Pregenerated sensors for ZBTB33 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048047Ensembl transcript IDs: ENSMUST00000049740.3, ENSMUST00000115142.3, ENSMUST00000131124.2
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AATAAACAAGAAGCCATTTGCCTCCAGTATTCCAGTTATGGTTTCTaGTATAATATAGCAGCAGTTTGCACACAGATTGGAACTTATTTT | + |
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Preference number: 1 (lower is better) Translates to: NKQEAICLQYSSYGF*YNIAAVCTQIGTYF Trigger: AAAATAAGTTCCAATCTGTGTGCAAACTGCTGCTATATTATAGCAGAAACCATAACTGGAATACTGGAGGCAAATGGCTTCTTGTTTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
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| 3UTR-3UTR TCA 90 bp | CATAAATGTACAGCATTCTACCTCTTGGTAAGCCGGGACTATCCTCTTCCTTTGAGAGAAGCAGAAGGCTaGTCTCCATTTGGACTGACA | + |
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Preference number: 2 (lower is better) Translates to: HKCTAFYLLVSRDYPLPLREAEG*SPFGLT Trigger: TGTCAGTCCAAATGGAGATCAGCCTTCTGCTTCTCT...CAAAGGAAGAGGATAGTCCCGGCTTACCAAGAGGTAGAATGCTGTACATTTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
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| 3UTR-3UTR GCA 90 bp | TGTCAAAATAAACAAGAAGCCATTTGCCTCCAGTATTCCAGTTATGGTTTCTGCGCATTTAAAAAGCTGTaGCAGCAGCCTCCCTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: CQNKQEAICLQYSSYGFCAFKKL*QQPPSP Trigger: GGGGGAGGGAGGCTGCTGGCACAGCTTTTTAAATGC...GCAGAAACCATAACTGGAATACTGGAGGCAAATGGCTTCTTGTTTATTTTGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
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| 3UTR-3UTR TCA 90 bp | CATAAATGTACAGCATTCTACCTCTTGGTAAGCCGGGACTATCCTCTTCCTTTGGATCTCCATTTGGACTaGCAGAATAAACCAAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: HKCTAFYLLVSRDYPLPLDLHLD*QNKPSE Trigger: CTCACTTGGTTTATTCTGTCAGTCCAAATGGAGATC...CAAAGGAAGAGGATAGTCCCGGCTTACCAAGAGGTAGAATGCTGTACATTTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
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| 3UTR-3UTR GCA 90 bp | CATAAATGTACAGCATTCTACCTCTTGGTAAGCCGGGACTATCCTCTTCCTTTGTCCAGTTATGGTTTCTaGTATAATATAGCAGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: HKCTAFYLLVSRDYPLPLSSYGF*YNIAAV Trigger: AACTGCTGCTATATTATAGCAGAAACCATAACTGGA...CAAAGGAAGAGGATAGTCCCGGCTTACCAAGAGGTAGAATGCTGTACATTTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
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| 3UTR-3UTR TCA 90 bp | AGTAGAGTGTTAACCTGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTGTTTTACAGGTCTTCTaGAATCCACACCCCTTAATT | + |
|
Preference number: 2 (lower is better) Translates to: SRVLTWKGNIISCTRVYIVLQVF*NPHPLI Trigger: AATTAAGGGGTGTGGATTTCAGAAGACCTGTAAAAC...AATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCAGGTTAACACTCTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
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| 3UTR-3UTR TCA 90 bp | GCAACTAGTCTACTTTCAGAGGACATGGTAGATCAAATTAACACGTTTCTACCTGTTTTACAGGTCTTCTaGAATCCACACCCCTTAATT | + |
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Preference number: 2 (lower is better) Translates to: ATSLLSEDMVDQINTFLPVLQVF*NPHPLI Trigger: AATTAAGGGGTGTGGATTTCAGAAGACCTGTAAAAC...AGGTAGAAACGTGTTAATTTGATCTACCATGTCCTCTGAAAGTAGACTAGTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
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| 3UTR-3UTR TCA 90 bp | CTACAAAATTCCAATCTAATAATGGCTAGGAGTAAAGAGTTATTGTCCAGAGGATATTCCTGCAAATACTaGTTCTTGATACCCTCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: LQNSNLIMARSKELLSRGYSCKY*FLIPSA Trigger: AGCTGAGGGTATCAAGAATCAGTATTTGCAGGAATA...TCCTCTGGACAATAACTCTTTACTCCTAGCCATTATTAGATTGGAATTTTGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
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| 3UTR CAA 90 bp | TTGCTACAAAATTCCAATCTAATAATGGCTAGGAGTAAAGAGTTATaGTCCAGAGGAGTATTCCACAAAAACCTCTCAAGGTTGGATATA | + |
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Preference number: 2 (lower is better) Translates to: LLQNSNLIMARSKEL*SRGVFHKNLSRLDI Trigger: TATATCCAACCTTGAGAGGTTTTTGTGGAATACTCCTCTGGACAATAACTCTTTACTCCTAGCCATTATTAGATTGGAATTTTGTAGCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
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| 3UTR CCA 72 bp | TCACAGTGGGAGAGAAGCAGAAGGCTGATCTCCATTTaGACTGACAGAATAAACCAAGTGAGGACTTACTCT | + |
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Preference number: 3 (lower is better) Translates to: SQWERSRRLISI*TDRINQVRTYS Trigger: AGAGTAAGTCCTCACTTGGTTTATTCTGTCAGTCCAAATGGAGATCAGCCTTCTGCTTCTCTCCCACTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
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| 3UTR TCA 72 bp | AAGTCTTATTATGACAAACTGATTTTACCTAGCAGTTaGCACCAAAACATCCTTATCACCGACACTGGTAGA | + |
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Preference number: 3 (lower is better) Translates to: KSYYDKLILPSS*HQNILITDTGR Trigger: TCTACCAGTGTCGGTGATAAGGATGTTTTGGTGTCAACTGCTAGGTAAAATCAGTTTGTCATAATAAGACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
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| 3UTR GCA 72 bp | AGCTGGCATTATTGTCAAAATAAACAAGAAGCCATTTaGCTCCAGTATTCCAGTTATGGTTTCTGCTATAAT | + |
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Preference number: 3 (lower is better) Translates to: SWHYCQNKQEAI*LQYSSYGFCYN Trigger: ATTATAGCAGAAACCATAACTGGAATACTGGAGGCAAATGGCTTCTTGTTTATTTTGACAATAATGCCAGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
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| 3UTR CCA 72 bp | TTAGCCCAATTGAACAAATTCTTCAGTGACTCTGAGTaGAGGATAGTGACCACCAAAATGATAACAAAATTA | + |
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Preference number: 3 (lower is better) Translates to: LAQLNKFFSDSE*RIVTTKMITKL Trigger: TAATTTTGTTATCATTTTGGTGGTCACTATCCTCCACTCAGAGTCACTGAAGAATTTGTTCAATTGGGCTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
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| CDS-3UTR TCA 90 bp | CTAGTTCTTGTCCTCCCTGCAAACTCTAGAAGCTGCTTTTCAGTAGGCACAAAGATCTTCCCAGAACGTTaGCTTGTTCTGAGGAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LVLVLPANSRSCFSVGTKIFPER*LVLRRS Trigger: ACTCCTCCTCAGAACAAGTCAACGTTCTGGGAAGAT...CTTTGTGCCTACTGAAAAGCAGCTTCTAGAGTTTGCAGGGAGGACAAGAACTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
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| CDS-3UTR CCA 90 bp | CATAAATGTACAGCATTCTACCTCTTGGTAAGCCGGGACTATCCTCTTCCTTTGGCTCATTATCAAGTTTaGCCTCCCCTCCATCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: HKCTAFYLLVSRDYPLPLAHYQV*PPLHQG Trigger: ACCCTGATGGAGGGGAGGCCAAACTTGATAATGAGC...CAAAGGAAGAGGATAGTCCCGGCTTACCAAGAGGTAGAATGCTGTACATTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
