RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZBTB38 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040433

Ensembl transcript IDs: ENSMUST00000093798.9, ENSMUST00000126066.8, ENSMUST00000128269.8, ENSMUST00000140121.8, ENSMUST00000152594.8

Found 293 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTAAACCCATTGAACAGGAATGGCTGCTTGAACTGTTCTGAGTTTTaGCCATCCTGGGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTC +
Preference number: 1 (lower is better)
Translates to: LNPLNRNGCLNCSEF*PSWGWKGRVCSPSL
Trigger: GAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCCCAGGATGGGCAAAACTCAGAACAGTTCAAGCAGCCATTCCTGTTCAATGGGTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR CCA 90 bp TTGAACAGGAATGGCTGCTTGAACTGTTCTGAGTTTTGCCCATCCTaGGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGG +
Preference number: 1 (lower is better)
Translates to: LNRNGCLNCSEFCPS*GWKGRVCSPSLLFW
Trigger: CCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCCCAGGATGGGCAAAACTCAGAACAGTTCAAGCAGCCATTCCTGTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR CCA 90 bp GTGGGGCTAATGTCTGCACACATGAGGACAGAGCATCTGGCTTTGTaGATGCTTCTGAGTCCTGTCTGTAAGGGACAGAGCCCTGTCCTT +
Preference number: 1 (lower is better)
Translates to: VGLMSAHMRTEHLAL*MLLSPVCKGQSPVL
Trigger: AAGGACAGGGCTCTGTCCCTTACAGACAGGACTCAGAAGCATCCACAAAGCCAGATGCTCTGTCCTCATGTGTGCAGACATTAGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR CCA 90 bp ACCCCAAACCACACTAAGCCTTCTTCATGGAGACAACACAACATTTaGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCT +
Preference number: 1 (lower is better)
Translates to: TPNHTKPSSWRQHNI*CEKQESSDNLPALA
Trigger: AGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTTGTGTTGTCTCCATGAAGAAGGCTTAGTGTGGTTTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR TCA 90 bp AATAACAGCTCAGCTGTACTTCAAGGGAACAGCACAGCATTCCATTaGGCAGCATACACATGCTCGCCAGTCAGATTCCAAGTGCTCTAC +
Preference number: 1 (lower is better)
Translates to: NNSSAVLQGNSTAFH*AAYTCSPVRFQVLY
Trigger: GTAGAGCACTTGGAATCTGACTGGCGAGCATGTGTATGCTGCTCAATGGAATGCTGTGCTGTTCCCTTGAAGTACAGCTGAGCTGTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR GCA 90 bp CCAAACCACACTAAGCCTTCTTCATGGAGACAACACAACATTTGGTaGGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTC +
Preference number: 1 (lower is better)
Translates to: PNHTKPSSWRQHNIW*EKQESSDNLPALAF
Trigger: GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTTGTGTTGTCTCCATGAAGAAGGCTTAGTGTGGTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR TCA 90 bp ATGTGTAAGATTGAGGAATTAGGCTTTCTGCCATTTCCAAGTGCCTaGGACTTGATTACCACAGAGGTGTGTCTTGCTCTCAACCTCCTG +
Preference number: 1 (lower is better)
Translates to: MCKIEELGFLPFPSA*DLITTEVCLALNLL
Trigger: CAGGAGGTTGAGAGCAAGACACACCTCTGTGGTAATCAAGTCTCAGGCACTTGGAAATGGCAGAAAGCCTAATTCCTCAATCTTACACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR GCA 90 bp CATTCCATTGAGCAGCATACACATGCTCGCCAGTCAGATTCCAAGTaGTCTACTGATTTCTACAGCAGTCCTCATTCTCTGAGGTCTATT +
Preference number: 1 (lower is better)
Translates to: HSIEQHTHARQSDSK*STDFYSSPHSLRSI
Trigger: AATAGACCTCAGAGAATGAGGACTGCTGTAGAAATCAGTAGAGCACTTGGAATCTGACTGGCGAGCATGTGTATGCTGCTCAATGGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR TCA 90 bp CAGATTCCAAGTGCTCTACTGATTTCTACAGCAGTCCTCATTCTCTaGGGTCTATTGCTCGTTAGGATTCTCTACAAGGGACATATAGAC +
Preference number: 1 (lower is better)
Translates to: QIPSALLISTAVLIL*GLLLVRILYKGHID
Trigger: GTCTATATGTCCCTTGTAGAGAATCCTAACGAGCAATAGACCTCAGAGAATGAGGACTGCTGTAGAAATCAGTAGAGCACTTGGAATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR-3UTR TCA 90 bp ATCCTGGGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTTTCCAAGTGCTCTACTaGTTTCTACAGCAGTCCTCA +
Preference number: 2 (lower is better)
Translates to: ILGLEGQGVLSLPPILEVFQVLY*FLQQSS
Trigger: TGAGGACTGCTGTAGAAATCAGTAGAGCACTTGGAA...AACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCCCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR-3UTR GCA 90 bp ATCCTGGGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTTCTGCCATTTCCAAGTaGCTGAGACTTGATTACCAC +
Preference number: 2 (lower is better)
Translates to: ILGLEGQGVLSLPPILEVSAISK*LRLDYH
Trigger: GTGGTAATCAAGTCTCAGGCACTTGGAAATGGCAGA...AACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCCCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR-3UTR CCA 90 bp GGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTTTAACACAACATCCATGGCCTTaGAAGACTGCAGAGAGTTCT +
Preference number: 2 (lower is better)
Translates to: GLEGQGVLSLPPILEVLTQHPWP*KTAESS
Trigger: AGAACTCTCTGCAGTCTTCCAAGGCCATGGATGTTG...TGTTAAAACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR-3UTR CCA 90 bp ATCCTGGGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTGCTGATTCAGCGGAATaGGAGATATCAGGATTATCT +
Preference number: 2 (lower is better)
Translates to: ILGLEGQGVLSLPPILEVADSAE*EISGLS
Trigger: AGATAATCCTGATATCTCCCATTCCGCTGAATCAGC...AACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCCCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR-3UTR TCA 90 bp TTGTGGATGCTTCTGAGTCCTGTCTGTAAGGGACAGAGCCCTGTCCTTCCATATAGCACAGCATTCCATTaGGCAGCATACACATGCTCG +
Preference number: 2 (lower is better)
Translates to: LWMLLSPVCKGQSPVLPYSTAFH*AAYTCS
Trigger: CGAGCATGTGTATGCTGCTCAATGGAATGCTGTGCT...ATATGGAAGGACAGGGCTCTGTCCCTTACAGACAGGACTCAGAAGCATCCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR-3UTR TCA 90 bp AACATTTGGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTCCTGCTTGAACTGTTCTaGGTTTTGCCCATCCTGGGG +
Preference number: 2 (lower is better)
Translates to: NIWCEKQESSDNLPALAFLLELF*VLPILG
Trigger: CCCCAGGATGGGCAAAACTCAGAACAGTTCAAGCAG...GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR-3UTR CCA 90 bp GGACAGAGCCCTGTCCTTCCATATTCTATCTCCCCAACCCTCAGAAACAGTGCTACCACTATGTACCTGTaGGCTGCATTATCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: GQSPVLPYSISPTLRNSATTMYL*AALSPR
Trigger: CCTTGGAGATAATGCAGCCCACAGGTACATAGTGGT...AGCACTGTTTCTGAGGGTTGGGGAGATAGAATATGGAAGGACAGGGCTCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR-3UTR TCA 90 bp AACATTTGGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTCCCTTGCTCTCTCCAGTaGCTAACAACAGTTCAGCAG +
Preference number: 2 (lower is better)
Translates to: NIWCEKQESSDNLPALAFPCSLQ*LTTVQQ
Trigger: CTGCTGAACTGTTGTTAGTCACTGGAGAGAGCAAGG...GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR-3UTR TCA 90 bp TCTGTAAGGGACAGAGCCCTGTCCTTCCATATTCTATCTCCCCAACCCTCAGAACCATTTCCAAGTGCCTaGGACTTGATTACCACAGAG +
Preference number: 2 (lower is better)
Translates to: SVRDRALSFHILSPQPSEPFPSA*DLITTE
Trigger: CTCTGTGGTAATCAAGTCTCAGGCACTTGGAAATGG...TTCTGAGGGTTGGGGAGATAGAATATGGAAGGACAGGGCTCTGTCCCTTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR-3UTR GCA 90 bp TTGTGGATGCTTCTGAGTCCTGTCTGTAAGGGACAGAGCCCTGTCCTTCCATATTATGTACCTGTGGGCTaGATTATCTCCAAGGATGTG +
Preference number: 2 (lower is better)
Translates to: LWMLLSPVCKGQSPVLPYYVPVG*IISKDV
Trigger: CACATCCTTGGAGATAATGCAGCCCACAGGTACATA...ATATGGAAGGACAGGGCTCTGTCCCTTACAGACAGGACTCAGAAGCATCCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR CAA 90 bp TCCTCTGATAACCTTCCAGCCTTGGCTTTCCATCTACTAAACCCATaGAACAGGAATGGCTGCTTGAACTGTTCTGAGTTTTGCCCATCC +
Preference number: 2 (lower is better)
Translates to: SSDNLPALAFHLLNP*NRNGCLNCSEFCPS
Trigger: GGATGGGCAAAACTCAGAACAGTTCAAGCAGCCATTCCTGTTCAATGGGTTTAGTAGATGGAAAGCCAAGGCTGGAAGGTTATCAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR-3UTR TCA 90 bp TACCTGTGGGCTGCATTATCTCCAAGGATGTGTAAGATTGAGGAATTAGGCTTTCTTCATTCTCTGAGGTaGGGCCACTGCAGAGGATTA +
Preference number: 2 (lower is better)
Translates to: YLWAALSPRMCKIEELGFLHSLR*GHCRGL
Trigger: TAATCCTCTGCAGTGGCCTCACCTCAGAGAATGAAG...AAAGCCTAATTCCTCAATCTTACACATCCTTGGAGATAATGCAGCCCACAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR-3UTR TCA 90 bp TTTTGCCTACCCCAAACCACACTAAGCCTTCTTCATGGAGACAACACAACATTTCTTTGTGGATGCTTCTaGGTCCTGTCTGTAAGGGAC +
Preference number: 2 (lower is better)
Translates to: FCLPQTTLSLLHGDNTTFLCGCF*VLSVRD
Trigger: GTCCCTTACAGACAGGACTCAGAAGCATCCACAAAG...AAATGTTGTGTTGTCTCCATGAAGAAGGCTTAGTGTGGTTTGGGGTAGGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR-3UTR GCA 90 bp AACATTTGGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTCAGGCTAAAATTCCGTTaGTGTTTTCACTGTTCAAAA +
Preference number: 2 (lower is better)
Translates to: NIWCEKQESSDNLPALAFRLKFR*CFHCSK
Trigger: TTTTGAACAGTGAAAACAGCAACGGAATTTTAGCCT...GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR-3UTR CAA 90 bp GGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTTTAACAGGTCACCAGGTCCCCTaGTCCCCATGTTATCAGTGG +
Preference number: 3 (lower is better)
Translates to: GLEGQGVLSLPPILEVLTGHQVP*SPCYQW
Trigger: CCACTGATAACATGGGGACAAGGGGACCTGGTGACC...TGTTAAAACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR CCA 72 bp TGCTTGAACTGTTCTGAGTTTTGCCCATCCTGGGGCTaGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTC +
Preference number: 3 (lower is better)
Translates to: CLNCSEFCPSWG*KGRVCSPSLLF
Trigger: GAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCCCAGGATGGGCAAAACTCAGAACAGTTCAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR GCA 72 bp TTGAACAGGAATGGCTGCTTGAACTGTTCTGAGTTTTaGCCATCCTGGGGCTGGAAGGGCAGGGTGTGCTCT +
Preference number: 3 (lower is better)
Translates to: LNRNGCLNCSEF*PSWGWKGRVCS
Trigger: AGAGCACACCCTGCCCTTCCAGCCCCAGGATGGGCAAAACTCAGAACAGTTCAAGCAGCCATTCCTGTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR TCA 72 bp AAACCCATTGAACAGGAATGGCTGCTTGAACTGTTCTaGGTTTTGCCCATCCTGGGGCTGGAAGGGCAGGGT +
Preference number: 3 (lower is better)
Translates to: KPIEQEWLLELF*VLPILGLEGQG
Trigger: ACCCTGCCCTTCCAGCCCCAGGATGGGCAAAACTCAGAACAGTTCAAGCAGCCATTCCTGTTCAATGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR-3UTR CAA 90 bp TCTGTAAGGGACAGAGCCCTGTCCTTCCATATTCTATCTCCCCAACCCTCAGAACCAACATCCATGGCCTaGGAAGACTGCAGAGAGTTC +
Preference number: 3 (lower is better)
Translates to: SVRDRALSFHILSPQPSEPTSMA*EDCREF
Trigger: GAACTCTCTGCAGTCTTCCAAGGCCATGGATGTTGG...TTCTGAGGGTTGGGGAGATAGAATATGGAAGGACAGGGCTCTGTCCCTTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR CCA 72 bp ATGTCTGCACACATGAGGACAGAGCATCTGGCTTTGTaGATGCTTCTGAGTCCTGTCTGTAAGGGACAGAGC +
Preference number: 3 (lower is better)
Translates to: MSAHMRTEHLAL*MLLSPVCKGQS
Trigger: GCTCTGTCCCTTACAGACAGGACTCAGAAGCATCCACAAAGCCAGATGCTCTGTCCTCATGTGTGCAGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR TCA 72 bp TCAGCTGTACTTCAAGGGAACAGCACAGCATTCCATTaGGCAGCATACACATGCTCGCCAGTCAGATTCCAA +
Preference number: 3 (lower is better)
Translates to: SAVLQGNSTAFH*AAYTCSPVRFQ
Trigger: TTGGAATCTGACTGGCGAGCATGTGTATGCTGCTCAATGGAATGCTGTGCTGTTCCCTTGAAGTACAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR-3UTR CAA 90 bp AACATTTGGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTCCATCTACTAAACCCATaGAACAGGAATGGCTGCTTG +
Preference number: 3 (lower is better)
Translates to: NIWCEKQESSDNLPALAFHLLNP*NRNGCL
Trigger: CAAGCAGCCATTCCTGTTCAATGGGTTTAGTAGATG...GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR CCA 72 bp GGGGACAAGAGCCTGTTGTTAACCACTATGTACCTGTaGGCTGCATTATCTCCAAGGATGTGTAAGATTGAG +
Preference number: 3 (lower is better)
Translates to: GDKSLLLTTMYL*AALSPRMCKIE
Trigger: CTCAATCTTACACATCCTTGGAGATAATGCAGCCCACAGGTACATAGTGGTTAACAACAGGCTCTTGTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR TCA 72 bp TACACATGCTCGCCAGTCAGATTCCAAGTGCTCTACTaGTTTCTACAGCAGTCCTCATTCTCTGAGGTCTAT +
Preference number: 3 (lower is better)
Translates to: YTCSPVRFQVLY*FLQQSSFSEVY
Trigger: ATAGACCTCAGAGAATGAGGACTGCTGTAGAAATCAGTAGAGCACTTGGAATCTGACTGGCGAGCATGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR TCA 72 bp ATTGAGGAATTAGGCTTTCTGCCATTTCCAAGTGCCTaGGACTTGATTACCACAGAGGTGTGTCTTGCTCTC +
Preference number: 3 (lower is better)
Translates to: IEELGFLPFPSA*DLITTEVCLAL
Trigger: GAGAGCAAGACACACCTCTGTGGTAATCAAGTCTCAGGCACTTGGAAATGGCAGAAAGCCTAATTCCTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR CCA 72 bp CACACTAAGCCTTCTTCATGGAGACAACACAACATTTaGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCA +
Preference number: 3 (lower is better)
Translates to: HTKPSSWRQHNI*CEKQESSDNLP
Trigger: TGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTTGTGTTGTCTCCATGAAGAAGGCTTAGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR TCA 72 bp GTTCTGAAGAATTTGACCATTCTTCATTCTCTGAGGTaGGGCCACTGCAGAGGATTATATGGCCTAGGTAAG +
