Pregenerated sensors for ZBTB45 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049600Ensembl transcript IDs: ENSMUST00000051390.9, ENSMUST00000172240.2, ENSMUST00000209997.2, ENSMUST00000210282.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AATAGGGTTCTGGGTCCCAAGTCCACAGGGAAAACAGGTTCAGCTTaGGGAAAGGGAAGGGTCCGTACTCCAGAGCAGAAGCCATCTGGT | + |
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Preference number: 1 (lower is better) Translates to: NRVLGPKSTGKTGSA*GKGRVRTPEQKPSG Trigger: ACCAGATGGCTTCTGCTCTGGAGTACGGACCCTTCCCTTTCCCCAAGCTGAACCTGTTTTCCCTGTGGACTTGGGACCCAGAACCCTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| 3UTR CCA 90 bp | TCCCATAGAGAGAAGCTAAGCAAGTGTAGGAGAGAAATAGGGTTCTaGGTCCCAAGTCCACAGGGAAAACAGGTTCAGCTTGGGGAAAGG | + |
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Preference number: 1 (lower is better) Translates to: SHREKLSKCRREIGF*VPSPQGKQVQLGER Trigger: CCTTTCCCCAAGCTGAACCTGTTTTCCCTGTGGACTTGGGACCCAGAACCCTATTTCTCTCCTACACTTGCTTAGCTTCTCTCTATGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| 3UTR CCA 90 bp | AGAAAGCCTACGAGGCATGTACTGGCCCAATGTCCTTTATTAGATTaGAATCCTAAAATCCCTAGGGAGGTCCATCTGGGCCTCCATAGG | + |
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Preference number: 1 (lower is better) Translates to: RKPTRHVLAQCPLLD*NPKIPREVHLGLHR Trigger: CCTATGGAGGCCCAGATGGACCTCCCTAGGGATTTTAGGATTCCAATCTAATAAAGGACATTGGGCCAGTACATGCCTCGTAGGCTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| 3UTR-3UTR GCA 90 bp | AACGTAGGGACCAAGCCCCAAGCCCACAGCCCAGAAAGCCTACGAGGCATGTACCTGGGCCTCCATAGGTaGCCAATGAGGGAAGGGTGG | + |
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Preference number: 2 (lower is better) Translates to: NVGTKPQAHSPESLRGMYLGLHR*PMREGW Trigger: CCACCCTTCCCTCATTGGGCACCTATGGAGGCCCAG...GTACATGCCTCGTAGGCTTTCTGGGCTGTGGGCTTGGGGCTTGGTCCCTACGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAACGTAGGGACCAAGCCCCAAGCCCACAGCCCAGAAAGCCTACGAGGCATGGCAGAAGCCATCTGGTaGAGTGAACCTAGTCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: RNVGTKPQAHSPESLRGMAEAIW*SEPSPS Trigger: ACTTGGACTAGGTTCACTCCACCAGATGGCTTCTGC...CATGCCTCGTAGGCTTTCTGGGCTGTGGGCTTGGGGCTTGGTCCCTACGTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGAACGTAGGGACCAAGCCCCAAGCCCACAGCCCAGAAAGCCTACGAGGCATAGAGAAATAGGGTTCTaGGTCCCAAGTCCACAGGGA | + |
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Preference number: 2 (lower is better) Translates to: QERRDQAPSPQPRKPTRHREIGF*VPSPQG Trigger: TCCCTGTGGACTTGGGACCCAGAACCCTATTTCTCT...ATGCCTCGTAGGCTTTCTGGGCTGTGGGCTTGGGGCTTGGTCCCTACGTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| 3UTR CAA 90 bp | CTACACCAGGATCCCTGGCCCTCCTTTTCCTCCTGCTACTCAGTTTaGCTCATGGTCCTAAGGACCCAAAACAAGCCCTTATGCTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: LHQDPWPSFSSCYSV*LMVLRTQNKPLCCE Trigger: TTCACAGCATAAGGGCTTGTTTTGGGTCCTTAGGACCATGAGCAAAACTGAGTAGCAGGAGGAAAAGGAGGGCCAGGGATCCTGGTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210282.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCAGAAAGCCTACGAGGCATGTACTGGCCCAATGTCCTTTATTAGATTGGAAGGTGGCTCCAGACTTTaGGGGGTGAGGTCAGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: AQKAYEACTGPMSFIRLEGGSRL*GVRSEN Trigger: ATTCTCTGACCTCACCCCCCAAAGTCTGGAGCCACC...TTCCAATCTAATAAAGGACATTGGGCCAGTACATGCCTCGTAGGCTTTCTGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCTACCCATTTTTGCATCCCACTTATCTAACACAGCCATTCAGTTCACTCTGTCCATAGGTGCCCAATaGGGGAAGGGTGGCTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: VLPIFASHLSNTAIQFTLSIGAQ*GKGGSR Trigger: TCTGGAGCCACCCTTCCCTCATTGGGCACCTATGGA...CAGAGTGAACTGAATGGCTGTGTTAGATAAGTGGGATGCAAAAATGGGTAGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| 3UTR-3UTR TCA 90 bp | ACTAGGTTATTCAGTTGGCAAGCTGGGTCCTACCCATTTTTGCATCCCACTTATTCCATAGGTGCCCAATaGGGGAAGGGTGGCTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: TRLFSWQAGSYPFLHPTYSIGAQ*GKGGSR Trigger: TCTGGAGCCACCCTTCCCTCATTGGGCACCTATGGA...ATAAGTGGGATGCAAAAATGGGTAGGACCCAGCTTGCCAACTGAATAACCTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| 3UTR-3UTR CCA 90 bp | GTTCCAAGAATGTGTTTGCCCAGCTCAATCTGGAAATGGTCTCTGAGGTGGCAGGCAGAAGCCATCTGGTaGAGTGAACCTAGTCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: VPRMCLPSSIWKWSLRWQAEAIW*SEPSPS Trigger: ACTTGGACTAGGTTCACTCCACCAGATGGCTTCTGC...CTGCCACCTCAGAGACCATTTCCAGATTGAGCTGGGCAAACACATTCTTGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| 3UTR-3UTR CCA 90 bp | GCATCAGGTTCCAAGAATGTGTTTGCCCAGCTCAATCTGGAAATGGTCTCTGAGAAAACAGGTTCAGCTTaGGGAAAGGGAAGGGTCCGT | + |