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| CDS-3UTR TCA 90 bp | CTAGTTCTTGTCCTCCCTGCAAACTCTAGAAGCTGCTTTTCAGTAGGCACAAAGAGACTGGCAGAGTACTaGATGTCTGTAGCAGAAATC | + |
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Preference number: 4 (lower is better) Translates to: LVLVLPANSRSCFSVGTKRLAEY*MSVAEI Trigger: GATTTCTGCTACAGACATTCAGTACTCTGCCAGTCT...CTTTGTGCCTACTGAAAAGCAGCTTCTAGAGTTTGCAGGGAGGACAAGAACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
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| CDS-3UTR CCA 90 bp | AGAAGGCTGATCTCCATTTGGACTGACAGAATAAACCAAGTGAGGACTTACTCTAATAGCAACAGAGGCTaGGTTAGGCTGGACCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: RRLISIWTDRINQVRTYSNSNRG*VRLDLC Trigger: ACACAGGTCCAGCCTAACCCAGCCTCTGTTGCTATT...AGAGTAAGTCCTCACTTGGTTTATTCTGTCAGTCCAAATGGAGATCAGCCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
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| CDS-3UTR TCA 90 bp | ATGAGCGGAAAGCTAAACTATACAGATACTTCAGGGGTGTTCAATCTCTACTCATGGCTTAGAGTTGCCTaGTTCACAGGAGTGGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: MSGKLNYTDTSGVFNLYSWLRVA*FTGVGS Trigger: ACTTCCCACTCCTGTGAATCAGGCAACTCTAAGCCA...TGAGTAGAGATTGAACACCCCTGAAGTATCTGTATAGTTTAGCTTTCCGCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
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| CDS-3UTR TCA 90 bp | CTAGTTCTTGTCCTCCCTGCAAACTCTAGAAGCTGCTTTTCAGTAGGCACAAAGACTGAAGAGGACATATaGTTTGGGAGTGAAGAACTG | + |
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Preference number: 4 (lower is better) Translates to: LVLVLPANSRSCFSVGTKTEEDI*FGSEEL Trigger: CAGTTCTTCACTCCCAAATCATATGTCCTCTTCAGT...CTTTGTGCCTACTGAAAAGCAGCTTCTAGAGTTTGCAGGGAGGACAAGAACTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
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| CDS-3UTR TCA 90 bp | TGTCAAAATAAACAAGAAGCCATTTGCCTCCAGTATTCCAGTTATGGTTTCTGCCCACACGTTAAACACTaGTACCTTCGCTCCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: CQNKQEAICLQYSSYGFCPHVKH*YLRSPV Trigger: CACAGGGGAGCGAAGGTATCAGTGTTTAACGTGTGG...GCAGAAACCATAACTGGAATACTGGAGGCAAATGGCTTCTTGTTTATTTTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
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| CDS-3UTR GCA 90 bp | CTAGTTCTTGTCCTCCCTGCAAACTCTAGAAGCTGCTTTTCAGTAGGCACAAAGTGGCAAATCCTCCTTTaGAGGCAAAATTTCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: LVLVLPANSRSCFSVGTKWQILL*RQNFRA Trigger: TGCTCTGAAATTTTGCCTGCAAAGGAGGATTTGCCA...CTTTGTGCCTACTGAAAAGCAGCTTCTAGAGTTTGCAGGGAGGACAAGAACTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
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| CDS-3UTR GCA 90 bp | AGTAGAGTGTTAACCTGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTACTGGCACTCGGTGGTaGAGTAAGTGGAGCCTGATT | + |
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Preference number: 4 (lower is better) Translates to: SRVLTWKGNIISCTRVYITGTRW*SKWSLI Trigger: AATCAGGCTCCACTTACTGCACCACCGAGTGCCAGT...AATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCAGGTTAACACTCTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
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| CDS-3UTR TCA 90 bp | AGAAGGCTGATCTCCATTTGGACTGACAGAATAAACCAAGTGAGGACTTACTCTACAGGAGTGGGAAGTTaGGTAGGTGTGATGTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: RRLISIWTDRINQVRTYSTGVGS*VGVMFV Trigger: AACAAACATCACACCTACTCAACTTCCCACTCCTGT...AGAGTAAGTCCTCACTTGGTTTATTCTGTCAGTCCAAATGGAGATCAGCCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
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| CDS-3UTR TCA 90 bp | GCAACTAGTCTACTTTCAGAGGACATGGTAGATCAAATTAACACGTTTCTACCTCATATGATTTGGGAGTaGAGAACTGGCACTCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: ATSLLSEDMVDQINTFLPHMIWE*RTGTRW Trigger: CCACCGAGTGCCAGTTCTTCACTCCCAAATCATATG...AGGTAGAAACGTGTTAATTTGATCTACCATGTCCTCTGAAAGTAGACTAGTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
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| CDS-3UTR TCA 90 bp | AGTAGAGTGTTAACCTGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTCATATGATTTGGGAGTaGAGAACTGGCACTCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SRVLTWKGNIISCTRVYIHMIWE*RTGTRW Trigger: CCACCGAGTGCCAGTTCTTCACTCCCAAATCATATG...AATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCAGGTTAACACTCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
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| CDS-3UTR TCA 90 bp | TTTACCTTTTCAAATGAGCGGAAAGCTAAACTATACAGATACTTCAGGGGTGTTCTTCGCTCCCCTGTGTaGTGGATTTCATGCTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: FTFSNERKAKLYRYFRGVLRSPV*WISCLV Trigger: CACCAAGCATGAAATCCATCACACAGGGGAGCGAAG...AACACCCCTGAAGTATCTGTATAGTTTAGCTTTCCGCTCATTTGAAAAGGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
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| CDS-3UTR CCA 90 bp | AGTAGAGTGTTAACCTGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTAATAGCAACAGAGGCTaGGTTAGGCTGGACCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: SRVLTWKGNIISCTRVYINSNRG*VRLDLC Trigger: ACACAGGTCCAGCCTAACCCAGCCTCTGTTGCTATT...AATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCAGGTTAACACTCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
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| CDS-3UTR TCA 90 bp | TGTCAAAATAAACAAGAAGCCATTTGCCTCCAGTATTCCAGTTATGGTTTCTGCTATGCTTTTAACCTGTaGCAGTGGGACACCAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: CQNKQEAICLQYSSYGFCYAFNL*QWDTKL Trigger: GAGCTTGGTGTCCCACTGTCACAGGTTAAAAGCATA...GCAGAAACCATAACTGGAATACTGGAGGCAAATGGCTTCTTGTTTATTTTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
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| CDS-3UTR TCA 90 bp | CCTGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTAGTAACTCCAGTAACAGGAGTGGGAAGTTaGGTAGGTGTGATGTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: PGRGTLSAVLGYILVTPVTGVGS*VGVMFV Trigger: AACAAACATCACACCTACTCAACTTCCCACTCCTGT...TACTGGAGTTACTAATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
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| CDS-3UTR TCA 90 bp | TGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTAGTAACTCCAGTAATCCAGAGATGTATTACTaGCTGCTGAGTCTGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: WKGNIISCTRVYISNSSNPEMYY*LLSLDW Trigger: CCAGTCCAGACTCAGCAGTCAGTAATACATCTCTGG...ATTACTGGAGTTACTAATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
