Pregenerated sensors for ZBTB48 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028952Ensembl transcript IDs: ENSMUST00000066715.11, ENSMUST00000131935.2, ENSMUST00000155389.8, ENSMUST00000156748.2
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCAGGACGCCAGGGCTAGCAAAGCTCTCCTCTGAACACAGTCTCTaGCTAGGGAGTTGGGAGGCAAGGCCACCCTGGGTCAGGGACTCC | + |
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Preference number: 1 (lower is better) Translates to: SRTPGLAKLSSEHSL*LGSWEARPPWVRDS Trigger: GGAGTCCCTGACCCAGGGTGGCCTTGCCTCCCAACTCCCTAGCCAGAGACTGTGTTCAGAGGAGAGCTTTGCTAGCCCTGGCGTCCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| 3UTR TCA 90 bp | GATGAGAGAGGGCTCCAGGACGCCAGGGCTAGCAAAGCTCTCCTCTaGACACAGTCTCTGGCTAGGGAGTTGGGAGGCAAGGCCACCCTG | + |
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Preference number: 1 (lower is better) Translates to: DERGLQDARASKALL*TQSLARELGGKATL Trigger: CAGGGTGGCCTTGCCTCCCAACTCCCTAGCCAGAGACTGTGTTCAGAGGAGAGCTTTGCTAGCCCTGGCGTCCTGGAGCCCTCTCTCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| 3UTR CCA 90 bp | GACACCATGTGCAAGCGCAGCTCCATCCTCCGTCGGAAGGTCTCCTaGCATACGGAGCATGTGAAGACCTGGCAGTGTGAGGGGCAAGCA | + |
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Preference number: 1 (lower is better) Translates to: DTMCKRSSILRRKVS*HTEHVKTWQCEGQA Trigger: TGCTTGCCCCTCACACTGCCAGGTCTTCACATGCTCCGTATGCCAGGAGACCTTCCGACGGAGGATGGAGCTGCGCTTGCACATGGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156748.2 |
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| 3UTR CCA 90 bp | GGGCTAGCAAAGCTCTCCTCTGAACACAGTCTCTGGCTAGGGAGTTaGGAGGCAAGGCCACCCTGGGTCAGGGACTCCACAATGACCTCA | + |
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Preference number: 1 (lower is better) Translates to: GLAKLSSEHSLWLGS*EARPPWVRDSTMTS Trigger: TGAGGTCATTGTGGAGTCCCTGACCCAGGGTGGCCTTGCCTCCCAACTCCCTAGCCAGAGACTGTGTTCAGAGGAGAGCTTTGCTAGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| 3UTR GCA 90 bp | CACTCGGTGCACTCGAACTTTCTCACACCTTTGTGTCGCCTGACGTaGACTCGTAACTGTTCCACAGCTTTGAAGGTCTTGCCACAGATC | + |
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Preference number: 1 (lower is better) Translates to: HSVHSNFLTPLCRLT*TRNCSTALKVLPQI Trigger: GATCTGTGGCAAGACCTTCAAAGCTGTGGAACAGTTACGAGTGCACGTCAGGCGACACAAAGGTGTGAGAAAGTTCGAGTGCACCGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAGCGGTGATGATGAGAGAGGGCTCCAGGACGCCAGGGCTAGCAAAGCTCTCTGGGGCCTGCCCTCTTaGTGGCGGCTGGCCACATGC | + |
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Preference number: 2 (lower is better) Translates to: SSGDDERGLQDARASKALWGLPS*WRLATC Trigger: GCATGTGGCCAGCCGCCATCAAGAGGGCAGGCCCCA...GAGAGCTTTGCTAGCCCTGGCGTCCTGGAGCCCTCTCTCATCATCACCGCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| 3UTR-3UTR TCA 90 bp | GCCATCCGGGCAGGGGTCTACGTGTCACAGTCCTCGGGAACAGCAGCGGTGATGATGTGCCTCCGCAGGTaGGCCTGCCGCGTGAACTTG | + |
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Preference number: 2 (lower is better) Translates to: AIRAGVYVSQSSGTAAVMMCLRR*ACRVNL Trigger: CAAGTTCACGCGGCAGGCTCACCTGCGGAGGCACAT...CATCACCGCTGCTGTTCCCGAGGACTGTGACACGTAGACCCCTGCCCGGATGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGGAGGCAAGGCCACCCTGGGTCAGGGACTCCACAATGACCTCAGCAGAGCCAGGTCTGCAGGGGGCTaGAGAGCCACGACCACCATC | + |
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Preference number: 2 (lower is better) Translates to: LGGKATLGQGLHNDLSRARSAGG*RATTTI Trigger: GATGGTGGTCGTGGCTCTCCAGCCCCCTGCAGACCT...GGCTCTGCTGAGGTCATTGTGGAGTCCCTGACCCAGGGTGGCCTTGCCTCCCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTGGGAGGCAAGGCCACCCTGGGTCAGGGACTCCACAATGACCTCAGCAGAGGGTGAGCCTGCCGCGTaGACTTGTAGCCACACTCGG | + |
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Preference number: 2 (lower is better) Translates to: SWEARPPWVRDSTMTSAEGEPAA*TCSHTR Trigger: CCGAGTGTGGCTACAAGTTCACGCGGCAGGCTCACC...CTCTGCTGAGGTCATTGTGGAGTCCCTGACCCAGGGTGGCCTTGCCTCCCAACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTGCAAGCGCAGCTCCATCCTCCGTCGGAAGGTCTCCTGGCATACGGAGCATGAAGACCTGGCAGTGTaGGGGGCAAGCAGGGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: MCKRSSILRRKVSWHTEHEDLAV*GASRAS Trigger: GCTGGCCCTGCTTGCCCCTCACACTGCCAGGTCTTC...ATGCTCCGTATGCCAGGAGACCTTCCGACGGAGGATGGAGCTGCGCTTGCACAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156748.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGCAGGGGGCTGGAGAGCCACGACCACCATCTTCTCATCCTCAATGATGAGGTGGCGGCTGGCCACATaGCTCAGAAGGGGGCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: SAGGWRATTTIFSSSMMRWRLAT*LRRGPF Trigger: GAAGGGCCCCCTTCTGAGGCATGTGGCCAGCCGCCA...CCTCATCATTGAGGATGAGAAGATGGTGGTCGTGGCTCTCCAGCCCCCTGCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGATTGTAGTTCTCCACTCTGTCGTGGATCTCCATGTGCCTCCGCAGGTGAGGGCAGAAGTGGGGCCTaGCCTCTTGATGGCGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: GDCSSPLCRGSPCASAGEGRSGA*PLDGGW Trigger: CCAGCCGCCATCAAGAGGGCAGGCCCCACTTCTGCC...CTCACCTGCGGAGGCACATGGAGATCCACGACAGAGTGGAGAACTACAATCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| 3UTR-3UTR GCA 90 bp | AGTTCTCCACTCTGTCGTGGATCTCCATGTGCCTCCGCAGGTGAGCCTGCCGCGTGTAGCCACACTCGGTaGACTCGAACTTTCTCACAC | + |
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Preference number: 2 (lower is better) Translates to: SSPLCRGSPCASAGEPAACSHTR*TRTFSH Trigger: GTGTGAGAAAGTTCGAGTGCACCGAGTGTGGCTACA...CGCGGCAGGCTCACCTGCGGAGGCACATGGAGATCCACGACAGAGTGGAGAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGGGGGCTGGAGAGCCACGACCACCATCTTCTCATCCTCAATGATGAGGTTCACTGTTCCACAGCTTTaGAGGTCTTGCCACAGATCT | + |
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Preference number: 2 (lower is better) Translates to: AGGWRATTTIFSSSMMRFTVPQL*RSCHRS Trigger: AGATCTGTGGCAAGACCTTCAAAGCTGTGGAACAGT...GAACCTCATCATTGAGGATGAGAAGATGGTGGTCGTGGCTCTCCAGCCCCCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| 3UTR TCA 72 bp | TCCTCCGTCGGAAGGTCTCCTGGCATACGGAGCATGTaGAGACCTGGCAGTGTGAGGGGCAAGCAGGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: SSVGRSPGIRSM*RPGSVRGKQGQ Trigger: CTGGCCCTGCTTGCCCCTCACACTGCCAGGTCTTCACATGCTCCGTATGCCAGGAGACCTTCCGACGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156748.2 |
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| 3UTR GCA 72 bp | CTCCACAATGACCTCAGCAGAGCCCACCTCCAGGTCTaGAGGGGGCTGGAGAGCCACGACCACCATCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: LHNDLSRAHLQV*RGLESHDHHLL Trigger: GAGAAGATGGTGGTCGTGGCTCTCCAGCCCCCTGCAGACCTGGAGGTGGGCTCTGCTGAGGTCATTGTGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| 3UTR-3UTR CAA 90 bp | CTAGCAAAGCTCTCCTCTGAACACAGTCTCTGGCTAGGGAGTTGGGAGGCAAGGGTGGGGCCTGCCCTCTaGATGGCGGCTGGCCACATG | + |
