Pregenerated sensors for ZBTB32 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006310Ensembl transcript IDs: ENSMUST00000108150.2, ENSMUST00000108151.3
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GAGCACAGGAAACTTTATTATAGTGATGAAATTGACAGTCCCCAGTTAATCTTCCCAGGCCGCCCTAGCTaGGCCCTTCTGCCTTTCATT | + |
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Preference number: 2 (lower is better) Translates to: EHRKLYYSDEIDSPQLIFPGRPS*ALLPFI Trigger: AATGAAAGGCAGAAGGGCTCAGCTAGGGCGGCCTGG...GAAGATTAACTGGGGACTGTCAATTTCATCACTATAATAAAGTTTCCTGTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108150.2 ENSMUST00000108151.3 |
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| 3UTR-3UTR GCA 90 bp | GAGCACAGGAAACTTTATTATAGTGATGAAATTGACAGTCCCCAGTTAATCTTCCTAGCTGAGCCCTTCTaGCTTTCATTCTTTGGACTC | + |
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Preference number: 2 (lower is better) Translates to: EHRKLYYSDEIDSPQLIFLAEPF*LSFFGL Trigger: GAGTCCAAAGAATGAAAGGCAGAAGGGCTCAGCTAG...GAAGATTAACTGGGGACTGTCAATTTCATCACTATAATAAAGTTTCCTGTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108150.2 ENSMUST00000108151.3 |
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| 3UTR-3UTR CAA 90 bp | GAGCACAGGAAACTTTATTATAGTGATGAAATTGACAGTCCCCAGTTAATCTTCTCTGCCTTTCATTCTTaGGACTCTTTGTCAAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: EHRKLYYSDEIDSPQLIFSAFHS*DSLSSQ Trigger: CTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGA...GAAGATTAACTGGGGACTGTCAATTTCATCACTATAATAAAGTTTCCTGTGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108150.2 ENSMUST00000108151.3 |
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| CDS-3UTR CCA 90 bp | TCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCCGCAGGCGGCAGCCGGCTaGGCGAGTGGCCACGCATGT | + |
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Preference number: 4 (lower is better) Translates to: SAFHSLDSLSSQRSYQHPQAAAG*ASGHAC Trigger: ACATGCGTGGCCACTCGCCCAGCCGGCTGCCGCCTG...CGGGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108150.2 ENSMUST00000108151.3 |
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| CDS-3UTR CCA 90 bp | CTTCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCAGCCGGCTGGGCGAGTaGCCACGCATGTGCGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LLPFILWTLCQAREATNTSRLGE*PRMCAC Trigger: GCAGGCGCACATGCGTGGCCACTCGCCCAGCCGGCT...GGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108150.2 ENSMUST00000108151.3 |
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| CDS-3UTR GCA 90 bp | TCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCCGCCACGCATGTGCGCCTaGATGGAGGCCAGGCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SAFHSLDSLSSQRSYQHPPRMCA*MEARLG Trigger: CCCTAGCCTGGCCTCCATGCAGGCGCACATGCGTGG...CGGGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108150.2 ENSMUST00000108151.3 |
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| CDS-3UTR TCA 90 bp | TCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCCGCCTGCCAGGCCGCAGTaGTGGGGGTACTATGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SAFHSLDSLSSQRSYQHPPARPQ*WGYYGR Trigger: TCTCCCATAGTACCCCCATCACTGCGGCCTGGCAGG...CGGGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR CCA 90 bp | CTTCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCGGAAGGTGGAGCGTATaGTCCATCCAGGCGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLPFILWTLCQAREATNTGRWSV*SIQAAA Trigger: GGCTGCCGCCTGGATGGACCATACGCTCCACCTTCC...GGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108150.2 ENSMUST00000108151.3 |
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| CDS-3UTR CCA 90 bp | CTTCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCCCTGCAGCCAAGCCTTaGGCTTGCACCTGCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: LLPFILWTLCQAREATNTPAAKP*ACTCQH Trigger: GTGCTGGCAGGTGCAAGCCCAAGGCTTGGCTGCAGG...GGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR TCA 90 bp | CTTCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCAAATCCCGGGAGCGCTaGGGACAGAGGCTACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLPFILWTLCQAREATNTKSRER*GQRLQE Trigger: CTCCTGTAGCCTCTGTCCTCAGCGCTCCCGGGATTT...GGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108150.2 ENSMUST00000108151.3 |