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| CDS-3UTR TCA 90 bp | CTACAAAATTCCAATCTAATAATGGCTAGGAGTAAAGAGTTATTGTCCAGAGGACTTCGCTCCCCTGTGTaGTGGATTTCATGCTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: LQNSNLIMARSKELLSRGLRSPV*WISCLV Trigger: CACCAAGCATGAAATCCATCACACAGGGGAGCGAAG...TCCTCTGGACAATAACTCTTTACTCCTAGCCATTATTAGATTGGAATTTTGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
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| CDS-3UTR TCA 90 bp | CCCTGCACCTTTAAAAATTTACCTTTTCAAATGAGCGGAAAGCTAAACTATACACCACACGTTAAACACTaGTACCTTCGCTCCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: PCTFKNLPFQMSGKLNYTPHVKH*YLRSPV Trigger: CACAGGGGAGCGAAGGTATCAGTGTTTAACGTGTGG...TGTATAGTTTAGCTTTCCGCTCATTTGAAAAGGTAAATTTTTAAAGGTGCAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
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| CDS-3UTR TCA 90 bp | AGTAGAGTGTTAACCTGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTAACGTTGACTTGTTCTaGGGAGGAGTAGATGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: SRVLTWKGNIISCTRVYINVDLF*GGVDVV Trigger: GACCACATCTACTCCTCCTCAGAACAAGTCAACGTT...AATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCAGGTTAACACTCTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
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| CDS-3UTR GCA 90 bp | ATTAACAATGCAACTAGTCTACTTTCAGAGGACATGGTAGATCAAATTAACACGACTGGCACTCGGTGGTaGAGTAAGTGGAGCCTGATT | + |
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Preference number: 4 (lower is better) Translates to: INNATSLLSEDMVDQINTTGTRW*SKWSLI Trigger: AATCAGGCTCCACTTACTGCACCACCGAGTGCCAGT...CGTGTTAATTTGATCTACCATGTCCTCTGAAAGTAGACTAGTTGCATTGTTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
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| CDS-3UTR CCA 90 bp | AGTAGAGTGTTAACCTGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTAGGAGTTCAGCAGACTaGCAGAGTACTGAATGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SRVLTWKGNIISCTRVYIRSSAD*QSTECL Trigger: CAGACATTCAGTACTCTGCCAGTCTGCTGAACTCCT...AATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCAGGTTAACACTCTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
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| CDS-3UTR CCA 90 bp | AGTAGAGTGTTAACCTGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTGAAAGGATGTTCCTATaGGCCCGGAATTTTCGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SRVLTWKGNIISCTRVYIERMFL*ARNFRS Trigger: AGACCGAAAATTCCGGGCCCATAGGAACATCCTTTC...AATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCAGGTTAACACTCTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
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| CDS-3UTR CCA 90 bp | CCTGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTAGTAACTCCAGTAGATGGATTTCATGCTTaGTGCGGTATTCTGCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: PGRGTLSAVLGYILVTPVDGFHA*CGILQE Trigger: CTCTTGCAGAATACCGCACCAAGCATGAAATCCATC...TACTGGAGTTACTAATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
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| CDS-3UTR TCA 90 bp | GCAACTAGTCTACTTTCAGAGGACATGGTAGATCAAATTAACACGTTTCTACCTAGACTGGCAGAGTACTaGATGTCTGTAGCAGAAATC | + |
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Preference number: 4 (lower is better) Translates to: ATSLLSEDMVDQINTFLPRLAEY*MSVAEI Trigger: GATTTCTGCTACAGACATTCAGTACTCTGCCAGTCT...AGGTAGAAACGTGTTAATTTGATCTACCATGTCCTCTGAAAGTAGACTAGTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
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| CDS-3UTR TCA 90 bp | GCAACTAGTCTACTTTCAGAGGACATGGTAGATCAAATTAACACGTTTCTACCTTGTATTACTGACTGCTaGGTCTGGACTGGAGCTAAT | + |
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Preference number: 4 (lower is better) Translates to: ATSLLSEDMVDQINTFLPCITDC*VWTGAN Trigger: ATTAGCTCCAGTCCAGACTCAGCAGTCAGTAATACA...AGGTAGAAACGTGTTAATTTGATCTACCATGTCCTCTGAAAGTAGACTAGTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
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| CDS-3UTR TCA 90 bp | CCCTGCACCTTTAAAAATTTACCTTTTCAAATGAGCGGAAAGCTAAACTATACACCAGAGATGTATTACTaGCTGCTGAGTCTGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: PCTFKNLPFQMSGKLNYTPEMYY*LLSLDW Trigger: CCAGTCCAGACTCAGCAGTCAGTAATACATCTCTGG...TGTATAGTTTAGCTTTCCGCTCATTTGAAAAGGTAAATTTTTAAAGGTGCAGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
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| CDS-3UTR TCA 90 bp | GCAACTAGTCTACTTTCAGAGGACATGGTAGATCAAATTAACACGTTTCTACCTTTGGAGTTATCAGCCTaGGGGACCAGAGATGTATTA | + |
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Preference number: 4 (lower is better) Translates to: ATSLLSEDMVDQINTFLPLELSA*GTRDVL Trigger: TAATACATCTCTGGTCCCTCAGGCTGATAACTCCAA...AGGTAGAAACGTGTTAATTTGATCTACCATGTCCTCTGAAAGTAGACTAGTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
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| CDS-3UTR TCA 90 bp | GCAACTAGTCTACTTTCAGAGGACATGGTAGATCAAATTAACACGTTTCTACCTAACCTTGCAACCAGTTaGCAAGCCTTCGATTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: ATSLLSEDMVDQINTFLPNLATS*QAFDFS Trigger: ACTGAAATCGAAGGCTTGTCAACTGGTTGCAAGGTT...AGGTAGAAACGTGTTAATTTGATCTACCATGTCCTCTGAAAGTAGACTAGTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
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| CDS-3UTR TCA 90 bp | TGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTAGTAACTCCAGTAATAACGTTGACTTGTTCTaGGGAGGAGTAGATGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: WKGNIISCTRVYISNSSNNVDLF*GGVDVV Trigger: GACCACATCTACTCCTCCTCAGAACAAGTCAACGTT...ATTACTGGAGTTACTAATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
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| CDS-3UTR GCA 90 bp | ATGAGCGGAAAGCTAAACTATACAGATACTTCAGGGGTGTTCAATCTCTACTCACTCGTCAAGCAAATCTaGTCTAACACGGACAACTTT | + |
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Preference number: 4 (lower is better) Translates to: MSGKLNYTDTSGVFNLYSLVKQI*SNTDNF Trigger: AAAGTTGTCCGTGTTAGAGCAGATTTGCTTGACGAG...TGAGTAGAGATTGAACACCCCTGAAGTATCTGTATAGTTTAGCTTTCCGCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
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| CDS-3UTR GCA 90 bp | TGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTAGTAACTCCAGTAATAGGCTGGACCTGTGTTaGTGTGTTGTTACTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: WKGNIISCTRVYISNSSNRLDLC*CVVTWQ Trigger: TTGCCAAGTAACAACACAGCAACACAGGTCCAGCCT...ATTACTGGAGTTACTAATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR GCA 90 bp | AGAAGGCTGATCTCCATTTGGACTGACAGAATAAACCAAGTGAGGACTTACTCTGGAAGTACAGGAATCTaGATCTTCTGTGTCAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: RRLISIWTDRINQVRTYSGSTGI*IFCVND Trigger: ATCATTGACACAGAAGATGCAGATTCCTGTACTTCC...AGAGTAAGTCCTCACTTGGTTTATTCTGTCAGTCCAAATGGAGATCAGCCTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