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Preference number: 3 (lower is better) Translates to: LAKLSSEHSLWLGSWEARVGPAL*MAAGHM Trigger: CATGTGGCCAGCCGCCATCAAGAGGGCAGGCCCCAC...CCTTGCCTCCCAACTCCCTAGCCAGAGACTGTGTTCAGAGGAGAGCTTTGCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| 3UTR CCA 72 bp | CCAGGGCTAGCAAAGCTCTCCTCTGAACACAGTCTCTaGCTAGGGAGTTGGGAGGCAAGGCCACCCTGGGTC | + |
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Preference number: 3 (lower is better) Translates to: PGLAKLSSEHSL*LGSWEARPPWV Trigger: GACCCAGGGTGGCCTTGCCTCCCAACTCCCTAGCCAGAGACTGTGTTCAGAGGAGAGCTTTGCTAGCCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| 3UTR CCA 72 bp | TGCAAGCGCAGCTCCATCCTCCGTCGGAAGGTCTCCTaGCATACGGAGCATGTGAAGACCTGGCAGTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: CKRSSILRRKVS*HTEHVKTWQCE Trigger: CTCACACTGCCAGGTCTTCACATGCTCCGTATGCCAGGAGACCTTCCGACGGAGGATGGAGCTGCGCTTGCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156748.2 |
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| 3UTR-3UTR CAA 90 bp | CCTCCGCAGGTGAGCCTGCCGCGTGAACTTGTAGCCACACTCGGTGCACTCGAAACAGCTTTGAAGGTCTaGCCACAGATCTGGCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: PPQVSLPRELVATLGALETALKV*PQIWQK Trigger: CTTCTGCCAGATCTGTGGCAAGACCTTCAAAGCTGT...TTCGAGTGCACCGAGTGTGGCTACAAGTTCACGCGGCAGGCTCACCTGCGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| 3UTR-3UTR CAA 90 bp | AGCAGCGGTGATGATGAGAGAGGGCTCCAGGACGCCAGGGCTAGCAAAGCTCTCAACTGTTCCACAGCTTaGAAGGTCTTGCCACAGATC | + |
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Preference number: 3 (lower is better) Translates to: SSGDDERGLQDARASKALNCSTA*KVLPQI Trigger: GATCTGTGGCAAGACCTTCAAAGCTGTGGAACAGTT...GAGAGCTTTGCTAGCCCTGGCGTCCTGGAGCCCTCTCTCATCATCACCGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| 3UTR-3UTR CAA 90 bp | ACGCCAGGGCTAGCAAAGCTCTCCTCTGAACACAGTCTCTGGCTAGGGAGTTGGAACTTTCTCACACCTTaGTGTCGCCTGACGTGCACT | + |
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Preference number: 3 (lower is better) Translates to: TPGLAKLSSEHSLWLGSWNFLTP*CRLTCT Trigger: AGTGCACGTCAGGCGACACAAAGGTGTGAGAAAGTT...CCAACTCCCTAGCCAGAGACTGTGTTCAGAGGAGAGCTTTGCTAGCCCTGGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | CAGTGGGGCCATCCGGGCAGGGGTCTACGTGTCACAGTCCTCGGGAACAGCAGCCGGCTCGAGGCCCGGTaGCCGCATTCCTCACACACA | + |
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Preference number: 4 (lower is better) Translates to: QWGHPGRGLRVTVLGNSSRLEAR*PHSSHT Trigger: TGTGTGTGAGGAATGCGGGCACCGGGCCTCGAGCCG...GCTGCTGTTCCCGAGGACTGTGACACGTAGACCCCTGCCCGGATGGCCCCACTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | GCCATCCGGGCAGGGGTCTACGTGTCACAGTCCTCGGGAACAGCAGCGGTGATGGCATCTGCAGTCCGTTaGGGCTCGAGGCCCGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: AIRAGVYVSQSSGTAAVMASAVR*GSRPGA Trigger: GGCACCGGGCCTCGAGCCGCAACGGACTGCAGATGC...CATCACCGCTGCTGTTCCCGAGGACTGTGACACGTAGACCCCTGCCCGGATGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | ACACCATGTGCAAGCGCAGCTCCATCCTCCGTCGGAAGGTCTCCTGGCATACGGGGGAGGGCCTCTGCCTaGGACGGCAGCCTCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: TPCASAAPSSVGRSPGIRGRASA*DGSLCR Trigger: CCTGCAGAGGCTGCCGTCGCAGGCAGAGGCCCTCCC...CCGTATGCCAGGAGACCTTCCGACGGAGGATGGAGCTGCGCTTGCACATGGTGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156748.2 |
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| CDS-3UTR TCA 90 bp | ACAGATCTGGCAGAAGTGGGGCCTGCCCTCTTGATGGCGGCTGGCCACATGCCTCTGATCCCTGTTCCCTaGGGTGAGGGCGAGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: TDLAEVGPALLMAAGHMPLIPVP*GEGEVA Trigger: GGCCACCTCGCCCTCACCTCAGGGAACAGGGATCAG...AGGCATGTGGCCAGCCGCCATCAAGAGGGCAGGCCCCACTTCTGCCAGATCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR TCA 90 bp | AGTTCTCCACTCTGTCGTGGATCTCCATGTGCCTCCGCAGGTGAGCCTGCCGCGGGCACTGCAGGTGGGTaGGACAGGCAGAGGGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: SSPLCRGSPCASAGEPAAGTAGG*DRQREH Trigger: GTGCTCCCTCTGCCTGTCTCACCCACCTGCAGTGCC...CGCGGCAGGCTCACCTGCGGAGGCACATGGAGATCCACGACAGAGTGGAGAACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | AGTTCTCCACTCTGTCGTGGATCTCCATGTGCCTCCGCAGGTGAGCCTGCCGCGGCCAGGACACTCCAGTaGGCCTTGAACACCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: SSPLCRGSPCASAGEPAAARTLQ*ALNTRP Trigger: GGGCCTGGTGTTCAAGGCGCACTGGAGTGTCCTGGC...CGCGGCAGGCTCACCTGCGGAGGCACATGGAGATCCACGACAGAGTGGAGAACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | TCACAGTCCTCGGGAACAGCAGCGGTGATGATGAGAGAGGGCTCCAGGACGCCACTGGGAGGACAACGCTaGCCCCTGTGCCATCCCCGT | + |
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Preference number: 4 (lower is better) Translates to: SQSSGTAAVMMREGSRTPLGGQR*PLCHPR Trigger: ACGGGGATGGCACAGGGGGCAGCGTTGTCCTCCCAG...TGGCGTCCTGGAGCCCTCTCTCATCATCACCGCTGCTGTTCCCGAGGACTGTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR CCA 90 bp | CTCGGGAACAGCAGCGGTGATGATGAGAGAGGGCTCCAGGACGCCAGGGCTAGCGTGGCGTCGCAATACTaGCCCTTCTCGCGCTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LGNSSGDDERGLQDARASVASQY*PFSRCL Trigger: CAAGCAGCGCGAGAAGGGCCAGTATTGCGACGCCAC...GCTAGCCCTGGCGTCCTGGAGCCCTCTCTCATCATCACCGCTGCTGTTCCCGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR CCA 90 bp | CCTCCGCAGGTGAGCCTGCCGCGTGAACTTGTAGCCACACTCGGTGCACTCGAACCCCCACGTCCAGTGTaGCGTCGCAATACTGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: PPQVSLPRELVATLGALEPPRPV*RRNTGP Trigger: AGGGCCAGTATTGCGACGCCACACTGGACGTGGGGG...TTCGAGTGCACCGAGTGTGGCTACAAGTTCACGCGGCAGGCTCACCTGCGGAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR CCA 90 bp | AGCAGCGGTGATGATGAGAGAGGGCTCCAGGACGCCAGGGCTAGCAAAGCTCTCACCCGCACCCAGGGCTaGCTCGGCTGCACAGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: SSGDDERGLQDARASKALTRTQG*LGCTGF Trigger: AAACCCTGTGCAGCCGAGCCAGCCCTGGGTGCGGGT...GAGAGCTTTGCTAGCCCTGGCGTCCTGGAGCCCTCTCTCATCATCACCGCTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR CCA 90 bp | CTCCCCTGTGTGAGACACCATGTGCAAGCGCAGCTCCATCCTCCGTCGGAAGGTACCCGCACCCAGGGCTaGCTCGGCTGCACAGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: LPCVRHHVQAQLHPPSEGTRTQG*LGCTGF Trigger: AAACCCTGTGCAGCCGAGCCAGCCCTGGGTGCGGGT...ACCTTCCGACGGAGGATGGAGCTGCGCTTGCACATGGTGTCTCACACAGGGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156748.2 |
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| CDS-3UTR TCA 90 bp | AGGGAGTTGGGAGGCAAGGCCACCCTGGGTCAGGGACTCCACAATGACCTCAGCGGCATCTCCCCTGTGTaGGACACCATGTGCAAGCGC | + |