Preference number: 3 (lower is better)
Translates to: VLKNLTILHSLR*GHCRGLYGLGK
Trigger: CTTACCTAGGCCATATAATCCTCTGCAGTGGCCTCACCTCAGAGAATGAAGAATGGTCAAATTCTTCAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR-3UTR CAA 90 bp TTTTGCCTACCCCAAACCACACTAAGCCTTCTTCATGGAGACAACACAACATTTAGAGTTCTGAAGAATTaGACCATTCTTCATTCTCTG +
Preference number: 3 (lower is better)
Translates to: FCLPQTTLSLLHGDNTTFRVLKN*TILHSL
Trigger: CAGAGAATGAAGAATGGTCAAATTCTTCAGAACTCT...AAATGTTGTGTTGTCTCCATGAAGAAGGCTTAGTGTGGTTTGGGGTAGGCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR GCA 72 bp GATAAATGCAGATACATACTGGGGTTAACAGCAAAGTaGTACAGTATACAAGGTCACCTTGAATCATGTCCT +
Preference number: 3 (lower is better)
Translates to: DKCRYILGLTAK*YSIQGHLESCP
Trigger: AGGACATGATTCAAGGTGACCTTGTATACTGTAGCACTTTGCTGTTAACCCCAGTATGTATCTGCATTTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR CCA 72 bp GCCCTTTGTGACTCTCTCAACAAAACTCAAATGATGTaGGTGTACATATATACAACGGACAAAACAAAGCTC +
Preference number: 3 (lower is better)
Translates to: ALCDSLNKTQMM*VYIYTTDKTKL
Trigger: GAGCTTTGTTTTGTCCGTTGTATATATGTACACCCACATCATTTGAGTTTTGTTGAGAGAGTCACAAAGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR TCA 72 bp CCTCCTATTCTGGAAGTTTTAACAGTAAGAATCTTTTaGGTTCCAGCTTTCCAGGATCTTAGTTCACAGGAA +
Preference number: 3 (lower is better)
Translates to: PPILEVLTVRIF*VPAFQDLSSQE
Trigger: TTCCTGTGAACTAAGATCCTGGAAAGCTGGAACTCAAAAGATTCTTACTGTTAAAACTTCCAGAATAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR TCA 72 bp CATAAGCCCTTTGTGACTCTCTCAACAAAACTCAAATaGTGTGGGTGTACATATATACAACGGACAAAACAA +
Preference number: 3 (lower is better)
Translates to: HKPFVTLSTKLK*CGCTYIQRTKQ
Trigger: TTGTTTTGTCCGTTGTATATATGTACACCCACATCATTTGAGTTTTGTTGAGAGAGTCACAAAGGGCTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR TCA 72 bp TCATATTTCCTAACCAAAATACAGATGCGAAGACAGTaGGTTACAGTATATCTCGTATGGCATACAGTATGT +
Preference number: 3 (lower is better)
Translates to: SYFLTKIQMRRQ*VTVYLVWHTVC
Trigger: ACATACTGTATGCCATACGAGATATACTGTAACTCACTGTCTTCGCATCTGTATTTTGGTTAGGAAATATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp ATCCTGGGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTCCTCATGGCAGACGCTaGCTCTCTCCTGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: ILGLEGQGVLSLPPILEVPHGRR*LSPGKG
Trigger: GCCTTTGCCAGGAGAGAGCCAGCGTCTGCCATGAGG...AACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCCCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp TGGGAGATATCAGGATTATCTGACCCCTTAAGTCTGGGTAGGGTAGCCCCCAACGGGCGGGACCTCTGCTaGTCCTGGACCCGGAGCATC +
Preference number: 4 (lower is better)
Translates to: WEISGLSDPLSLGRVAPNGRDLC*SWTRSI
Trigger: GATGCTCCGGGTCCAGGAGCAGCAGAGGTCCCGCCC...GTTGGGGGCTACCCTACCCAGACTTAAGGGGTCAGATAATCCTGATATCTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp ATCCTGGGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTAGTGCTCAGCAAGCGTaGGGACAGGCTCTACCTCAT +
Preference number: 4 (lower is better)
Translates to: ILGLEGQGVLSLPPILEVSAQQA*GQALPH
Trigger: ATGAGGTAGAGCCTGTCCGCACGCTTGCTGAGCACT...AACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCCCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp AACATTTGGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTCTTCGGCTCCCGCCCCTaGTGCCCCATCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: NIWCEKQESSDNLPALAFFGSRP*CPIRAA
Trigger: GGCTGCCCTGATGGGGCAGCAGGGGCGGGAGCCGAA...GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp CTGCTGTTAGAGGCAAAGGAGGTCACCAGGTCCCCTTGTCCCCATGTTATCAGTGACCTCTGCTGCTCCTaGACCCGGAGCATCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LLLEAKEVTRSPCPHVISDLCCS*TRSIRG
Trigger: CCCTCTGATGCTCCGGGTCCAGGAGCAGCAGAGGTC...ACTGATAACATGGGGACAAGGGGACCTGGTGACCTCCTTTGCCTCTAACAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR TCA 90 bp ATCCTGGGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTAGTACTGTGTCACTGTaGAAGTCGTCCTTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: ILGLEGQGVLSLPPILEVSTVSL*KSSLRS
Trigger: GGACCTCAAGGACGACTTTCACAGTGACACAGTACT...AACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCCCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp CTGCTGTTAGAGGCAAAGGAGGTCACCAGGTCCCCTTGTCCCCATGTTATCAGTAAGCCTTTCCCATCATaGTCCCGGATGTGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: LLLEAKEVTRSPCPHVISKPFPS*SRMCLR
Trigger: GCGGAGGCACATCCGGGAGCATGATGGGAAAGGCTT...ACTGATAACATGGGGACAAGGGGACCTGGTGACCTCCTTTGCCTCTAACAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR TCA 90 bp CTGCTGTTAGAGGCAAAGGAGGTCACCAGGTCCCCTTGTCCCCATGTTATCAGTGCCTTTGCCCACAGATaGAACACATGCGGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LLLEAKEVTRSPCPHVISAFAHR*NTCGLC
Trigger: ACAGAGCCCGCATGTGTTTCATCTGTGGGCAAAGGC...ACTGATAACATGGGGACAAGGGGACCTGGTGACCTCCTTTGCCTCTAACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR TCA 90 bp ATCCTGGGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTCCTGAAGACCCTCCGTaGTCAGCAATATATTTTGCC +
Preference number: 4 (lower is better)
Translates to: ILGLEGQGVLSLPPILEVPEDPP*SAIYFA
Trigger: GGCAAAATATATTGCTGATCACGGAGGGTCTTCAGG...AACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCCCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp ATCCTGGGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTGTGTTTCTGCCATCTTaGAAGTCCAGTGTGGGCATT +
Preference number: 4 (lower is better)
Translates to: ILGLEGQGVLSLPPILEVVFLPS*KSSVGI
Trigger: AATGCCCACACTGGACTTCCAAGATGGCAGAAACAC...AACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCCCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp TTGTGGATGCTTCTGAGTCCTGTCTGTAAGGGACAGAGCCCTGTCCTTCCATATGCACGGCAGGGCTGCTaGGCAACGTGTTTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LWMLLSPVCKGQSPVLPYARQGC*ATCFCH
Trigger: ATGGCAGAAACACGTTGCCCAGCAGCCCTGCCGTGC...ATATGGAAGGACAGGGCTCTGTCCCTTACAGACAGGACTCAGAAGCATCCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp TTGTGGATGCTTCTGAGTCCTGTCTGTAAGGGACAGAGCCCTGTCCTTCCATATGAGAACTGGCTGCTGTaGACAATGACGGAGGGCACC +
Preference number: 4 (lower is better)
Translates to: LWMLLSPVCKGQSPVLPYENWLL*TMTEGT
Trigger: GGTGCCCTCCGTCATTGTGCACAGCAGCCAGTTCTC...ATATGGAAGGACAGGGCTCTGTCCCTTACAGACAGGACTCAGAAGCATCCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp AACATTTGGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTCTCCTGGGTCGGCTTGTaGAGCTGCATGTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: NIWCEKQESSDNLPALAFSWVGL*SCMWAL
Trigger: CAGTGCCCACATGCAGCTCCACAAGCCGACCCAGGA...GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp TTGTGGATGCTTCTGAGTCCTGTCTGTAAGGGACAGAGCCCTGTCCTTCCATATCCTGGGATGGGCACGTaGCTAGACCTCATGCAGATC +
Preference number: 4 (lower is better)
Translates to: LWMLLSPVCKGQSPVLPYPGMGT*LDLMQI
Trigger: GATCTGCATGAGGTCTAGCCACGTGCCCATCCCAGG...ATATGGAAGGACAGGGCTCTGTCCCTTACAGACAGGACTCAGAAGCATCCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp GAGCCTGTTGTTAACCACTATGTACCTGTGGGCTGCATTATCTCCAAGGATGTGGTCCCCAGGGGTTTCTaGGTCATTCTCCCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: EPVVNHYVPVGCIISKDVVPRGF*VILPRQ
Trigger: CTGCCTCGGGAGAATGACCCAGAAACCCCTGGGGAC...CACATCCTTGGAGATAATGCAGCCCACAGGTACATAGTGGTTAACAACAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR TCA 90 bp CTGCTGTTAGAGGCAAAGGAGGTCACCAGGTCCCCTTGTCCCCATGTTATCAGTTCCTGTTTTAGCAGATaGGCTGCTGTCCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: LLLEAKEVTRSPCPHVISSCFSR*AAVLFP
Trigger: AGGGAACAGGACAGCAGCTCATCTGCTAAAACAGGA...ACTGATAACATGGGGACAAGGGGACCTGGTGACCTCCTTTGCCTCTAACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp GGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTTTAACACTTTTTCCCTGCAGCTaGAAGATCAGTGACGGTTTC +
Preference number: 4 (lower is better)
Translates to: GLEGQGVLSLPPILEVLTLFPCS*KISDGF
Trigger: GAAACCGTCACTGATCTTGCAGCTGCAGGGAAAAAG...TGTTAAAACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp AACATTTGGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTCGACCTCATGCAGATCTaGTCGTGCCGGTCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: NIWCEKQESSDNLPALAFDLMQI*SCRSSL
Trigger: CAGACTGGACCGGCACGAGCAGATCTGCATGAGGTC...GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp CTGCTGTTAGAGGCAAAGGAGGTCACCAGGTCCCCTTGTCCCCATGTTATCAGTTGGGCAACGTGTTTCTaGCATCTTGGAAGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LLLEAKEVTRSPCPHVISWATCF*HLGSPV
Trigger: CACTGGACTTCCAAGATGGCAGAAACACGTTGCCCA...ACTGATAACATGGGGACAAGGGGACCTGGTGACCTCCTTTGCCTCTAACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp ATCCTGGGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTGAGATTGGTTTTCACTaGCTGCTTCCTCCATTTGAT +
Preference number: 4 (lower is better)
Translates to: ILGLEGQGVLSLPPILEVEIGFH*LLPPFD
Trigger: ATCAAATGGAGGAAGCAGGCAGTGAAAACCAATCTC...AACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCCCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp CTGCTGTTAGAGGCAAAGGAGGTCACCAGGTCCCCTTGTCCCCATGTTATCAGTGCTCTGGAACTGCTTTaGACAGAGCTCGCAGATGTA +
Preference number: 4 (lower is better)
Translates to: LLLEAKEVTRSPCPHVISALELL*TELADV
Trigger: TACATCTGCGAGCTCTGTGCAAAGCAGTTCCAGAGC...ACTGATAACATGGGGACAAGGGGACCTGGTGACCTCCTTTGCCTCTAACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp CTGCTGTTAGAGGCAAAGGAGGTCACCAGGTCCCCTTGTCCCCATGTTATCAGTTATCCCCTTCATTGCTaGGAGGCTCTGAGTGTGACA +
Preference number: 4 (lower is better)
Translates to: LLLEAKEVTRSPCPHVISYPLHC*EALSVT
Trigger: TGTCACACTCAGAGCCTCCCAGCAATGAAGGGGATA...ACTGATAACATGGGGACAAGGGGACCTGGTGACCTCCTTTGCCTCTAACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp AACATTTGGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTCTTGTGGAGCTGCATGTaGGCACTGAGCAGCGTGCTG +
Preference number: 4 (lower is better)
Translates to: NIWCEKQESSDNLPALAFLWSCM*ALSSVL
Trigger: CAGCACGCTGCTCAGTGCCCACATGCAGCTCCACAA...GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp GGACAGAGCCCTGTCCTTCCATATTCTATCTCCCCAACCCTCAGAAACAGTGCTCATGCCGCCGGAGGCTaGACAAAGTCACATAACTAC +
Preference number: 4 (lower is better)
Translates to: GQSPVLPYSISPTLRNSAHAAGG*TKSHNY
Trigger: GTAGTTATGTGACTTTGTCCAGCCTCCGGCGGCATG...AGCACTGTTTCTGAGGGTTGGGGAGATAGAATATGGAAGGACAGGGCTCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp TGGGAGATATCAGGATTATCTGACCCCTTAAGTCTGGGTAGGGTAGCCCCCAACAGACAGAAAATGCACTaGTACCGCCTCTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: WEISGLSDPLSLGRVAPNRQKMH*YRLSPV
Trigger: CACTGGGGAGAGGCGGTACCAGTGCATTTTCTGTCT...GTTGGGGGCTACCCTACCCAGACTTAAGGGGTCAGATAATCCTGATATCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp GGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTTTAACAGGCTTTTCTCCAGTGTaGCATCTCATGTGCATCTTG +
Preference number: 4 (lower is better)
Translates to: GLEGQGVLSLPPILEVLTGFSPV*HLMCIL
Trigger: CAAGATGCACATGAGATGCCACACTGGAGAAAAGCC...TGTTAAAACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR TCA 90 bp TCTGTAAGGGACAGAGCCCTGTCCTTCCATATTCTATCTCCCCAACCCTCAGAAGGAGCATCAGAGGGCTaGTTTTCATCTTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SVRDRALSFHILSPQPSEGASEG*FSSSLG
Trigger: TCCCAGGGAAGATGAAAATCAGCCCTCTGATGCTCC...TTCTGAGGGTTGGGGAGATAGAATATGGAAGGACAGGGCTCTGTCCCTTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR TCA 90 bp GAGCCTGTTGTTAACCACTATGTACCTGTGGGCTGCATTATCTCCAAGGATGTGGTTCTTCTCCACGAGTaGACATTTGCATGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: EPVVNHYVPVGCIISKDVVLLHE*TFACRR
Trigger: CCGGCGGCATGCAAATGTTCACTCGTGGAGAAGAAC...CACATCCTTGGAGATAATGCAGCCCACAGGTACATAGTGGTTAACAACAGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR TCA 90 bp TGGATGCTTCTGAGTCCTGTCTGTAAGGGACAGAGCCCTGTCCTTCCATATTCTGTTTGTGGTTTTGCCTaGAGACCCTCCGTGATCAGC +
Preference number: 4 (lower is better)
Translates to: WMLLSPVCKGQSPVLPYSVCGFA*RPSVIS
Trigger: GCTGATCACGGAGGGTCTTCAGGCAAAACCACAAAC...AGAATATGGAAGGACAGGGCTCTGTCCCTTACAGACAGGACTCAGAAGCATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp GGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTTTAACAATAAGATGCCCCGAATaGGCTGCTCATTTAAGATGG +
Preference number: 4 (lower is better)
Translates to: GLEGQGVLSLPPILEVLTIRCPE*AAHLRW
Trigger: CCATCTTAAATGAGCAGCGCATTCGGGGCATCTTAT...TGTTAAAACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp TCTGTAAGGGACAGAGCCCTGTCCTTCCATATTCTATCTCCCCAACCCTCAGAAAGGCCGAGTGCTCACTaGCTTTGCCCACAGATGAAA +
Preference number: 4 (lower is better)