||
| CDS-3UTR CCA 90 bp | TGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTAGTAACTCCAGTAATGAAAGGATGTTCCTATaGGCCCGGAATTTTCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WKGNIISCTRVYISNSSNERMFL*ARNFRS Trigger: AGACCGAAAATTCCGGGCCCATAGGAACATCCTTTC...ATTACTGGAGTTACTAATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CCA 90 bp | CCCTGCACCTTTAAAAATTTACCTTTTCAAATGAGCGGAAAGCTAAACTATACAGCTCATTATCAAGTTTaGCCTCCCCTCCATCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PCTFKNLPFQMSGKLNYTAHYQV*PPLHQG Trigger: ACCCTGATGGAGGGGAGGCCAAACTTGATAATGAGC...TGTATAGTTTAGCTTTCCGCTCATTTGAAAAGGTAAATTTTTAAAGGTGCAGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR TCA 90 bp | CCCTGCACCTTTAAAAATTTACCTTTTCAAATGAGCGGAAAGCTAAACTATACAAACTTGCCCAGCAACTaGGAAGAGCTGATGGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PCTFKNLPFQMSGKLNYTNLPSN*EELMEV Trigger: TACTTCCATCAGCTCTTCTCAGTTGCTGGGCAAGTT...TGTATAGTTTAGCTTTCCGCTCATTTGAAAAGGTAAATTTTTAAAGGTGCAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR TCA 90 bp | ATTAACAATGCAACTAGTCTACTTTCAGAGGACATGGTAGATCAAATTAACACGAACTTGCCCAGCAACTaGGAAGAGCTGATGGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: INNATSLLSEDMVDQINTNLPSN*EELMEV Trigger: TACTTCCATCAGCTCTTCTCAGTTGCTGGGCAAGTT...CGTGTTAATTTGATCTACCATGTCCTCTGAAAGTAGACTAGTTGCATTGTTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR TCA 90 bp | CCTGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTAGTAACTCCAGTATACAAGGACATTGACTaGAGAGGACATATGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGRGTLSAVLGYILVTPVYKDID*RGHMIW Trigger: CCAAATCATATGTCCTCTTCAGTCAATGTCCTTGTA...TACTGGAGTTACTAATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR TCA 90 bp | TGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTAGTAACTCCAGTAATTGTATTACTGACTGCTaGGTCTGGACTGGAGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: WKGNIISCTRVYISNSSNCITDC*VWTGAN Trigger: ATTAGCTCCAGTCCAGACTCAGCAGTCAGTAATACA...ATTACTGGAGTTACTAATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR TCA 90 bp | TGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTAGTAACTCCAGTAATTTGGAGTTATCAGCCTaGGGGACCAGAGATGTATTA | + |
|
Preference number: 4 (lower is better) Translates to: WKGNIISCTRVYISNSSNLELSA*GTRDVL Trigger: TAATACATCTCTGGTCCCTCAGGCTGATAACTCCAA...ATTACTGGAGTTACTAATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR TCA 90 bp | TTTACCTTTTCAAATGAGCGGAAAGCTAAACTATACAGATACTTCAGGGGTGTTAACCTTGCAACCAGTTaGCAAGCCTTCGATTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FTFSNERKAKLYRYFRGVNLATS*QAFDFS Trigger: ACTGAAATCGAAGGCTTGTCAACTGGTTGCAAGGTT...AACACCCCTGAAGTATCTGTATAGTTTAGCTTTCCGCTCATTTGAAAAGGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR TCA 90 bp | TTTACCTTTTCAAATGAGCGGAAAGCTAAACTATACAGATACTTCAGGGGTGTTCATCAGGGTCATCTTTaGCAGGGATCACTATATCGT | + |
|
Preference number: 4 (lower is better) Translates to: FTFSNERKAKLYRYFRGVHQGHL*QGSLYR Trigger: ACGATATAGTGATCCCTGTCAAAGATGACCCTGATG...AACACCCCTGAAGTATCTGTATAGTTTAGCTTTCCGCTCATTTGAAAAGGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR TCA 90 bp | TGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTAGTAACTCCAGTAATCATCAGGGTCATCTTTaGCAGGGATCACTATATCGT | + |
|
Preference number: 4 (lower is better) Translates to: WKGNIISCTRVYISNSSNHQGHL*QGSLYR Trigger: ACGATATAGTGATCCCTGTCAAAGATGACCCTGATG...ATTACTGGAGTTACTAATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR TCA 90 bp | CCAAAACATAAATGTACAGCATTCTACCTCTTGGTAAGCCGGGACTATCCTCTTTTCTTCTCCCAAGAATaGATGTTAAAATGTCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PKHKCTAFYLLVSRDYPLFFSQE*MLKCLR Trigger: GCGAAGACATTTTAACATTCATTCTTGGGAGAAGAA...AAGAGGATAGTCCCGGCTTACCAAGAGGTAGAATGCTGTACATTTATGTTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
||
| CDS-3UTR TCA 90 bp | AGTAGAGTGTTAACCTGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTGACAGGCATAGCACTTaGCTTATTAGAAAGGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: SRVLTWKGNIISCTRVYIDRHST*LIRKVC Trigger: GCATACCTTTCTAATAAGTCAAGTGCTATGCCTGTC...AATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCAGGTTAACACTCTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR TCA 90 bp | GCAACTAGTCTACTTTCAGAGGACATGGTAGATCAAATTAACACGTTTCTACCTGACAGGCATAGCACTTaGCTTATTAGAAAGGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: ATSLLSEDMVDQINTFLPDRHST*LIRKVC Trigger: GCATACCTTTCTAATAAGTCAAGTGCTATGCCTGTC...AGGTAGAAACGTGTTAATTTGATCTACCATGTCCTCTGAAAGTAGACTAGTTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR TCA 90 bp | CCCTGCACCTTTAAAAATTTACCTTTTCAAATGAGCGGAAAGCTAAACTATACAATCTTCCCAGAACGTTaGCTTGTTCTGAGGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PCTFKNLPFQMSGKLNYTIFPER*LVLRRS Trigger: ACTCCTCCTCAGAACAAGTCAACGTTCTGGGAAGAT...TGTATAGTTTAGCTTTCCGCTCATTTGAAAAGGTAAATTTTTAAAGGTGCAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR GCA 90 bp | GCAACTAGTCTACTTTCAGAGGACATGGTAGATCAAATTAACACGTTTCTACCTCTCGTCAAGCAAATCTaGTCTAACACGGACAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ATSLLSEDMVDQINTFLPLVKQI*SNTDNF Trigger: AAAGTTGTCCGTGTTAGAGCAGATTTGCTTGACGAG...AGGTAGAAACGTGTTAATTTGATCTACCATGTCCTCTGAAAGTAGACTAGTTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR GCA 90 bp | ATTAACAATGCAACTAGTCTACTTTCAGAGGACATGGTAGATCAAATTAACACGAGGCTGGACCTGTGTTaGTGTGTTGTTACTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: INNATSLLSEDMVDQINTRLDLC*CVVTWQ Trigger: TTGCCAAGTAACAACACAGCAACACAGGTCCAGCCT...CGTGTTAATTTGATCTACCATGTCCTCTGAAAGTAGACTAGTTGCATTGTTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR GCA 90 bp | CCTGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTAGTAACTCCAGTAGGAAGTACAGGAATCTaGATCTTCTGTGTCAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: PGRGTLSAVLGYILVTPVGSTGI*IFCVND Trigger: ATCATTGACACAGAAGATGCAGATTCCTGTACTTCC...TACTGGAGTTACTAATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CCA 90 bp | CCCTGCACCTTTAAAAATTTACCTTTTCAAATGAGCGGAAAGCTAAACTATACAAGGAGTTCAGCAGACTaGCAGAGTACTGAATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PCTFKNLPFQMSGKLNYTRSSAD*QSTECL Trigger: CAGACATTCAGTACTCTGCCAGTCTGCTGAACTCCT...TGTATAGTTTAGCTTTCCGCTCATTTGAAAAGGTAAATTTTTAAAGGTGCAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CCA 90 bp | AAAGAACAGTTAGATTTCTTCAAAGTCTACTCAGAAAACTATGTCCCTGCACCTGATGGATTTCATGCTTaGTGCGGTATTCTGCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KEQLDFFKVYSENYVPAPDGFHA*CGILQE Trigger: CTCTTGCAGAATACCGCACCAAGCATGAAATCCATC...AGGTGCAGGGACATAGTTTTCTGAGTAGACTTTGAAGAAATCTAACTGTTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR TCA 90 bp | TGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTAGTAACTCCAGTAATACTGAAGAGGACATATaGTTTGGGAGTGAAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: WKGNIISCTRVYISNSSNTEEDI*FGSEEL Trigger: CAGTTCTTCACTCCCAAATCATATGTCCTCTTCAGT...ATTACTGGAGTTACTAATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR TCA 90 bp | GCAACTAGTCTACTTTCAGAGGACATGGTAGATCAAATTAACACGTTTCTACCTTCTGTACAAGGACATTaGCTGAAGAGGACATATGAT | + |