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Preference number: 4 (lower is better) Translates to: RELGGKATLGQGLHNDLSGISPV*DTMCKR Trigger: GCGCTTGCACATGGTGTCTCACACAGGGGAGATGCC...GCTGAGGTCATTGTGGAGTCCCTGACCCAGGGTGGCCTTGCCTCCCAACTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | AGCAGCGGTGATGATGAGAGAGGGCTCCAGGACGCCAGGGCTAGCAAAGCTCTCGTACCCAGCTGGGGCTaGTCAGTGTCTCTGGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SSGDDERGLQDARASKALVPSWG*SVSLGS Trigger: GGAGCCCAGAGACACTGAGCAGCCCCAGCTGGGTAC...GAGAGCTTTGCTAGCCCTGGCGTCCTGGAGCCCTCTCTCATCATCACCGCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | CAGTGGGGCCATCCGGGCAGGGGTCTACGTGTCACAGTCCTCGGGAACAGCAGCGGTTTAGGGGCTCCGTaGAGCTTGATCATGTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: QWGHPGRGLRVTVLGNSSGLGAP*SLIMWL Trigger: GAGCCACATGATCAAGCTGCACGGAGCCCCTAAACC...GCTGCTGTTCCCGAGGACTGTGACACGTAGACCCCTGCCCGGATGGCCCCACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | GAGCCCACCTCCAGGTCTGCAGGGGGCTGGAGAGCCACGACCACCATCTTCTCATCTCGCCCGTGTGGGTaGGGTTGTGCTTGTCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: EPTSRSAGGWRATTTIFSSRPCG*GCACPN Trigger: GTTTGGACAAGCACAACCGCACCCACACGGGCGAGA...TGAGAAGATGGTGGTCGTGGCTCTCCAGCCCCCTGCAGACCTGGAGGTGGGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR CCA 90 bp | CCTCCGCAGGTGAGCCTGCCGCGTGAACTTGTAGCCACACTCGGTGCACTCGAAGCTGCTCAGTGTCTCTaGGCTCCTGATCCACGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PPQVSLPRELVATLGALEAAQCL*APDPRR Trigger: CCTCCGTGGATCAGGAGCCCAGAGACACTGAGCAGC...TTCGAGTGCACCGAGTGTGGCTACAAGTTCACGCGGCAGGCTCACCTGCGGAGG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR TCA 90 bp | CCGGGCAGGGGTCTACGTGTCACAGTCCTCGGGAACAGCAGCGGTGATGATGAGGCTGCCAAGAGTACCTaGTCCCTGTTCCCTGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: PGRGLRVTVLGNSSGDDEAAKST*SLFPEV Trigger: CACCTCAGGGAACAGGGATCAGGTACTCTTGGCAGC...CTCATCATCACCGCTGCTGTTCCCGAGGACTGTGACACGTAGACCCCTGCCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR TCA 90 bp | GCTGGCCACATGCCTCAGAAGGGGGCCCTTCTCAGTGAAGCGCTGCTCACAGAACTGTGCCTGTCCCACTaGGGTTTGGGGCTGGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: AGHMPQKGALLSEALLTELCLSH*GLGLEA Trigger: AGCTTCCAGCCCCAAACCTCAGTGGGACAGGCACAG...TTCTGTGAGCAGCGCTTCACTGAGAAGGGCCCCCTTCTGAGGCATGTGGCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR TCA 90 bp | CCGGGCAGGGGTCTACGTGTCACAGTCCTCGGGAACAGCAGCGGTGATGATGAGGGTTGGCCTTCTGGGTaGAGGCATGGCTGCAGAACT | + |
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Preference number: 4 (lower is better) Translates to: PGRGLRVTVLGNSSGDDEGWPSG*RHGCRT Trigger: AGTTCTGCAGCCATGCCTTCACCCAGAAGGCCAACC...CTCATCATCACCGCTGCTGTTCCCGAGGACTGTGACACGTAGACCCCTGCCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | CCGGGCAGGGGTCTACGTGTCACAGTCCTCGGGAACAGCAGCGGTGATGATGAGGCCTTGATGTGCATCTaGAGTCCGTTGCGGCTCGAG | + |
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Preference number: 4 (lower is better) Translates to: PGRGLRVTVLGNSSGDDEALMCI*SPLRLE Trigger: CTCGAGCCGCAACGGACTGCAGATGCACATCAAGGC...CTCATCATCACCGCTGCTGTTCCCGAGGACTGTGACACGTAGACCCCTGCCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | GAGCCCACCTCCAGGTCTGCAGGGGGCTGGAGAGCCACGACCACCATCTTCTCATGCTTGGCCTTGATGTaGATCTGCAGTCCGTTGCGG | + |
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Preference number: 4 (lower is better) Translates to: EPTSRSAGGWRATTTIFSCLALM*ICSPLR Trigger: CCGCAACGGACTGCAGATGCACATCAAGGCCAAGCA...TGAGAAGATGGTGGTCGTGGCTCTCCAGCCCCCTGCAGACCTGGAGGTGGGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR CCA 90 bp | CCTCCGCAGGTGAGCCTGCCGCGTGAACTTGTAGCCACACTCGGTGCACTCGAAGTCGGCTCCTTCAGGTaGCTTTTCACGTCCTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: PPQVSLPRELVATLGALEVGSFR*LFTSWE Trigger: CTCCCAGGACGTGAAAAGCCACCTGAAGGAGCCGAC...TTCGAGTGCACCGAGTGTGGCTACAAGTTCACGCGGCAGGCTCACCTGCGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | CCGGGCAGGGGTCTACGTGTCACAGTCCTCGGGAACAGCAGCGGTGATGATGAGTGGCCCTTCTCGCGCTaGTTGTTGAGTTCCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: PGRGLRVTVLGNSSGDDEWPFSR*LLSSCR Trigger: TCTGCAGGAACTCAACAAGCAGCGCGAGAAGGGCCA...CTCATCATCACCGCTGCTGTTCCCGAGGACTGTGACACGTAGACCCCTGCCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | GCAAGGCCACCCTGGGTCAGGGACTCCACAATGACCTCAGCAGAGCCCACCTCCGCCTTGGGGGCTCTTTaGAGTCCTCAGACTCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: ARPPWVRDSTMTSAEPTSALGAL*SPQTLC Trigger: ACAAAGAGTCTGAGGACTGCAAAGAGCCCCCAAGGC...GGAGGTGGGCTCTGCTGAGGTCATTGTGGAGTCCCTGACCCAGGGTGGCCTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | ACAGATCTGGCAGAAGTGGGGCCTGCCCTCTTGATGGCGGCTGGCCACATGCCTCAGGGCTGGCTCGGCTaGACAGGGTTTTCTAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: TDLAEVGPALLMAAGHMPQGWLG*TGFSNH Trigger: GTGATTAGAAAACCCTGTGCAGCCGAGCCAGCCCTG...AGGCATGTGGCCAGCCGCCATCAAGAGGGCAGGCCCCACTTCTGCCAGATCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR CCA 90 bp | CAGTGGGGCCATCCGGGCAGGGGTCTACGTGTCACAGTCCTCGGGAACAGCAGCTTCTGCATGAACTGCTaGGAGCAGGAGGAACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: QWGHPGRGLRVTVLGNSSFCMNC*EQEEHL Trigger: CAAGTGTTCCTCCTGCTCCCAGCAGTTCATGCAGAA...GCTGCTGTTCCCGAGGACTGTGACACGTAGACCCCTGCCCGGATGGCCCCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR CCA 90 bp | ACAGATCTGGCAGAAGTGGGGCCTGCCCTCTTGATGGCGGCTGGCCACATGCCTTTGAGGTTGGCCTTCTaGGTGAAGGCATGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TDLAEVGPALLMAAGHMPLRLAF*VKAWLQ Trigger: CTGCAGCCATGCCTTCACCCAGAAGGCCAACCTCAA...AGGCATGTGGCCAGCCGCCATCAAGAGGGCAGGCCCCACTTCTGCCAGATCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR TCA 90 bp | CGCCTGACGTGCACTCGTAACTGTTCCACAGCTTTGAAGGTCTTGCCACAGATCCCCTGTTCCCTGAGGTaGGGGCGAGGTGGCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLTCTRNCSTALKVLPQIPCSLR*GRGGQC Trigger: ACACTGGCCACCTCGCCCTCACCTCAGGGAACAGGG...GATCTGTGGCAAGACCTTCAAAGCTGTGGAACAGTTACGAGTGCACGTCAGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | GCATCTCCCCTGTGTGAGACACCATGTGCAAGCGCAGCTCCATCCTCCGTCGGACAGGGCTGGCTCGGCTaGACAGGGTTTTCTAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASPLCETPCASAAPSSVGQGWLG*TGFSNH Trigger: GTGATTAGAAAACCCTGTGCAGCCGAGCCAGCCCTG...TCCGACGGAGGATGGAGCTGCGCTTGCACATGGTGTCTCACACAGGGGAGATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156748.2 |
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| CDS-3UTR GCA 90 bp | AGTTCTCCACTCTGTCGTGGATCTCCATGTGCCTCCGCAGGTGAGCCTGCCGCGTTCGACCGGAACGGCTaGACCTTTTCTGCTGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSPLCRGSPCASAGEPAAFDRNG*TFSAVS Trigger: ACTGACAGCAGAAAAGGTGCAGCCGTTCCGGTCGAA...CGCGGCAGGCTCACCTGCGGAGGCACATGGAGATCCACGACAGAGTGGAGAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR TCA 90 bp | CTTCTCATCCTCAATGATGAGGTTCCGGAGCTTGCGCTGCCGGGGATTGTAGTTTCCTGGGAGGCAGGTTaGCCCAGTCCACTCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLILNDEVPELALPGIVVSWEAG*PSPLCA Trigger: GGCACAGAGTGGACTGGGTCAACCTGCCTCCCAGGA...AACTACAATCCCCGGCAGCGCAAGCTCCGGAACCTCATCATTGAGGATGAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCCACCTCCAGGTCTGCAGGGGGCTGGAGAGCCACGACCACCATCTTCTCACTGAGGAACTTTTTGTaGCATGTGGGACATTCGACC | + |
|
Preference number: 4 (lower is better) Translates to: EPTSRSAGGWRATTTIFSLRNFL*HVGHST Trigger: GGTCGAATGTCCCACATGTCACAAAAAGTTCCTCAG...TGAGAAGATGGTGGTCGTGGCTCTCCAGCCCCCTGCAGACCTGGAGGTGGGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