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Preference number: 2 (lower is better) Translates to: ASGSKNVFAQLNLEMVSEKTGSA*GKGRVR Trigger: ACGGACCCTTCCCTTTCCCCAAGCTGAACCTGTTTT...CTCAGAGACCATTTCCAGATTGAGCTGGGCAAACACATTCTTGGAACCTGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| 3UTR-3UTR TCA 90 bp | AAATCTAAAAGGCTTCTGGTTGAAAGGGGACTCCATTCCTGCATTGTAGAAATGTCTGGAAATGGTCTCTaGGGTGGCAGGGGCCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: KSKRLLVERGLHSCIVEMSGNGL*GGRGPK Trigger: CTTAGGGCCCCTGCCACCTCAGAGACCATTTCCAGA...CATTTCTACAATGCAGGAATGGAGTCCCCTTTCAACCAGAAGCCTTTTAGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| 3UTR GCA 72 bp | AAAATCCCTAGGGAGGTCCATCTGGGCCTCCATAGGTaGCCAATGAGGGAAGGGTGGCTCCAGACTTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: KIPREVHLGLHR*PMREGWLQTLG Trigger: CCCCAAAGTCTGGAGCCACCCTTCCCTCATTGGGCACCTATGGAGGCCCAGATGGACCTCCCTAGGGATTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| 3UTR CCA 72 bp | GGGAAGGGTCCGTACTCCAGAGCAGAAGCCATCTGGTaGAGTGAACCTAGTCCAAGTCCTAGACTGCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: GKGPYSRAEAIW*SEPSPSPRLQQ Trigger: CTGCTGCAGTCTAGGACTTGGACTAGGTTCACTCCACCAGATGGCTTCTGCTCTGGAGTACGGACCCTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| 3UTR CCA 72 bp | CTGGGTCCCAAGTCCACAGGGAAAACAGGTTCAGCTTaGGGAAAGGGAAGGGTCCGTACTCCAGAGCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LGPKSTGKTGSA*GKGRVRTPEQK Trigger: CTTCTGCTCTGGAGTACGGACCCTTCCCTTTCCCCAAGCTGAACCTGTTTTCCCTGTGGACTTGGGACCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| 3UTR TCA 72 bp | GAATGTGTTTGCCCAGCTCAATCTGGAAATGGTCTCTaGGGTGGCAGGGGCCCTAAGCATCTCGCTGTCCCA | + |
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Preference number: 3 (lower is better) Translates to: ECVCPAQSGNGL*GGRGPKHLAVP Trigger: TGGGACAGCGAGATGCTTAGGGCCCCTGCCACCTCAGAGACCATTTCCAGATTGAGCTGGGCAAACACATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| 3UTR TCA 72 bp | CAAAAATCCAAGTCTGGGGCTGGTGAGATGGCTCAGTaGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCA | + |
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Preference number: 3 (lower is better) Translates to: QKSKSGAGEMAQ*VRAPDCSSEGP Trigger: TGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACTCACTGAGCCATCTCACCAGCCCCAGACTTGGATTTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210282.2 |
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| 3UTR CCA 72 bp | AAAGGGAAGGGTCCGTACTCCAGAGCAGAAGCCATCTaGTGGAGTGAACCTAGTCCAAGTCCTAGACTGCAG | + |
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Preference number: 3 (lower is better) Translates to: KGKGPYSRAEAI*WSEPSPSPRLQ Trigger: CTGCAGTCTAGGACTTGGACTAGGTTCACTCCACCAGATGGCTTCTGCTCTGGAGTACGGACCCTTCCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| 3UTR CCA 72 bp | GAGAAGCTAAGCAAGTGTAGGAGAGAAATAGGGTTCTaGGTCCCAAGTCCACAGGGAAAACAGGTTCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: EKLSKCRREIGF*VPSPQGKQVQL Trigger: AAGCTGAACCTGTTTTCCCTGTGGACTTGGGACCCAGAACCCTATTTCTCTCCTACACTTGCTTAGCTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| 3UTR CCA 72 bp | ACGAGGCATGTACTGGCCCAATGTCCTTTATTAGATTaGAATCCTAAAATCCCTAGGGAGGTCCATCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: TRHVLAQCPLLD*NPKIPREVHLG Trigger: GCCCAGATGGACCTCCCTAGGGATTTTAGGATTCCAATCTAATAAAGGACATTGGGCCAGTACATGCCTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| 3UTR TCA 72 bp | TCACGAGTAGGTGTCCAACATTCATGGACGTCAAGATaGGGGAGGTGGAGTCTTAAATCTAAAAGGCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: SRVGVQHSWTSR*GRWSLKSKRLL Trigger: CAGAAGCCTTTTAGATTTAAGACTCCACCTCCCTCATCTTGACGTCCATGAATGTTGGACACCTACTCGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| 3UTR GCA 72 bp | TCCAAAAATCCAAGTCTAGGATATCAAAGCAAATTGTaGCTACCTACTCAGGAAATCTCAGGTCACCGCAAA | + |
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Preference number: 3 (lower is better) Translates to: SKNPSLGYQSKL*LPTQEISGHRK Trigger: TTTGCGGTGACCTGAGATTTCCTGAGTAGGTAGGCACAATTTGCTTTGATATCCTAGACTTGGATTTTTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172240.2 |
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| 3UTR GCA 72 bp | AAAGAAAATCCAAGTCTAGGATATCAAAGCAAATTGTaGCTACCTACTCAGGAAATCTCAGGTCACCGCAAA | + |
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Preference number: 3 (lower is better) Translates to: KENPSLGYQSKL*LPTQEISGHRK Trigger: TTTGCGGTGACCTGAGATTTCCTGAGTAGGTAGGCACAATTTGCTTTGATATCCTAGACTTGGATTTTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210282.2 |
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| CDS-3UTR TCA 90 bp | GCTTGGGGAAAGGGAAGGGTCCGTACTCCAGAGCAGAAGCCATCTGGTGGAGTGGGGGGTGCAGGTAGCTaGAGACGCGCGGGCTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: AWGKGRVRTPEQKPSGGVGGAGS*RRAGWR Trigger: GCGCCAGCCCGCGCGTCTTCAGCTACCTGCACCCCC...CACTCCACCAGATGGCTTCTGCTCTGGAGTACGGACCCTTCCCTTTCCCCAAGC 66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR TCA 90 bp | CTGGGTCCCAAGTCCACAGGGAAAACAGGTTCAGCTTGGGGAAAGGGAAGGGTCGAGATGGCTGTGGCCTaGGCGGCAGGGGCCGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: LGPKSTGKTGSAWGKGRVEMAVA*AAGAAG Trigger: GCCAGCGGCCCCTGCCGCTCAGGCCACAGCCATCTC...GACCCTTCCCTTTCCCCAAGCTGAACCTGTTTTCCCTGTGGACTTGGGACCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR TCA 90 bp | AACAGGTTCAGCTTGGGGAAAGGGAAGGGTCCGTACTCCAGAGCAGAAGCCATCGAGATGGCTGTGGCCTaGGCGGCAGGGGCCGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: NRFSLGKGKGPYSRAEAIEMAVA*AAGAAG Trigger: GCCAGCGGCCCCTGCCGCTCAGGCCACAGCCATCTC...GATGGCTTCTGCTCTGGAGTACGGACCCTTCCCTTTCCCCAAGCTGAACCTGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CCA 90 bp | GCTTGGGGAAAGGGAAGGGTCCGTACTCCAGAGCAGAAGCCATCTGGTGGAGTGCGGGGGTGCAGGGGCTaGCCCAGATGGAGTAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: AWGKGRVRTPEQKPSGGVRGCRG*PRWSRR Trigger: CCTCCTACTCCATCTGGGCCAGCCCCTGCACCCCCG...CACTCCACCAGATGGCTTCTGCTCTGGAGTACGGACCCTTCCCTTTCCCCAAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR TCA 90 bp | CTGGGTCCCAAGTCCACAGGGAAAACAGGTTCAGCTTGGGGAAAGGGAAGGGTCCAGGCCCCTCAGCCTTaGTGGGTGCTGGGGGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LGPKSTGKTGSAWGKGRVQAPQP*WVLGVQ Trigger: CTGCACCCCCAGCACCCATCAAGGCTGAGGGGCCTG...GACCCTTCCCTTTCCCCAAGCTGAACCTGTTTTCCCTGTGGACTTGGGACCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR TCA 90 bp | AGAAATAGGGTTCTGGGTCCCAAGTCCACAGGGAAAACAGGTTCAGCTTGGGGAGGGGGTGCAGGTAGCTaGAGACGCGCGGGCTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: RNRVLGPKSTGKTGSAWGGGAGS*RRAGWR Trigger: GCGCCAGCCCGCGCGTCTTCAGCTACCTGCACCCCC...TCCCCAAGCTGAACCTGTTTTCCCTGTGGACTTGGGACCCAGAACCCTATTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR TCA 90 bp | CAGGGAAAACAGGTTCAGCTTGGGGAAAGGGAAGGGTCCGTACTCCAGAGCAGACAGGCCCCTCAGCCTTaGTGGGTGCTGGGGGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: QGKQVQLGEREGSVLQSRQAPQP*WVLGVQ Trigger: CTGCACCCCCAGCACCCATCAAGGCTGAGGGGCCTG...TCTGCTCTGGAGTACGGACCCTTCCCTTTCCCCAAGCTGAACCTGTTTTCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR GCA 90 bp | GGGAAGGGTCCGTACTCCAGAGCAGAAGCCATCTGGTGGAGTGAACCTAGTCCAGGGCGCGCACAGGAGTaGCAGAGATGGCTGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GKGPYSRAEAIWWSEPSPGRAQE*QRWLWP Trigger: AGGCCACAGCCATCTCTGGCACTCCTGTGCGCGCCC...TGGACTAGGTTCACTCCACCAGATGGCTTCTGCTCTGGAGTACGGACCCTTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CCA 90 bp | AACAGGTTCAGCTTGGGGAAAGGGAAGGGTCCGTACTCCAGAGCAGAAGCCATCAAGTGGCGCAGACGGTaGCGCAGCTGCGCGGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: NRFSLGKGKGPYSRAEAIKWRRR*RSCAGA Trigger: AGCACCCGCGCAGCTGCGCCACCGTCTGCGCCACTT...GATGGCTTCTGCTCTGGAGTACGGACCCTTCCCTTTCCCCAAGCTGAACCTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CCA 90 bp | TCTGGGTCCCAAGTCCACAGGGAAAACAGGTTCAGCTTGGGGAAAGGGAAGGGTAAGTGGCGCAGACGGTaGCGCAGCTGCGCGGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: SGSQVHRENRFSLGKGKGKWRRR*RSCAGA Trigger: AGCACCCGCGCAGCTGCGCCACCGTCTGCGCCACTT...ACCCTTCCCTTTCCCCAAGCTGAACCTGTTTTCCCTGTGGACTTGGGACCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CCA 90 bp | CCAAGTCCACAGGGAAAACAGGTTCAGCTTGGGGAAAGGGAAGGGTCCGTACTCAGGAGGTGTTGGCGCTaGGGGGCCGGGAGCACCCAA | + |
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Preference number: 4 (lower is better) Translates to: PSPQGKQVQLGEREGSVLRRCWR*GAGSTQ Trigger: TTGGGTGCTCCCGGCCCCCCAGCGCCAACACCTCCT...GAGTACGGACCCTTCCCTTTCCCCAAGCTGAACCTGTTTTCCCTGTGGACTTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CCA 90 bp | TCTGGGTCCCAAGTCCACAGGGAAAACAGGTTCAGCTTGGGGAAAGGGAAGGGTAGGAGGTGTTGGCGCTaGGGGGCCGGGAGCACCCAA | + |
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Preference number: 4 (lower is better) Translates to: SGSQVHRENRFSLGKGKGRRCWR*GAGSTQ Trigger: TTGGGTGCTCCCGGCCCCCCAGCGCCAACACCTCCT...ACCCTTCCCTTTCCCCAAGCTGAACCTGTTTTCCCTGTGGACTTGGGACCCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CCA 90 bp | TTGGGGAAAGGGAAGGGTCCGTACTCCAGAGCAGAAGCCATCTGGTGGAGTGAAAGGAGGTGTTGGCGCTaGGGGGCCGGGAGCACCCAA | + |
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Preference number: 4 (lower is better) Translates to: LGKGKGPYSRAEAIWWSERRCWR*GAGSTQ Trigger: TTGGGTGCTCCCGGCCCCCCAGCGCCAACACCTCCT...TTCACTCCACCAGATGGCTTCTGCTCTGGAGTACGGACCCTTCCCTTTCCCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CCA 90 bp | TTGGGGAAAGGGAAGGGTCCGTACTCCAGAGCAGAAGCCATCTGGTGGAGTGAATGCCAGAGATGGCTGTaGCCTGAGCGGCAGGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: LGKGKGPYSRAEAIWWSECQRWL*PERQGP Trigger: CGGCCCCTGCCGCTCAGGCCACAGCCATCTCTGGCA...TTCACTCCACCAGATGGCTTCTGCTCTGGAGTACGGACCCTTCCCTTTCCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR TCA 90 bp | CCGTACTCCAGAGCAGAAGCCATCTGGTGGAGTGAACCTAGTCCAAGTCCTAGACAGGCCCCTCAGCCTTaGTGGGTGCTGGGGGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: PYSRAEAIWWSEPSPSPRQAPQP*WVLGVQ Trigger: CTGCACCCCCAGCACCCATCAAGGCTGAGGGGCCTG...TCTAGGACTTGGACTAGGTTCACTCCACCAGATGGCTTCTGCTCTGGAGTACGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR GCA 90 bp | GGAAAGGGAAGGGTCCGTACTCCAGAGCAGAAGCCATCTGGTGGAGTGAACCTAGGGCGCGCACAGGAGTaGCAGAGATGGCTGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GKGRVRTPEQKPSGGVNLGRAQE*QRWLWP Trigger: AGGCCACAGCCATCTCTGGCACTCCTGTGCGCGCCC...TAGGTTCACTCCACCAGATGGCTTCTGCTCTGGAGTACGGACCCTTCCCTTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CCA 90 bp | TTCAGCTTGGGGAAAGGGAAGGGTCCGTACTCCAGAGCAGAAGCCATCTGGTGGAGGAACTCGACCAGCTaGCGCACTGTCTGCGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: FSLGKGKGPYSRAEAIWWRNSTS*RTVCAG Trigger: GCCTGCGCAGACAGTGCGCCAGCTGGTCGAGTTCCT...CCACCAGATGGCTTCTGCTCTGGAGTACGGACCCTTCCCTTTCCCCAAGCTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CCA 90 bp | GGGAAAGGGAAGGGTCCGTACTCCAGAGCAGAAGCCATCTGGTGGAGTGAACCTCAGGAGTGCCAGAGATaGCTGTGGCCTGAGCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GKGKGPYSRAEAIWWSEPQECQR*LWPERQ Trigger: CTGCCGCTCAGGCCACAGCCATCTCTGGCACTCCTG...AGGTTCACTCCACCAGATGGCTTCTGCTCTGGAGTACGGACCCTTCCCTTTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR TCA 90 bp | TTGGGGAAAGGGAAGGGTCCGTACTCCAGAGCAGAAGCCATCTGGTGGAGTGAAGCCAGCACACAGCGGTaGGCACGCAGAGAAGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LGKGKGPYSRAEAIWWSEASTQR*ARREAS