|
Preference number: 4 (lower is better) Translates to: ATSLLSEDMVDQINTFLPSVQGH*LKRTYD Trigger: ATCATATGTCCTCTTCAGTCAATGTCCTTGTACAGA...AGGTAGAAACGTGTTAATTTGATCTACCATGTCCTCTGAAAGTAGACTAGTTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR GCA 90 bp | GCAACTAGTCTACTTTCAGAGGACATGGTAGATCAAATTAACACGTTTCTACCTTTCACGCCTAGTAACTaGCCTGATTTAATTAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: ATSLLSEDMVDQINTFLPFTPSN*PDLINS Trigger: CGAGTTAATTAAATCAGGGCAGTTACTAGGCGTGAA...AGGTAGAAACGTGTTAATTTGATCTACCATGTCCTCTGAAAGTAGACTAGTTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR GCA 90 bp | CCTGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTAGTAACTCCAGTAATCTTCACCGATATTTaGATAAACCTTGCAACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PGRGTLSAVLGYILVTPVIFTDI*INLATS Trigger: ACTGGTTGCAAGGTTTATGCAAATATCGGTGAAGAT...TACTGGAGTTACTAATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR GCA 90 bp | CCTGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTAGTAACTCCAGTAATTCAAACTCAGTACTaGCATCGGTTACATTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PGRGTLSAVLGYILVTPVIQTQY*HRLHSV Trigger: AACAGAATGTAACCGATGGCAGTACTGAGTTTGAAT...TACTGGAGTTACTAATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CCA 90 bp | CTACAAAATTCCAATCTAATAATGGCTAGGAGTAAAGAGTTATTGTCCAGAGGATGCTGTGTTGTTACTTaGCAAATCCTCCTTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQNSNLIMARSKELLSRGCCVVT*QILLCR Trigger: CCTGCAAAGGAGGATTTGCCAAGTAACAACACAGCA...TCCTCTGGACAATAACTCTTTACTCCTAGCCATTATTAGATTGGAATTTTGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
||
| CDS-3UTR GCA 90 bp | AAAGAACAGTTAGATTTCTTCAAAGTCTACTCAGAAAACTATGTCCCTGCACCTTTCACGCCTAGTAACTaGCCTGATTTAATTAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: KEQLDFFKVYSENYVPAPFTPSN*PDLINS Trigger: CGAGTTAATTAAATCAGGGCAGTTACTAGGCGTGAA...AGGTGCAGGGACATAGTTTTCTGAGTAGACTTTGAAGAAATCTAACTGTTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR GCA 90 bp | TGTCAAAATAAACAAGAAGCCATTTGCCTCCAGTATTCCAGTTATGGTTTCTGCATCTTCACCGATATTTaGATAAACCTTGCAACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CQNKQEAICLQYSSYGFCIFTDI*INLATS Trigger: ACTGGTTGCAAGGTTTATGCAAATATCGGTGAAGAT...GCAGAAACCATAACTGGAATACTGGAGGCAAATGGCTTCTTGTTTATTTTGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
||
| CDS-3UTR GCA 90 bp | TGTCAAAATAAACAAGAAGCCATTTGCCTCCAGTATTCCAGTTATGGTTTCTGCATTCAAACTCAGTACTaGCATCGGTTACATTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CQNKQEAICLQYSSYGFCIQTQY*HRLHSV Trigger: AACAGAATGTAACCGATGGCAGTACTGAGTTTGAAT...GCAGAAACCATAACTGGAATACTGGAGGCAAATGGCTTCTTGTTTATTTTGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
||
| 3UTR CAA 72 bp | ACTGCTGAGACTGCATTCATGAAACACATTTTTCAATaGAGAGCTGCTTTTGAGCAGACCCTATATTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TAETAFMKHIFQ*RAAFEQTLYSK Trigger: TTTTGAATATAGGGTCTGCTCAAAAGCAGCTCTCAATTGAAAAATGTGTTTCATGAATGCAGTCTCAGCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
||
| 3UTR CAA 72 bp | AATTCCAATCTAATAATGGCTAGGAGTAAAGAGTTATaGTCCAGAGGAGTATTCCACAAAAACCTCTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSNLIMARSKEL*SRGVFHKNLSR Trigger: CCTTGAGAGGTTTTTGTGGAATACTCCTCTGGACAATAACTCTTTACTCCTAGCCATTATTAGATTGGAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
||
| CDS-3UTR TCA 90 bp | ATTAACAATGCAACTAGTCTACTTTCAGAGGACATGGTAGATCAAATTAACACGTACAAGGACATTGACTaGAGAGGACATATGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: INNATSLLSEDMVDQINTYKDID*RGHMIW Trigger: CCAAATCATATGTCCTCTTCAGTCAATGTCCTTGTA...CGTGTTAATTTGATCTACCATGTCCTCTGAAAGTAGACTAGTTGCATTGTTAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR TCA 90 bp | CCCTGCACCTTTAAAAATTTACCTTTTCAAATGAGCGGAAAGCTAAACTATACATCTGTACAAGGACATTaGCTGAAGAGGACATATGAT | + |
|
Preference number: 4 (lower is better) Translates to: PCTFKNLPFQMSGKLNYTSVQGH*LKRTYD Trigger: ATCATATGTCCTCTTCAGTCAATGTCCTTGTACAGA...TGTATAGTTTAGCTTTCCGCTCATTTGAAAAGGTAAATTTTTAAAGGTGCAGGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR TCA 90 bp | TTTACCTTTTCAAATGAGCGGAAAGCTAAACTATACAGATACTTCAGGGGTGTTTTCTTCTCCCAAGAATaGATGTTAAAATGTCTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: FTFSNERKAKLYRYFRGVFFSQE*MLKCLR Trigger: GCGAAGACATTTTAACATTCATTCTTGGGAGAAGAA...AACACCCCTGAAGTATCTGTATAGTTTAGCTTTCCGCTCATTTGAAAAGGTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR GCA 90 bp | CCCTGCACCTTTAAAAATTTACCTTTTCAAATGAGCGGAAAGCTAAACTATACACTTGGTGCGGTATTCTaGAAGAGGAAATACTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: PCTFKNLPFQMSGKLNYTLGAVF*KRKYFI Trigger: GATAAAGTATTTCCTCTTGCAGAATACCGCACCAAG...TGTATAGTTTAGCTTTCCGCTCATTTGAAAAGGTAAATTTTTAAAGGTGCAGGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR TCA 90 bp | CTACAAAATTCCAATCTAATAATGGCTAGGAGTAAAGAGTTATTGTCCAGAGGATTTCAGAGCAGAAAATaGCATCGTCATCATCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LQNSNLIMARSKELLSRGFQSRK*HRHHHH Trigger: ATGATGATGATGACGATGTCATTTTCTGCTCTGAAA...TCCTCTGGACAATAACTCTTTACTCCTAGCCATTATTAGATTGGAATTTTGTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
||
| CDS-3UTR TCA 90 bp | ATTAACAATGCAACTAGTCTACTTTCAGAGGACATGGTAGATCAAATTAACACGTTTCAGAGCAGAAAATaGCATCGTCATCATCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: INNATSLLSEDMVDQINTFQSRK*HRHHHH Trigger: ATGATGATGATGACGATGTCATTTTCTGCTCTGAAA...CGTGTTAATTTGATCTACCATGTCCTCTGAAAGTAGACTAGTTGCATTGTTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CCA 90 bp | TTTACCTTTTCAAATGAGCGGAAAGCTAAACTATACAGATACTTCAGGGGTGTTATGATCCATCTAAAGTaGTACTTTTGGAGTTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: FTFSNERKAKLYRYFRGVMIHLK*YFWSYQ Trigger: CTGATAACTCCAAAAGTACCACTTTAGATGGATCAT...AACACCCCTGAAGTATCTGTATAGTTTAGCTTTCCGCTCATTTGAAAAGGTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CCA 90 bp | TGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTAGTAACTCCAGTAATATGATCCATCTAAAGTaGTACTTTTGGAGTTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: WKGNIISCTRVYISNSSNMIHLK*YFWSYQ Trigger: CTGATAACTCCAAAAGTACCACTTTAGATGGATCAT...ATTACTGGAGTTACTAATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS CCA 90 bp | GCGCAAGGTGTCACTTCCGAAATAGCAACAGAGGCTGGGTTAGGCTaGACCTGTGTTGCTGTGTTGTTACTTGGCAAATCCTCCTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AQGVTSEIATEAGLG*TCVAVLLLGKSSFA Trigger: TGCAAAGGAGGATTTGCCAAGTAACAACACAGCAACACAGGTCCAGCCTAACCCAGCCTCTGTTGCTATTTCGGAAGTGACACCTTGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