||
| CDS-3UTR TCA 90 bp | ACGCCAGGGCTAGCAAAGCTCTCCTCTGAACACAGTCTCTGGCTAGGGAGTTGGGGGCTCCGTGCAGCTTaGTCATGTGGCTCTGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TPGLAKLSSEHSLWLGSWGLRAA*SCGSAS Trigger: ACTTGCAGAGCCACATGATCAAGCTGCACGGAGCCC...CCAACTCCCTAGCCAGAGACTGTGTTCAGAGGAGAGCTTTGCTAGCCCTGGCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
||
| CDS-3UTR GCA 90 bp | ACGCCAGGGCTAGCAAAGCTCTCCTCTGAACACAGTCTCTGGCTAGGGAGTTGGCAACGCTGCCCCCTGTaGCATCCCCGTAGATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPGLAKLSSEHSLWLGSWQRCPL*HPRRFS Trigger: AGAGAATCTACGGGGATGGCACAGGGGGCAGCGTTG...CCAACTCCCTAGCCAGAGACTGTGTTCAGAGGAGAGCTTTGCTAGCCCTGGCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
||
| CDS-3UTR GCA 90 bp | AGTGCTAAGTCACATGTTTATTGGTCAGTGGGGCCATCCGGGCAGGGGTCTACGGCACAAGTGGGGCACTaGAGGTGGGTGAGACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SAKSHVYWSVGPSGQGSTAQVGH*RWVRQA Trigger: TGCCTGTCTCACCCACCTGCAGTGCCCCACTTGTGC...CGTAGACCCCTGCCCGGATGGCCCCACTGACCAATAAACATGTGACTTAGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
||
| CDS-3UTR TCA 90 bp | AGGTCTGCAGGGGGCTGGAGAGCCACGACCACCATCTTCTCATCCTCAATGATGTCTCGCGCTGCTTGTTaGGTTCCTGCAGAACCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSAGGWRATTTIFSSSMMSRAAC*VPAEPS Trigger: TGAGGGTTCTGCAGGAACTCAACAAGCAGCGCGAGA...CATCATTGAGGATGAGAAGATGGTGGTCGTGGCTCTCCAGCCCCCTGCAGACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR TCA 90 bp | AGTTCTCCACTCTGTCGTGGATCTCCATGTGCCTCCGCAGGTGAGCCTGCCGCGTGTGAAGACCTGTTCTaGGCGGTTCATGCAATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSPLCRGSPCASAGEPAACEDLF*AVHAIP Trigger: AGGAATTGCATGAACCGCTCAGAACAGGTCTTCACA...CGCGGCAGGCTCACCTGCGGAGGCACATGGAGATCCACGACAGAGTGGAGAACT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR TCA 90 bp | ACGCCAGGGCTAGCAAAGCTCTCCTCTGAACACAGTCTCTGGCTAGGGAGTTGGTCCTGTGCTTGGCCTTaGTGTGCATCTGCAGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TPGLAKLSSEHSLWLGSWSCAWP*CASAVR Trigger: ACGGACTGCAGATGCACATCAAGGCCAAGCACAGGA...CCAACTCCCTAGCCAGAGACTGTGTTCAGAGGAGAGCTTTGCTAGCCCTGGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | CTGCCGGGGATTGTAGTTCTCCACTCTGTCGTGGATCTCCATGTGCCTCCGCAGTGCTTGTTGAGTTCCTaGAGAACCCTCACGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPGIVVLHSVVDLHVPPQCLLSS*RTLTLC Trigger: GCACAGCGTGAGGGTTCTGCAGGAACTCAACAAGCA...CTGCGGAGGCACATGGAGATCCACGACAGAGTGGAGAACTACAATCCCCGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | AGCTCCATCCTCCGTCGGAAGGTCTCCTGGCATACGGAGCATGTGAAGACCTGGTTCGACCGGAACGGCTaGACCTTTTCTGCTGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSILRRKVSWHTEHVKTWFDRNG*TFSAVS Trigger: ACTGACAGCAGAAAAGGTGCAGCCGTTCCGGTCGAA...CCAGGTCTTCACATGCTCCGTATGCCAGGAGACCTTCCGACGGAGGATGGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156748.2 |
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| CDS-3UTR GCA 90 bp | CTCCACTCTGTCGTGGATCTCCATGTGCCTCCGCAGGTGAGCCTGCCGCGTGAAAGCTTTTCTCCACGATaGTTAAAAGCCTCGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHSVVDLHVPPQVSLPRESFSPR*LKASCS Trigger: GCTGCACGAGGCTTTTAAGCATCGTGGAGAAAAGCT...TTCACGCGGCAGGCTCACCTGCGGAGGCACATGGAGATCCACGACAGAGTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | TCACAGTCCTCGGGAACAGCAGCGGTGATGATGAGAGAGGGCTCCAGGACGCCAGGCCTTTCATTCCTGTaGTTGGCCTTGATGTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SQSSGTAAVMMREGSRTPGLSFL*LALMCI Trigger: GATGCACATCAAGGCCAAGCACAGGAATGAAAGGCC...TGGCGTCCTGGAGCCCTCTCTCATCATCACCGCTGCTGTTCCCGAGGACTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | GAGCTTGCGCTGCCGGGGATTGTAGTTCTCCACTCTGTCGTGGATCTCCATGTGGTGTGGGTGCGGTTGTaGTTGTCCAAACTTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ELALPGIVVLHSVVDLHVVWVRL*LSKLGC Trigger: GCACCCAAGTTTGGACAAGCACAACCGCACCCACAC...CACATGGAGATCCACGACAGAGTGGAGAACTACAATCCCCGGCAGCGCAAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR CCA 90 bp | GAGCTTGCGCTGCCGGGGATTGTAGTTCTCCACTCTGTCGTGGATCTCCATGTGGTCTTCCCACAGAGGTaGCACTGGAAAGGCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ELALPGIVVLHSVVDLHVVFPQR*HWKGFS Trigger: CGAGAAGCCTTTCCAGTGCCACCTCTGTGGGAAGAC...CACATGGAGATCCACGACAGAGTGGAGAACTACAATCCCCGGCAGCGCAAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR TCA 90 bp | GTGCAAGCGCAGCTCCATCCTCCGTCGGAAGGTCTCCTGGCATACGGAGCATGTCTGAGGAACTTTTTGTaGCATGTGGGACATTCGACC | + |
|
Preference number: 4 (lower is better) Translates to: VQAQLHPPSEGLLAYGACLRNFL*HVGHST Trigger: GGTCGAATGTCCCACATGTCACAAAAAGTTCCTCAG...ACATGCTCCGTATGCCAGGAGACCTTCCGACGGAGGATGGAGCTGCGCTTGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156748.2 |
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| CDS-3UTR TCA 90 bp | ACGCCAGGGCTAGCAAAGCTCTCCTCTGAACACAGTCTCTGGCTAGGGAGTTGGAGTCTTTCTTCTGCATaGACTGCTGGGAGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPGLAKLSSEHSLWLGSWSLSSA*TAGSRR Trigger: CCTCCTGCTCCCAGCAGTTCATGCAGAAGAAAGACT...CCAACTCCCTAGCCAGAGACTGTGTTCAGAGGAGAGCTTTGCTAGCCCTGGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | ACAGATCTGGCAGAAGTGGGGCCTGCCCTCTTGATGGCGGCTGGCCACATGCCTGTTCTGAGCGGTTCATaGAATTCCTGGCTTCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: TDLAEVGPALLMAAGHMPVLSGS*NSWLHV Trigger: AACATGAAGCCAGGAATTGCATGAACCGCTCAGAAC...AGGCATGTGGCCAGCCGCCATCAAGAGGGCAGGCCCCACTTCTGCCAGATCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | CTGCCGGGGATTGTAGTTCTCCACTCTGTCGTGGATCTCCATGTGCCTCCGCAGTTCTTCTGCATGAACTaGTGGGAGCAGGAGGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LPGIVVLHSVVDLHVPPQFFCMN*WEQEEH Trigger: GTGTTCCTCCTGCTCCCAGCAGTTCATGCAGAAGAA...CTGCGGAGGCACATGGAGATCCACGACAGAGTGGAGAACTACAATCCCCGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | CTAGCAAAGCTCTCCTCTGAACACAGTCTCTGGCTAGGGAGTTGGGAGGCAAGGGAAGGCTTCAAAGCCTaGGTGAGTTTCCCACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAKLSSEHSLWLGSWEAREGFKA*VSFPQR Trigger: CCTCTGTGGGAAACTCACGCAGGCTTTGAAGCCTTC...CCTTGCCTCCCAACTCCCTAGCCAGAGACTGTGTTCAGAGGAGAGCTTTGCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR CCA 90 bp | AGCTCCATCCTCCGTCGGAAGGTCTCCTGGCATACGGAGCATGTGAAGACCTGGACTTTTTGTGACATGTaGGACATTCGACCGGAACGG | + |
|
Preference number: 4 (lower is better) Translates to: SSILRRKVSWHTEHVKTWTFCDM*DIRPER Trigger: CCGTTCCGGTCGAATGTCCCACATGTCACAAAAAGT...CCAGGTCTTCACATGCTCCGTATGCCAGGAGACCTTCCGACGGAGGATGGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156748.2 |