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| CDS-3UTR TCA 90 bp | CTTCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCCTATCTGCCAAGGGCTaGGGGTTTCAGTGCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLPFILWTLCQAREATNTLSAKG*GFQCPG Trigger: CCCAGGGCACTGAAACCCTCAGCCCTTGGCAGATAG...GGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR GCA 90 bp | TCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCCGCTGACTCACACAGGTTaGCAGTGTGCCTGTGAACCC | + |
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Preference number: 4 (lower is better) Translates to: SAFHSLDSLSSQRSYQHPLTHTG*QCACEP Trigger: GGGTTCACAGGCACACTGGCAACCTGTGTGAGTCAG...CGGGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR CCA 90 bp | GAGCACAGGAAACTTTATTATAGTGATGAAATTGACAGTCCCCAGTTAATCTTCCAGGCGGCAGCCGGCTaGGCGAGTGGCCACGCATGT | + |
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Preference number: 4 (lower is better) Translates to: EHRKLYYSDEIDSPQLIFQAAAG*ASGHAC Trigger: ACATGCGTGGCCACTCGCCCAGCCGGCTGCCGCCTG...GAAGATTAACTGGGGACTGTCAATTTCATCACTATAATAAAGTTTCCTGTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108150.2 ENSMUST00000108151.3 |
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| CDS-3UTR GCA 90 bp | CTTCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCCATCCTAGTTGCTCCTaGCATCTCAGGCCTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLPFILWTLCQAREATNTHPSCS*HLRPLS Trigger: GGAGAGAGGCCTGAGATGGCAGGAGCAACTAGGATG...GGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR GCA 90 bp | TCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCCGGTGCCTGTGAACCCTTaGCCAGACGTTTCTATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SAFHSLDSLSSQRSYQHPVPVNP*PDVSIC Trigger: GCAGATAGAAACGTCTGGGCAAGGGTTCACAGGCAC...CGGGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR GCA 90 bp | CTTCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCATGGGCAGTTCAGTGTaGGCTCCTGACTCACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLPFILWTLCQAREATNTMGSSV*APDSHR Trigger: CCTGTGTGAGTCAGGAGCGCACACTGAACTGCCCAT...GGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR CCA 90 bp | CTTCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCTCCTCAGAGCCCTTGTaGCTCTCGATACCTCGCATG | + |
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Preference number: 4 (lower is better) Translates to: LLPFILWTLCQAREATNTSSEPL*LSIPRM Trigger: CATGCGAGGTATCGAGAGCCACAAGGGCTCTGAGGA...GGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR TCA 90 bp | TCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCCGCCTCATGAAGTCTTCTaGTTGCTGGTGCCTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SAFHSLDSLSSQRSYQHPPHEVF*LLVPLQ Trigger: CTGAAGAGGCACCAGCAATCAGAAGACTTCATGAGG...CGGGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR TCA 90 bp | CTTCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCAAAGGAGGGTGTTGGTaGGATGGGCAGTTCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLPFILWTLCQAREATNTKGGCW*DGQFSV Trigger: CACACTGAACTGCCCATCTCACCAACACCCTCCTTT...GGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR GCA 90 bp | TCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCCGCCATGTGTCCTCAGGTaGTTGGTCATGGCAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SAFHSLDSLSSQRSYQHPPCVLR*LVMAEK Trigger: TTTCTCTGCCATGACCAAGCACCTGAGGACACATGG...CGGGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108150.2 ENSMUST00000108151.3 |
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| CDS-3UTR GCA 90 bp | GAGCACAGGAAACTTTATTATAGTGATGAAATTGACAGTCCCCAGTTAATCTTCCCACGCATGTGCGCCTaGATGGAGGCCAGGCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EHRKLYYSDEIDSPQLIFPRMCA*MEARLG Trigger: CCCTAGCCTGGCCTCCATGCAGGCGCACATGCGTGG...GAAGATTAACTGGGGACTGTCAATTTCATCACTATAATAAAGTTTCCTGTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108150.2 ENSMUST00000108151.3 |
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| CDS-3UTR GCA 90 bp | TCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCCGTCTTCTGATTGCTGGTaGCTCTTCAGTCCTGGATCC | + |