Translates to: SVRDRALSFHILSPQPSERPSAH*LCPQMK
Trigger: TTTCATCTGTGGGCAAAGGCAGTGAGCACTCGGCCT...TTCTGAGGGTTGGGGAGATAGAATATGGAAGGACAGGGCTCTGTCCCTTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp GGACAGAGCCCTGTCCTTCCATATTCTATCTCCCCAACCCTCAGAAACAGTGCTCAGCGTTTGTGGTTTTaGCTGAAGACCCTCCGTGAT +
Preference number: 4 (lower is better)
Translates to: GQSPVLPYSISPTLRNSAQRLWF*LKTLRD
Trigger: ATCACGGAGGGTCTTCAGGCAAAACCACAAACGCTG...AGCACTGTTTCTGAGGGTTGGGGAGATAGAATATGGAAGGACAGGGCTCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp GGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTTTAACATCTTCCCTGGGAAAATaGATATCCCCTTCATTGCTG +
Preference number: 4 (lower is better)
Translates to: GLEGQGVLSLPPILEVLTSSLGK*ISPSLL
Trigger: CAGCAATGAAGGGGATATCCATTTTCCCAGGGAAGA...TGTTAAAACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp GAGCCTGTTGTTAACCACTATGTACCTGTGGGCTGCATTATCTCCAAGGATGTGTCTACACATTCAGCCTaGCAAAGCCCAAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: EPVVNHYVPVGCIISKDVSTHSA*QSPRGL
Trigger: CAGCCCCCTTGGGCTTTGCCAGGCTGAATGTGTAGA...CACATCCTTGGAGATAATGCAGCCCACAGGTACATAGTGGTTAACAACAGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR TCA 90 bp TTTTGCCTACCCCAAACCACACTAAGCCTTCTTCATGGAGACAACACAACATTTGCTGCATGTGGGCACTaGGCAGCGTGCTGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: FCLPQTTLSLLHGDNTTFAACGH*AACCCQ
Trigger: TTGACAGCAGCACGCTGCTCAGTGCCCACATGCAGC...AAATGTTGTGTTGTCTCCATGAAGAAGGCTTAGTGTGGTTTGGGGTAGGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp TCTGTAAGGGACAGAGCCCTGTCCTTCCATATTCTATCTCCCCAACCCTCAGAATACGTTTGCACACGATaGAGCTGTAGAGCATCTGCC +
Preference number: 4 (lower is better)
Translates to: SVRDRALSFHILSPQPSEYVCTR*SCRASA
Trigger: GGCAGATGCTCTACAGCTGCATCGTGTGCAAACGTA...TTCTGAGGGTTGGGGAGATAGAATATGGAAGGACAGGGCTCTGTCCCTTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp GGACAGAGCCCTGTCCTTCCATATTCTATCTCCCCAACCCTCAGAAACAGTGCTAGTGCTCACTGCCTTTaGCCACAGATGAAACACATG +
Preference number: 4 (lower is better)
Translates to: GQSPVLPYSISPTLRNSASAHCL*PQMKHM
Trigger: CATGTGTTTCATCTGTGGGCAAAGGCAGTGAGCACT...AGCACTGTTTCTGAGGGTTGGGGAGATAGAATATGGAAGGACAGGGCTCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp GAGCCTGTTGTTAACCACTATGTACCTGTGGGCTGCATTATCTCCAAGGATGTGGCCACGGCTTATCAGTaGAGTCCTGGTCACTCACTT +
Preference number: 4 (lower is better)
Translates to: EPVVNHYVPVGCIISKDVATAYQ*SPGHSL
Trigger: AAGTGAGTGACCAGGACTCCACTGATAAGCCGTGGC...CACATCCTTGGAGATAATGCAGCCCACAGGTACATAGTGGTTAACAACAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp GGACAGAGCCCTGTCCTTCCATATTCTATCTCCCCAACCCTCAGAAACAGTGCTCGTGGTTCCGTTTGGTaGAGAGATACAAGAAACCCT +
Preference number: 4 (lower is better)
Translates to: GQSPVLPYSISPTLRNSARGSVW*RDTRNP
Trigger: AGGGTTTCTTGTATCTCTCCACCAAACGGAACCACG...AGCACTGTTTCTGAGGGTTGGGGAGATAGAATATGGAAGGACAGGGCTCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp GGACAGAGCCCTGTCCTTCCATATTCTATCTCCCCAACCCTCAGAAACAGTGCTGCTCGTGGTTCCGTTTaGTGGAGAGATACAAGAAAC +
Preference number: 4 (lower is better)
Translates to: GQSPVLPYSISPTLRNSAARGSV*WRDTRN
Trigger: GTTTCTTGTATCTCTCCACCAAACGGAACCACGAGC...AGCACTGTTTCTGAGGGTTGGGGAGATAGAATATGGAAGGACAGGGCTCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR TCA 90 bp GAGCCTGTTGTTAACCACTATGTACCTGTGGGCTGCATTATCTCCAAGGATGTGATCTCATGTGCATCTTaGGTGTGGAGGAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: EPVVNHYVPVGCIISKDVISCAS*VWRSSG
Trigger: TCCAGAGCTCCTCCACACTCAAGATGCACATGAGAT...CACATCCTTGGAGATAATGCAGCCCACAGGTACATAGTGGTTAACAACAGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR TCA 90 bp TCTGTAAGGGACAGAGCCCTGTCCTTCCATATTCTATCTCCCCAACCCTCAGAATACAATACTGACAGATaGACTCCTTCACGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SVRDRALSFHILSPQPSEYNTDR*TPSRPG
Trigger: ACCTGGGCGTGAAGGAGTTCATCTGTCAGTATTGTA...TTCTGAGGGTTGGGGAGATAGAATATGGAAGGACAGGGCTCTGTCCCTTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp AACATTTGGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTCGCTTGTTGCAGTACTTaGACACAAAAGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: NIWCEKQESSDNLPALAFACCST*TQKAPG
Trigger: CCCAGGAGCCTTTTGTGTGCAAGTACTGCAACAAGC...GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR CAA 72 bp TTCCATCTACTAAACCCATTGAACAGGAATGGCTGCTaGAACTGTTCTGAGTTTTGCCCATCCTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FHLLNPLNRNGC*NCSEFCPSWGW
Trigger: CCAGCCCCAGGATGGGCAAAACTCAGAACAGTTCAAGCAGCCATTCCTGTTCAATGGGTTTAGTAGATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR TCA 90 bp TTTTGCCTACCCCAAACCACACTAAGCCTTCTTCATGGAGACAACACAACATTTTGTGAAAGTCGTCCTTaGGGTCCCTGGAGAGGGACA +
Preference number: 4 (lower is better)
Translates to: FCLPQTTLSLLHGDNTTFCESRP*GPWRGT
Trigger: TGTCCCTCTCCAGGGACCTCAAGGACGACTTTCACA...AAATGTTGTGTTGTCTCCATGAAGAAGGCTTAGTGTGGTTTGGGGTAGGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp TTGTGGATGCTTCTGAGTCCTGTCTGTAAGGGACAGAGCCCTGTCCTTCCATATAGACGTGACTGGAAATaGAGATCGTATGGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: LWMLLSPVCKGQSPVLPYRRDWK*RSYGSK
Trigger: TTTGGAGCCATACGATCTGCATTTCCAGTCACGTCT...ATATGGAAGGACAGGGCTCTGTCCCTTACAGACAGGACTCAGAAGCATCCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp GAGCCTGTTGTTAACCACTATGTACCTGTGGGCTGCATTATCTCCAAGGATGTGCACCTTTTTGAAGCTTaGTCTCAAGTCCAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: EPVVNHYVPVGCIISKDVHLFEA*SQVQGR
Trigger: TCTCCCCTGGACTTGAGAGCAAGCTTCAAAAAGGTG...CACATCCTTGGAGATAATGCAGCCCACAGGTACATAGTGGTTAACAACAGGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp AACATTTGGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTCACTTGGAACAACAGCTaGAGTTATAAACGAGGGGCG +
Preference number: 4 (lower is better)
Translates to: NIWCEKQESSDNLPALAFTWNNS*SYKRGA
Trigger: CGCCCCTCGTTTATAACTGCAGCTGTTGTTCCAAGT...GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp TTGTGGATGCTTCTGAGTCCTGTCTGTAAGGGACAGAGCCCTGTCCTTCCATATGTAGCTCTTATAAGGTaGCCTCTTGCATCTCATAGG +
Preference number: 4 (lower is better)
Translates to: LWMLLSPVCKGQSPVLPYVALIR*PLASHR
Trigger: CCTATGAGATGCAAGAGGGCACCTTATAAGAGCTAC...ATATGGAAGGACAGGGCTCTGTCCCTTACAGACAGGACTCAGAAGCATCCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp TGGGAGATATCAGGATTATCTGACCCCTTAAGTCTGGGTAGGGTAGCCCCCAACTGTCTTCGGAATCAGTaGAAAGCTGACTTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: WEISGLSDPLSLGRVAPNCLRNQ*KADFPR
Trigger: TCTTGGAAAGTCAGCTTTGCACTGATTCCGAAGACA...GTTGGGGGCTACCCTACCCAGACTTAAGGGGTCAGATAATCCTGATATCTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp AACATTTGGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTCGTTGAGTCAGAATCCTaGGTTTGGGGCTTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: NIWCEKQESSDNLPALAFVESES*VWGFGF
Trigger: AAAGCCAAAGCCCCAAACCCAGGATTCTGACTCAAC...GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp TTGTGGATGCTTCTGAGTCCTGTCTGTAAGGGACAGAGCCCTGTCCTTCCATATGTGGCATATTTTCTGTaGTTGAGTCAGAATCCTGGG +
Preference number: 4 (lower is better)
Translates to: LWMLLSPVCKGQSPVLPYVAYFL*LSQNPG
Trigger: CCCAGGATTCTGACTCAACCACAGAAAATATGCCAC...ATATGGAAGGACAGGGCTCTGTCCCTTACAGACAGGACTCAGAAGCATCCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp AACATTTGGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTCATCTGGAGCTGGCTGTaGGCTTCTTTCTTGATTCAC +
Preference number: 4 (lower is better)
Translates to: NIWCEKQESSDNLPALAFIWSWL*ASFLIH
Trigger: GTGAATCAAGAAAGAAGCCCACAGCCAGCTCCAGAT...GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp GGACAGAGCCCTGTCCTTCCATATTCTATCTCCCCAACCCTCAGAAACAGTGCTTGCTGTCAAAGGACTTaGAACAACAGCTGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: GQSPVLPYSISPTLRNSACCQRT*NNSCSY
Trigger: ATAACTGCAGCTGTTGTTCCAAGTCCTTTGACAGCA...AGCACTGTTTCTGAGGGTTGGGGAGATAGAATATGGAAGGACAGGGCTCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp CTGCTGTTAGAGGCAAAGGAGGTCACCAGGTCCCCTTGTCCCCATGTTATCAGTAGAGTCTGTGATCTATaGCATGAAAGGACTTCTGAT +
Preference number: 4 (lower is better)
Translates to: LLLEAKEVTRSPCPHVISRVCDL*HERTSD
Trigger: ATCAGAAGTCCTTTCATGCCATAGATCACAGACTCT...ACTGATAACATGGGGACAAGGGGACCTGGTGACCTCCTTTGCCTCTAACAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp AACATTTGGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTCCTTGGAAGTCCAGTGTaGGCATTTCAGAGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: NIWCEKQESSDNLPALAFLGSPV*AFQSFA
Trigger: TGCAAAGCTCTGAAATGCCCACACTGGACTTCCAAG...GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp GGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTTTAACAAAGTTTCAATCTTACTaGTTTCTTCAGCGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: GLEGQGVLSLPPILEVLTKFQSY*FLQRLW
Trigger: CCACAAACGCTGAAGAAACCAGTAAGATTGAAACTT...TGTTAAAACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp TTGTGGATGCTTCTGAGTCCTGTCTGTAAGGGACAGAGCCCTGTCCTTCCATATTTTGTAGTTGTAGTATaGGCGCCACGGCTTATCAGT +
Preference number: 4 (lower is better)
Translates to: LWMLLSPVCKGQSPVLPYFVVVV*APRLIS
Trigger: ACTGATAAGCCGTGGCGCCCATACTACAACTACAAA...ATATGGAAGGACAGGGCTCTGTCCCTTACAGACAGGACTCAGAAGCATCCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp TTTTGCCTACCCCAAACCACACTAAGCCTTCTTCATGGAGACAACACAACATTTATGTGCCTCCGCTCGTaGTTCCGTTTGGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: FCLPQTTLSLLHGDNTTFMCLRS*FRLVER
Trigger: TCTCTCCACCAAACGGAACCACGAGCGGAGGCACAT...AAATGTTGTGTTGTCTCCATGAAGAAGGCTTAGTGTGGTTTGGGGTAGGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp GGACAGAGCCCTGTCCTTCCATATTCTATCTCCCCAACCCTCAGAAACAGTGCTCTGTTTTGCATATTTTaGGGCACTGGAAGCAAGCAA +
Preference number: 4 (lower is better)
Translates to: GQSPVLPYSISPTLRNSALFCIF*GTGSKQ
Trigger: TTGCTTGCTTCCAGTGCCCCAAAATATGCAAAACAG...AGCACTGTTTCTGAGGGTTGGGGAGATAGAATATGGAAGGACAGGGCTCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR TCA 90 bp AACATTTGGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTCGCCTTGTTACAATACTaGCAGATGAACTCCTTCACG +
Preference number: 4 (lower is better)
Translates to: NIWCEKQESSDNLPALAFALLQY*QMNSFT
Trigger: CGTGAAGGAGTTCATCTGTCAGTATTGTAACAAGGC...GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp TTTTGCCTACCCCAAACCACACTAAGCCTTCTTCATGGAGACAACACAACATTTGGATATCCCCTTCATTaGTGGGAGGCTCTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: FCLPQTTLSLLHGDNTTFGYPLH*WEALSV
Trigger: CACACTCAGAGCCTCCCAGCAATGAAGGGGATATCC...AAATGTTGTGTTGTCTCCATGAAGAAGGCTTAGTGTGGTTTGGGGTAGGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp GAGCCTGTTGTTAACCACTATGTACCTGTGGGCTGCATTATCTCCAAGGATGTGGGCATTTCAGAGCTTTaGAGATTCGGAACGATGAAC +
Preference number: 4 (lower is better)
Translates to: EPVVNHYVPVGCIISKDVGISEL*RFGTMN
Trigger: GTTCATCGTTCCGAATCTGCAAAGCTCTGAAATGCC...CACATCCTTGGAGATAATGCAGCCCACAGGTACATAGTGGTTAACAACAGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp AACATTTGGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTCGCTTTTGGGTCTGCTTaGAGGTTTACTGGCTTTATC +
Preference number: 4 (lower is better)
Translates to: NIWCEKQESSDNLPALAFAFGSA*RFTGFI
Trigger: GATAAAGCCAGTAAACCTGCAAGCAGACCCAAAAGC...GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp GGACAGAGCCCTGTCCTTCCATATTCTATCTCCCCAACCCTCAGAAACAGTGCTGGGCAGAGCAGGTTTTaGGATATAAGTTTCAATCTT +
Preference number: 4 (lower is better)
Translates to: GQSPVLPYSISPTLRNSAGQSRF*DISFNL
Trigger: AAGATTGAAACTTATATCGCAAAACCTGCTCTGCCC...AGCACTGTTTCTGAGGGTTGGGGAGATAGAATATGGAAGGACAGGGCTCTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp TGTCCACTGTTTACACTTCAGTTCTACTTGGTCTTTACGTACTCGATGCAAACTGAGGAGCTCTGGAACTaGTTTGCACAGAGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: CPLFTLQFYLVFTYSMQTEELWN*FAQSSQ
Trigger: CTGCGAGCTCTGTGCAAAGCAGTTCCAGAGCTCCTC...AGTTTGCATCGAGTACGTAAAGACCAAGTAGAACTGAAGTGTAAACAGTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp TGGATGCTTCTGAGTCCTGTCTGTAAGGGACAGAGCCCTGTCCTTCCATATTCTGCTGCTCATTTAAGATaGAGAGTACTGTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: WMLLSPVCKGQSPVLPYSAAHLR*RVLCHC
Trigger: ACAGTGACACAGTACTCTCCATCTTAAATGAGCAGC...AGAATATGGAAGGACAGGGCTCTGTCCCTTACAGACAGGACTCAGAAGCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp TTTTGCCTACCCCAAACCACACTAAGCCTTCTTCATGGAGACAACACAACATTTCGCGTTTGTGATCCTTaGCCCATTAGTGACAGCTGG +
Preference number: 4 (lower is better)
Translates to: FCLPQTTLSLLHGDNTTFRVCDP*PISDSW
Trigger: CCAGCTGTCACTAATGGGCCAAGGATCACAAACGCG...AAATGTTGTGTTGTCTCCATGAAGAAGGCTTAGTGTGGTTTGGGGTAGGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp TTTTGCCTACCCCAAACCACACTAAGCCTTCTTCATGGAGACAACACAACATTTTCTCCTGGCAAAGGCTaGCTGTCCTCATGGAATCAG +