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| CDS-3UTR TCA 90 bp | AGTGCTAAGTCACATGTTTATTGGTCAGTGGGGCCATCCGGGCAGGGGTCTACGAGACTCTTTGTCCTCTaGGGGAGAAGGCTTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SAKSHVYWSVGPSGQGSTRLFVL*GRRLQS Trigger: GCTTTGAAGCCTTCTCCCTCAGAGGACAAAGAGTCT...CGTAGACCCCTGCCCGGATGGCCCCACTGACCAATAAACATGTGACTTAGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | TTTCTCACACCTTTGTGTCGCCTGACGTGCACTCGTAACTGTTCCACAGCTTTGAGAACCCTCACGCTGTaGTGCACGAAGGAACCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLTPLCRLTCTRNCSTALRTLTL*CTKEPS Trigger: GGACGGTTCCTTCGTGCAGCACAGCGTGAGGGTTCT...CAAAGCTGTGGAACAGTTACGAGTGCACGTCAGGCGACACAAAGGTGTGAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | CTGTGTGAGACACCATGTGCAAGCGCAGCTCCATCCTCCGTCGGAAGGTCTCCTGTTCTGAGCGGTTCATaGAATTCCTGGCTTCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: LCETPCASAAPSSVGRSPVLSGS*NSWLHV Trigger: AACATGAAGCCAGGAATTGCATGAACCGCTCAGAAC...AGGAGACCTTCCGACGGAGGATGGAGCTGCGCTTGCACATGGTGTCTCACACAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156748.2 |
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| CDS-3UTR CCA 90 bp | TCTGCAGGGGGCTGGAGAGCCACGACCACCATCTTCTCATCCTCAATGATGAGGATTCTCTGGAAGAAATaGCTGCAACACGCCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: SAGGWRATTTIFSSSMMRILWKK*LQHART Trigger: TGTCCTGGCGTGTTGCAGCCATTTCTTCCAGAGAAT...CCTCATCATTGAGGATGAGAAGATGGTGGTCGTGGCTCTCCAGCCCCCTGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR CCA 90 bp | ATGTGCAAGCGCAGCTCCATCCTCCGTCGGAAGGTCTCCTGGCATACGGAGCATCTTTTGACTTCCTTCTaGTTAGCACAGTCTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MCKRSSILRRKVSWHTEHLLTSF*LAQSQA Trigger: AGCCTGAGACTGTGCTAACCAGAAGGAAGTCAAAAG...ATGCTCCGTATGCCAGGAGACCTTCCGACGGAGGATGGAGCTGCGCTTGCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156748.2 |
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| CDS-3UTR CCA 90 bp | AGTGCTAAGTCACATGTTTATTGGTCAGTGGGGCCATCCGGGCAGGGGTCTACGACTTTTTGTGACATGTaGGACATTCGACCGGAACGG | + |
|
Preference number: 4 (lower is better) Translates to: SAKSHVYWSVGPSGQGSTTFCDM*DIRPER Trigger: CCGTTCCGGTCGAATGTCCCACATGTCACAAAAAGT...CGTAGACCCCTGCCCGGATGGCCCCACTGACCAATAAACATGTGACTTAGCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR GCA 90 bp | CGCCTGACGTGCACTCGTAACTGTTCCACAGCTTTGAAGGTCTTGCCACAGATCTGCAAGTCTTTCTTCTaGATGAACTGCTGGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLTCTRNCSTALKVLPQICKSFF*MNCWEQ Trigger: CTGCTCCCAGCAGTTCATGCAGAAGAAAGACTTGCA...GATCTGTGGCAAGACCTTCAAAGCTGTGGAACAGTTACGAGTGCACGTCAGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR CCA 90 bp | GGGGATTGTAGTTCTCCACTCTGTCGTGGATCTCCATGTGCCTCCGCAGGTGAGGGTTCATGCAATTCCTaGCTTCATGTTCCAAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GDCSSPLCRGSPCASAGEGSCNS*LHVPRD Trigger: ATCTCTTGGAACATGAAGCCAGGAATTGCATGAACC...CTCACCTGCGGAGGCACATGGAGATCCACGACAGAGTGGAGAACTACAATCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR CCA 90 bp | ATCCTCCGTCGGAAGGTCTCCTGGCATACGGAGCATGTGAAGACCTGGCAGTGTGGTTCATGCAATTCCTaGCTTCATGTTCCAAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ILRRKVSWHTEHVKTWQCGSCNS*LHVPRD Trigger: ATCTCTTGGAACATGAAGCCAGGAATTGCATGAACC...ACACTGCCAGGTCTTCACATGCTCCGTATGCCAGGAGACCTTCCGACGGAGGAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156748.2 |
||
| CDS-3UTR GCA 90 bp | CTAGCAAAGCTCTCCTCTGAACACAGTCTCTGGCTAGGGAGTTGGGAGGCAAGGTTGATCATGTGGCTCTaGAAGTCTTTCTTCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LAKLSSEHSLWLGSWEARLIMWL*KSFFCM Trigger: CATGCAGAAGAAAGACTTGCAGAGCCACATGATCAA...CCTTGCCTCCCAACTCCCTAGCCAGAGACTGTGTTCAGAGGAGAGCTTTGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR CCA 90 bp | TTTCTCACACCTTTGTGTCGCCTGACGTGCACTCGTAACTGTTCCACAGCTTTGCTTTTGACTTCCTTCTaGTTAGCACAGTCTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLTPLCRLTCTRNCSTALLLTSF*LAQSQA Trigger: AGCCTGAGACTGTGCTAACCAGAAGGAAGTCAAAAG...CAAAGCTGTGGAACAGTTACGAGTGCACGTCAGGCGACACAAAGGTGTGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
||
| CDS TCA 90 bp | CGACCGGAACGGCTGCACCTTTTCTGCTGTCAGTGGGCTCGGCTGTaGGAGAACCCGCACCCAGGGCTGGCTCGGCTGCACAGGGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RPERLHLFCCQWARL*ENPHPGLARLHRVF Trigger: GAAAACCCTGTGCAGCCGAGCCAGCCCTGGGTGCGGGTTCTCTCACAGCCGAGCCCACTGACAGCAGAAAAGGTGCAGCCGTTCCGGTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000155389.8 ENSMUST00000156748.2 |
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| CDS-3UTR CAA 90 bp | TTGGGAGGCAAGGCCACCCTGGGTCAGGGACTCCACAATGACCTCAGCAGAGCCGGGGCTCCGTGCAGCTaGATCATGTGGCTCTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LGGKATLGQGLHNDLSRAGAPCS*IMWLCK Trigger: CTTGCAGAGCCACATGATCAAGCTGCACGGAGCCCC...GGCTCTGCTGAGGTCATTGTGGAGTCCCTGACCCAGGGTGGCCTTGCCTCCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
||
| CDS-3UTR CAA 90 bp | CCTCCGCAGGTGAGCCTGCCGCGTGAACTTGTAGCCACACTCGGTGCACTCGAACCCTTCTCGCGCTGCTaGTTGAGTTCCTGCAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: PPQVSLPRELVATLGALEPFSRC*LSSCRT Trigger: GGTTCTGCAGGAACTCAACAAGCAGCGCGAGAAGGG...TTCGAGTGCACCGAGTGTGGCTACAAGTTCACGCGGCAGGCTCACCTGCGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
||
| CDS-3UTR CAA 90 bp | AGTTGGGAGGCAAGGCCACCCTGGGTCAGGGACTCCACAATGACCTCAGCAGAGCCCGTGTGGGTGCGGTaGTGCTTGTCCAAACTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SWEARPPWVRDSTMTSAEPVWVR*CLSKLG Trigger: CCCAAGTTTGGACAAGCACAACCGCACCCACACGGG...CTCTGCTGAGGTCATTGTGGAGTCCCTGACCCAGGGTGGCCTTGCCTCCCAACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
||
| CDS TCA 90 bp | CGTCCAGTGTGGCGTCGCAATACTGGCCCTTCTCGCGCTGCTTGTTaGGTTCCTGCAGAACCCTCACGCTGTGCTGCACGAAGGAACCGT | + |
|
Preference number: 5 (lower is better) Translates to: RPVWRRNTGPSRAAC*VPAEPSRCAARRNR Trigger: ACGGTTCCTTCGTGCAGCACAGCGTGAGGGTTCTGCAGGAACTCAACAAGCAGCGCGAGAAGGGCCAGTATTGCGACGCCACACTGGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000131935.2 ENSMUST00000155389.8 |
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| CDS GCA 90 bp | TGTAGCTCCGTCCTAGACAGGAAGCACTTGGCACAAGTGGGGCACTaGAGGTGGGTGAGACAGGCAGAGGGAGCACATCCAGGTGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: CSSVLDRKHLAQVGH*RWVRQAEGAHPGED Trigger: GTCCTCACCTGGATGTGCTCCCTCTGCCTGTCTCACCCACCTGCAGTGCCCCACTTGTGCCAAGTGCTTCCTGTCTAGGACGGAGCTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGCGGTGATGATGAGAGAGGGCTCCAGGACGCCAGGGCTAGCAAAGCTCTCGGCCTTGGGGGCTCTTaGCAGTCCTCAGACTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSGDDERGLQDARASKALGLGGS*QSSDSL Trigger: CAAAGAGTCTGAGGACTGCAAAGAGCCCCCAAGGCC...GAGAGCTTTGCTAGCCCTGGCGTCCTGGAGCCCTCTCTCATCATCACCGCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
||