||
| CDS CCA 90 bp | GTTATTGCTAGCGCAAGGTGTCACTTCCGAAATAGCAACAGAGGCTaGGTTAGGCTGGACCTGTGTTGCTGTGTTGTTACTTGGCAAATC | + |
|
Preference number: 5 (lower is better) Translates to: VIASARCHFRNSNRG*VRLDLCCCVVTWQI Trigger: GATTTGCCAAGTAACAACACAGCAACACAGGTCCAGCCTAACCCAGCCTCTGTTGCTATTTCGGAAGTGACACCTTGCGCTAGCAATAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGGCTGATCTCCATTTGGACTGACAGAATAAACCAAGTGAGGACTTACTCTAGCTCATTATCAAGTTaGGCCTCCCCTCCATCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RRLISIWTDRINQVRTYSSSLSS*ASPPSG Trigger: CCCTGATGGAGGGGAGGCCAAACTTGATAATGAGCT...AGAGTAAGTCCTCACTTGGTTTATTCTGTCAGTCCAAATGGAGATCAGCCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
||
| CDS TCA 90 bp | TGTGTCAATGATCCATCTAAAGTGGTACTTTTGGAGTTATCAGCCTaGGGGACCAGAGATGTATTACTGACTGCTGAGTCTGGACTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CVNDPSKVVLLELSA*GTRDVLLTAESGLE Trigger: CTCCAGTCCAGACTCAGCAGTCAGTAATACATCTCTGGTCCCTCAGGCTGATAACTCCAAAAGTACCACTTTAGATGGATCATTGACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
||
| CDS GCA 90 bp | CCTTCGCTCCCCTGTGTGATGGATTTCATGCTTGGTGCGGTATTCTaGAAGAGGAAATACTTTATCACAGTAACGGCACTGATACTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PSLPCVMDFMLGAVF*KRKYFITVTALILL Trigger: AAGAAGTATCAGTGCCGTTACTGTGATAAAGTATTTCCTCTTGCAGAATACCGCACCAAGCATGAAATCCATCACACAGGGGAGCGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
||
| CDS-3UTR CAA 90 bp | GCAACTAGTCTACTTTCAGAGGACATGGTAGATCAAATTAACACGTTTCTACCTACAGGGGGCGAGTTATaGCTAGCGCAAGGTGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: ATSLLSEDMVDQINTFLPTGGEL*LAQGVT Trigger: AGTGACACCTTGCGCTAGCAATAACTCGCCCCCTGT...AGGTAGAAACGTGTTAATTTGATCTACCATGTCCTCTGAAAGTAGACTAGTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS GCA 90 bp | GACAGTGGGACACCAAGCTCTGCTATAAATTTCACGCCTAGTAACTaGCCTGATTTAATTAACTCGTCAAGCAAATCTGCTCTAACACGG | + |
|
Preference number: 5 (lower is better) Translates to: DSGTPSSAINFTPSN*PDLINSSSKSALTR Trigger: CCGTGTTAGAGCAGATTTGCTTGACGAGTTAATTAAATCAGGGCAGTTACTAGGCGTGAAATTTATAGCAGAGCTTGGTGTCCCACTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
||
| CDS CCA 90 bp | AATTTTCGGTCTTCCACAATAACAGTAACATCACAAAAGAGACCATaGCCACGCTGTTCATTCAAGGAGTTCAGCAGACTGGCAGAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: NFRSSTITVTSQKRP*PRCSFKEFSRLAEY Trigger: GTACTCTGCCAGTCTGCTGAACTCCTTGAATGAACAGCGTGGCCATGGTCTCTTTTGTGATGTTACTGTTATTGTGGAAGACCGAAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAACAGTTAGATTTCTTCAAAGTCTACTCAGAAAACTATGTCCCTGCACCTACAGGGGGCGAGTTATaGCTAGCGCAAGGTGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: KEQLDFFKVYSENYVPAPTGGEL*LAQGVT Trigger: AGTGACACCTTGCGCTAGCAATAACTCGCCCCCTGT...AGGTGCAGGGACATAGTTTTCTGAGTAGACTTTGAAGAAATCTAACTGTTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CAA 90 bp | CATAAATGTACAGCATTCTACCTCTTGGTAAGCCGGGACTATCCTCTTCCTTTGATTAGAAGGTGGCTCTaGAGGAAGTACAGGAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: HKCTAFYLLVSRDYPLPLIRRWL*RKYRNL Trigger: CAGATTCCTGTACTTCCTCAAGAGCCACCTTCTAAT...CAAAGGAAGAGGATAGTCCCGGCTTACCAAGAGGTAGAATGCTGTACATTTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
||
| CDS-3UTR CAA 90 bp | TGTCAAAATAAACAAGAAGCCATTTGCCTCCAGTATTCCAGTTATGGTTTCTGCGTGTTTGGCTTAGAGTaGCCTGATTCACAGGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CQNKQEAICLQYSSYGFCVFGLE*PDSQEW Trigger: CCACTCCTGTGAATCAGGCAACTCTAAGCCAAACAC...GCAGAAACCATAACTGGAATACTGGAGGCAAATGGCTTCTTGTTTATTTTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
||
| CDS-3UTR CAA 90 bp | GCAACTAGTCTACTTTCAGAGGACATGGTAGATCAAATTAACACGTTTCTACCTGTGTTTGGCTTAGAGTaGCCTGATTCACAGGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ATSLLSEDMVDQINTFLPVFGLE*PDSQEW Trigger: CCACTCCTGTGAATCAGGCAACTCTAAGCCAAACAC...AGGTAGAAACGTGTTAATTTGATCTACCATGTCCTCTGAAAGTAGACTAGTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CAA 90 bp | ATGAGCGGAAAGCTAAACTATACAGATACTTCAGGGGTGTTCAATCTCTACTCACCATCAGGGTCATCTTaGACAGGGATCACTATATCG | + |
|
Preference number: 5 (lower is better) Translates to: MSGKLNYTDTSGVFNLYSPSGSS*TGITIS Trigger: CGATATAGTGATCCCTGTCAAAGATGACCCTGATGG...TGAGTAGAGATTGAACACCCCTGAAGTATCTGTATAGTTTAGCTTTCCGCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CAA 90 bp | CCTGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTAGTAACTCCAGTACCATCAGGGTCATCTTaGACAGGGATCACTATATCG | + |
|
Preference number: 5 (lower is better) Translates to: PGRGTLSAVLGYILVTPVPSGSS*TGITIS Trigger: CGATATAGTGATCCCTGTCAAAGATGACCCTGATGG...TACTGGAGTTACTAATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CAA 90 bp | AAAGAACAGTTAGATTTCTTCAAAGTCTACTCAGAAAACTATGTCCCTGCACCTAGCTCATTATCAAGTTaGGCCTCCCCTCCATCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KEQLDFFKVYSENYVPAPSSLSS*ASPPSG Trigger: CCCTGATGGAGGGGAGGCCAAACTTGATAATGAGCT...AGGTGCAGGGACATAGTTTTCTGAGTAGACTTTGAAGAAATCTAACTGTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CAA 90 bp | CCAAAACATAAATGTACAGCATTCTACCTCTTGGTAAGCCGGGACTATCCTCTTTTTCCAGCATCAACCTaGTATCCAACAGCATCATCC | + |
|
Preference number: 5 (lower is better) Translates to: PKHKCTAFYLLVSRDYPLFPAST*YPTASS Trigger: GGATGATGCTGTTGGATACAAGGTTGATGCTGGAAA...AAGAGGATAGTCCCGGCTTACCAAGAGGTAGAATGCTGTACATTTATGTTTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
||
| CDS TCA 90 bp | TTTGGAGTTATCAGCCTGAGGGACCAGAGATGTATTACTGACTGCTaGGTCTGGACTGGAGCTAATGATGTCATCATCATCATCTATAAT | + |
|
Preference number: 5 (lower is better) Translates to: FGVISLRDQRCITDC*VWTGANDVIIIIYN Trigger: ATTATAGATGATGATGATGACATCATTAGCTCCAGTCCAGACTCAGCAGTCAGTAATACATCTCTGGTCCCTCAGGCTGATAACTCCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
||
| CDS CCA 90 bp | GAAGTACAGGAATCTGCATCTTCTGTGTCAATGATCCATCTAAAGTaGTACTTTTGGAGTTATCAGCCTGAGGGACCAGAGATGTATTAC | + |
|
Preference number: 5 (lower is better) Translates to: EVQESASSVSMIHLK*YFWSYQPEGPEMYY Trigger: GTAATACATCTCTGGTCCCTCAGGCTGATAACTCCAAAAGTACCACTTTAGATGGATCATTGACACAGAAGATGCAGATTCCTGTACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
||
| CDS-3UTR CAA 90 bp | CCAAAACATAAATGTACAGCATTCTACCTCTTGGTAAGCCGGGACTATCCTCTTTCCATGTCAAGGCTTTaGTCACTAGAACTAGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PKHKCTAFYLLVSRDYPLSMSRL*SLELEG Trigger: ACCTTCTAGTTCTAGTGACAAAAGCCTTGACATGGA...AAGAGGATAGTCCCGGCTTACCAAGAGGTAGAATGCTGTACATTTATGTTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