Trigger: TGAGGCTTCTCTGCGTGCTCACCGCTGTGTGCTGGC...TTCACTCCACCAGATGGCTTCTGCTCTGGAGTACGGACCCTTCCCTTTCCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR TCA 90 bp | GCTTGGGGAAAGGGAAGGGTCCGTACTCCAGAGCAGAAGCCATCTGGTGGAGTGGGAACACATCTTCAGTaGCCCCAGTCCCCCGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AWGKGRVRTPEQKPSGGVGTHLQ*PQSPEG Trigger: TCCTTCGGGGGACTGGGGTCACTGAAGATGTGTTCC...CACTCCACCAGATGGCTTCTGCTCTGGAGTACGGACCCTTCCCTTTCCCCAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR TCA 90 bp | CAGCATCAGGTTCCAAGAATGTGTTTGCCCAGCTCAATCTGGAAATGGTCTCTGGAGATGGCTGTGGCCTaGGCGGCAGGGGCCGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QHQVPRMCLPSSIWKWSLEMAVA*AAGAAG Trigger: GCCAGCGGCCCCTGCCGCTCAGGCCACAGCCATCTC...CAGAGACCATTTCCAGATTGAGCTGGGCAAACACATTCTTGGAACCTGATGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR GCA 90 bp | CCGTACTCCAGAGCAGAAGCCATCTGGTGGAGTGAACCTAGTCCAAGTCCTAGACTGAGCACTGGGGGCTaGATCTGGCTGGAGCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PYSRAEAIWWSEPSPSPRLSTGG*IWLERG Trigger: CCCACGCTCCAGCCAGATGCAGCCCCCAGTGCTCAG...TCTAGGACTTGGACTAGGTTCACTCCACCAGATGGCTTCTGCTCTGGAGTACGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR CCA 90 bp | GGAAAGGGAAGGGTCCGTACTCCAGAGCAGAAGCCATCTGGTGGAGTGAACCTACAGGGCACAGTCGGGTaGAGCAGACGTTTCCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: GKGRVRTPEQKPSGGVNLQGTVG*SRRFHR Trigger: CCGGTGGAAACGTCTGCTCCACCCGACTGTGCCCTG...TAGGTTCACTCCACCAGATGGCTTCTGCTCTGGAGTACGGACCCTTCCCTTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGCTTGGGGAAAGGGAAGGGTCCGTACTCCAGAGCAGAAGCCATCTGGTGGCTAGCCTCTGCCCATTaGGGGTCTCCAGTAGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSLGKGKGPYSRAEAIWWLASAH*GSPVVS Trigger: GCTCACTACTGGAGACCCTCAATGGGCAGAGGCTAG...CCACCAGATGGCTTCTGCTCTGGAGTACGGACCCTTCCCTTTCCCCAAGCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR TCA 90 bp | CAAGCTGGGTCCTACCCATTTTTGCATCCCACTTATCTAACACAGCCATTCAGTGGGGGTGCAGGTAGCTaGAGACGCGCGGGCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QAGSYPFLHPTYLTQPFSGGAGS*RRAGWR Trigger: GCGCCAGCCCGCGCGTCTTCAGCTACCTGCACCCCC...ACTGAATGGCTGTGTTAGATAAGTGGGATGCAAAAATGGGTAGGACCCAGCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR GCA 90 bp | GGGAAAGGGAAGGGTCCGTACTCCAGAGCAGAAGCCATCTGGTGGAGTGAACCTTGTAGGTGGATGTGGTaGACTGCCTCTGTGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GKGKGPYSRAEAIWWSEPCRWMW*TASVAA Trigger: GGCAGCCACAGAGGCAGTGCACCACATCCACCTACA...AGGTTCACTCCACCAGATGGCTTCTGCTCTGGAGTACGGACCCTTCCCTTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR GCA 90 bp | AGAAATAGGGTTCTGGGTCCCAAGTCCACAGGGAAAACAGGTTCAGCTTGGGGAGGGCGCGCACAGGAGTaGCAGAGATGGCTGTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RNRVLGPKSTGKTGSAWGGRAQE*QRWLWP Trigger: AGGCCACAGCCATCTCTGGCACTCCTGTGCGCGCCC...TCCCCAAGCTGAACCTGTTTTCCCTGTGGACTTGGGACCCAGAACCCTATTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR GCA 90 bp | AGGAACGTAGGGACCAAGCCCCAAGCCCACAGCCCAGAAAGCCTACGAGGCATGCTATGTGTGCGCATGTaGACGTTGAGGGAGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RNVGTKPQAHSPESLRGMLCVRM*TLRELF Trigger: GAAGAGCTCCCTCAACGTGCACATGCGCACACATAG...CATGCCTCGTAGGCTTTCTGGGCTGTGGGCTTGGGGCTTGGTCCCTACGTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR CCA 90 bp | AAGAATGTGTTTGCCCAGCTCAATCTGGAAATGGTCTCTGAGGTGGCAGGGGCCAGGAACTCGACCAGCTaGCGCACTGTCTGCGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KNVFAQLNLEMVSEVAGARNSTS*RTVCAG Trigger: GCCTGCGCAGACAGTGCGCCAGCTGGTCGAGTTCCT...GGCCCCTGCCACCTCAGAGACCATTTCCAGATTGAGCTGGGCAAACACATTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR CCA 90 bp | CCGTACTCCAGAGCAGAAGCCATCTGGTGGAGTGAACCTAGTCCAAGTCCTAGACAGGGCACAGTCGGGTaGAGCAGACGTTTCCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: PYSRAEAIWWSEPSPSPRQGTVG*SRRFHR Trigger: CCGGTGGAAACGTCTGCTCCACCCGACTGTGCCCTG...TCTAGGACTTGGACTAGGTTCACTCCACCAGATGGCTTCTGCTCTGGAGTACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR TCA 90 bp | AGAAATAGGGTTCTGGGTCCCAAGTCCACAGGGAAAACAGGTTCAGCTTGGGGAGCCAGCACACAGCGGTaGGCACGCAGAGAAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RNRVLGPKSTGKTGSAWGASTQR*ARREAS Trigger: TGAGGCTTCTCTGCGTGCTCACCGCTGTGTGCTGGC...TCCCCAAGCTGAACCTGTTTTCCCTGTGGACTTGGGACCCAGAACCCTATTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR GCA 90 bp | TTGGGGAAAGGGAAGGGTCCGTACTCCAGAGCAGAAGCCATCTGGTGGAGTGAATGTAGGTGGATGTGGTaGACTGCCTCTGTGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGKGKGPYSRAEAIWWSECRWMW*TASVAA Trigger: GGCAGCCACAGAGGCAGTGCACCACATCCACCTACA...TTCACTCCACCAGATGGCTTCTGCTCTGGAGTACGGACCCTTCCCTTTCCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR GCA 90 bp | TCTGGGTCCCAAGTCCACAGGGAAAACAGGTTCAGCTTGGGGAAAGGGAAGGGTAGTGATGCCAGTGGATaGAGGGGGATCCTCTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGSQVHRENRFSLGKGKGSDASG*RGILSS Trigger: GCTCGAGAGGATCCCCCTGCATCCACTGGCATCACT...ACCCTTCCCTTTCCCCAAGCTGAACCTGTTTTCCCTGTGGACTTGGGACCCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR GCA 90 bp | GGTTCCAAGAATGTGTTTGCCCAGCTCAATCTGGAAATGGTCTCTGAGGTGGCACTGAGCACTGGGGGCTaGATCTGGCTGGAGCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSKNVFAQLNLEMVSEVALSTGG*IWLERG Trigger: CCCACGCTCCAGCCAGATGCAGCCCCCAGTGCTCAG...TGCCACCTCAGAGACCATTTCCAGATTGAGCTGGGCAAACACATTCTTGGAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR CCA 90 bp | TCCAGCATCAGGTTCCAAGAATGTGTTTGCCCAGCTCAATCTGGAAATGGTCTCCGGGGGTGCAGGGGCTaGCCCAGATGGAGTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSIRFQECVCPAQSGNGLRGCRG*PRWSRR Trigger: CCTCCTACTCCATCTGGGCCAGCCCCTGCACCCCCG...GAGACCATTTCCAGATTGAGCTGGGCAAACACATTCTTGGAACCTGATGCTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR CCA 90 bp | CAGCATCAGGTTCCAAGAATGTGTTTGCCCAGCTCAATCTGGAAATGGTCTCTGTGCCAGAGATGGCTGTaGCCTGAGCGGCAGGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QHQVPRMCLPSSIWKWSLCQRWL*PERQGP Trigger: CGGCCCCTGCCGCTCAGGCCACAGCCATCTCTGGCA...CAGAGACCATTTCCAGATTGAGCTGGGCAAACACATTCTTGGAACCTGATGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR TCA 90 bp | AAGAATGTGTTTGCCCAGCTCAATCTGGAAATGGTCTCTGAGGTGGCAGGGGCCGGAACACATCTTCAGTaGCCCCAGTCCCCCGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KNVFAQLNLEMVSEVAGAGTHLQ*PQSPEG Trigger: TCCTTCGGGGGACTGGGGTCACTGAAGATGTGTTCC...GGCCCCTGCCACCTCAGAGACCATTTCCAGATTGAGCTGGGCAAACACATTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR GCA 90 bp | CAGCATCAGGTTCCAAGAATGTGTTTGCCCAGCTCAATCTGGAAATGGTCTCTGCTGAGCACTGGGGGCTaGATCTGGCTGGAGCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QHQVPRMCLPSSIWKWSLLSTGG*IWLERG Trigger: CCCACGCTCCAGCCAGATGCAGCCCCCAGTGCTCAG...CAGAGACCATTTCCAGATTGAGCTGGGCAAACACATTCTTGGAACCTGATGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR GCA 90 bp | GGGAAGGGTCCGTACTCCAGAGCAGAAGCCATCTGGTGGAGTGAACCTAGTCCACTATGTGTGCGCATGTaGACGTTGAGGGAGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKGPYSRAEAIWWSEPSPLCVRM*TLRELF Trigger: GAAGAGCTCCCTCAACGTGCACATGCGCACACATAG...TGGACTAGGTTCACTCCACCAGATGGCTTCTGCTCTGGAGTACGGACCCTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CCA 90 bp | CAGGAACGTAGGGACCAAGCCCCAAGCCCACAGCCCAGAAAGCCTACGAGGCATGAAAAGTTCTGTAGGTaGATGTGGTGCACTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QERRDQAPSPQPRKPTRHEKFCR*MWCTAS Trigger: AGAGGCAGTGCACCACATCCACCTACAGAACTTTTC...ATGCCTCGTAGGCTTTCTGGGCTGTGGGCTTGGGGCTTGGTCCCTACGTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CCA 90 bp | ATCCAGCATCAGGTTCCAAGAATGTGTTTGCCCAGCTCAATCTGGAAATGGTCTTGCCAGAGATGGCTGTaGCCTGAGCGGCAGGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: IQHQVPRMCLPSSIWKWSCQRWL*PERQGP Trigger: CGGCCCCTGCCGCTCAGGCCACAGCCATCTCTGGCA...AGACCATTTCCAGATTGAGCTGGGCAAACACATTCTTGGAACCTGATGCTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR TCA 90 bp | AACAGGTTCAGCTTGGGGAAAGGGAAGGGTCCGTACTCCAGAGCAGAAGCCATCAGCAGCAGTTTATCCTaGAAGAAGGGTGAGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: NRFSLGKGKGPYSRAEAISSSLS*KKGEPA Trigger: CGCTGGCTCACCCTTCTTTCAGGATAAACTGCTGCT...GATGGCTTCTGCTCTGGAGTACGGACCCTTCCCTTTCCCCAAGCTGAACCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CCA 90 bp | TCCAGCATCAGGTTCCAAGAATGTGTTTGCCCAGCTCAATCTGGAAATGGTCTCCAGGGCACAGTCGGGTaGAGCAGACGTTTCCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSIRFQECVCPAQSGNGLQGTVG*SRRFHR Trigger: CCGGTGGAAACGTCTGCTCCACCCGACTGTGCCCTG...GAGACCATTTCCAGATTGAGCTGGGCAAACACATTCTTGGAACCTGATGCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CCA 90 bp | GTCCTACCCATTTTTGCATCCCACTTATCTAACACAGCCATTCAGTTCACTCTGCGGGGGTGCAGGGGCTaGCCCAGATGGAGTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLPIFASHLSNTAIQFTLRGCRG*PRWSRR Trigger: CCTCCTACTCCATCTGGGCCAGCCCCTGCACCCCCG...CAGAGTGAACTGAATGGCTGTGTTAGATAAGTGGGATGCAAAAATGGGTAGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR TCA 90 bp | GGTTCCAAGAATGTGTTTGCCCAGCTCAATCTGGAAATGGTCTCTGAGGTGGCACTAGCCTCTGCCCATTaGGGGTCTCCAGTAGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSKNVFAQLNLEMVSEVALASAH*GSPVVS Trigger: GCTCACTACTGGAGACCCTCAATGGGCAGAGGCTAG...TGCCACCTCAGAGACCATTTCCAGATTGAGCTGGGCAAACACATTCTTGGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR GCA 90 bp | GGTTCCAAGAATGTGTTTGCCCAGCTCAATCTGGAAATGGTCTCTGAGGTGGCAAGTGATGCCAGTGGATaGAGGGGGATCCTCTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSKNVFAQLNLEMVSEVASDASG*RGILSS Trigger: GCTCGAGAGGATCCCCCTGCATCCACTGGCATCACT...TGCCACCTCAGAGACCATTTCCAGATTGAGCTGGGCAAACACATTCTTGGAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGGTCCGTACTCCAGAGCAGAAGCCATCTGGTGGAGTGAACCTAGTCCAGAAAAGTTCTGTAGGTaGATGTGGTGCACTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GKGPYSRAEAIWWSEPSPEKFCR*MWCTAS Trigger: AGAGGCAGTGCACCACATCCACCTACAGAACTTTTC...TGGACTAGGTTCACTCCACCAGATGGCTTCTGCTCTGGAGTACGGACCCTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CCA 90 bp | ATCCAGCATCAGGTTCCAAGAATGTGTTTGCCCAGCTCAATCTGGAAATGGTCTCAGGAGTGCCAGAGATaGCTGTGGCCTGAGCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IQHQVPRMCLPSSIWKWSQECQR*LWPERQ Trigger: CTGCCGCTCAGGCCACAGCCATCTCTGGCACTCCTG...AGACCATTTCCAGATTGAGCTGGGCAAACACATTCTTGGAACCTGATGCTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGCATCAGGTTCCAAGAATGTGTTTGCCCAGCTCAATCTGGAAATGGTCTCCTAGCCTCTGCCCATTaGGGGTCTCCAGTAGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSIRFQECVCPAQSGNGLLASAH*GSPVVS Trigger: GCTCACTACTGGAGACCCTCAATGGGCAGAGGCTAG...GAGACCATTTCCAGATTGAGCTGGGCAAACACATTCTTGGAACCTGATGCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR TCA 90 bp | GCCCAGAAAGCCTACGAGGCATGTACTGGCCCAATGTCCTTTATTAGATTGGAAGGGAGCTCTTCTGAGTaGAGCGCTTGGCACACACTG | + |