| CDS-3UTR CAA 90 bp | CGCCTGACGTGCACTCGTAACTGTTCCACAGCTTTGAAGGTCTTGCCACAGATCTGCATCTGCAGTCCGTaGCGGCTCGAGGCCCGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RLTCTRNCSTALKVLPQICICSP*RLEARC Trigger: GCACCGGGCCTCGAGCCGCAACGGACTGCAGATGCA...GATCTGTGGCAAGACCTTCAAAGCTGTGGAACAGTTACGAGTGCACGTCAGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR CAA 90 bp | CTAGCAAAGCTCTCCTCTGAACACAGTCTCTGGCTAGGGAGTTGGGAGGCAAGGGTCCTGGGAGGCAGGTaGACCCAGTCCACTCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LAKLSSEHSLWLGSWEARVLGGR*TQSTLC Trigger: GCACAGAGTGGACTGGGTCAACCTGCCTCCCAGGAC...CCTTGCCTCCCAACTCCCTAGCCAGAGACTGTGTTCAGAGGAGAGCTTTGCTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR CAA 90 bp | GCAGGGGGCTGGAGAGCCACGACCACCATCTTCTCATCCTCAATGATGAGGTTCCTAGACAGGAAGCACTaGGCACAAGTGGGGCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: AGGWRATTTIFSSSMMRFLDRKH*AQVGHC Trigger: GCAGTGCCCCACTTGTGCCAAGTGCTTCCTGTCTAG...GAACCTCATCATTGAGGATGAGAAGATGGTGGTCGTGGCTCTCCAGCCCCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR CAA 90 bp | GAGCTTGCGCTGCCGGGGATTGTAGTTCTCCACTCTGTCGTGGATCTCCATGTGTGGGTGCGGTTGTGCTaGTCCAAACTTGGGTGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: ELALPGIVVLHSVVDLHVWVRLC*SKLGCG Trigger: TCCGCACCCAAGTTTGGACAAGCACAACCGCACCCA...CACATGGAGATCCACGACAGAGTGGAGAACTACAATCCCCGGCAGCGCAAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS TCA 90 bp | CACCCTCAACTCTTTGGCTGCCAAGAGTACCTGATCCCTGTTCCCTaGGGTGAGGGCGAGGTGGCCAGTGTAGAAAAAGTCCAGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HPQLFGCQEYLIPVP*GEGEVASVEKVQQE Trigger: CTCCTGCTGGACTTTTTCTACACTGGCCACCTCGCCCTCACCTCAGGGAACAGGGATCAGGTACTCTTGGCAGCCAAAGAGTTGAGGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000131935.2 ENSMUST00000155389.8 |
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| CDS GCA 90 bp | GCTGAGGAACTTTTTGTGACATGTGGGACATTCGACCGGAACGGCTaGACCTTTTCTGCTGTCAGTGGGCTCGGCTGTGAGAGAACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: AEELFVTCGTFDRNG*TFSAVSGLGCERTR Trigger: GCGGGTTCTCTCACAGCCGAGCCCACTGACAGCAGAAAAGGTGCAGCCGTTCCGGTCGAATGTCCCACATGTCACAAAAAGTTCCTCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000155389.8 ENSMUST00000156748.2 |
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| CDS GCA 90 bp | TTGGCCTTGATGTGCATCTGCAGTCCGTTGCGGCTCGAGGCCCGGTaGCCGCATTCCTCACACACAAAGAGCTTTTCTCCACGATGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LALMCICSPLRLEAR*PHSSHTKSFSPRCL Trigger: TAAGCATCGTGGAGAAAAGCTCTTTGTGTGTGAGGAATGCGGGCACCGGGCCTCGAGCCGCAACGGACTGCAGATGCACATCAAGGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066715.11 ENSMUST00000155389.8 |
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| CDS CCA 90 bp | GACACCATGTGCAAGCGCAGCTCCATCCTCCGTCGGAAGGTCTCCTaGCATACGGAGCATGTGAAGACCTGTTCTGAGCGGTTCATGCAA | + |
|
Preference number: 5 (lower is better) Translates to: DTMCKRSSILRRKVS*HTEHVKTCSERFMQ Trigger: TTGCATGAACCGCTCAGAACAGGTCTTCACATGCTCCGTATGCCAGGAGACCTTCCGACGGAGGATGGAGCTGCGCTTGCACATGGTGTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066715.11 ENSMUST00000155389.8 |
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| CDS-3UTR CAA 90 bp | ACGCCAGGGCTAGCAAAGCTCTCCTCTGAACACAGTCTCTGGCTAGGGAGTTGGTTCTCGCGCTGCTTGTaGAGTTCCTGCAGAACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TPGLAKLSSEHSLWLGSWFSRCL*SSCRTL Trigger: GAGGGTTCTGCAGGAACTCAACAAGCAGCGCGAGAA...CCAACTCCCTAGCCAGAGACTGTGTTCAGAGGAGAGCTTTGCTAGCCCTGGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS TCA 90 bp | TCAACTCTTTGGCTGCCAAGAGTACCTGATCCCTGTTCCCTGAGGTaGGGGCGAGGTGGCCAGTGTAGAAAAAGTCCAGCAGGAGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: STLWLPRVPDPCSLR*GRGGQCRKSPAGGQ Trigger: TTGGCCTCCTGCTGGACTTTTTCTACACTGGCCACCTCGCCCTCACCTCAGGGAACAGGGATCAGGTACTCTTGGCAGCCAAAGAGTTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000131935.2 ENSMUST00000155389.8 |
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| CDS GCA 90 bp | CATGCGTGGGGTTTAGGGGCTCCGTGCAGCTTGATCATGTGGCTCTaGAAGTCTTTCTTCTGCATGAACTGCTGGGAGCAGGAGGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: HAWGLGAPCSLIMWL*KSFFCMNCWEQEEH Trigger: GTGTTCCTCCTGCTCCCAGCAGTTCATGCAGAAGAAAGACTTGCAGAGCCACATGATCAAGCTGCACGGAGCCCCTAAACCCCACGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066715.11 |
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| CDS GCA 90 bp | ACTGCGTGGGGTTTAGGGGCTCCGTGCAGCTTGATCATGTGGCTCTaGAAGTCTTTCTTCTGCATGAACTGCTGGGAGCAGGAGGAACAC | + |
|
Preference number: 5 (lower is better) Translates to: TAWGLGAPCSLIMWL*KSFFCMNCWEQEEH Trigger: GTGTTCCTCCTGCTCCCAGCAGTTCATGCAGAAGAAAGACTTGCAGAGCCACATGATCAAGCTGCACGGAGCCCCTAAACCCCACGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS CCA 90 bp | GCACTTACTGCGTGGGGTTTAGGGGCTCCGTGCAGCTTGATCATGTaGCTCTGCAAGTCTTTCTTCTGCATGAACTGCTGGGAGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ALTAWGLGAPCSLIM*LCKSFFCMNCWEQE Trigger: CTCCTGCTCCCAGCAGTTCATGCAGAAGAAAGACTTGCAGAGCCACATGATCAAGCTGCACGGAGCCCCTAAACCCCACGCAGTAAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS-3UTR CAA 90 bp | CGCCTGACGTGCACTCGTAACTGTTCCACAGCTTTGAAGGTCTTGCCACAGATCCAGTCCTCAGACTCTTaGTCCTCTGAGGGAGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLTCTRNCSTALKVLPQIQSSDS*SSEGEG Trigger: GCCTTCTCCCTCAGAGGACAAAGAGTCTGAGGACTG...GATCTGTGGCAAGACCTTCAAAGCTGTGGAACAGTTACGAGTGCACGTCAGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
||
| CDS-3UTR CAA 90 bp | AGTGCTAAGTCACATGTTTATTGGTCAGTGGGGCCATCCGGGCAGGGGTCTACGCTTTCATTCCTGTGCTaGGCCTTGATGTGCATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SAKSHVYWSVGPSGQGSTLSFLC*ALMCIC Trigger: GCAGATGCACATCAAGGCCAAGCACAGGAATGAAAG...CGTAGACCCCTGCCCGGATGGCCCCACTGACCAATAAACATGTGACTTAGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS CCA 90 bp | CTGCCTGGGGTAGGGGATGCTGTTCTGAGCGGTTCATGCAATTCCTaGCTTCATGTTCCAAGAGATTCTCCTTGCGGAAGTAACACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPGVGDAVLSGSCNS*LHVPRDSPCGSNTS Trigger: GGAAGTGTTACTTCCGCAAGGAGAATCTCTTGGAACATGAAGCCAGGAATTGCATGAACCGCTCAGAACAGCATCCCCTACCCCAGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156748.2 |
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| CDS GCA 90 bp | TCCTCACACACAAAGAGCTTTTCTCCACGATGCTTAAAAGCCTCGTaGAGCTGTAGCTCCGTCCTAGACAGGAAGCACTTGGCACAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSHTKSFSPRCLKAS*SCSSVLDRKHLAQV Trigger: CACTTGTGCCAAGTGCTTCCTGTCTAGGACGGAGCTACAGCTGCACGAGGCTTTTAAGCATCGTGGAGAAAAGCTCTTTGTGTGTGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066715.11 ENSMUST00000155389.8 |
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| CDS TCA 72 bp | CGGCTGCACCTTTTCTGCTGTCAGTGGGCTCGGCTGTaGGAGAACCCGCACCCAGGGCTGGCTCGGCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RLHLFCCQWARL*ENPHPGLARLH Trigger: GTGCAGCCGAGCCAGCCCTGGGTGCGGGTTCTCTCACAGCCGAGCCCACTGACAGCAGAAAAGGTGCAGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000155389.8 ENSMUST00000156748.2 |
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| CDS GCA 72 bp | ACTTGGACCACCACTTCCCACTCATTGCTCTCGCCCTaGAGCGGGGCACCTCCAGCCTCGAAGGGCCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TWTTTSHSLLSP*SGAPPASKGLG Trigger: CCCAAGGCCCTTCGAGGCTGGAGGTGCCCCGCTGCAGGGCGAGAGCAATGAGTGGGAAGTGGTGGTCCAAGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000155389.8 ENSMUST00000156748.2 |
