaGCACGCAGCAGGTTGCGCTGGTCAGTGGGGCCCG | + |
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Preference number: 6 (lower is better) Translates to: SWGYCGRTPGTP*HAAGCAGQWGP Trigger: CGGGCCCCACTGACCAGCGCAACCTGCTGCGTGCCAAGGAGTACCTGGAGTTCTTCCGCAGTAACCCCATGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 ENSMUST00000125261.2 |
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| CDS TCA 72 bp | CCTTCCACAAGAATCACCACGTCGCAAAGCAGCCCCTaGGTCCGCTGCTCGTTCAGGCCGCTCAGGATGTCG | + |
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Preference number: 6 (lower is better) Translates to: PSTRITTSQSSP*VRCSFRPLRMS Trigger: CGACATCCTGAGCGGCCTGAACGAGCAGCGGACTCAGGGGCTGCTTTGCGACGTGGTGATTCTTGTGGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 ENSMUST00000125261.2 ENSMUST00000146895.2 |
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| CDS TCA 72 bp | GAAGGCCTTGGCCCGGATTTTCTTCTCACCCTTCTGTaGCCAGGCTGGGTACACATCCCCCTCGTGGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: EGLGPDFLLTLL*PGWVHIPLVGS Trigger: GGAGCCCACGAGGGGGATGTGTACCCAGCCTGGTCACAGAAGGGTGAGAAGAAAATCCGGGCCAAGGCCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 |
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| CDS CAA 72 bp | TTCATGGGGTTACTGCGGAAGAACTCCAGGTACTCCTaGGCACGCAGCAGGTTGCGCTGGTCAGTGGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: FMGLLRKNSRYS*ARSRLRWSVGP Trigger: GGGCCCCACTGACCAGCGCAACCTGCTGCGTGCCAAGGAGTACCTGGAGTTCTTCCGCAGTAACCCCATGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 ENSMUST00000125261.2 |
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| CDS GCA 72 bp | GGGACCCCATTGCAGCCGTCCTTCTTGAGGTGTCTGTaGAGATGGTCGGAGCGCACAAAGGTCTTGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: GTPLQPSFLRCL*RWSERTKVLQQ Trigger: CTGCTGCAAGACCTTTGTGCGCTCCGACCATCTGCACAGACACCTCAAGAAGGACGGCTGCAATGGGGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 |
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| CDS GCA 72 bp | GCCTCGGCACTCACGAAGTCGATCTCGTACACGTTCTaGTGGTCCACTACAGCTCCCGACGTGAACAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: ASALTKSISYTF*WSTTAPDVNSF Trigger: GAAGCTGTTCACGTCGGGAGCTGTAGTGGACCAGCAGAACGTGTACGAGATCGACTTCGTGAGTGCCGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 ENSMUST00000125261.2 |
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| CDS CCA 72 bp | GCAGCTTGCCGGCACCCTGAATCACCTTCTCGCAGATaGGACACTTCTGGAAGGCCTTGGCCCGGATTTTCT | + |
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Preference number: 6 (lower is better) Translates to: AACRHPESPSRR*DTSGRPWPGFS Trigger: AGAAAATCCGGGCCAAGGCCTTCCAGAAGTGTCCCATCTGCGAGAAGGTGATTCAGGGTGCCGGCAAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 |
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| CDS CCA 72 bp | CCATTGCAGCCGTCCTTCTTGAGGTGTCTGTGCAGATaGTCGGAGCGCACAAAGGTCTTGCAGCAGCTATCG | + |
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Preference number: 6 (lower is better) Translates to: PLQPSFLRCLCR*SERTKVLQQLS Trigger: CGATAGCTGCTGCAAGACCTTTGTGCGCTCCGACCATCTGCACAGACACCTCAAGAAGGACGGCTGCAATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 |
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| CDS CCA 72 bp | TCGGCACTCACGAAGTCGATCTCGTACACGTTCTGCTaGTCCACTACAGCTCCCGACGTGAACAGCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SALTKSISYTFC*STTAPDVNSFL Trigger: CAAGAAGCTGTTCACGTCGGGAGCTGTAGTGGACCAGCAGAACGTGTACGAGATCGACTTCGTGAGTGCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 ENSMUST00000125261.2 |
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| CDS CCA 72 bp | TCACCTTCTCGCAGATGGGACACTTCTGGAAGGCCTTaGCCCGGATTTTCTTCTCACCCTTCTGTGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: SPSRRWDTSGRP*PGFSSHPSVTR Trigger: CCTGGTCACAGAAGGGTGAGAAGAAAATCCGGGCCAAGGCCTTCCAGAAGTGTCCCATCTGCGAGAAGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 |
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| CDS CAA 72 bp | ATCACCTTCTCGCAGATGGGACACTTCTGGAAGGCCTaGGCCCGGATTTTCTTCTCACCCTTCTGTGACCAG | + |
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Preference number: 6 (lower is better) Translates to: ITFSQMGHFWKA*ARIFFSPFCDQ Trigger: CTGGTCACAGAAGGGTGAGAAGAAAATCCGGGCCAAGGCCTTCCAGAAGTGTCCCATCTGCGAGAAGGTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048128.15 ENSMUST00000117956.2 ENSMUST00000119606.8 ENSMUST00000121840.8 |
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