|
Preference number: 4 (lower is better) Translates to: AQKAYEACTGPMSFIRLEGSSSE*SAWHTL Trigger: CAGTGTGTGCCAAGCGCTTCACTCAGAAGAGCTCCC...TTCCAATCTAATAAAGGACATTGGGCCAGTACATGCCTCGTAGGCTTTCTGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR TCA 90 bp | CAGCATCAGGTTCCAAGAATGTGTTTGCCCAGCTCAATCTGGAAATGGTCTCTGGGGAGCTCTTCTGAGTaGAGCGCTTGGCACACACTG | + |
|
Preference number: 4 (lower is better) Translates to: QHQVPRMCLPSSIWKWSLGSSSE*SAWHTL Trigger: CAGTGTGTGCCAAGCGCTTCACTCAGAAGAGCTCCC...CAGAGACCATTTCCAGATTGAGCTGGGCAAACACATTCTTGGAACCTGATGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR GCA 90 bp | TCCAGCATCAGGTTCCAAGAATGTGTTTGCCCAGCTCAATCTGGAAATGGTCTCTGTAGGTGGATGTGGTaGACTGCCTCTGTGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSIRFQECVCPAQSGNGLCRWMW*TASVAA Trigger: GGCAGCCACAGAGGCAGTGCACCACATCCACCTACA...GAGACCATTTCCAGATTGAGCTGGGCAAACACATTCTTGGAACCTGATGCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR TCA 90 bp | GTTCCAAGAATGTGTTTGCCCAGCTCAATCTGGAAATGGTCTCTGAGGTGGCAGAGCAGCAGTTTATCCTaGAAGAAGGGTGAGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VPRMCLPSSIWKWSLRWQSSSLS*KKGEPA Trigger: CGCTGGCTCACCCTTCTTTCAGGATAAACTGCTGCT...CTGCCACCTCAGAGACCATTTCCAGATTGAGCTGGGCAAACACATTCTTGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR TCA 90 bp | ATCCAGCATCAGGTTCCAAGAATGTGTTTGCCCAGCTCAATCTGGAAATGGTCTGGGAGCTCTTCTGAGTaGAGCGCTTGGCACACACTG | + |
|
Preference number: 4 (lower is better) Translates to: IQHQVPRMCLPSSIWKWSGSSSE*SAWHTL Trigger: CAGTGTGTGCCAAGCGCTTCACTCAGAAGAGCTCCC...AGACCATTTCCAGATTGAGCTGGGCAAACACATTCTTGGAACCTGATGCTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR TCA 90 bp | ACTAGGTTATTCAGTTGGCAAGCTGGGTCCTACCCATTTTTGCATCCCACTTATGGAACACATCTTCAGTaGCCCCAGTCCCCCGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TRLFSWQAGSYPFLHPTYGTHLQ*PQSPEG Trigger: TCCTTCGGGGGACTGGGGTCACTGAAGATGTGTTCC...ATAAGTGGGATGCAAAAATGGGTAGGACCCAGCTTGCCAACTGAATAACCTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR CCA 90 bp | AAATCTAAAAGGCTTCTGGTTGAAAGGGGACTCCATTCCTGCATTGTAGAAATGCAGGAGTGCCAGAGATaGCTGTGGCCTGAGCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSKRLLVERGLHSCIVEMQECQR*LWPERQ Trigger: CTGCCGCTCAGGCCACAGCCATCTCTGGCACTCCTG...CATTTCTACAATGCAGGAATGGAGTCCCCTTTCAACCAGAAGCCTTTTAGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| 3UTR CAA 72 bp | GAGTCACAAATCCAGCATCAGGTTCCAAGAATGTGTTaGCCCAGCTCAATCTGGAAATGGTCTCTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESQIQHQVPRMC*PSSIWKWSLRW Trigger: CCACCTCAGAGACCATTTCCAGATTGAGCTGGGCAAACACATTCTTGGAACCTGATGCTGGATTTGTGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR TCA 90 bp | GTCCTACCCATTTTTGCATCCCACTTATCTAACACAGCCATTCAGTTCACTCTGAGCAGCAGTTTATCCTaGAAGAAGGGTGAGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VLPIFASHLSNTAIQFTLSSSLS*KKGEPA Trigger: CGCTGGCTCACCCTTCTTTCAGGATAAACTGCTGCT...CAGAGTGAACTGAATGGCTGTGTTAGATAAGTGGGATGCAAAAATGGGTAGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR GCA 90 bp | GTCCTACCCATTTTTGCATCCCACTTATCTAACACAGCCATTCAGTTCACTCTGCTATGTGTGCGCATGTaGACGTTGAGGGAGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLPIFASHLSNTAIQFTLLCVRM*TLRELF Trigger: GAAGAGCTCCCTCAACGTGCACATGCGCACACATAG...CAGAGTGAACTGAATGGCTGTGTTAGATAAGTGGGATGCAAAAATGGGTAGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172240.2 ENSMUST00000210282.2 |
||
| CDS-3UTR CCA 90 bp | ATCCTGGTTGGCAAGTTGAGATGTGAATGCCAAGCAAATTGGCTCACCACAGTTGAAAAGTTCTGTAGGTaGATGTGGTGCACTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILVGKLRCECQANWLTTVEKFCR*MWCTAS Trigger: AGAGGCAGTGCACCACATCCACCTACAGAACTTTTC...AACTGTGGTGAGCCAATTTGCTTGGCATTCACATCTCAACTTGCCAACCAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210282.2 |
||
| 3UTR CAA 72 bp | CAAAACAAGCCCTTATGCTGTGAAATAATCAATAGTTaGAATAATGTGAAAAGCCAAGGGAGGGATGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QNKPLCCEIINS*NNVKSQGRDVR Trigger: TCTTACATCCCTCCCTTGGCTTTTCACATTATTCAAACTATTGATTATTTCACAGCATAAGGGCTTGTTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210282.2 |
||
| CDS CCA 90 bp | CACCTTGGCCACCCGGGGCGCGCACAGGAGTGCCAGAGATGGCTGTaGCCTGAGCGGCAGGGGCCGCTGGCACCGCCTGCGTTTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HLGHPGRAQECQRWL*PERQGPLAPPAFLP Trigger: TGGGAGAAACGCAGGCGGTGCCAGCGGCCCCTGCCGCTCAGGCCACAGCCATCTCTGGCACTCCTGTGCGCGCCCCGGGTGGCCAAGGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS TCA 90 bp | CAGGCGCGGCAGTCAGCGCTGGCTCCGCATCAGGCCCCTCAGCCTTaGTGGGTGCTGGGGGTGCAGGTAGCTGAAGACGCGCGGGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: QARQSALAPHQAPQP*WVLGVQVAEDARAG Trigger: GCCAGCCCGCGCGTCTTCAGCTACCTGCACCCCCAGCACCCATCAAGGCTGAGGGGCCTGATGCGGAGCCAGCGCTGACTGCCGCGCCTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS CCA 90 bp | ATCGTCATCCTCTTCACCTCTGTCTTCAGGCGCGGCAGTCAGCGCTaGCTCCGCATCAGGCCCCTCAGCCTTGATGGGTGCTGGGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: IVILFTSVFRRGSQR*LRIRPLSLDGCWGC Trigger: GCACCCCCAGCACCCATCAAGGCTGAGGGGCCTGATGCGGAGCCAGCGCTGACTGCCGCGCCTGAAGACAGAGGTGAAGAGGATGACGAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS CCA 90 bp | GGTCTTCACACCTGTTGGGCGAGGCCCAGCCAGGGCACAGTCGGGTaGAGCAGACGTTTCCACCGGACAACTTTCTGGCCCTCCGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: GLHTCWARPSQGTVG*SRRFHRTTFWPSAA Trigger: AGCAGCGGAGGGCCAGAAAGTTGTCCGGTGGAAACGTCTGCTCCACCCGACTGTGCCCTGGCTGGGCCTCGCCCAACAGGTGTGAAGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS TCA 90 bp | AGGTGCAGGGTGAGCTGCAAGGTGTCGCTCCAGCAGTGCACGGTGTaGGAAAACTTTCCCACAGGCAGGGCAGGGCGCACGCTCAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: RCRVSCKVSLQQCTV*ENFPTGRAGRTLRP Trigger: AGGCCTGAGCGTGCGCCCTGCCCTGCCTGTGGGAAAGTTTTCTCACACCGTGCACTGCTGGAGCGACACCTTGCAGCTCACCCTGCACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CAA 90 bp | GGAAAGGGAAGGGTCCGTACTCCAGAGCAGAAGCCATCTGGTGGAGTGAACCTATCAGGCCCCTCAGCCTaGATGGGTGCTGGGGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: GKGRVRTPEQKPSGGVNLSGPSA*MGAGGA Trigger: TGCACCCCCAGCACCCATCAAGGCTGAGGGGCCTGA...TAGGTTCACTCCACCAGATGGCTTCTGCTCTGGAGTACGGACCCTTCCCTTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CAA 90 bp | CCAAGTCCACAGGGAAAACAGGTTCAGCTTGGGGAAAGGGAAGGGTCCGTACTCACACTCATAGGCGGGTaGCTCAGCACCTTGGCCACC | + |
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Preference number: 5 (lower is better) Translates to: PSPQGKQVQLGEREGSVLTLIGG*LSTLAT Trigger: GGTGGCCAAGGTGCTGAGCAACCCGCCTATGAGTGT...GAGTACGGACCCTTCCCTTTCCCCAAGCTGAACCTGTTTTCCCTGTGGACTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CAA 90 bp | CAGGGAAAACAGGTTCAGCTTGGGGAAAGGGAAGGGTCCGTACTCCAGAGCAGACGCGAGCTGAACGTCTaGCGGCAGTGGCTACACTCA | + |
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Preference number: 5 (lower is better) Translates to: QGKQVQLGEREGSVLQSRRELNV*RQWLHS Trigger: TGAGTGTAGCCACTGCCGCAAGACGTTCAGCTCGCG...TCTGCTCTGGAGTACGGACCCTTCCCTTTCCCCAAGCTGAACCTGTTTTCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CAA 90 bp | TCTGGGTCCCAAGTCCACAGGGAAAACAGGTTCAGCTTGGGGAAAGGGAAGGGTCCTAGCCTCTGCCCATaGAGGGTCTCCAGTAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: SGSQVHRENRFSLGKGKGPSLCP*RVSSSE Trigger: CTCACTACTGGAGACCCTCAATGGGCAGAGGCTAGG...ACCCTTCCCTTTCCCCAAGCTGAACCTGTTTTCCCTGTGGACTTGGGACCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS TCA 90 bp | TGCGCACGGTCACATCACAGAAGTGACCGCCTAGCCTCTGCCCATTaGGGGTCTCCAGTAGTGAGCGCGAAAAGTTCTGTAGGTGGATGT | + |
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Preference number: 5 (lower is better) Translates to: CARSHHRSDRLASAH*GSPVVSAKSSVGGC Trigger: ACATCCACCTACAGAACTTTTCGCGCTCACTACTGGAGACCCTCAATGGGCAGAGGCTAGGCGGTCACTTCTGTGATGTGACCGTGCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000209997.2 ENSMUST00000210282.2 |
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| CDS GCA 90 bp | CGGGTGGAGCAGACGTTTCCACCGGACAACTTTCTGGCCCTCCGCTaGTTTCCTCATGCCAAGCGGACACATAACTATCTGGGAACACAT | + |
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Preference number: 5 (lower is better) Translates to: RVEQTFPPDNFLALR*FPHAKRTHNYLGTH Trigger: ATGTGTTCCCAGATAGTTATGTGTCCGCTTGGCATGAGGAAAGCAGCGGAGGGCCAGAAAGTTGTCCGGTGGAAACGTCTGCTCCACCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CAA 90 bp | AGAAATAGGGTTCTGGGTCCCAAGTCCACAGGGAAAACAGGTTCAGCTTGGGGAACACTCATAGGCGGGTaGCTCAGCACCTTGGCCACC | + |
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Preference number: 5 (lower is better) Translates to: RNRVLGPKSTGKTGSAWGTLIGG*LSTLAT Trigger: GGTGGCCAAGGTGCTGAGCAACCCGCCTATGAGTGT...TCCCCAAGCTGAACCTGTTTTCCCTGTGGACTTGGGACCCAGAACCCTATTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CAA 90 bp | AGAAATAGGGTTCTGGGTCCCAAGTCCACAGGGAAAACAGGTTCAGCTTGGGGACCTAGCCTCTGCCCATaGAGGGTCTCCAGTAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: RNRVLGPKSTGKTGSAWGPSLCP*RVSSSE Trigger: CTCACTACTGGAGACCCTCAATGGGCAGAGGCTAGG...TCCCCAAGCTGAACCTGTTTTCCCTGTGGACTTGGGACCCAGAACCCTATTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CAA 90 bp | ATCCAGCATCAGGTTCCAAGAATGTGTTTGCCCAGCTCAATCTGGAAATGGTCTTCAGGCCCCTCAGCCTaGATGGGTGCTGGGGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: IQHQVPRMCLPSSIWKWSSGPSA*MGAGGA Trigger: TGCACCCCCAGCACCCATCAAGGCTGAGGGGCCTGA...AGACCATTTCCAGATTGAGCTGGGCAAACACATTCTTGGAACCTGATGCTGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CAA 90 bp | TCCAGCATCAGGTTCCAAGAATGTGTTTGCCCAGCTCAATCTGGAAATGGTCTCCCTAGCCTCTGCCCATaGAGGGTCTCCAGTAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: SSIRFQECVCPAQSGNGLPSLCP*RVSSSE Trigger: CTCACTACTGGAGACCCTCAATGGGCAGAGGCTAGG...GAGACCATTTCCAGATTGAGCTGGGCAAACACATTCTTGGAACCTGATGCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CAA 90 bp | CAAGCTGGGTCCTACCCATTTTTGCATCCCACTTATCTAACACAGCCATTCAGTCGCGAGCTGAACGTCTaGCGGCAGTGGCTACACTCA | + |
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Preference number: 5 (lower is better) Translates to: QAGSYPFLHPTYLTQPFSRELNV*RQWLHS Trigger: TGAGTGTAGCCACTGCCGCAAGACGTTCAGCTCGCG...ACTGAATGGCTGTGTTAGATAAGTGGGATGCAAAAATGGGTAGGACCCAGCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CAA 90 bp | ACTAGGTTATTCAGTTGGCAAGCTGGGTCCTACCCATTTTTGCATCCCACTTATACACTCATAGGCGGGTaGCTCAGCACCTTGGCCACC | + |