Preference number: 4 (lower is better)
Translates to: FCLPQTTLSLLHGDNTTFSPGKG*LSSWNQ
Trigger: CTGATTCCATGAGGACAGCCAGCCTTTGCCAGGAGA...AAATGTTGTGTTGTCTCCATGAAGAAGGCTTAGTGTGGTTTGGGGTAGGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp GAGCCTGTTGTTAACCACTATGTACCTGTGGGCTGCATTATCTCCAAGGATGTGATGGCTTCGCTTTTGTaGCAAGAGCATCACCAGTTT +
Preference number: 4 (lower is better)
Translates to: EPVVNHYVPVGCIISKDVMASLL*QEHHQF
Trigger: AAACTGGTGATGCTCTTGCCACAAAAGCGAAGCCAT...CACATCCTTGGAGATAATGCAGCCCACAGGTACATAGTGGTTAACAACAGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp AACATTTGGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTCGCTCACACTGCAGCTTaGGCATCTCTTTATTCTCTT +
Preference number: 4 (lower is better)
Translates to: NIWCEKQESSDNLPALAFAHTAA*ASLYSL
Trigger: AAGAGAATAAAGAGATGCCCAAGCTGCAGTGTGAGC...GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp TACCTGTGGGCTGCATTATCTCCAAGGATGTGTAAGATTGAGGAATTAGGCTTTAGTGTGGAGGAGCTCTaGAACTGCTTTGCACAGAGC +
Preference number: 4 (lower is better)
Translates to: YLWAALSPRMCKIEELGFSVEEL*NCFAQS
Trigger: GCTCTGTGCAAAGCAGTTCCAGAGCTCCTCCACACT...AAAGCCTAATTCCTCAATCTTACACATCCTTGGAGATAATGCAGCCCACAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp AACATTTGGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTCCATATTTTGGGGCACTaGAAGCAAGCAAAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: NIWCEKQESSDNLPALAFHILGH*KQAKPF
Trigger: GAAAGGCTTTGCTTGCTTCCAGTGCCCCAAAATATG...GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR TCA 90 bp TTTTGCCTACCCCAAACCACACTAAGCCTTCTTCATGGAGACAACACAACATTTAGGACCTGGGGAATTTaGGAAGTTGCGGTCACTAAG +
Preference number: 4 (lower is better)
Translates to: FCLPQTTLSLLHGDNTTFRTWGI*EVAVTK
Trigger: CTTAGTGACCGCAACTTCTCAAATTCCCCAGGTCCT...AAATGTTGTGTTGTCTCCATGAAGAAGGCTTAGTGTGGTTTGGGGTAGGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR TCA 90 bp AACATTTGGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTCAATCAGACACCTTTTTaGAGCTTGCTCTCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: NIWCEKQESSDNLPALAFNQTPF*SLLSSP
Trigger: TGGACTTGAGAGCAAGCTTCAAAAAGGTGTCTGATT...GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR TCA 90 bp GAGCCTGTTGTTAACCACTATGTACCTGTGGGCTGCATTATCTCCAAGGATGTGCATATTTTCTGTGGTTaGGTCAGAATCCTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: EPVVNHYVPVGCIISKDVHIFCG*VRILGL
Trigger: CAAACCCAGGATTCTGACTCAACCACAGAAAATATG...CACATCCTTGGAGATAATGCAGCCCACAGGTACATAGTGGTTAACAACAGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp GAGCCTGTTGTTAACCACTATGTACCTGTGGGCTGCATTATCTCCAAGGATGTGTCACATAACTACGTTTaGACACGATGCAGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: EPVVNHYVPVGCIISKDVSHNYV*TRCSCR
Trigger: TCTACAGCTGCATCGTGTGCAAACGTAGTTATGTGA...CACATCCTTGGAGATAATGCAGCCCACAGGTACATAGTGGTTAACAACAGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp TGGGAGATATCAGGATTATCTGACCCCTTAAGTCTGGGTAGGGTAGCCCCCAACGAAATGCAGATCGTATaGCTCCAAAAGATGTTTTTG +
Preference number: 4 (lower is better)
Translates to: WEISGLSDPLSLGRVAPNEMQIV*LQKMFL
Trigger: CAAAAACATCTTTTGGAGCCATACGATCTGCATTTC...GTTGGGGGCTACCCTACCCAGACTTAAGGGGTCAGATAATCCTGATATCTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp TGGATGCTTCTGAGTCCTGTCTGTAAGGGACAGAGCCCTGTCCTTCCATATTCTTATAAGTGTTTCTTTTaGTGCATTCTGAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: WMLLSPVCKGQSPVLPYSYKCFF*CILRAA
Trigger: TGCTGCCCTCAGAATGCACCAAAAGAAACACTTATA...AGAATATGGAAGGACAGGGCTCTGTCCCTTACAGACAGGACTCAGAAGCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR TCA 90 bp TGGATGCTTCTGAGTCCTGTCTGTAAGGGACAGAGCCCTGTCCTTCCATATTCTTCCAAAAGATGTTTTTaGAATAAAGACTTGAGGCGG +
Preference number: 4 (lower is better)
Translates to: WMLLSPVCKGQSPVLPYSSKRCF*NKDLRR
Trigger: CCGCCTCAAGTCTTTATTTCAAAAACATCTTTTGGA...AGAATATGGAAGGACAGGGCTCTGTCCCTTACAGACAGGACTCAGAAGCATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp TACCTGTGGGCTGCATTATCTCCAAGGATGTGTAAGATTGAGGAATTAGGCTTTATGCCCCGAATGCGCTaGTCATTTAAGATGGAGAGT +
Preference number: 4 (lower is better)
Translates to: YLWAALSPRMCKIEELGFMPRMR*SFKMES
Trigger: ACTCTCCATCTTAAATGAGCAGCGCATTCGGGGCAT...AAAGCCTAATTCCTCAATCTTACACATCCTTGGAGATAATGCAGCCCACAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp TTTTGCCTACCCCAAACCACACTAAGCCTTCTTCATGGAGACAACACAACATTTGCGCAAAGACCTTGTTaGAGTAATGGCAAGGGTATG +
Preference number: 4 (lower is better)
Translates to: FCLPQTTLSLLHGDNTTFAQRPC*SNGKGM
Trigger: CATACCCTTGCCATTACTGCAACAAGGTCTTTGCGC...AAATGTTGTGTTGTCTCCATGAAGAAGGCTTAGTGTGGTTTGGGGTAGGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp TACCTGTGGGCTGCATTATCTCCAAGGATGTGTAAGATTGAGGAATTAGGCTTTTTTCAAGACAGAAAATaGACTGGTACCGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: YLWAALSPRMCKIEELGFFQDRK*TGTASP
Trigger: GGGAGAGGCGGTACCAGTGCATTTTCTGTCTTGAAA...AAAGCCTAATTCCTCAATCTTACACATCCTTGGAGATAATGCAGCCCACAGGTA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp TACCTGTGGGCTGCATTATCTCCAAGGATGTGTAAGATTGAGGAATTAGGCTTTAAAGGGGTGCAACATTaGTATTTGTGGAGGTACCGG +
Preference number: 4 (lower is better)
Translates to: YLWAALSPRMCKIEELGFKGVQH*YLWRYR
Trigger: CCGGTACCTCCACAAATAGCAATGTTGCACCCCTTT...AAAGCCTAATTCCTCAATCTTACACATCCTTGGAGATAATGCAGCCCACAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp TTTTGCCTACCCCAAACCACACTAAGCCTTCTTCATGGAGACAACACAACATTTTGCTTGCAGGTTTACTaGCTTTATCTGTCTCGGGCT +
Preference number: 4 (lower is better)
Translates to: FCLPQTTLSLLHGDNTTFCLQVY*LYLSRA
Trigger: AGCCCGAGACAGATAAAGCCAGTAAACCTGCAAGCA...AAATGTTGTGTTGTCTCCATGAAGAAGGCTTAGTGTGGTTTGGGGTAGGCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
3UTR CAA 72 bp AACCTTCCAGCCTTGGCTTTCCATCTACTAAACCCATaGAACAGGAATGGCTGCTTGAACTGTTCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: NLPALAFHLLNP*NRNGCLNCSEF
Trigger: AAACTCAGAACAGTTCAAGCAGCCATTCCTGTTCAATGGGTTTAGTAGATGGAAAGCCAAGGCTGGAAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp TTTTGCCTACCCCAAACCACACTAAGCCTTCTTCATGGAGACAACACAACATTTTTGGTTTTCACTGCCTaGTTCCTCCATTTGATGCCT +
Preference number: 4 (lower is better)
Translates to: FCLPQTTLSLLHGDNTTFLVFTA*FLHLMP
Trigger: AGGCATCAAATGGAGGAAGCAGGCAGTGAAAACCAA...AAATGTTGTGTTGTCTCCATGAAGAAGGCTTAGTGTGGTTTGGGGTAGGCAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp TACCTGTGGGCTGCATTATCTCCAAGGATGTGTAAGATTGAGGAATTAGGCTTTAAGTGTTTCTTTTGGTaGATTCTGAGGGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: YLWAALSPRMCKIEELGFKCFFW*ILRAAA
Trigger: AGCTGCTGCCCTCAGAATGCACCAAAAGAAACACTT...AAAGCCTAATTCCTCAATCTTACACATCCTTGGAGATAATGCAGCCCACAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp AACATTTGGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTCATTTTTACTGTTATCTaGCAAAGGGGTGCAACATTG +
Preference number: 4 (lower is better)
Translates to: NIWCEKQESSDNLPALAFIFTVI*QRGATL
Trigger: CAATGTTGCACCCCTTTGCCAGATAACAGTAAAAAT...GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp GAGCCTGTTGTTAACCACTATGTACCTGTGGGCTGCATTATCTCCAAGGATGTGTATGCCTTTTCACGATaGCTTCGTTCCCAATTTTTA +
Preference number: 4 (lower is better)
Translates to: EPVVNHYVPVGCIISKDVYAFSR*LRSQFL
Trigger: TAAAAATTGGGAACGAAGCCATCGTGAAAAGGCATA...CACATCCTTGGAGATAATGCAGCCCACAGGTACATAGTGGTTAACAACAGGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR TCA 90 bp TGTCCACTGTTTACACTTCAGTTCTACTTGGTCTTTACGTACTCGATGCAAACTTTCCGGGCTTCTGAATaGAGTTCCATCTTGACCAAT +
Preference number: 4 (lower is better)
Translates to: CPLFTLQFYLVFTYSMQTFRASE*SSILTN
Trigger: ATTGGTCAAGATGGAACTTCATTCAGAAGCCCGGAA...AGTTTGCATCGAGTACGTAAAGACCAAGTAGAACTGAAGTGTAAACAGTGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp TTTTGCCTACCCCAAACCACACTAAGCCTTCTTCATGGAGACAACACAACATTTTCGCCTGTTTCCTCTTaGTTAGGTAAGGTCTTGTAT +
Preference number: 4 (lower is better)
Translates to: FCLPQTTLSLLHGDNTTFSPVSS*LGKVLY
Trigger: ATACAAGACCTTACCTAAGCAAGAGGAAACAGGCGA...AAATGTTGTGTTGTCTCCATGAAGAAGGCTTAGTGTGGTTTGGGGTAGGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp AACATTTGGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTCGTTTGGATTTCTTCTTaGGTTTGTAGTTGTAGTATG +
Preference number: 4 (lower is better)
Translates to: NIWCEKQESSDNLPALAFVWISS*VCSCSM
Trigger: CATACTACAACTACAAACCCAAGAAGAAATCCAAAC...GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CCA 90 bp AACATTTGGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTCTTTTTCTCAGCTGTTTaGATTTCTTCTTGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: NIWCEKQESSDNLPALAFFFSAV*ISSWVC
Trigger: ACAAACCCAAGAAGAAATCCAAACAGCTGAGAAAAA...GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR TCA 90 bp TGTCCACTGTTTACACTTCAGTTCTACTTGGTCTTTACGTACTCGATGCAAACTGTCTCTTCCTGCATTTaGTACTTAGGTTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: CPLFTLQFYLVFTYSMQTVSSCI*YLGFLP
Trigger: AGGGAGAAAACCTAAGTATCAAATGCAGGAAGAGAC...AGTTTGCATCGAGTACGTAAAGACCAAGTAGAACTGAAGTGTAAACAGTGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp TACCTGTGGGCTGCATTATCTCCAAGGATGTGTAAGATTGAGGAATTAGGCTTTATCAGCAATATATTTTaGCTCCTCTGTTATTTCTCC +
Preference number: 4 (lower is better)
Translates to: YLWAALSPRMCKIEELGFISNIF*LLCYFS
Trigger: GGAGAAATAACAGAGGAGGCAAAATATATTGCTGAT...AAAGCCTAATTCCTCAATCTTACACATCCTTGGAGATAATGCAGCCCACAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR GCA 90 bp TGTCCACTGTTTACACTTCAGTTCTACTTGGTCTTTACGTACTCGATGCAAACTACTCACTTCATCAAATaGTTCACTCATCTCTACACA +
Preference number: 4 (lower is better)
Translates to: CPLFTLQFYLVFTYSMQTTHFIK*FTHLYT
Trigger: TGTGTAGAGATGAGTGAAGCATTTGATGAAGTGAGT...AGTTTGCATCGAGTACGTAAAGACCAAGTAGAACTGAAGTGTAAACAGTGGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS GCA 90 bp CGAAGTGAGATGCTGGTGGGGCTTGCCTTCGGCTCCCGCCCCTGCTaGCCCATCAGGGCAGCCATCACAGAGCTCACACTGCAGCTTGGG +
Preference number: 5 (lower is better)
Translates to: RSEMLVGLAFGSRPC*PIRAAITELTLQLG
Trigger: CCCAAGCTGCAGTGTGAGCTCTGTGATGGCTGCCCTGATGGGGCAGCAGGGGCGGGAGCCGAAGGCAAGCCCCACCAGCATCTCACTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093798.9
ENSMUST00000152594.8
CDS TCA 90 bp AGCTGCTGTCCTGTTCCCTCGGAGGCTGACTCCTGTAGGCCTCAGTaGTGGACGAGACGGCATACGAGTGCTCAGCAAGCGTGCGGACAG +
Preference number: 5 (lower is better)
Translates to: SCCPVPSEADSCRPQ*WTRRHTSAQQACGQ
Trigger: CTGTCCGCACGCTTGCTGAGCACTCGTATGCCGTCTCGTCCATCACTGAGGCCTACAGGAGTCAGCCTCCGAGGGAACAGGACAGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS TCA 90 bp TCTGGAACTGCTTTGCACAGAGCTCGCAGATGTAAGGCTTCGAAGTaGGATGCTGGTGGGGCTTGCCTTCGGCTCCCGCCCCTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: SGTALHRARRCKASK*DAGGACLRLPPLLP
Trigger: GGGCAGCAGGGGCGGGAGCCGAAGGCAAGCCCCACCAGCATCTCACTTCGAAGCCTTACATCTGCGAGCTCTGTGCAAAGCAGTTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093798.9
ENSMUST00000152594.8
CDS CCA 90 bp ACGGCATACGAGTGCTCAGCAAGCGTGCGGACAGGCTCTACCTCATaGCAGACGCTGGCTCTCTCCTGGCAAAGGCTGGCTGTCCTCATG +
Preference number: 5 (lower is better)
Translates to: TAYECSASVRTGSTS*QTLALSWQRLAVLM
Trigger: CATGAGGACAGCCAGCCTTTGCCAGGAGAGAGCCAGCGTCTGCCATGAGGTAGAGCCTGTCCGCACGCTTGCTGAGCACTCGTATGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS TCA 90 bp CTCGGGCTTGCTGTCCTTGATCAGGGACGGGCTGACCACCGGTTGTaGAGGGGACTTGTGGTTGCTGTTGGTCAGGCTAGCGATGGTGTT +
Preference number: 5 (lower is better)
Translates to: LGLAVLDQGRADHRL*RGLVVAVGQASDGV
Trigger: AACACCATCGCTAGCCTGACCAACAGCAACCACAAGTCCCCTTCACAACCGGTGGTCAGCCCGTCCCTGATCAAGGACAGCAAGCCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS GCA 90 bp CCTCCTGGGATGGGCACGTGGCTAGACCTCATGCAGATCTGCTCGTaGCGGTCCAGTCTGTTGAGGGTGGTGAACTGCTTGTTGCAGTAC +
Preference number: 5 (lower is better)
Translates to: PPGMGTWLDLMQICS*RSSLLRVVNCLLQY
Trigger: GTACTGCAACAAGCAGTTCACCACCCTCAACAGACTGGACCGGCACGAGCAGATCTGCATGAGGTCTAGCCACGTGCCCATCCCAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS GCA 90 bp GGGTTTCCTCCTGGGATGGGCACGTGGCTAGACCTCATGCAGATCTaGTCGTGCCGGTCCAGTCTGTTGAGGGTGGTGAACTGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: GFPPGMGTWLDLMQI*SCRSSLLRVVNCLL
Trigger: CAACAAGCAGTTCACCACCCTCAACAGACTGGACCGGCACGAGCAGATCTGCATGAGGTCTAGCCACGTGCCCATCCCAGGAGGAAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CCA 90 bp AGTGCTCAGCAAGCGTGCGGACAGGCTCTACCTCATGGCAGACGCTaGCTCTCTCCTGGCAAAGGCTGGCTGTCCTCATGGAATCAGACA +
Preference number: 5 (lower is better)
Translates to: SAQQACGQALPHGRR*LSPGKGWLSSWNQT