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| CDS CCA 72 bp | GAGCAGGTGTACCCAGCTGGGGCTGCTCAGTGTCTCTaGGCTCCTGATCCACGGAGGCCAGGCTCAGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: EQVYPAGAAQCL*APDPRRPGSES Trigger: GGACTCTGAGCCTGGCCTCCGTGGATCAGGAGCCCAGAGACACTGAGCAGCCCCAGCTGGGTACACCTGCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000131935.2 ENSMUST00000155389.8 |
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| CDS CCA 72 bp | GCCCTGCAGCGGGGCACCTCCAGCCTCGAAGGGCCTTaGGGGCTCTTTGCAGTCCTCAGACTCTTTGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALQRGTSSLEGP*GLFAVLRLFVL Trigger: GAGGACAAAGAGTCTGAGGACTGCAAAGAGCCCCCAAGGCCCTTCGAGGCTGGAGGTGCCCCGCTGCAGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066715.11 ENSMUST00000155389.8 |
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| CDS CAA 72 bp | CGCCCTGCAGCGGGGCACCTCCAGCCTCGAAGGGCCTaGGGGGCTCTTTGCAGTCCTCAGACTCTTTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RPAAGHLQPRRA*GALCSPQTLCP Trigger: AGGACAAAGAGTCTGAGGACTGCAAAGAGCCCCCAAGGCCCTTCGAGGCTGGAGGTGCCCCGCTGCAGGGCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066715.11 ENSMUST00000155389.8 |
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| CDS CAA 72 bp | GACAGGCAGAGGGAGCACATCCAGGTGAGGACAGGATaGAGCTGTCCCAGAGCCACCGGAACCCCAGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: DRQREHIQVRTG*SCPRATGTPAL Trigger: CAGGGCTGGGGTTCCGGTGGCTCTGGGACAGCTCAATCCTGTCCTCACCTGGATGTGCTCCCTCTGCCTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS CAA 90 bp | CATTGCTCTCGCCCTGCAGCGGGGCACCTCCAGCCTCGAAGGGCCTaGGGGGCTCTTTGCAGTCCTCAGACTCTTTGTCCTCTGAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: HCSRPAAGHLQPRRA*GALCSPQTLCPLRE Trigger: CTCCCTCAGAGGACAAAGAGTCTGAGGACTGCAAAGAGCCCCCAAGGCCCTTCGAGGCTGGAGGTGCCCCGCTGCAGGGCGAGAGCAATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066715.11 ENSMUST00000155389.8 |
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| CDS GCA 72 bp | GGCCTTTCATTCCTGTGCTTGGCCTTGATGTGCATCTaGAGTCCGTTGCGGCTCGAGGCCCGGTGCCCGCAT | + |
|
Preference number: 6 (lower is better) Translates to: GLSFLCLALMCI*SPLRLEARCPH Trigger: ATGCGGGCACCGGGCCTCGAGCCGCAACGGACTGCAGATGCACATCAAGGCCAAGCACAGGAATGAAAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066715.11 ENSMUST00000155389.8 |
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| CDS CAA 72 bp | TTCCTGTGCTTGGCCTTGATGTGCATCTGCAGTCCGTaGCGGCTCGAGGCCCGGTGCCCGCATTCCTCACAC | + |
|
Preference number: 6 (lower is better) Translates to: FLCLALMCICSP*RLEARCPHSSH Trigger: GTGTGAGGAATGCGGGCACCGGGCCTCGAGCCGCAACGGACTGCAGATGCACATCAAGGCCAAGCACAGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066715.11 ENSMUST00000155389.8 |
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| CDS CAA 90 bp | CCCTGCAGCGGGGCACCTCCAGCCTCGAAGGGCCTTGGGGGCTCTTaGCAGTCCTCAGACTCTTTGTCCTCTGAGGGAGAAGGCTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: PCSGAPPASKGLGGS*QSSDSLSSEGEGFK Trigger: TTTGAAGCCTTCTCCCTCAGAGGACAAAGAGTCTGAGGACTGCAAAGAGCCCCCAAGGCCCTTCGAGGCTGGAGGTGCCCCGCTGCAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066715.11 ENSMUST00000155389.8 |
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| CDS TCA 72 bp | GTACCCAGCTGGGGCTGCTCAGTGTCTCTGGGCTCCTaGTCCACGGAGGCCAGGCTCAGAGTCCTGAAAACT | + |
|
Preference number: 6 (lower is better) Translates to: VPSWGCSVSLGS*STEARLRVLKT Trigger: AGTTTTCAGGACTCTGAGCCTGGCCTCCGTGGATCAGGAGCCCAGAGACACTGAGCAGCCCCAGCTGGGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000131935.2 ENSMUST00000155389.8 |
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| CDS TCA 72 bp | TGCGTGAGTTTCCCACAGAGGAAGGCCGTGGTGCTCTaGGCAGGTGTACCCAGCTGGGGCTGCTCAGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: CVSFPQRKAVVL*AGVPSWGCSVS Trigger: AGACACTGAGCAGCCCCAGCTGGGTACACCTGCTCAGAGCACCACGGCCTTCCTCTGTGGGAAACTCACGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000131935.2 ENSMUST00000155389.8 |
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| CDS GCA 72 bp | CAGCAAAGCCCGCTGGGAGGACAACGCTGCCCCCTGTaGCATCCCCGTAGATTCTCTGGAAGAAATGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QQSPLGGQRCPL*HPRRFSGRNGC Trigger: GCAGCCATTTCTTCCAGAGAATCTACGGGGATGGCACAGGGGGCAGCGTTGTCCTCCCAGCGGGCTTTGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000131935.2 ENSMUST00000155389.8 |
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| CDS CAA 72 bp | GTGGCGTCGCAATACTGGCCCTTCTCGCGCTGCTTGTaGAGTTCCTGCAGAACCCTCACGCTGTGCTGCACG | + |
|
Preference number: 6 (lower is better) Translates to: VASQYWPFSRCL*SSCRTLTLCCT Trigger: CGTGCAGCACAGCGTGAGGGTTCTGCAGGAACTCAACAAGCAGCGCGAGAAGGGCCAGTATTGCGACGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000131935.2 ENSMUST00000155389.8 |
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| CDS CAA 90 bp | ACGTCCAGTGTGGCGTCGCAATACTGGCCCTTCTCGCGCTGCTTGTaGAGTTCCTGCAGAACCCTCACGCTGTGCTGCACGAAGGAACCG | + |
|
Preference number: 6 (lower is better) Translates to: TSSVASQYWPFSRCL*SSCRTLTLCCTKEP Trigger: CGGTTCCTTCGTGCAGCACAGCGTGAGGGTTCTGCAGGAACTCAACAAGCAGCGCGAGAAGGGCCAGTATTGCGACGCCACACTGGACGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000131935.2 ENSMUST00000155389.8 |
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| CDS CAA 90 bp | CCCACGTCCAGTGTGGCGTCGCAATACTGGCCCTTCTCGCGCTGCTaGTTGAGTTCCTGCAGAACCCTCACGCTGTGCTGCACGAAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PTSSVASQYWPFSRC*LSSCRTLTLCCTKE Trigger: TTCCTTCGTGCAGCACAGCGTGAGGGTTCTGCAGGAACTCAACAAGCAGCGCGAGAAGGGCCAGTATTGCGACGCCACACTGGACGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000131935.2 ENSMUST00000155389.8 |
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| CDS CAA 90 bp | AGTCTCAGGCTCAGATACGTAATCACCGTCCCTGTCGTCCTCCACTaGGACCACCACTTCCCACTCATTGCTCTCGCCCTGCAGCGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SLRLRYVITVPVVLH*DHHFPLIALALQRG Trigger: GCCCCGCTGCAGGGCGAGAGCAATGAGTGGGAAGTGGTGGTCCAAGTGGAGGACGACAGGGACGGTGATTACGTATCTGAGCCTGAGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000155389.8 ENSMUST00000156748.2 |
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| CDS CAA 90 bp | GGCCTTTCATTCCTGTGCTTGGCCTTGATGTGCATCTGCAGTCCGTaGCGGCTCGAGGCCCGGTGCCCGCATTCCTCACACACAAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GLSFLCLALMCICSP*RLEARCPHSSHTKS Trigger: GCTCTTTGTGTGTGAGGAATGCGGGCACCGGGCCTCGAGCCGCAACGGACTGCAGATGCACATCAAGGCCAAGCACAGGAATGAAAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066715.11 ENSMUST00000155389.8 |
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| CDS TCA 72 bp | TGGCGTCGCAATACTGGCCCTTCTCGCGCTGCTTGTTaGGTTCCTGCAGAACCCTCACGCTGTGCTGCACGA | + |