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Preference number: 5 (lower is better) Translates to: TRLFSWQAGSYPFLHPTYTLIGG*LSTLAT Trigger: GGTGGCCAAGGTGCTGAGCAACCCGCCTATGAGTGT...ATAAGTGGGATGCAAAAATGGGTAGGACCCAGCTTGCCAACTGAATAACCTAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS-3UTR CAA 90 bp | AGGACTGTTATATACACAGCCTACCCACCCAAAAATCCAAAAATCCAAGTCTGGCGCGAGCTGAACGTCTaGCGGCAGTGGCTACACTCA | + |
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Preference number: 5 (lower is better) Translates to: RTVIYTAYPPKNPKIQVWRELNV*RQWLHS Trigger: TGAGTGTAGCCACTGCCGCAAGACGTTCAGCTCGCG...CCAGACTTGGATTTTTGGATTTTTGGGTGGGTAGGCTGTGTATATAACAGTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000210282.2 |
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| CDS CCA 72 bp | CACCCGGGGCGCGCACAGGAGTGCCAGAGATGGCTGTaGCCTGAGCGGCAGGGGCCGCTGGCACCGCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: HPGRAQECQRWL*PERQGPLAPPA Trigger: CGCAGGCGGTGCCAGCGGCCCCTGCCGCTCAGGCCACAGCCATCTCTGGCACTCCTGTGCGCGCCCCGGGTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS GCA 72 bp | GCTCAGCACCTTGGCCACCCGGGGCGCGCACAGGAGTaGCAGAGATGGCTGTGGCCTGAGCGGCAGGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: AQHLGHPGRAQE*QRWLWPERQGP Trigger: CGGCCCCTGCCGCTCAGGCCACAGCCATCTCTGGCACTCCTGTGCGCGCCCCGGGTGGCCAAGGTGCTGAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS CCA 72 bp | GCCAGAGATGGCTGTGGCCTGAGCGGCAGGGGCCGCTaGCACCGCCTGCGTTTCTCCCAGCTGAGCACTGGG | + |
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Preference number: 6 (lower is better) Translates to: ARDGCGLSGRGR*HRLRFSQLSTG Trigger: CCCAGTGCTCAGCTGGGAGAAACGCAGGCGGTGCCAGCGGCCCCTGCCGCTCAGGCCACAGCCATCTCTGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS CAA 72 bp | GGCACGGGTGGTGGCAGAGGCGCAGGCGCCGGGGTGTaGGGGACACGGGCACGAGCGATGATCTGTGTGCAC | + |
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Preference number: 6 (lower is better) Translates to: GTGGGRGAGAGV*GTRARAMICVH Trigger: GTGCACACAGATCATCGCTCGTGCCCGTGTCCCCAACACCCCGGCGCCTGCGCCTCTGCCACCACCCGTGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000209997.2 ENSMUST00000210282.2 |
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| CDS TCA 72 bp | CCCTCAGCCTTGATGGGTGCTGGGGGTGCAGGTAGCTaGAGACGCGCGGGCTGGCGCTGCTTGCGGCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: PSALMGAGGAGS*RRAGWRCLRLC Trigger: GCACAGCCGCAAGCAGCGCCAGCCCGCGCGTCTTCAGCTACCTGCACCCCCAGCACCCATCAAGGCTGAGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS CAA 90 bp | CGTCTTGCGGCAGTGGCTACACTCATAGGCGGGTTGCTCAGCACCTaGGCCACCCGGGGCGCGCACAGGAGTGCCAGAGATGGCTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: RLAAVATLIGGLLST*ATRGAHRSARDGCG Trigger: GCCACAGCCATCTCTGGCACTCCTGTGCGCGCCCCGGGTGGCCAAGGTGCTGAGCAACCCGCCTATGAGTGTAGCCACTGCCGCAAGACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS CCA 72 bp | CTCTTCACCTCTGTCTTCAGGCGCGGCAGTCAGCGCTaGCTCCGCATCAGGCCCCTCAGCCTTGATGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: LFTSVFRRGSQR*LRIRPLSLDGC Trigger: GCACCCATCAAGGCTGAGGGGCCTGATGCGGAGCCAGCGCTGACTGCCGCGCCTGAAGACAGAGGTGAAGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS CCA 72 bp | ACCTGTTGGGCGAGGCCCAGCCAGGGCACAGTCGGGTaGAGCAGACGTTTCCACCGGACAACTTTCTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: TCWARPSQGTVG*SRRFHRTTFWP Trigger: GGGCCAGAAAGTTGTCCGGTGGAAACGTCTGCTCCACCCGACTGTGCCCTGGCTGGGCCTCGCCCAACAGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS CAA 72 bp | GCAGTGGCTACACTCATAGGCGGGTTGCTCAGCACCTaGGCCACCCGGGGCGCGCACAGGAGTGCCAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: AVATLIGGLLST*ATRGAHRSARD Trigger: ATCTCTGGCACTCCTGTGCGCGCCCCGGGTGGCCAAGGTGCTGAGCAACCCGCCTATGAGTGTAGCCACTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS CCA 72 bp | GTCGGGTGGAGCAGACGTTTCCACCGGACAACTTTCTaGCCCTCCGCTGCTTTCCTCATGCCAAGCGGACAC | + |
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Preference number: 6 (lower is better) Translates to: VGWSRRFHRTTF*PSAAFLMPSGH Trigger: GTGTCCGCTTGGCATGAGGAAAGCAGCGGAGGGCCAGAAAGTTGTCCGGTGGAAACGTCTGCTCCACCCGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS GCA 72 bp | CAGACGTTTCCACCGGACAACTTTCTGGCCCTCCGCTaGTTTCCTCATGCCAAGCGGACACATAACTATCTG | + |
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Preference number: 6 (lower is better) Translates to: QTFPPDNFLALR*FPHAKRTHNYL Trigger: CAGATAGTTATGTGTCCGCTTGGCATGAGGAAAGCAGCGGAGGGCCAGAAAGTTGTCCGGTGGAAACGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS CCA 72 bp | GCTGCTTTCCTCATGCCAAGCGGACACATAACTATCTaGGAACACATCTTCAGTGACCCCAGTCCCCCGAAG | + |
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Preference number: 6 (lower is better) Translates to: AAFLMPSGHITI*EHIFSDPSPPK Trigger: CTTCGGGGGACTGGGGTCACTGAAGATGTGTTCCCAGATAGTTATGTGTCCGCTTGGCATGAGGAAAGCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000210282.2 |
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| CDS TCA 72 bp | TCACATCACAGAAGTGACCGCCTAGCCTCTGCCCATTaGGGGTCTCCAGTAGTGAGCGCGAAAAGTTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: SHHRSDRLASAH*GSPVVSAKSSV Trigger: TACAGAACTTTTCGCGCTCACTACTGGAGACCCTCAATGGGCAGAGGCTAGGCGGTCACTTCTGTGATGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000051390.9 ENSMUST00000172240.2 ENSMUST00000209997.2 ENSMUST00000210282.2 |
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