Trigger: TGTCTGATTCCATGAGGACAGCCAGCCTTTGCCAGGAGAGAGCCAGCGTCTGCCATGAGGTAGAGCCTGTCCGCACGCTTGCTGAGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp ATCCTGGGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTTGCCGGTCCAGTCTGTaGAGGGTGGTGAACTGCTTG +
Preference number: 5 (lower is better)
Translates to: ILGLEGQGVLSLPPILEVCRSSL*RVVNCL
Trigger: CAAGCAGTTCACCACCCTCAACAGACTGGACCGGCA...AACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCCCAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp ATCCTGGGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTGAGGCGGCCAGGACATaGCTGTGGGCTTTAAACTTG +
Preference number: 5 (lower is better)
Translates to: ILGLEGQGVLSLPPILEVEAART*LWALNL
Trigger: CAAGTTTAAAGCCCACAGCAATGTCCTGGCCGCCTC...AACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCCCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp ATCCTGGGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTGTCAGAATCCTGGGTTaGGGGCTTTGGCTTTCGGCA +
Preference number: 5 (lower is better)
Translates to: ILGLEGQGVLSLPPILEVVRILG*GLWLSA
Trigger: TGCCGAAAGCCAAAGCCCCAAACCCAGGATTCTGAC...AACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCCCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp GGACAGAGCCCTGTCCTTCCATATTCTATCTCCCCAACCCTCAGAAACAGTGCTGGCTCCTGGGTCGGCTaGTGGAGCTGCATGTGGGCA +
Preference number: 5 (lower is better)
Translates to: GQSPVLPYSISPTLRNSAGSWVG*WSCMWA
Trigger: TGCCCACATGCAGCTCCACAAGCCGACCCAGGAGCC...AGCACTGTTTCTGAGGGTTGGGGAGATAGAATATGGAAGGACAGGGCTCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS TCA 90 bp ACACAAAAGGCTCCTGGGTCGGCTTGTGGAGCTGCATGTGGGCACTaGGCAGCGTGCTGCTGTCAAAGGACTTGGAACAACAGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: TQKAPGSACGAACGH*AACCCQRTWNNSCS
Trigger: ACTGCAGCTGTTGTTCCAAGTCCTTTGACAGCAGCACGCTGCTCAGTGCCCACATGCAGCTCCACAAGCCGACCCAGGAGCCTTTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS GCA 90 bp GGGGACTTGTGGTTGCTGTTGGTCAGGCTAGCGATGGTGTTGCTGTaGTTGATCACCGACGAGAACTGGCTGCTGTGCACAATGACGGAG +
Preference number: 5 (lower is better)
Translates to: GDLWLLLVRLAMVLL*LITDENWLLCTMTE
Trigger: CTCCGTCATTGTGCACAGCAGCCAGTTCTCGTCGGTGATCAAGCACAGCAACACCATCGCTAGCCTGACCAACAGCAACCACAAGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CCA 90 bp AGCGTGCGGACAGGCTCTACCTCATGGCAGACGCTGGCTCTCTCCTaGCAAAGGCTGGCTGTCCTCATGGAATCAGACACCTTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: SVRTGSTSWQTLALS*QRLAVLMESDTFLK
Trigger: CTTCAAAAAGGTGTCTGATTCCATGAGGACAGCCAGCCTTTGCCAGGAGAGAGCCAGCGTCTGCCATGAGGTAGAGCCTGTCCGCACGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CCA 90 bp TGCTTGTTGCAGTACTTGCACACAAAAGGCTCCTGGGTCGGCTTGTaGAGCTGCATGTGGGCACTGAGCAGCGTGCTGCTGTCAAAGGAC +
Preference number: 5 (lower is better)
Translates to: CLLQYLHTKGSWVGL*SCMWALSSVLLSKD
Trigger: GTCCTTTGACAGCAGCACGCTGCTCAGTGCCCACATGCAGCTCCACAAGCCGACCCAGGAGCCTTTTGTGTGCAAGTACTGCAACAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp GGACAGAGCCCTGTCCTTCCATATTCTATCTCCCCAACCCTCAGAAACAGTGCTTCGGGCTTGCTGTCCTaGATCAGGGACGGGCTGACC +
Preference number: 5 (lower is better)
Translates to: GQSPVLPYSISPTLRNSASGLLS*IRDGLT
Trigger: GGTCAGCCCGTCCCTGATCAAGGACAGCAAGCCCGA...AGCACTGTTTCTGAGGGTTGGGGAGATAGAATATGGAAGGACAGGGCTCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS GCA 90 bp CTTGGAACAACAGCTGCAGTTATAAACGAGGGGCGGGACCTCTGCTaGTCCTGGACCCGGAGCATCAGAGGGCTGATTTTCATCTTCCCT +
Preference number: 5 (lower is better)
Translates to: LGTTAAVINEGRDLC*SWTRSIRGLIFIFP
Trigger: AGGGAAGATGAAAATCAGCCCTCTGATGCTCCGGGTCCAGGAGCAGCAGAGGTCCCGCCCCTCGTTTATAACTGCAGCTGTTGTTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS GCA 90 bp GGACTTGGAACAACAGCTGCAGTTATAAACGAGGGGCGGGACCTCTaGTGCTCCTGGACCCGGAGCATCAGAGGGCTGATTTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: GLGTTAAVINEGRDL*CSWTRSIRGLIFIF
Trigger: GAAGATGAAAATCAGCCCTCTGATGCTCCGGGTCCAGGAGCAGCAGAGGTCCCGCCCCTCGTTTATAACTGCAGCTGTTGTTCCAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS GCA 90 bp TTGCAGTACTTGCACACAAAAGGCTCCTGGGTCGGCTTGTGGAGCTaGATGTGGGCACTGAGCAGCGTGCTGCTGTCAAAGGACTTGGAA +
Preference number: 5 (lower is better)
Translates to: LQYLHTKGSWVGLWS*MWALSSVLLSKDLE
Trigger: TTCCAAGTCCTTTGACAGCAGCACGCTGCTCAGTGCCCACATGCAGCTCCACAAGCCGACCCAGGAGCCTTTTGTGTGCAAGTACTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS GCA 90 bp ATGCAGATCTGCTCGTGCCGGTCCAGTCTGTTGAGGGTGGTGAACTaGTTGTTGCAGTACTTGCACACAAAAGGCTCCTGGGTCGGCTTG +
Preference number: 5 (lower is better)
Translates to: MQICSCRSSLLRVVN*LLQYLHTKGSWVGL
Trigger: CAAGCCGACCCAGGAGCCTTTTGTGTGCAAGTACTGCAACAAGCAGTTCACCACCCTCAACAGACTGGACCGGCACGAGCAGATCTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CCA 90 bp ACAACAGCTGCAGTTATAAACGAGGGGCGGGACCTCTGCTGCTCCTaGACCCGGAGCATCAGAGGGCTGATTTTCATCTTCCCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: TTAAVINEGRDLCCS*TRSIRGLIFIFPGK
Trigger: TTTCCCAGGGAAGATGAAAATCAGCCCTCTGATGCTCCGGGTCCAGGAGCAGCAGAGGTCCCGCCCCTCGTTTATAACTGCAGCTGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CCA 90 bp TACTTGCACACAAAAGGCTCCTGGGTCGGCTTGTGGAGCTGCATGTaGGCACTGAGCAGCGTGCTGCTGTCAAAGGACTTGGAACAACAG +
Preference number: 5 (lower is better)
Translates to: YLHTKGSWVGLWSCM*ALSSVLLSKDLEQQ
Trigger: CTGTTGTTCCAAGTCCTTTGACAGCAGCACGCTGCTCAGTGCCCACATGCAGCTCCACAAGCCGACCCAGGAGCCTTTTGTGTGCAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CCA 90 bp TTGACCAATAGTGGGGTAGTTTTCCAAGAACGGTGGGTTTCCTCCTaGGATGGGCACGTGGCTAGACCTCATGCAGATCTGCTCGTGCCG +
Preference number: 5 (lower is better)
Translates to: LTNSGVVFQERWVSS*DGHVARPHADLLVP
Trigger: CGGCACGAGCAGATCTGCATGAGGTCTAGCCACGTGCCCATCCCAGGAGGAAACCCACCGTTCTTGGAAAACTACCCCACTATTGGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CCA 90 bp CAAATTTCACCATGTGGTCCGCGTCTGACAAGGCACTCCCCGCGCTaGATAGTTCGCCAATCCTATTTTCTGGCCCTAATGATTCCGGGC +
Preference number: 5 (lower is better)
Translates to: QISPCGPRLTRHSPR*IVRQSYFLALMIPG
Trigger: GCCCGGAATCATTAGGGCCAGAAAATAGGATTGGCGAACTATCCAGCGCGGGGAGTGCCTTGTCAGACGCGGACCACATGGTGAAATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CCA 90 bp TCCCATCATGCTCCCGGATGTGCCTCCGCTCGTGGTTCCGTTTGGTaGAGAGATACAAGAAACCCTGAAAGCAGAACTGACAGTGGTAGC +
Preference number: 5 (lower is better)
Translates to: SHHAPGCASARGSVW*RDTRNPESRTDSGS
Trigger: GCTACCACTGTCAGTTCTGCTTTCAGGGTTTCTTGTATCTCTCCACCAAACGGAACCACGAGCGGAGGCACATCCGGGAGCATGATGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093798.9
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp ATCCTGGGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTCTGCTGTCAAAGGACTaGGAACAACAGCTGCAGTTA +
Preference number: 5 (lower is better)
Translates to: ILGLEGQGVLSLPPILEVLLSKD*EQQLQL
Trigger: TAACTGCAGCTGTTGTTCCAAGTCCTTTGACAGCAG...AACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCCCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS TCA 90 bp TGCCCACAGATGAAACACATGCGGGCTCTGTCTGTAGGGTGGCGCTaGCGGTGTTTCCAGTGGAAGAAACTGACACCTCAGTTGAATCGA +
Preference number: 5 (lower is better)
Translates to: CPQMKHMRALSVGWR*RCFQWKKLTPQLNR
Trigger: TCGATTCAACTGAGGTGTCAGTTTCTTCCACTGGAAACACCGTCAGCGCCACCCTACAGACAGAGCCCGCATGTGTTTCATCTGTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS GCA 90 bp GCGCCACGGCTTATCAGTGGAGTCCTGGTCACTCACTTCATCAAATaGTTCACTCATCTCTACACATTCAGCCTGGCAAAGCCCAAGGGG +
Preference number: 5 (lower is better)
Translates to: APRLISGVLVTHFIK*FTHLYTFSLAKPKG
Trigger: CCCCTTGGGCTTTGCCAGGCTGAATGTGTAGAGATGAGTGAAGCATTTGATGAAGTGAGTGACCAGGACTCCACTGATAAGCCGTGGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CCA 90 bp CTTTCCCATCATGCTCCCGGATGTGCCTCCGCTCGTGGTTCCGTTTaGTGGAGAGATACAAGAAACCCTGAAAGCAGAACTGACAGTGGT +
Preference number: 5 (lower is better)
Translates to: LSHHAPGCASARGSV*WRDTRNPESRTDSG
Trigger: ACCACTGTCAGTTCTGCTTTCAGGGTTTCTTGTATCTCTCCACCAAACGGAACCACGAGCGGAGGCACATCCGGGAGCATGATGGGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093798.9
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp TGGGAGATATCAGGATTATCTGACCCCTTAAGTCTGGGTAGGGTAGCCCCCAACAGGCTAGCGATGGTGTaGCTGTGCTTGATCACCGAC +
Preference number: 5 (lower is better)
Translates to: WEISGLSDPLSLGRVAPNRLAMV*LCLITD
Trigger: GTCGGTGATCAAGCACAGCAACACCATCGCTAGCCT...GTTGGGGGCTACCCTACCCAGACTTAAGGGGTCAGATAATCCTGATATCTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS GCA 90 bp GCATCTCATGTGCATCTTGAGTGTGGAGGAGCTCTGGAACTGCTTTaGACAGAGCTCGCAGATGTAAGGCTTCGAAGTGAGATGCTGGTG +
Preference number: 5 (lower is better)
Translates to: ASHVHLECGGALELL*TELADVRLRSEMLV
Trigger: CACCAGCATCTCACTTCGAAGCCTTACATCTGCGAGCTCTGTGCAAAGCAGTTCCAGAGCTCCTCCACACTCAAGATGCACATGAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093798.9
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp GGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTTTAACAGGGGAATTTGAGAAGTaGCGGTCACTAAGGTCTTCT +
Preference number: 5 (lower is better)
Translates to: GLEGQGVLSLPPILEVLTGEFEK*RSLRSS
Trigger: AGAAGACCTTAGTGACCGCAACTTCTCAAATTCCCC...TGTTAAAACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp GGACAGAGCCCTGTCCTTCCATATTCTATCTCCCCAACCCTCAGAAACAGTGCTTGGATATCCCCTTCATaGCTGGGAGGCTCTGAGTGT +
Preference number: 5 (lower is better)
Translates to: GQSPVLPYSISPTLRNSAWISPS*LGGSEC
Trigger: ACACTCAGAGCCTCCCAGCAATGAAGGGGATATCCA...AGCACTGTTTCTGAGGGTTGGGGAGATAGAATATGGAAGGACAGGGCTCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp CTGCTGTTAGAGGCAAAGGAGGTCACCAGGTCCCCTTGTCCCCATGTTATCAGTTGCTTGTTGCAGTACTaGCACACAAAAGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LLLEAKEVTRSPCPHVISCLLQY*HTKGSW
Trigger: CCAGGAGCCTTTTGTGTGCAAGTACTGCAACAAGCA...ACTGATAACATGGGGACAAGGGGACCTGGTGACCTCCTTTGCCTCTAACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp TGGGAGATATCAGGATTATCTGACCCCTTAAGTCTGGGTAGGGTAGCCCCCAACAGCTCTGGAACTGCTTaGCACAGAGCTCGCAGATGT +
Preference number: 5 (lower is better)
Translates to: WEISGLSDPLSLGRVAPNSSGTA*HRARRC
Trigger: ACATCTGCGAGCTCTGTGCAAAGCAGTTCCAGAGCT...GTTGGGGGCTACCCTACCCAGACTTAAGGGGTCAGATAATCCTGATATCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp TGGGAGATATCAGGATTATCTGACCCCTTAAGTCTGGGTAGGGTAGCCCCCAACAGGGCAGCAGCTGTTTaGCATATTTTGGGGCACTGG +
Preference number: 5 (lower is better)
Translates to: WEISGLSDPLSLGRVAPNRAAAV*HILGHW
Trigger: CCAGTGCCCCAAAATATGCAAAACAGCTGCTGCCCT...GTTGGGGGCTACCCTACCCAGACTTAAGGGGTCAGATAATCCTGATATCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS CCA 90 bp CTGCTGCCCCATCAGGGCAGCCATCACAGAGCTCACACTGCAGCTTaGGCATCTCTTTATTCTCTTCTTCTTCTTCTTCTTCTTCGAAGG +
Preference number: 5 (lower is better)
Translates to: LLPHQGSHHRAHTAA*ASLYSLLLLLLLRR
Trigger: CCTTCGAAGAAGAAGAAGAAGAAGAAGAGAATAAAGAGATGCCCAAGCTGCAGTGTGAGCTCTGTGATGGCTGCCCTGATGGGGCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093798.9
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp TTGTGGATGCTTCTGAGTCCTGTCTGTAAGGGACAGAGCCCTGTCCTTCCATATCGTGTTTCTGCCATCTaGGAAGTCCAGTGTGGGCAT +
Preference number: 5 (lower is better)
Translates to: LWMLLSPVCKGQSPVLPYRVSAI*EVQCGH
Trigger: ATGCCCACACTGGACTTCCAAGATGGCAGAAACACG...ATATGGAAGGACAGGGCTCTGTCCCTTACAGACAGGACTCAGAAGCATCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp TGGATGCTTCTGAGTCCTGTCTGTAAGGGACAGAGCCCTGTCCTTCCATATTCTTTATCTGTCTCGGGCTaGCTGTCCTTGATCAGGGAC +
Preference number: 5 (lower is better)
Translates to: WMLLSPVCKGQSPVLPYSLSVSG*LSLIRD
Trigger: GTCCCTGATCAAGGACAGCAAGCCCGAGACAGATAA...AGAATATGGAAGGACAGGGCTCTGTCCCTTACAGACAGGACTCAGAAGCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp TTGTGGATGCTTCTGAGTCCTGTCTGTAAGGGACAGAGCCCTGTCCTTCCATATCATCTCATGTGCATCTaGAGTGTGGAGGAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: LWMLLSPVCKGQSPVLPYHLMCI*SVEELW
Trigger: CCAGAGCTCCTCCACACTCAAGATGCACATGAGATG...ATATGGAAGGACAGGGCTCTGTCCCTTACAGACAGGACTCAGAAGCATCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS TCA 90 bp GGCTCTGAGTGTGACAGATCTGGAGCTGGCTGTGGGCTTCTTTCTTaGTTCACCTCTGGGCAGGTTACTAGAGAGAGTGGCATATTTTCT +
Preference number: 5 (lower is better)
Translates to: GSECDRSGAGCGLLS*FTSGQVTRESGIFS
Trigger: AGAAAATATGCCACTCTCTCTAGTAACCTGCCCAGAGGTGAATCAAGAAAGAAGCCCACAGCCAGCTCCAGATCTGTCACACTCAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS TCA 90 bp TGGATCTTGAGCGTCTCGTTGAGTGTGAATGCCTTGTTACAATACTaGCAGATGAACTCCTTCACGCCCAGGTGTATGCGCTCGTGCTTC +
Preference number: 5 (lower is better)
Translates to: WILSVSLSVNALLQY*QMNSFTPRCMRSCF