||
| CDS-3UTR CAA 90 bp | TGTCAAAATAAACAAGAAGCCATTTGCCTCCAGTATTCCAGTTATGGTTTCTGCACCTGTGTTGCTGTGTaGTTACTTGGCAAATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CQNKQEAICLQYSSYGFCTCVAV*LLGKSS Trigger: GGAGGATTTGCCAAGTAACAACACAGCAACACAGGT...GCAGAAACCATAACTGGAATACTGGAGGCAAATGGCTTCTTGTTTATTTTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
||
| CDS-3UTR CAA 90 bp | GCAACTAGTCTACTTTCAGAGGACATGGTAGATCAAATTAACACGTTTCTACCTACCTGTGTTGCTGTGTaGTTACTTGGCAAATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ATSLLSEDMVDQINTFLPTCVAV*LLGKSS Trigger: GGAGGATTTGCCAAGTAACAACACAGCAACACAGGT...AGGTAGAAACGTGTTAATTTGATCTACCATGTCCTCTGAAAGTAGACTAGTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CAA 90 bp | GCAACTAGTCTACTTTCAGAGGACATGGTAGATCAAATTAACACGTTTCTACCTAATGTCTTCGCAAGCTaGTCAGACAGACATAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: ATSLLSEDMVDQINTFLPNVFAS*SDRHRT Trigger: GGTCCTATGTCTGTCTGACAAGCTTGCGAAGACATT...AGGTAGAAACGTGTTAATTTGATCTACCATGTCCTCTGAAAGTAGACTAGTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CAA 90 bp | ATGAGCGGAAAGCTAAACTATACAGATACTTCAGGGGTGTTCAATCTCTACTCAGTAAGCGATAAAGCTTaGAGTCCCCAGAAGGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: MSGKLNYTDTSGVFNLYSVSDKA*SPQKDL Trigger: AAGATCCTTCTGGGGACTCAAAGCTTTATCGCTTAC...TGAGTAGAGATTGAACACCCCTGAAGTATCTGTATAGTTTAGCTTTCCGCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CAA 90 bp | ATGAGCGGAAAGCTAAACTATACAGATACTTCAGGGGTGTTCAATCTCTACTCATTTCCAGCATCAACCTaGTATCCAACAGCATCATCC | + |
|
Preference number: 5 (lower is better) Translates to: MSGKLNYTDTSGVFNLYSFPAST*YPTASS Trigger: GGATGATGCTGTTGGATACAAGGTTGATGCTGGAAA...TGAGTAGAGATTGAACACCCCTGAAGTATCTGTATAGTTTAGCTTTCCGCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CAA 90 bp | ATGAGCGGAAAGCTAAACTATACAGATACTTCAGGGGTGTTCAATCTCTACTCACTTGGGCTTCATCTTTaGATTTTTCCATGTCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: MSGKLNYTDTSGVFNLYSLGLHL*IFPCQG Trigger: GCCTTGACATGGAAAAATCAAAAGATGAAGCCCAAG...TGAGTAGAGATTGAACACCCCTGAAGTATCTGTATAGTTTAGCTTTCCGCTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CAA 90 bp | CCTGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTAGTAACTCCAGTACTTGGGCTTCATCTTTaGATTTTTCCATGTCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGRGTLSAVLGYILVTPVLGLHL*IFPCQG Trigger: GCCTTGACATGGAAAAATCAAAAGATGAAGCCCAAG...TACTGGAGTTACTAATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CAA 90 bp | GCAACTAGTCTACTTTCAGAGGACATGGTAGATCAAATTAACACGTTTCTACCTTCCTCTTCCTCAGCCTaGTTTCCTGTTAAAACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ATSLLSEDMVDQINTFLPSSSSA*FPVKTA Trigger: TGCTGTTTTAACAGGAAACAAGGCTGAGGAAGAGGA...AGGTAGAAACGTGTTAATTTGATCTACCATGTCCTCTGAAAGTAGACTAGTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CAA 90 bp | TGTCAAAATAAACAAGAAGCCATTTGCCTCCAGTATTCCAGTTATGGTTTCTGCAAACCTTGCAACCAGTaGACAAGCCTTCGATTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: CQNKQEAICLQYSSYGFCKPCNQ*TSLRFQ Trigger: CTGAAATCGAAGGCTTGTCAACTGGTTGCAAGGTTT...GCAGAAACCATAACTGGAATACTGGAGGCAAATGGCTTCTTGTTTATTTTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049740.3 |
||
| CDS-3UTR CAA 90 bp | TGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTAGTAACTCCAGTAATAATGTCTTCGCAAGCTaGTCAGACAGACATAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: WKGNIISCTRVYISNSSNNVFAS*SDRHRT Trigger: GGTCCTATGTCTGTCTGACAAGCTTGCGAAGACATT...ATTACTGGAGTTACTAATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CAA 90 bp | AGTAGAGTGTTAACCTGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTTCCATGTCAAGGCTTTaGTCACTAGAACTAGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SRVLTWKGNIISCTRVYISMSRL*SLELEG Trigger: ACCTTCTAGTTCTAGTGACAAAAGCCTTGACATGGA...AATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCAGGTTAACACTCTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CAA 90 bp | TGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTAGTAACTCCAGTAATTTGGCAAATCCTCCTTaGCAGGCAAAATTTCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WKGNIISCTRVYISNSSNLANPP*QAKFQS Trigger: GCTCTGAAATTTTGCCTGCAAAGGAGGATTTGCCAA...ATTACTGGAGTTACTAATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CAA 90 bp | GCAACTAGTCTACTTTCAGAGGACATGGTAGATCAAATTAACACGTTTCTACCTCCTCCATTACATGTTTaGACCTTAAGCCTGGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: ATSLLSEDMVDQINTFLPPPLHV*TLSLDH Trigger: ATGATCCAGGCTTAAGGTCAAAACATGTAATGGAGG...AGGTAGAAACGTGTTAATTTGATCTACCATGTCCTCTGAAAGTAGACTAGTTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CAA 90 bp | TGGAAGGGGAACATTATCAGCTGTACTAGGGTATATATTAGTAACTCCAGTAATAAACCTTGCAACCAGTaGACAAGCCTTCGATTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: WKGNIISCTRVYISNSSNKPCNQ*TSLRFQ Trigger: CTGAAATCGAAGGCTTGTCAACTGGTTGCAAGGTTT...ATTACTGGAGTTACTAATATATACCCTAGTACAGCTGATAATGTTCCCCTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CAA 90 bp | TTTACCTTTTCAAATGAGCGGAAAGCTAAACTATACAGATACTTCAGGGGTGTTGTAAGCGATAAAGCTTaGAGTCCCCAGAAGGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: FTFSNERKAKLYRYFRGVVSDKA*SPQKDL Trigger: AAGATCCTTCTGGGGACTCAAAGCTTTATCGCTTAC...AACACCCCTGAAGTATCTGTATAGTTTAGCTTTCCGCTCATTTGAAAAGGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CAA 90 bp | ATTAACAATGCAACTAGTCTACTTTCAGAGGACATGGTAGATCAAATTAACACGTCCTCTTCCTCAGCCTaGTTTCCTGTTAAAACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: INNATSLLSEDMVDQINTSSSSA*FPVKTA Trigger: TGCTGTTTTAACAGGAAACAAGGCTGAGGAAGAGGA...CGTGTTAATTTGATCTACCATGTCCTCTGAAAGTAGACTAGTTGCATTGTTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CAA 90 bp | CCCTGCACCTTTAAAAATTTACCTTTTCAAATGAGCGGAAAGCTAAACTATACAATTAGAAGGTGGCTCTaGAGGAAGTACAGGAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PCTFKNLPFQMSGKLNYTIRRWL*RKYRNL Trigger: CAGATTCCTGTACTTCCTCAAGAGCCACCTTCTAAT...TGTATAGTTTAGCTTTCCGCTCATTTGAAAAGGTAAATTTTTAAAGGTGCAGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CAA 90 bp | AAAGAACAGTTAGATTTCTTCAAAGTCTACTCAGAAAACTATGTCCCTGCACCTCCTCCATTACATGTTTaGACCTTAAGCCTGGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: KEQLDFFKVYSENYVPAPPPLHV*TLSLDH Trigger: ATGATCCAGGCTTAAGGTCAAAACATGTAATGGAGG...AGGTGCAGGGACATAGTTTTCTGAGTAGACTTTGAAGAAATCTAACTGTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CAA 90 bp | GCAACTAGTCTACTTTCAGAGGACATGGTAGATCAAATTAACACGTTTCTACCTTATCTTCACCGATATTaGCATAAACCTTGCAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: ATSLLSEDMVDQINTFLPYLHRY*HKPCNQ Trigger: CTGGTTGCAAGGTTTATGCAAATATCGGTGAAGATA...AGGTAGAAACGTGTTAATTTGATCTACCATGTCCTCTGAAAGTAGACTAGTTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS-3UTR CAA 90 bp | CCCTGCACCTTTAAAAATTTACCTTTTCAAATGAGCGGAAAGCTAAACTATACATATCTTCACCGATATTaGCATAAACCTTGCAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: PCTFKNLPFQMSGKLNYTYLHRY*HKPCNQ Trigger: CTGGTTGCAAGGTTTATGCAAATATCGGTGAAGATA...TGTATAGTTTAGCTTTCCGCTCATTTGAAAAGGTAAATTTTTAAAGGTGCAGGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 |