|
Preference number: 6 (lower is better) Translates to: WRRNTGPSRAAC*VPAEPSRCAAR Trigger: TCGTGCAGCACAGCGTGAGGGTTCTGCAGGAACTCAACAAGCAGCGCGAGAAGGGCCAGTATTGCGACGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000131935.2 ENSMUST00000155389.8 |
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| CDS GCA 72 bp | TCCAGTGTGGCGTCGCAATACTGGCCCTTCTCGCGCTaGTTGTTGAGTTCCTGCAGAACCCTCACGCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSVASQYWPFSR*LLSSCRTLTLC Trigger: GCACAGCGTGAGGGTTCTGCAGGAACTCAACAAGCAGCGCGAGAAGGGCCAGTATTGCGACGCCACACTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000131935.2 ENSMUST00000155389.8 |
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| CDS CCA 72 bp | TGCAAGCGCAGCTCCATCCTCCGTCGGAAGGTCTCCTaGCATACGGAGCATGTGAAGACCTGTTCTGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: CKRSSILRRKVS*HTEHVKTCSER Trigger: CCGCTCAGAACAGGTCTTCACATGCTCCGTATGCCAGGAGACCTTCCGACGGAGGATGGAGCTGCGCTTGCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066715.11 ENSMUST00000155389.8 |
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| CDS CAA 72 bp | AGTGTGGCGTCGCAATACTGGCCCTTCTCGCGCTGCTaGTTGAGTTCCTGCAGAACCCTCACGCTGTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SVASQYWPFSRC*LSSCRTLTLCC Trigger: GCAGCACAGCGTGAGGGTTCTGCAGGAACTCAACAAGCAGCGCGAGAAGGGCCAGTATTGCGACGCCACACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000131935.2 ENSMUST00000155389.8 |
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| CDS TCA 72 bp | TGTGCCTGTCCCACTGAGGTTTGGGGCTGGAAGCTCTaGCATAGCTCCACAGCCTCAGGCACCCTCAACTCT | + |
|
Preference number: 6 (lower is better) Translates to: CACPTEVWGWKL*HSSTASGTLNS Trigger: AGAGTTGAGGGTGCCTGAGGCTGTGGAGCTATGTCAGAGCTTCCAGCCCCAAACCTCAGTGGGACAGGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000131935.2 ENSMUST00000155389.8 |
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| CDS TCA 72 bp | TGGGCTCCTGATCCACGGAGGCCAGGCTCAGAGTCCTaGAAACTTCCTCCTCATCCAAGTCTGTCGGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: WAPDPRRPGSES*KLPPHPSLSAP Trigger: AGGAGCCGACAGACTTGGATGAGGAGGAAGTTTTCAGGACTCTGAGCCTGGCCTCCGTGGATCAGGAGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000131935.2 ENSMUST00000155389.8 |
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| CDS GCA 72 bp | CAATACTGGCCCTTCTCGCGCTGCTTGTTGAGTTCCTaGAGAACCCTCACGCTGTGCTGCACGAAGGAACCG | + |
|
Preference number: 6 (lower is better) Translates to: QYWPFSRCLLSS*RTLTLCCTKEP Trigger: CGGTTCCTTCGTGCAGCACAGCGTGAGGGTTCTGCAGGAACTCAACAAGCAGCGCGAGAAGGGCCAGTATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000131935.2 ENSMUST00000155389.8 |
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| CDS GCA 72 bp | ACATGCCTCAGAAGGGGGCCCTTCTCAGTGAAGCGCTaGTCACAGAATTCACAGCTGAAAGGCCTCTCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: TCLRRGPFSVKR*SQNSQLKGLSP Trigger: GGGCGAGAGGCCTTTCAGCTGTGAATTCTGTGAGCAGCGCTTCACTGAGAAGGGCCCCCTTCTGAGGCATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066715.11 |
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| CDS TCA 72 bp | TGGCTGCCAAGAGTACCTGATCCCTGTTCCCTGAGGTaGGGGCGAGGTGGCCAGTGTAGAAAAAGTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: WLPRVPDPCSLR*GRGGQCRKSPA Trigger: TGCTGGACTTTTTCTACACTGGCCACCTCGCCCTCACCTCAGGGAACAGGGATCAGGTACTCTTGGCAGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000131935.2 ENSMUST00000155389.8 |
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| CDS TCA 72 bp | CACAGACATAAGGCCTTTCATTCCTGTGCTTGGCCTTaGTGTGCATCTGCAGTCCGTTGCGGCTCGAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: HRHKAFHSCAWP*CASAVRCGSRP Trigger: GGGCCTCGAGCCGCAACGGACTGCAGATGCACATCAAGGCCAAGCACAGGAATGAAAGGCCTTATGTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066715.11 ENSMUST00000155389.8 |
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| CDS CCA 72 bp | GACATAGCTCCACAGCCTCAGGCACCCTCAACTCTTTaGCTGCCAAGAGTACCTGATCCCTGTTCCCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: DIAPQPQAPSTL*LPRVPDPCSLR Trigger: CCTCAGGGAACAGGGATCAGGTACTCTTGGCAGCCAAAGAGTTGAGGGTGCCTGAGGCTGTGGAGCTATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000131935.2 ENSMUST00000155389.8 |
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| CDS GCA 72 bp | CTTTTTGTGACATGTGGGACATTCGACCGGAACGGCTaGACCTTTTCTGCTGTCAGTGGGCTCGGCTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: LFVTCGTFDRNG*TFSAVSGLGCE Trigger: CTCACAGCCGAGCCCACTGACAGCAGAAAAGGTGCAGCCGTTCCGGTCGAATGTCCCACATGTCACAAAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000066715.11 ENSMUST00000155389.8 ENSMUST00000156748.2 |
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| CDS CCA 72 bp | GCGTGGGGTTTAGGGGCTCCGTGCAGCTTGATCATGTaGCTCTGCAAGTCTTTCTTCTGCATGAACTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: AWGLGAPCSLIM*LCKSFFCMNCW Trigger: CCAGCAGTTCATGCAGAAGAAAGACTTGCAGAGCCACATGATCAAGCTGCACGGAGCCCCTAAACCCCACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066715.11 ENSMUST00000155389.8 |
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| CDS GCA 72 bp | GGTTTAGGGGCTCCGTGCAGCTTGATCATGTGGCTCTaGAAGTCTTTCTTCTGCATGAACTGCTGGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: GLGAPCSLIMWL*KSFFCMNCWEQ Trigger: CTGCTCCCAGCAGTTCATGCAGAAGAAAGACTTGCAGAGCCACATGATCAAGCTGCACGGAGCCCCTAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066715.11 ENSMUST00000155389.8 |
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| CDS CAA 72 bp | GCACTTACTGCGTGGGGTTTAGGGGCTCCGTGCAGCTaGATCATGTGGCTCTGCAAGTCTTTCTTCTGCATG | + |
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Preference number: 6 (lower is better) Translates to: ALTAWGLGAPCS*IMWLCKSFFCM Trigger: CATGCAGAAGAAAGACTTGCAGAGCCACATGATCAAGCTGCACGGAGCCCCTAAACCCCACGCAGTAAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155389.8 |
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| CDS GCA 72 bp | ACAAAGAGCTTTTCTCCACGATGCTTAAAAGCCTCGTaGAGCTGTAGCTCCGTCCTAGACAGGAAGCACTTG | + |
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Preference number: 6 (lower is better) Translates to: TKSFSPRCLKAS*SCSSVLDRKHL Trigger: CAAGTGCTTCCTGTCTAGGACGGAGCTACAGCTGCACGAGGCTTTTAAGCATCGTGGAGAAAAGCTCTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066715.11 ENSMUST00000155389.8 |
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| CDS CCA 72 bp | GTAGGGGATGCTGTTCTGAGCGGTTCATGCAATTCCTaGCTTCATGTTCCAAGAGATTCTCCTTGCGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: VGDAVLSGSCNS*LHVPRDSPCGS Trigger: ACTTCCGCAAGGAGAATCTCTTGGAACATGAAGCCAGGAATTGCATGAACCGCTCAGAACAGCATCCCCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156748.2 |
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