Trigger: GAAGCACGAGCGCATACACCTGGGCGTGAAGGAGTTCATCTGTCAGTATTGTAACAAGGCATTCACACTCAACGAGACGCTCAAGATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093798.9
ENSMUST00000152594.8
CDS GCA 90 bp CATTTGCATGCCGCCGGAGGCTGGACAAAGTCACATAACTACGTTTaGACACGATGCAGCTGTAGAGCATCTGCCCGTTCACAAATTTCA +
Preference number: 5 (lower is better)
Translates to: HLHAAGGWTKSHNYV*TRCSCRASARSQIS
Trigger: TGAAATTTGTGAACGGGCAGATGCTCTACAGCTGCATCGTGTGCAAACGTAGTTATGTGACTTTGTCCAGCCTCCGGCGGCATGCAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CCA 90 bp AGAGAGAGTGGCATATTTTCTGTGGTTGAGTCAGAATCCTGGGTTTaGGGCTTTGGCTTTCGGCATGGCTTCGCTTTTGTGGCAAGAGCA +
Preference number: 5 (lower is better)
Translates to: RESGIFSVVESESWV*GFGFRHGFAFVARA
Trigger: TGCTCTTGCCACAAAAGCGAAGCCATGCCGAAAGCCAAAGCCCCAAACCCAGGATTCTGACTCAACCACAGAAAATATGCCACTCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CCA 90 bp GGTATGTTCTTCTCCACGAGTGAACATTTGCATGCCGCCGGAGGCTaGACAAAGTCACATAACTACGTTTGCACACGATGCAGCTGTAGA +
Preference number: 5 (lower is better)
Translates to: GMFFSTSEHLHAAGG*TKSHNYVCTRCSCR
Trigger: TCTACAGCTGCATCGTGTGCAAACGTAGTTATGTGACTTTGTCCAGCCTCCGGCGGCATGCAAATGTTCACTCGTGGAGAAGAACATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp TACCTGTGGGCTGCATTATCTCCAAGGATGTGTAAGATTGAGGAATTAGGCTTTTCCACGAGTGAACATTaGCATGCCGCCGGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: YLWAALSPRMCKIEELGFSTSEH*HAAGGW
Trigger: CCAGCCTCCGGCGGCATGCAAATGTTCACTCGTGGA...AAAGCCTAATTCCTCAATCTTACACATCCTTGGAGATAATGCAGCCCACAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp ATCCTGGGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTATTTTTCTCAGCTGTTaGGATTTCTTCTTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: ILGLEGQGVLSLPPILEVIFLSC*DFFLGL
Trigger: CAAACCCAAGAAGAAATCCAAACAGCTGAGAAAAAT...AACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCCCAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS GCA 90 bp GTTGCAGTAATGGCAAGGGTATGTTCTTCTCCACGAGTGAACATTTaGATGCCGCCGGAGGCTGGACAAAGTCACATAACTACGTTTGCA +
Preference number: 5 (lower is better)
Translates to: VAVMARVCSSPRVNI*MPPEAGQSHITTFA
Trigger: TGCAAACGTAGTTATGTGACTTTGTCCAGCCTCCGGCGGCATGCAAATGTTCACTCGTGGAGAAGAACATACCCTTGCCATTACTGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp TGGGAGATATCAGGATTATCTGACCCCTTAAGTCTGGGTAGGGTAGCCCCCAACTGCTTTTGGGTCTGCTaGCAGGTTTACTGGCTTTAT +
Preference number: 5 (lower is better)
Translates to: WEISGLSDPLSLGRVAPNCFWVC*QVYWLY
Trigger: ATAAAGCCAGTAAACCTGCAAGCAGACCCAAAAGCA...GTTGGGGGCTACCCTACCCAGACTTAAGGGGTCAGATAATCCTGATATCTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp GGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTTTAACATTTTATGTCATCCTTTaGTTCGCTGTCTTCGGAATC +
Preference number: 5 (lower is better)
Translates to: GLEGQGVLSLPPILEVLTFYVIL*FAVFGI
Trigger: GATTCCGAAGACAGCGAACAAAAGGATGACATAAAA...TGTTAAAACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS GCA 90 bp AGATTTCATGTCGCGTCCTGTACTCAGCCAGCGCAAAGACCTTGTTaGAGTAATGGCAAGGGTATGTTCTTCTCCACGAGTGAACATTTG +
Preference number: 5 (lower is better)
Translates to: RFHVASCTQPAQRPC*SNGKGMFFSTSEHL
Trigger: CAAATGTTCACTCGTGGAGAAGAACATACCCTTGCCATTACTGCAACAAGGTCTTTGCGCTGGCTGAGTACAGGACGCGACATGAAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS GCA 90 bp TCCAAGAGATCCGCGTTCTCGTGGCACGTGTCGCCTGTTTCCTCTTaGTTAGGTAAGGTCTTGTATAAGTGTTTCTTTTGGTGCATTCTG +
Preference number: 5 (lower is better)
Translates to: SKRSAFSWHVSPVSS*LGKVLYKCFFWCIL
Trigger: CAGAATGCACCAAAAGAAACACTTATACAAGACCTTACCTAAGCAAGAGGAAACAGGCGACACGTGCCACGAGAACGCGGATCTCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093798.9
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp TGGATGCTTCTGAGTCCTGTCTGTAAGGGACAGAGCCCTGTCCTTCCATATTCTGAATCAGACACCTTTTaGAAGCTTGCTCTCAAGTCC +
Preference number: 5 (lower is better)
Translates to: WMLLSPVCKGQSPVLPYSESDTF*KLALKS
Trigger: GGACTTGAGAGCAAGCTTCAAAAAGGTGTCTGATTC...AGAATATGGAAGGACAGGGCTCTGTCCCTTACAGACAGGACTCAGAAGCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp GGGCTGGAAGGGCAGGGTGTGCTCTCCCTCCCTCCTATTCTGGAAGTTTTAACAGATCAGCAATATATTTaGCCTCCTCTGTTATTTCTC +
Preference number: 5 (lower is better)
Translates to: GLEGQGVLSLPPILEVLTDQQYI*PPLLFL
Trigger: GAGAAATAACAGAGGAGGCAAAATATATTGCTGATC...TGTTAAAACTTCCAGAATAGGAGGGAGGGAGAGCACACCCTGCCCTTCCAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp GGACAGAGCCCTGTCCTTCCATATTCTATCTCCCCAACCCTCAGAAACAGTGCTTGTCTCTTCCTGCATTaGATACTTAGGTTTTCTCCC +
Preference number: 5 (lower is better)
Translates to: GQSPVLPYSISPTLRNSACLFLH*ILRFSP
Trigger: GGGAGAAAACCTAAGTATCAAATGCAGGAAGAGACA...AGCACTGTTTCTGAGGGTTGGGGAGATAGAATATGGAAGGACAGGGCTCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS CCA 90 bp AGGTACCGGGCAGAGCAGGTTTTGCGATATAAGTTTCAATCTTACTaGTTTCTTCAGCGTTTGTGGTTTTGCCTGAAGACCCTCCGTGAT +
Preference number: 5 (lower is better)
Translates to: RYRAEQVLRYKFQSY*FLQRLWFCLKTLRD
Trigger: ATCACGGAGGGTCTTCAGGCAAAACCACAAACGCTGAAGAAACCAGTAAGATTGAAACTTATATCGCAAAACCTGCTCTGCCCGGTACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CCA 90 bp TCTTCTTGGGTTTGTAGTTGTAGTATGGGCGCCACGGCTTATCAGTaGAGTCCTGGTCACTCACTTCATCAAATGCTTCACTCATCTCTA +
Preference number: 5 (lower is better)
Translates to: SSWVCSCSMGATAYQ*SPGHSLHQMLHSSL
Trigger: TAGAGATGAGTGAAGCATTTGATGAAGTGAGTGACCAGGACTCCACTGATAAGCCGTGGCGCCCATACTACAACTACAAACCCAAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CCA 90 bp TTTTCTCAGCTGTTTGGATTTCTTCTTGGGTTTGTAGTTGTAGTATaGGCGCCACGGCTTATCAGTGGAGTCCTGGTCACTCACTTCATC +
Preference number: 5 (lower is better)
Translates to: FSQLFGFLLGFVVVV*APRLISGVLVTHFI
Trigger: GATGAAGTGAGTGACCAGGACTCCACTGATAAGCCGTGGCGCCCATACTACAACTACAAACCCAAGAAGAAATCCAAACAGCTGAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093798.9
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp TGGATGCTTCTGAGTCCTGTCTGTAAGGGACAGAGCCCTGTCCTTCCATATTCTGCATATTTTCTGTGGTaGAGTCAGAATCCTGGGTTT +
Preference number: 5 (lower is better)
Translates to: WMLLSPVCKGQSPVLPYSAYFLW*SQNPGF
Trigger: AAACCCAGGATTCTGACTCAACCACAGAAAATATGC...AGAATATGGAAGGACAGGGCTCTGTCCCTTACAGACAGGACTCAGAAGCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp TTTTGCCTACCCCAAACCACACTAAGCCTTCTTCATGGAGACAACACAACATTTCTGTGGGCTTCTTTCTaGATTCACCTCTGGGCAGGT +
Preference number: 5 (lower is better)
Translates to: FCLPQTTLSLLHGDNTTFLWASF*IHLWAG
Trigger: ACCTGCCCAGAGGTGAATCAAGAAAGAAGCCCACAG...AAATGTTGTGTTGTCTCCATGAAGAAGGCTTAGTGTGGTTTGGGGTAGGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp TGTCCACTGTTTACACTTCAGTTCTACTTGGTCTTTACGTACTCGATGCAAACTGACTTGTGGTTGCTGTaGGTCAGGCTAGCGATGGTG +
Preference number: 5 (lower is better)
Translates to: CPLFTLQFYLVFTYSMQTDLWLL*VRLAMV
Trigger: CACCATCGCTAGCCTGACCAACAGCAACCACAAGTC...AGTTTGCATCGAGTACGTAAAGACCAAGTAGAACTGAAGTGTAAACAGTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp AACATTTGGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTCATCTTGAGCGTCTCGTaGAGTGTGAATGCCTTGTTA +
Preference number: 5 (lower is better)
Translates to: NIWCEKQESSDNLPALAFILSVS*SVNALL
Trigger: TAACAAGGCATTCACACTCAACGAGACGCTCAAGAT...GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp AACATTTGGTGCGAGAAACAGGAGTCCTCTGATAACCTTCCAGCCTTGGCTTTCTTCTCCTTAATGCTTTaGGGTCTGCTTGCAGGTTTA +
Preference number: 5 (lower is better)
Translates to: NIWCEKQESSDNLPALAFFSLML*GLLAGL
Trigger: TAAACCTGCAAGCAGACCCAAAAGCATTAAGGAGAA...GAAAGCCAAGGCTGGAAGGTTATCAGAGGACTCCTGTTTCTCGCACCAAATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp TACCTGTGGGCTGCATTATCTCCAAGGATGTGTAAGATTGAGGAATTAGGCTTTCAAAGGGGTGCAACATaGCTATTTGTGGAGGTACCG +
Preference number: 5 (lower is better)
Translates to: YLWAALSPRMCKIEELGFQRGAT*LFVEVP
Trigger: CGGTACCTCCACAAATAGCAATGTTGCACCCCTTTG...AAAGCCTAATTCCTCAATCTTACACATCCTTGGAGATAATGCAGCCCACAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp TACCTGTGGGCTGCATTATCTCCAAGGATGTGTAAGATTGAGGAATTAGGCTTTCGCTCGTGGTTCCGTTaGGTGGAGAGATACAAGAAA +
Preference number: 5 (lower is better)
Translates to: YLWAALSPRMCKIEELGFRSWFR*VERYKK
Trigger: TTTCTTGTATCTCTCCACCAAACGGAACCACGAGCG...AAAGCCTAATTCCTCAATCTTACACATCCTTGGAGATAATGCAGCCCACAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS GCA 90 bp TCCTTGAGCACTTACATAGGAAGAATTCCGGTAGCTCTTATAAGGTaGCCTCTTGCATCTCATAGGCAAGAGCCTGTAAAGTTTGTATGG +
Preference number: 5 (lower is better)
Translates to: SLSTYIGRIPVALIR*PLASHRQEPVKFVW
Trigger: CCATACAAACTTTACAGGCTCTTGCCTATGAGATGCAAGAGGGCACCTTATAAGAGCTACCGGAATTCTTCCTATGTAAGTGCTCAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp TACCTGTGGGCTGCATTATCTCCAAGGATGTGTAAGATTGAGGAATTAGGCTTTCTGTGGGCTTTAAACTaGGTGTCTTCCACGATGATG +
Preference number: 5 (lower is better)
Translates to: YLWAALSPRMCKIEELGFLWALN*VSSTMM
Trigger: CATCATCGTGGAAGACACCAAGTTTAAAGCCCACAG...AAAGCCTAATTCCTCAATCTTACACATCCTTGGAGATAATGCAGCCCACAGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp TACCTGTGGGCTGCATTATCTCCAAGGATGTGTAAGATTGAGGAATTAGGCTTTAGCTCACACTGCAGCTaGGGCATCTCTTTATTCTCT +
Preference number: 5 (lower is better)
Translates to: YLWAALSPRMCKIEELGFSSHCS*GISLFS
Trigger: AGAGAATAAAGAGATGCCCAAGCTGCAGTGTGAGCT...AAAGCCTAATTCCTCAATCTTACACATCCTTGGAGATAATGCAGCCCACAGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS TCA 90 bp AATGCAGATCGTATGGCTCCAAAAGATGTTTTTGAAATAAAGACTTaGGGCGGCCAGGACATTGCTGTGGGCTTTAAACTTGGTGTCTTC +
Preference number: 5 (lower is better)
Translates to: NADRMAPKDVFEIKT*GGQDIAVGFKLGVF
Trigger: GAAGACACCAAGTTTAAAGCCCACAGCAATGTCCTGGCCGCCTCAAGTCTTTATTTCAAAAACATCTTTTGGAGCCATACGATCTGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000128269.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp TACCTGTGGGCTGCATTATCTCCAAGGATGTGTAAGATTGAGGAATTAGGCTTTCGGGCAGAGCAGGTTTaGCGATATAAGTTTCAATCT +
Preference number: 5 (lower is better)
Translates to: YLWAALSPRMCKIEELGFRAEQV*RYKFQS
Trigger: AGATTGAAACTTATATCGCAAAACCTGCTCTGCCCG...AAAGCCTAATTCCTCAATCTTACACATCCTTGGAGATAATGCAGCCCACAGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp TGTCCACTGTTTACACTTCAGTTCTACTTGGTCTTTACGTACTCGATGCAAACTGCTGTTTTGCATATTTaGGGGCACTGGAAGCAAGCA +
Preference number: 5 (lower is better)
Translates to: CPLFTLQFYLVFTYSMQTAVLHI*GHWKQA
Trigger: TGCTTGCTTCCAGTGCCCCAAAATATGCAAAACAGC...AGTTTGCATCGAGTACGTAAAGACCAAGTAGAACTGAAGTGTAAACAGTGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp TACCTGTGGGCTGCATTATCTCCAAGGATGTGTAAGATTGAGGAATTAGGCTTTAAACTGACACCTCAGTaGAATCGAAGTTATCGACGA +
Preference number: 5 (lower is better)
Translates to: YLWAALSPRMCKIEELGFKLTPQ*NRSYRR
Trigger: TCGTCGATAACTTCGATTCAACTGAGGTGTCAGTTT...AAAGCCTAATTCCTCAATCTTACACATCCTTGGAGATAATGCAGCCCACAGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS-3UTR CAA 90 bp TTTTGCCTACCCCAAACCACACTAAGCCTTCTTCATGGAGACAACACAACATTTCGTTCCTTCCTCCATTaGACTTTCCTCATTTTTCTC +
Preference number: 5 (lower is better)
Translates to: FCLPQTTLSLLHGDNTTFRSFLH*TFLIFL
Trigger: GAGAAAAATGAGGAAAGTCAAATGGAGGAAGGAACG...AAATGTTGTGTTGTCTCCATGAAGAAGGCTTAGTGTGGTTTGGGGTAGGCAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000152594.8
CDS TCA 90 bp ATTTCTGTAAACACTTCGGCTTTCAGATCATCCAGCTCCAAGACGTaGCTGGAAATGCAGATCGTATGGCTCCAAAAGATGTTTTTGAAA +
Preference number: 5 (lower is better)
Translates to: ISVNTSAFRSSSSKT*LEMQIVWLQKMFLK
Trigger: TTTCAAAAACATCTTTTGGAGCCATACGATCTGCATTTCCAGTCACGTCTTGGAGCTGGATGATCTGAAAGCCGAAGTGTTTACAGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000128269.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS GCA 72 bp GTTTCACCTCTGCACGATCCAGTTCGGCTGGGTATCTaGACCGGCCGACGGGGCTTCTGCTCCTGCGTTCCT +
Preference number: 6 (lower is better)
Translates to: VSPLHDPVRLGI*TGRRGFCSCVP
Trigger: AGGAACGCAGGAGCAGAAGCCCCGTCGGCCGGTGCAGATACCCAGCCGAACTGGATCGTGCAGAGGTGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093798.9
ENSMUST00000152594.8
CDS TCA 72 bp CCTGTTCCCTCGGAGGCTGACTCCTGTAGGCCTCAGTaGTGGACGAGACGGCATACGAGTGCTCAGCAAGCG +
Preference number: 6 (lower is better)
Translates to: PVPSEADSCRPQ*WTRRHTSAQQA
Trigger: CGCTTGCTGAGCACTCGTATGCCGTCTCGTCCATCACTGAGGCCTACAGGAGTCAGCCTCCGAGGGAACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS GCA 72 bp CCTGGGATGGGCACGTGGCTAGACCTCATGCAGATCTaGTCGTGCCGGTCCAGTCTGTTGAGGGTGGTGAAC +
Preference number: 6 (lower is better)
Translates to: PGMGTWLDLMQI*SCRSSLLRVVN