||
| CDS CCA 72 bp | GTCACTTCCGAAATAGCAACAGAGGCTGGGTTAGGCTaGACCTGTGTTGCTGTGTTGTTACTTGGCAAATCC | + |
|
Preference number: 6 (lower is better) Translates to: VTSEIATEAGLG*TCVAVLLLGKS Trigger: GGATTTGCCAAGTAACAACACAGCAACACAGGTCCAGCCTAACCCAGCCTCTGTTGCTATTTCGGAAGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
||
| CDS TCA 72 bp | ATCAGCCTGAGGGACCAGAGATGTATTACTGACTGCTaGGTCTGGACTGGAGCTAATGATGTCATCATCATC | + |
|
Preference number: 6 (lower is better) Translates to: ISLRDQRCITDC*VWTGANDVIII Trigger: GATGATGATGACATCATTAGCTCCAGTCCAGACTCAGCAGTCAGTAATACATCTCTGGTCCCTCAGGCTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
||
| CDS TCA 72 bp | TATCAAGTTTGGCCTCCCCTCCATCAGGGTCATCTTTaGCAGGGATCACTATATCGTAAGTATCTTCACCGA | + |
|
Preference number: 6 (lower is better) Translates to: YQVWPPLHQGHL*QGSLYRKYLHR Trigger: TCGGTGAAGATACTTACGATATAGTGATCCCTGTCAAAGATGACCCTGATGGAGGGGAGGCCAAACTTGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
||
| CDS GCA 72 bp | CCCTGTGTGATGGATTTCATGCTTGGTGCGGTATTCTaGAAGAGGAAATACTTTATCACAGTAACGGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: PCVMDFMLGAVF*KRKYFITVTAL Trigger: CAGTGCCGTTACTGTGATAAAGTATTTCCTCTTGCAGAATACCGCACCAAGCATGAAATCCATCACACAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
||
| CDS CCA 72 bp | TGGAAGTATGTACTCGAGGCTGAAAGGATGTTCCTATaGGCCCGGAATTTTCGGTCTTCCACAATAACAGTA | + |
|
Preference number: 6 (lower is better) Translates to: WKYVLEAERMFL*ARNFRSSTITV Trigger: TACTGTTATTGTGGAAGACCGAAAATTCCGGGCCCATAGGAACATCCTTTCAGCCTCGAGTACATACTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
||
| CDS CCA 72 bp | GATACCTTCGCTCCCCTGTGTGATGGATTTCATGCTTaGTGCGGTATTCTGCAAGAGGAAATACTTTATCAC | + |
|
Preference number: 6 (lower is better) Translates to: DTFAPLCDGFHA*CGILQEEILYH Trigger: GTGATAAAGTATTTCCTCTTGCAGAATACCGCACCAAGCATGAAATCCATCACACAGGGGAGCGAAGGTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
||
| CDS TCA 72 bp | GATCCATCTAAAGTGGTACTTTTGGAGTTATCAGCCTaGGGGACCAGAGATGTATTACTGACTGCTGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: DPSKVVLLELSA*GTRDVLLTAES Trigger: AGACTCAGCAGTCAGTAATACATCTCTGGTCCCTCAGGCTGATAACTCCAAAAGTACCACTTTAGATGGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
||
| CDS CCA 72 bp | GAATCTGCATCTTCTGTGTCAATGATCCATCTAAAGTaGTACTTTTGGAGTTATCAGCCTGAGGGACCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ESASSVSMIHLK*YFWSYQPEGPE Trigger: CTCTGGTCCCTCAGGCTGATAACTCCAAAAGTACCACTTTAGATGGATCATTGACACAGAAGATGCAGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
||
| CDS TCA 72 bp | TGTTCATTCAAGGAGTTCAGCAGACTGGCAGAGTACTaGATGTCTGTAGCAGAAATCAGTTTTCTACTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CSFKEFSRLAEY*MSVAEISFLLS Trigger: GGAGAGTAGAAAACTGATTTCTGCTACAGACATTCAGTACTCTGCCAGTCTGCTGAACTCCTTGAATGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
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| CDS TCA 72 bp | TTGTTTCCTGTTAAAACAGCACTGTTAGGCGTCTGCTaGTTCTGTACAAGGACATTGACTGAAGAGGACATA | + |
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Preference number: 6 (lower is better) Translates to: LFPVKTALLGVC*FCTRTLTEEDI Trigger: TATGTCCTCTTCAGTCAATGTCCTTGTACAGAATCAGCAGACGCCTAACAGTGCTGTTTTAACAGGAAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
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| CDS TCA 72 bp | TCCAACAGCATCATCCTTCATGACAGGCATAGCACTTaGCTTATTAGAAAGGTATGCATACTGTCTGATCTG | + |
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Preference number: 6 (lower is better) Translates to: SNSIILHDRHST*LIRKVCILSDL Trigger: CAGATCAGACAGTATGCATACCTTTCTAATAAGTCAAGTGCTATGCCTGTCATGAAGGATGATGCTGTTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
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| CDS CCA 72 bp | TCTTCTGTGTCAATGATCCATCTAAAGTGGTACTTTTaGAGTTATCAGCCTGAGGGACCAGAGATGTATTAC | + |
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Preference number: 6 (lower is better) Translates to: SSVSMIHLKWYF*SYQPEGPEMYY Trigger: GTAATACATCTCTGGTCCCTCAGGCTGATAACTCCAAAAGTACCACTTTAGATGGATCATTGACACAGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
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| CDS CAA 72 bp | CAGGGATCACTATATCGTAAGTATCTTCACCGATATTaGCATAAACCTTGCAACCAGTTGACAAGCCTTCGA | + |
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Preference number: 6 (lower is better) Translates to: QGSLYRKYLHRY*HKPCNQLTSLR Trigger: TCGAAGGCTTGTCAACTGGTTGCAAGGTTTATGCAAATATCGGTGAAGATACTTACGATATAGTGATCCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
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| CDS GCA 72 bp | ACACCAAGCTCTGCTATAAATTTCACGCCTAGTAACTaGCCTGATTTAATTAACTCGTCAAGCAAATCTGCT | + |
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Preference number: 6 (lower is better) Translates to: TPSSAINFTPSN*PDLINSSSKSA Trigger: AGCAGATTTGCTTGACGAGTTAATTAAATCAGGGCAGTTACTAGGCGTGAAATTTATAGCAGAGCTTGGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
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| CDS GCA 72 bp | CATGTTTTACTTTCATACGCTTGTTTGGTGGCTCACTaGCAGATGTTTTTGGTAGCTCATTATCAAGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: HVLLSYACLVAH*QMFLVAHYQVW Trigger: CCAAACTTGATAATGAGCTACCAAAAACATCTGGCAGTGAGCCACCAAACAAGCGTATGAAAGTAAAACATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
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| CDS GCA 72 bp | GTCTTCGCAAGCTTGTCAGACAGACATAGGACCTTTTaGATACAATGCAAATATAATAGACCCTTCCATCTA | + |
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Preference number: 6 (lower is better) Translates to: VFASLSDRHRTF*IQCKYNRPFHL Trigger: TAGATGGAAGGGTCTATTATATTTGCATTGTATGCAAAAGGTCCTATGTCTGTCTGACAAGCTTGCGAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
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| CDS CAA 90 bp | CTATTAACTCATAGTGATCATCATGTTTTACTTTCATACGCTTGTTaGGTGGCTCACTGCCAGATGTTTTTGGTAGCTCATTATCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: LLTHSDHHVLLSYAC*VAHCQMFLVAHYQV Trigger: AACTTGATAATGAGCTACCAAAAACATCTGGCAGTGAGCCACCAAACAAGCGTATGAAAGTAAAACATGATGATCACTATGAGTTAATAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049740.3 ENSMUST00000115142.3 ENSMUST00000131124.2 |
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