Trigger: GTTCACCACCCTCAACAGACTGGACCGGCACGAGCAGATCTGCATGAGGTCTAGCCACGTGCCCATCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CCA 72 bp TCCAAGAACGGTGGGTTTCCTCCTGGGATGGGCACGTaGCTAGACCTCATGCAGATCTGCTCGTGCCGGTCC +
Preference number: 6 (lower is better)
Translates to: SKNGGFPPGMGT*LDLMQICSCRS
Trigger: GGACCGGCACGAGCAGATCTGCATGAGGTCTAGCCACGTGCCCATCCCAGGAGGAAACCCACCGTTCTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS TCA 72 bp GCTCCTGGGTCGGCTTGTGGAGCTGCATGTGGGCACTaGGCAGCGTGCTGCTGTCAAAGGACTTGGAACAAC +
Preference number: 6 (lower is better)
Translates to: APGSACGAACGH*AACCCQRTWNN
Trigger: GTTGTTCCAAGTCCTTTGACAGCAGCACGCTGCTCAGTGCCCACATGCAGCTCCACAAGCCGACCCAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS GCA 72 bp CCACTGGCACGGCAGGGCTGCTGGGCAACGTGTTTCTaGCATCTTGGAAGTCCAGTGTGGGCATTTCAGAGC +
Preference number: 6 (lower is better)
Translates to: PLARQGCWATCF*HLGSPVWAFQS
Trigger: GCTCTGAAATGCCCACACTGGACTTCCAAGATGGCAGAAACACGTTGCCCAGCAGCCCTGCCGTGCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS GCA 72 bp CCTGCCGTGAAGGTGTTTCCACTGGCACGGCAGGGCTaGTGGGCAACGTGTTTCTGCCATCTTGGAAGTCCA +
Preference number: 6 (lower is better)
Translates to: PAVKVFPLARQG*WATCFCHLGSP
Trigger: TGGACTTCCAAGATGGCAGAAACACGTTGCCCAGCAGCCCTGCCGTGCCAGTGGAAACACCTTCACGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS GCA 72 bp CAGATGAACTCCTTCACGCCCAGGTGTATGCGCTCGTaGTTCTGTAGGTTCCCCTGCACCGAGAAGCACCGC +
Preference number: 6 (lower is better)
Translates to: QMNSFTPRCMRS*FCRFPCTEKHR
Trigger: GCGGTGCTTCTCGGTGCAGGGGAACCTACAGAAGCACGAGCGCATACACCTGGGCGTGAAGGAGTTCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093798.9
ENSMUST00000152594.8
CDS CCA 72 bp CAGTACTTGCACACAAAAGGCTCCTGGGTCGGCTTGTaGAGCTGCATGTGGGCACTGAGCAGCGTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: QYLHTKGSWVGL*SCMWALSSVLL
Trigger: CAGCAGCACGCTGCTCAGTGCCCACATGCAGCTCCACAAGCCGACCCAGGAGCCTTTTGTGTGCAAGTACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CCA 72 bp GCCGTGAAGGTGTTTCCACTGGCACGGCAGGGCTGCTaGGCAACGTGTTTCTGCCATCTTGGAAGTCCAGTG +
Preference number: 6 (lower is better)
Translates to: AVKVFPLARQGC*ATCFCHLGSPV
Trigger: CACTGGACTTCCAAGATGGCAGAAACACGTTGCCCAGCAGCCCTGCCGTGCCAGTGGAAACACCTTCACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CAA 90 bp AGGGACGGGCTGACCACCGGTTGTGAAGGGGACTTGTGGTTGCTGTaGGTCAGGCTAGCGATGGTGTTGCTGTGCTTGATCACCGACGAG +
Preference number: 6 (lower is better)
Translates to: RDGLTTGCEGDLWLL*VRLAMVLLCLITDE
Trigger: CTCGTCGGTGATCAAGCACAGCAACACCATCGCTAGCCTGACCAACAGCAACCACAAGTCCCCTTCACAACCGGTGGTCAGCCCGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS GCA 72 bp ACAGCTGCAGTTATAAACGAGGGGCGGGACCTCTGCTaGTCCTGGACCCGGAGCATCAGAGGGCTGATTTTC +
Preference number: 6 (lower is better)
Translates to: TAAVINEGRDLC*SWTRSIRGLIF
Trigger: GAAAATCAGCCCTCTGATGCTCCGGGTCCAGGAGCAGCAGAGGTCCCGCCCCTCGTTTATAACTGCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS GCA 72 bp ATGGGCACGTGGCTAGACCTCATGCAGATCTGCTCGTaGCGGTCCAGTCTGTTGAGGGTGGTGAACTGCTTG +
Preference number: 6 (lower is better)
Translates to: MGTWLDLMQICS*RSSLLRVVNCL
Trigger: CAAGCAGTTCACCACCCTCAACAGACTGGACCGGCACGAGCAGATCTGCATGAGGTCTAGCCACGTGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS GCA 72 bp TTCTTCGAAGGCCTTATCTGGGGGCAGTTTCACCTCTaGACGATCCAGTTCGGCTGGGTATCTGCACCGGCC +
Preference number: 6 (lower is better)
Translates to: FFEGLIWGQFHL*TIQFGWVSAPA
Trigger: GGCCGGTGCAGATACCCAGCCGAACTGGATCGTGCAGAGGTGAAACTGCCCCCAGATAAGGCCTTCGAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093798.9
ENSMUST00000152594.8
CDS CCA 72 bp ACAAAAGGCTCCTGGGTCGGCTTGTGGAGCTGCATGTaGGCACTGAGCAGCGTGCTGCTGTCAAAGGACTTG +
Preference number: 6 (lower is better)
Translates to: TKGSWVGLWSCM*ALSSVLLSKDL
Trigger: CAAGTCCTTTGACAGCAGCACGCTGCTCAGTGCCCACATGCAGCTCCACAAGCCGACCCAGGAGCCTTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CAA 90 bp TGCCGGTCCAGTCTGTTGAGGGTGGTGAACTGCTTGTTGCAGTACTaGCACACAAAAGGCTCCTGGGTCGGCTTGTGGAGCTGCATGTGG +
Preference number: 6 (lower is better)
Translates to: CRSSLLRVVNCLLQY*HTKGSWVGLWSCMW
Trigger: CCACATGCAGCTCCACAAGCCGACCCAGGAGCCTTTTGTGTGCAAGTACTGCAACAAGCAGTTCACCACCCTCAACAGACTGGACCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CAA 90 bp CAGATCTGCTCGTGCCGGTCCAGTCTGTTGAGGGTGGTGAACTGCTaGTTGCAGTACTTGCACACAAAAGGCTCCTGGGTCGGCTTGTGG +
Preference number: 6 (lower is better)
Translates to: QICSCRSSLLRVVNC*LQYLHTKGSWVGLW
Trigger: CCACAAGCCGACCCAGGAGCCTTTTGTGTGCAAGTACTGCAACAAGCAGTTCACCACCCTCAACAGACTGGACCGGCACGAGCAGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CAA 90 bp GACTTGTGGTTGCTGTTGGTCAGGCTAGCGATGGTGTTGCTGTGCTaGATCACCGACGAGAACTGGCTGCTGTGCACAATGACGGAGGGC +
Preference number: 6 (lower is better)
Translates to: DLWLLLVRLAMVLLC*ITDENWLLCTMTEG
Trigger: GCCCTCCGTCATTGTGCACAGCAGCCAGTTCTCGTCGGTGATCAAGCACAGCAACACCATCGCTAGCCTGACCAACAGCAACCACAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CCA 72 bp CCATGTGGTCCGCGTCTGACAAGGCACTCCCCGCGCTaGATAGTTCGCCAATCCTATTTTCTGGCCCTAATG +
Preference number: 6 (lower is better)
Translates to: PCGPRLTRHSPR*IVRQSYFLALM
Trigger: CATTAGGGCCAGAAAATAGGATTGGCGAACTATCCAGCGCGGGGAGTGCCTTGTCAGACGCGGACCACATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CAA 72 bp CACGGCAGGGCTGCTGGGCAACGTGTTTCTGCCATCTaGGAAGTCCAGTGTGGGCATTTCAGAGCTTTGCAG +
Preference number: 6 (lower is better)
Translates to: HGRAAGQRVSAI*EVQCGHFRALQ
Trigger: CTGCAAAGCTCTGAAATGCCCACACTGGACTTCCAAGATGGCAGAAACACGTTGCCCAGCAGCCCTGCCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CAA 90 bp AACTGCTTGTTGCAGTACTTGCACACAAAAGGCTCCTGGGTCGGCTaGTGGAGCTGCATGTGGGCACTGAGCAGCGTGCTGCTGTCAAAG +
Preference number: 6 (lower is better)
Translates to: NCLLQYLHTKGSWVG*WSCMWALSSVLLSK
Trigger: CTTTGACAGCAGCACGCTGCTCAGTGCCCACATGCAGCTCCACAAGCCGACCCAGGAGCCTTTTGTGTGCAAGTACTGCAACAAGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CAA 90 bp TTCCACTGGCACGGCAGGGCTGCTGGGCAACGTGTTTCTGCCATCTaGGAAGTCCAGTGTGGGCATTTCAGAGCTTTGCAGATTCGGAAC +
Preference number: 6 (lower is better)
Translates to: FHWHGRAAGQRVSAI*EVQCGHFRALQIRN
Trigger: GTTCCGAATCTGCAAAGCTCTGAAATGCCCACACTGGACTTCCAAGATGGCAGAAACACGTTGCCCAGCAGCCCTGCCGTGCCAGTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CAA 90 bp CTTTTGGGTCTGCTTGCAGGTTTACTGGCTTTATCTGTCTCGGGCTaGCTGTCCTTGATCAGGGACGGGCTGACCACCGGTTGTGAAGGG +
Preference number: 6 (lower is better)
Translates to: LLGLLAGLLALSVSG*LSLIRDGLTTGCEG
Trigger: CCCTTCACAACCGGTGGTCAGCCCGTCCCTGATCAAGGACAGCAAGCCCGAGACAGATAAAGCCAGTAAACCTGCAAGCAGACCCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS GCA 72 bp TGCTCGTGCCGGTCCAGTCTGTTGAGGGTGGTGAACTaGTTGTTGCAGTACTTGCACACAAAAGGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: CSCRSSLLRVVN*LLQYLHTKGSW
Trigger: CCAGGAGCCTTTTGTGTGCAAGTACTGCAACAAGCAGTTCACCACCCTCAACAGACTGGACCGGCACGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS GCA 72 bp GCCGCCGGAGGCTGGACAAAGTCACATAACTACGTTTaGACACGATGCAGCTGTAGAGCATCTGCCCGTTCA +
Preference number: 6 (lower is better)
Translates to: AAGGWTKSHNYV*TRCSCRASARS
Trigger: TGAACGGGCAGATGCTCTACAGCTGCATCGTGTGCAAACGTAGTTATGTGACTTTGTCCAGCCTCCGGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS GCA 72 bp TGGTTGCTGTTGGTCAGGCTAGCGATGGTGTTGCTGTaGTTGATCACCGACGAGAACTGGCTGCTGTGCACA +
Preference number: 6 (lower is better)
Translates to: WLLLVRLAMVLL*LITDENWLLCT
Trigger: TGTGCACAGCAGCCAGTTCTCGTCGGTGATCAAGCACAGCAACACCATCGCTAGCCTGACCAACAGCAACCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CCA 72 bp AACTGCTTGTTGCAGTACTTGCACACAAAAGGCTCCTaGGTCGGCTTGTGGAGCTGCATGTGGGCACTGAGC +
Preference number: 6 (lower is better)
Translates to: NCLLQYLHTKGS*VGLWSCMWALS
Trigger: GCTCAGTGCCCACATGCAGCTCCACAAGCCGACCCAGGAGCCTTTTGTGTGCAAGTACTGCAACAAGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CCA 72 bp AGTGGGGTAGTTTTCCAAGAACGGTGGGTTTCCTCCTaGGATGGGCACGTGGCTAGACCTCATGCAGATCTG +
Preference number: 6 (lower is better)
Translates to: SGVVFQERWVSS*DGHVARPHADL
Trigger: CAGATCTGCATGAGGTCTAGCCACGTGCCCATCCCAGGAGGAAACCCACCGTTCTTGGAAAACTACCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CCA 72 bp ACGGCAGGGCTGCTGGGCAACGTGTTTCTGCCATCTTaGAAGTCCAGTGTGGGCATTTCAGAGCTTTGCAGA +
Preference number: 6 (lower is better)
Translates to: TAGLLGNVFLPS*KSSVGISELCR
Trigger: TCTGCAAAGCTCTGAAATGCCCACACTGGACTTCCAAGATGGCAGAAACACGTTGCCCAGCAGCCCTGCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CAA 72 bp TCGTGCCGGTCCAGTCTGTTGAGGGTGGTGAACTGCTaGTTGCAGTACTTGCACACAAAAGGCTCCTGGGTC +
Preference number: 6 (lower is better)
Translates to: SCRSSLLRVVNC*LQYLHTKGSWV
Trigger: GACCCAGGAGCCTTTTGTGTGCAAGTACTGCAACAAGCAGTTCACCACCCTCAACAGACTGGACCGGCACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CAA 72 bp GACTTGTGGTTGCTGTTGGTCAGGCTAGCGATGGTGTaGCTGTGCTTGATCACCGACGAGAACTGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: DLWLLLVRLAMV*LCLITDENWLL
Trigger: CAGCAGCCAGTTCTCGTCGGTGATCAAGCACAGCAACACCATCGCTAGCCTGACCAACAGCAACCACAAGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CAA 72 bp CTGACCACCGGTTGTGAAGGGGACTTGTGGTTGCTGTaGGTCAGGCTAGCGATGGTGTTGCTGTGCTTGATC +
Preference number: 6 (lower is better)
Translates to: LTTGCEGDLWLL*VRLAMVLLCLI
Trigger: GATCAAGCACAGCAACACCATCGCTAGCCTGACCAACAGCAACCACAAGTCCCCTTCACAACCGGTGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CAA 90 bp TGTGAAGGGGACTTGTGGTTGCTGTTGGTCAGGCTAGCGATGGTGTaGCTGTGCTTGATCACCGACGAGAACTGGCTGCTGTGCACAATG +
Preference number: 6 (lower is better)
Translates to: CEGDLWLLLVRLAMV*LCLITDENWLLCTM
Trigger: CATTGTGCACAGCAGCCAGTTCTCGTCGGTGATCAAGCACAGCAACACCATCGCTAGCCTGACCAACAGCAACCACAAGTCCCCTTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS TCA 72 bp ATGAAACACATGCGGGCTCTGTCTGTAGGGTGGCGCTaGCGGTGTTTCCAGTGGAAGAAACTGACACCTCAG +
Preference number: 6 (lower is better)
Translates to: MKHMRALSVGWR*RCFQWKKLTPQ
Trigger: CTGAGGTGTCAGTTTCTTCCACTGGAAACACCGTCAGCGCCACCCTACAGACAGAGCCCGCATGTGTTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CCA 72 bp CATGCTCCCGGATGTGCCTCCGCTCGTGGTTCCGTTTaGTGGAGAGATACAAGAAACCCTGAAAGCAGAACT +
Preference number: 6 (lower is better)
Translates to: HAPGCASARGSV*WRDTRNPESRT
Trigger: AGTTCTGCTTTCAGGGTTTCTTGTATCTCTCCACCAAACGGAACCACGAGCGGAGGCACATCCGGGAGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093798.9
ENSMUST00000152594.8
CDS CAA 72 bp AGTCTGTTGAGGGTGGTGAACTGCTTGTTGCAGTACTaGCACACAAAAGGCTCCTGGGTCGGCTTGTGGAGC +
Preference number: 6 (lower is better)
Translates to: SLLRVVNCLLQY*HTKGSWVGLWS
Trigger: GCTCCACAAGCCGACCCAGGAGCCTTTTGTGTGCAAGTACTGCAACAAGCAGTTCACCACCCTCAACAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CAA 72 bp TTGCTGTTGGTCAGGCTAGCGATGGTGTTGCTGTGCTaGATCACCGACGAGAACTGGCTGCTGTGCACAATG +
Preference number: 6 (lower is better)
Translates to: LLLVRLAMVLLC*ITDENWLLCTM
Trigger: CATTGTGCACAGCAGCCAGTTCTCGTCGGTGATCAAGCACAGCAACACCATCGCTAGCCTGACCAACAGCAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS GCA 72 bp GTCGCGTCCTGTACTCAGCCAGCGCAAAGACCTTGTTaGAGTAATGGCAAGGGTATGTTCTTCTCCACGAGT +
Preference number: 6 (lower is better)
Translates to: VASCTQPAQRPC*SNGKGMFFSTS
Trigger: ACTCGTGGAGAAGAACATACCCTTGCCATTACTGCAACAAGGTCTTTGCGCTGGCTGAGTACAGGACGCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS GCA 72 bp GTGCATCTTGAGTGTGGAGGAGCTCTGGAACTGCTTTaGACAGAGCTCGCAGATGTAAGGCTTCGAAGTGAG +
Preference number: 6 (lower is better)
Translates to: VHLECGGALELL*TELADVRLRSE
Trigger: CTCACTTCGAAGCCTTACATCTGCGAGCTCTGTGCAAAGCAGTTCCAGAGCTCCTCCACACTCAAGATGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093798.9
ENSMUST00000152594.8
CDS CCA 72 bp GTCAGAATCCTGGGTTTGGGGCTTTGGCTTTCGGCATaGCTTCGCTTTTGTGGCAAGAGCATCACCAGTTTC +
Preference number: 6 (lower is better)
Translates to: VRILGLGLWLSA*LRFCGKSITSF
Trigger: GAAACTGGTGATGCTCTTGCCACAAAAGCGAAGCCATGCCGAAAGCCAAAGCCCCAAACCCAGGATTCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CAA 90 bp CGTGTTTCTGCCATCTTGGAAGTCCAGTGTGGGCATTTCAGAGCTTaGCAGATTCGGAACGATGAACGTATCAGGGGCAGATTCACCCCT +
Preference number: 6 (lower is better)
Translates to: RVSAILEVQCGHFRA*QIRNDERIRGRFTP
Trigger: AGGGGTGAATCTGCCCCTGATACGTTCATCGTTCCGAATCTGCAAAGCTCTGAAATGCCCACACTGGACTTCCAAGATGGCAGAAACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CAA 90 bp CCTGCTGCCCCATCAGGGCAGCCATCACAGAGCTCACACTGCAGCTaGGGCATCTCTTTATTCTCTTCTTCTTCTTCTTCTTCTTCGAAG +
Preference number: 6 (lower is better)
Translates to: PAAPSGQPSQSSHCS*GISLFSSSSSSSSK
Trigger: CTTCGAAGAAGAAGAAGAAGAAGAAGAGAATAAAGAGATGCCCAAGCTGCAGTGTGAGCTCTGTGATGGCTGCCCTGATGGGGCAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093798.9
ENSMUST00000152594.8
CDS TCA 72 bp CGCTGCTCATTTAAGATGGAGAGTACTGTGTCACTGTaGAAGTCGTCCTTGAGGTCCCTGGAGAGGGACATG +
Preference number: 6 (lower is better)
Translates to: RCSFKMESTVSL*KSSLRSLERDM
Trigger: CATGTCCCTCTCCAGGGACCTCAAGGACGACTTTCACAGTGACACAGTACTCTCCATCTTAAATGAGCAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000128269.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CCA 72 bp TTCTCCACGAGTGAACATTTGCATGCCGCCGGAGGCTaGACAAAGTCACATAACTACGTTTGCACACGATGC +
Preference number: 6 (lower is better)
Translates to: FSTSEHLHAAGG*TKSHNYVCTRC
Trigger: GCATCGTGTGCAAACGTAGTTATGTGACTTTGTCCAGCCTCCGGCGGCATGCAAATGTTCACTCGTGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CAA 72 bp GCCATCTTGGAAGTCCAGTGTGGGCATTTCAGAGCTTaGCAGATTCGGAACGATGAACGTATCAGGGGCAGA +
Preference number: 6 (lower is better)
Translates to: AILEVQCGHFRA*QIRNDERIRGR
Trigger: TCTGCCCCTGATACGTTCATCGTTCCGAATCTGCAAAGCTCTGAAATGCCCACACTGGACTTCCAAGATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS TCA 72 bp AAGAGCATCACCAGTTTCTTTTCCTGTTTTAGCAGATaGGCTGCTGTCCTGTTCCCTCGGAGGCTGACTCCT +
Preference number: 6 (lower is better)
Translates to: KSITSFFSCFSR*AAVLFPRRLTP
Trigger: AGGAGTCAGCCTCCGAGGGAACAGGACAGCAGCTCATCTGCTAAAACAGGAAAAGAAACTGGTGATGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS TCA 72 bp AGCGTCTCGTTGAGTGTGAATGCCTTGTTACAATACTaGCAGATGAACTCCTTCACGCCCAGGTGTATGCGC +
Preference number: 6 (lower is better)
Translates to: SVSLSVNALLQY*QMNSFTPRCMR
Trigger: GCGCATACACCTGGGCGTGAAGGAGTTCATCTGTCAGTATTGTAACAAGGCATTCACACTCAACGAGACGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093798.9
ENSMUST00000152594.8
CDS GCA 72 bp ATGGCAAGGGTATGTTCTTCTCCACGAGTGAACATTTaGATGCCGCCGGAGGCTGGACAAAGTCACATAACT +
Preference number: 6 (lower is better)
Translates to: MARVCSSPRVNI*MPPEAGQSHIT
Trigger: AGTTATGTGACTTTGTCCAGCCTCCGGCGGCATGCAAATGTTCACTCGTGGAGAAGAACATACCCTTGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS GCA 72 bp CCATCTTGGAAGTCCAGTGTGGGCATTTCAGAGCTTTaGAGATTCGGAACGATGAACGTATCAGGGGCAGAT +
Preference number: 6 (lower is better)
Translates to: PSWKSSVGISEL*RFGTMNVSGAD
Trigger: ATCTGCCCCTGATACGTTCATCGTTCCGAATCTGCAAAGCTCTGAAATGCCCACACTGGACTTCCAAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CCA 72 bp GGCATATTTTCTGTGGTTGAGTCAGAATCCTGGGTTTaGGGCTTTGGCTTTCGGCATGGCTTCGCTTTTGTG +
Preference number: 6 (lower is better)
Translates to: GIFSVVESESWV*GFGFRHGFAFV
Trigger: CACAAAAGCGAAGCCATGCCGAAAGCCAAAGCCCCAAACCCAGGATTCTGACTCAACCACAGAAAATATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CAA 72 bp CTTGAGGCGGCCAGGACATTGCTGTGGGCTTTAAACTaGGTGTCTTCCACGATGATGGTGACATCACATAAG +
Preference number: 6 (lower is better)
Translates to: LEAARTLLWALN*VSSTMMVTSHK
Trigger: CTTATGTGATGTCACCATCATCGTGGAAGACACCAAGTTTAAAGCCCACAGCAATGTCCTGGCCGCCTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000128269.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CAA 72 bp AATGGCAAGGGTATGTTCTTCTCCACGAGTGAACATTaGCATGCCGCCGGAGGCTGGACAAAGTCACATAAC +
Preference number: 6 (lower is better)
Translates to: NGKGMFFSTSEH*HAAGGWTKSHN
Trigger: GTTATGTGACTTTGTCCAGCCTCCGGCGGCATGCAAATGTTCACTCGTGGAGAAGAACATACCCTTGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CAA 90 bp TGTTGCAGTAATGGCAAGGGTATGTTCTTCTCCACGAGTGAACATTaGCATGCCGCCGGAGGCTGGACAAAGTCACATAACTACGTTTGC +
Preference number: 6 (lower is better)
Translates to: CCSNGKGMFFSTSEH*HAAGGWTKSHNYVC
Trigger: GCAAACGTAGTTATGTGACTTTGTCCAGCCTCCGGCGGCATGCAAATGTTCACTCGTGGAGAAGAACATACCCTTGCCATTACTGCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS GCA 72 bp TCCGCGTTCTCGTGGCACGTGTCGCCTGTTTCCTCTTaGTTAGGTAAGGTCTTGTATAAGTGTTTCTTTTGG +
Preference number: 6 (lower is better)
Translates to: SAFSWHVSPVSS*LGKVLYKCFFW
Trigger: CCAAAAGAAACACTTATACAAGACCTTACCTAAGCAAGAGGAAACAGGCGACACGTGCCACGAGAACGCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093798.9
ENSMUST00000152594.8
CDS CCA 72 bp CTGTTATCTGGCAAAGGGGTGCAACATTGCTATTTGTaGAGGTACCGGGCAGAGCAGGTTTTGCGATATAAG +
Preference number: 6 (lower is better)
Translates to: LLSGKGVQHCYL*RYRAEQVLRYK
Trigger: CTTATATCGCAAAACCTGCTCTGCCCGGTACCTCCACAAATAGCAATGTTGCACCCCTTTGCCAGATAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CCA 72 bp GTTTGTAGTTGTAGTATGGGCGCCACGGCTTATCAGTaGAGTCCTGGTCACTCACTTCATCAAATGCTTCAC +
Preference number: 6 (lower is better)
Translates to: VCSCSMGATAYQ*SPGHSLHQMLH
Trigger: GTGAAGCATTTGATGAAGTGAGTGACCAGGACTCCACTGATAAGCCGTGGCGCCCATACTACAACTACAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CAA 72 bp CGTATCAGGGGCAGATTCACCCCTTTGACTGCTTCCTaGAGCACTTACATAGGAAGAATTCCGGTAGCTCTT +
Preference number: 6 (lower is better)
Translates to: RIRGRFTPLTAS*STYIGRIPVAL
Trigger: AAGAGCTACCGGAATTCTTCCTATGTAAGTGCTCAAGGAAGCAGTCAAAGGGGTGAATCTGCCCCTGATACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CAA 72 bp CCATCAGGGCAGCCATCACAGAGCTCACACTGCAGCTaGGGCATCTCTTTATTCTCTTCTTCTTCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: PSGQPSQSSHCS*GISLFSSSSSS
Trigger: AGAAGAAGAAGAAGAAGAGAATAAAGAGATGCCCAAGCTGCAGTGTGAGCTCTGTGATGGCTGCCCTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093798.9
ENSMUST00000152594.8
CDS CAA 90 bp TTGCAGATTCGGAACGATGAACGTATCAGGGGCAGATTCACCCCTTaGACTGCTTCCTTGAGCACTTACATAGGAAGAATTCCGGTAGCT +
Preference number: 6 (lower is better)
Translates to: LQIRNDERIRGRFTP*TASLSTYIGRIPVA
Trigger: AGCTACCGGAATTCTTCCTATGTAAGTGCTCAAGGAAGCAGTCAAAGGGGTGAATCTGCCCCTGATACGTTCATCGTTCCGAATCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CAA 90 bp AACGATGAACGTATCAGGGGCAGATTCACCCCTTTGACTGCTTCCTaGAGCACTTACATAGGAAGAATTCCGGTAGCTCTTATAAGGTGC +
Preference number: 6 (lower is better)
Translates to: NDERIRGRFTPLTAS*STYIGRIPVALIRC
Trigger: GCACCTTATAAGAGCTACCGGAATTCTTCCTATGTAAGTGCTCAAGGAAGCAGTCAAAGGGGTGAATCTGCCCCTGATACGTTCATCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CAA 90 bp GGGGTGCAACATTGCTATTTGTGGAGGTACCGGGCAGAGCAGGTTTaGCGATATAAGTTTCAATCTTACTGGTTTCTTCAGCGTTTGTGG +
Preference number: 6 (lower is better)
Translates to: GVQHCYLWRYRAEQV*RYKFQSYWFLQRLW
Trigger: CCACAAACGCTGAAGAAACCAGTAAGATTGAAACTTATATCGCAAAACCTGCTCTGCCCGGTACCTCCACAAATAGCAATGTTGCACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS TCA 72 bp AACACTTCGGCTTTCAGATCATCCAGCTCCAAGACGTaGCTGGAAATGCAGATCGTATGGCTCCAAAAGATG +
Preference number: 6 (lower is better)
Translates to: NTSAFRSSSSKT*LEMQIVWLQKM
Trigger: CATCTTTTGGAGCCATACGATCTGCATTTCCAGTCACGTCTTGGAGCTGGATGATCTGAAAGCCGAAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000128269.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CCA 72 bp TTCCGTCTCAATGATGGAAAACGCGTTTGTGATCCTTaGCCCATTAGTGACAGCTGGTTCTTCGTGCCTTTT +
Preference number: 6 (lower is better)
Translates to: FRLNDGKRVCDP*PISDSWFFVPF
Trigger: AAAAGGCACGAAGAACCAGCTGTCACTAATGGGCCAAGGATCACAAACGCGTTTTCCATCATTGAGACGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000128269.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CCA 72 bp CTTGCATCTCATAGGCAAGAGCCTGTAAAGTTTGTATaGATAGACAGTAGGCTTCAAGCCTCCGTTCGCTGT +
Preference number: 6 (lower is better)
Translates to: LASHRQEPVKFV*IDSRLQASVRC
Trigger: ACAGCGAACGGAGGCTTGAAGCCTACTGTCTATCCATACAAACTTTACAGGCTCTTGCCTATGAGATGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CCA 72 bp CATCAGGGCAGCCATCACAGAGCTCACACTGCAGCTTaGGCATCTCTTTATTCTCTTCTTCTTCTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: HQGSHHRAHTAA*ASLYSLLLLLL
Trigger: AAGAAGAAGAAGAAGAAGAGAATAAAGAGATGCCCAAGCTGCAGTGTGAGCTCTGTGATGGCTGCCCTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093798.9
ENSMUST00000152594.8
CDS CAA 72 bp CGGAACGATGAACGTATCAGGGGCAGATTCACCCCTTaGACTGCTTCCTTGAGCACTTACATAGGAAGAATT +
Preference number: 6 (lower is better)
Translates to: RNDERIRGRFTP*TASLSTYIGRI
Trigger: AATTCTTCCTATGTAAGTGCTCAAGGAAGCAGTCAAAGGGGTGAATCTGCCCCTGATACGTTCATCGTTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CAA 72 bp TTACTGTTATCTGGCAAAGGGGTGCAACATTGCTATTaGTGGAGGTACCGGGCAGAGCAGGTTTTGCGATAT +
Preference number: 6 (lower is better)
Translates to: LLLSGKGVQHCY*WRYRAEQVLRY
Trigger: ATATCGCAAAACCTGCTCTGCCCGGTACCTCCACAAATAGCAATGTTGCACCCCTTTGCCAGATAACAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CCA 72 bp CTTCGGCTTTCAGATCATCCAGCTCCAAGACGTGACTaGAAATGCAGATCGTATGGCTCCAAAAGATGTTTT +
Preference number: 6 (lower is better)
Translates to: LRLSDHPAPRRD*KCRSYGSKRCF
Trigger: AAAACATCTTTTGGAGCCATACGATCTGCATTTCCAGTCACGTCTTGGAGCTGGATGATCTGAAAGCCGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000128269.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CAA 72 bp ACTGACACCTCAGTTGAATCGAAGTTATCGACGAGATaGGTTTTCACTGCCTGCTTCCTCCATTTGATGCCT +
Preference number: 6 (lower is better)
Translates to: TDTSVESKLSTR*VFTACFLHLMP
Trigger: AGGCATCAAATGGAGGAAGCAGGCAGTGAAAACCAATCTCGTCGATAACTTCGATTCAACTGAGGTGTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CAA 72 bp CCAATTTTTACTGTTATCTGGCAAAGGGGTGCAACATaGCTATTTGTGGAGGTACCGGGCAGAGCAGGTTTT +
Preference number: 6 (lower is better)
Translates to: PIFTVIWQRGAT*LFVEVPGRAGF
Trigger: AAAACCTGCTCTGCCCGGTACCTCCACAAATAGCAATGTTGCACCCCTTTGCCAGATAACAGTAAAAATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CAA 90 bp GTGGAAGAAACTGACACCTCAGTTGAATCGAAGTTATCGACGAGATaGGTTTTCACTGCCTGCTTCCTCCATTTGATGCCTTCTGCATTT +
Preference number: 6 (lower is better)
Translates to: VEETDTSVESKLSTR*VFTACFLHLMPSAF
Trigger: AAATGCAGAAGGCATCAAATGGAGGAAGCAGGCAGTGAAAACCAATCTCGTCGATAACTTCGATTCAACTGAGGTGTCAGTTTCTTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS GCA 72 bp ACTTACATAGGAAGAATTCCGGTAGCTCTTATAAGGTaGCCTCTTGCATCTCATAGGCAAGAGCCTGTAAAG +
Preference number: 6 (lower is better)
Translates to: TYIGRIPVALIR*PLASHRQEPVK
Trigger: CTTTACAGGCTCTTGCCTATGAGATGCAAGAGGGCACCTTATAAGAGCTACCGGAATTCTTCCTATGTAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS TCA 72 bp CGTATGGCTCCAAAAGATGTTTTTGAAATAAAGACTTaGGGCGGCCAGGACATTGCTGTGGGCTTTAAACTT +
Preference number: 6 (lower is better)
Translates to: RMAPKDVFEIKT*GGQDIAVGFKL
Trigger: AAGTTTAAAGCCCACAGCAATGTCCTGGCCGCCTCAAGTCTTTATTTCAAAAACATCTTTTGGAGCCATACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000128269.8
ENSMUST00000140121.8
ENSMUST00000152594.8
CDS CCA 72 bp GCAGAGCAGGTTTTGCGATATAAGTTTCAATCTTACTaGTTTCTTCAGCGTTTGTGGTTTTGCCTGAAGACC +
Preference number: 6 (lower is better)
Translates to: AEQVLRYKFQSY*FLQRLWFCLKT
Trigger: GGTCTTCAGGCAAAACCACAAACGCTGAAGAAACCAGTAAGATTGAAACTTATATCGCAAAACCTGCTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CCA 72 bp TTCACGATGGCTTCGTTCCCAATTTTTACTGTTATCTaGCAAAGGGGTGCAACATTGCTATTTGTGGAGGTA +
Preference number: 6 (lower is better)
Translates to: FTMASFPIFTVI*QRGATLLFVEV
Trigger: TACCTCCACAAATAGCAATGTTGCACCCCTTTGCCAGATAACAGTAAAAATTGGGAACGAAGCCATCGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CAA 72 bp CGATATAAGTTTCAATCTTACTGGTTTCTTCAGCGTTaGTGGTTTTGCCTGAAGACCCTCCGTGATCAGCAA +
Preference number: 6 (lower is better)
Translates to: RYKFQSYWFLQR*WFCLKTLRDQQ
Trigger: TTGCTGATCACGGAGGGTCTTCAGGCAAAACCACAAACGCTGAAGAAACCAGTAAGATTGAAACTTATATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CAA 72 bp CATTGCTATTTGTGGAGGTACCGGGCAGAGCAGGTTTaGCGATATAAGTTTCAATCTTACTGGTTTCTTCAG +
Preference number: 6 (lower is better)
Translates to: HCYLWRYRAEQV*RYKFQSYWFLQ
Trigger: CTGAAGAAACCAGTAAGATTGAAACTTATATCGCAAAACCTGCTCTGCCCGGTACCTCCACAAATAGCAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8
CDS CAA 72 bp AAGGACGTTTTCAGCAAAGGCTTTTATGTCATCCTTTaGTTCGCTGTCTTCGGAATCAGTGCAAAGCTGACT +
Preference number: 6 (lower is better)
Translates to: KDVFSKGFYVIL*FAVFGISAKLT
Trigger: AGTCAGCTTTGCACTGATTCCGAAGACAGCGAACAAAAGGATGACATAAAAGCCTTTGCTGAAAACGTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093798.9
ENSMUST00000152594.8
CDS CCA 72 bp TATAAGTTTCAATCTTACTGGTTTCTTCAGCGTTTGTaGTTTTGCCTGAAGACCCTCCGTGATCAGCAATAT +
Preference number: 6 (lower is better)
Translates to: YKFQSYWFLQRL*FCLKTLRDQQY
Trigger: ATATTGCTGATCACGGAGGGTCTTCAGGCAAAACCACAAACGCTGAAGAAACCAGTAAGATTGAAACTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000093798.9
ENSMUST00000126066.8
ENSMUST00000152594.8