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Preference number: 4 (lower is better) Translates to: SAFHSLDSLSSQRSYQHPSSDCW*LFSPGS Trigger: GGATCCAGGACTGAAGAGGCACCAGCAATCAGAAGA...CGGGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR GCA 90 bp | CTTCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCGCTCATCATCCTAGTTaGTCCTGCCATCTCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLPFILWTLCQAREATNTAHHPS*SCHLRP Trigger: AGGCCTGAGATGGCAGGAGCAACTAGGATGATGAGC...GGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR GCA 90 bp | TCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCCGCCAGACGTTTCTATCTaGCAAGGGCTGAGGGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: SAFHSLDSLSSQRSYQHPPDVSI*QGLRVS Trigger: TGAAACCCTCAGCCCTTGGCAGATAGAAACGTCTGG...CGGGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR CCA 90 bp | CTTCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCGTGTCCTCAGGTGCTTaGTCATGGCAGAGAAATCCC | + |
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Preference number: 4 (lower is better) Translates to: LLPFILWTLCQAREATNTVSSGA*SWQRNP Trigger: GGGATTTCTCTGCCATGACCAAGCACCTGAGGACAC...GGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108150.2 ENSMUST00000108151.3 |
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| CDS-3UTR CCA 90 bp | TCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCCGAAGAGTAGAGGAAGGTaGAGCGTATGGTCCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: SAFHSLDSLSSQRSYQHPKSRGR*SVWSIQ Trigger: CTGGATGGACCATACGCTCCACCTTCCTCTACTCTT...CGGGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108150.2 ENSMUST00000108151.3 |
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| CDS-3UTR CCA 90 bp | CTTCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCGTGATGGGGGTACTATaGGAGAAGGGAGCACCGTAT | + |
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Preference number: 4 (lower is better) Translates to: LLPFILWTLCQAREATNTVMGVL*EKGAPY Trigger: ATACGGTGCTCCCTTCTCCCATAGTACCCCCATCAC...GGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR TCA 90 bp | TCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCCGACAAAGGTCAGAATCTaGGCAAAGGTGGAAGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SAFHSLDSLSSQRSYQHPTKVRI*AKVEGL Trigger: AAGCCCTTCCACCTTTGCTCAGATTCTGACCTTTGT...CGGGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR CCA 90 bp | GAGCACAGGAAACTTTATTATAGTGATGAAATTGACAGTCCCCAGTTAATCTTCGGAAGGTGGAGCGTATaGTCCATCCAGGCGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: EHRKLYYSDEIDSPQLIFGRWSV*SIQAAA Trigger: GGCTGCCGCCTGGATGGACCATACGCTCCACCTTCC...GAAGATTAACTGGGGACTGTCAATTTCATCACTATAATAAAGTTTCCTGTGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108150.2 ENSMUST00000108151.3 |
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| CDS-3UTR CCA 90 bp | CTTCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCGTGCCTCTTCAGTCCTaGATCCAGCTCATCTTCATC | + |
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Preference number: 4 (lower is better) Translates to: LLPFILWTLCQAREATNTVPLQS*IQLIFI Trigger: GATGAAGATGAGCTGGATCCAGGACTGAAGAGGCAC...GGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR TCA 90 bp | GAGCACAGGAAACTTTATTATAGTGATGAAATTGACAGTCCCCAGTTAATCTTCAAATCCCGGGAGCGCTaGGGACAGAGGCTACAGGAG | + |
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Preference number: 4 (lower is better) Translates to: EHRKLYYSDEIDSPQLIFKSRER*GQRLQE Trigger: CTCCTGTAGCCTCTGTCCTCAGCGCTCCCGGGATTT...GAAGATTAACTGGGGACTGTCAATTTCATCACTATAATAAAGTTTCCTGTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108150.2 ENSMUST00000108151.3 |
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| CDS-3UTR GCA 90 bp | CTTCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCGCTCATCTTCATCCTTaGCCTTTTGAGCTCTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: LLPFILWTLCQAREATNTAHLHP*PFELSD Trigger: GTCAGAGAGCTCAAAAGGGCAAGGATGAAGATGAGC...GGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR CCA 90 bp | GAGCACAGGAAACTTTATTATAGTGATGAAATTGACAGTCCCCAGTTAATCTTCGTACCCCCAAGGCTTTaGCTGCCTCTTCAAGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: EHRKLYYSDEIDSPQLIFVPPRL*LPLQGP Trigger: GGGACCTTGAAGAGGCAGCCAAAGCCTTGGGGGTAC...GAAGATTAACTGGGGACTGTCAATTTCATCACTATAATAAAGTTTCCTGTGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR CCA 90 bp | CTTCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCGAATCTGAGCAAAGGTaGAAGGGCTTATGTCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: LLPFILWTLCQAREATNTESEQR*KGLCLQ Trigger: TTGAAGACATAAGCCCTTCCACCTTTGCTCAGATTC...GGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR CCA 90 bp | GAGCACAGGAAACTTTATTATAGTGATGAAATTGACAGTCCCCAGTTAATCTTCAGGGTGTTGGTGAGATaGGCAGTTCAGTGTGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: EHRKLYYSDEIDSPQLIFRVLVR*AVQCAL Trigger: GAGCGCACACTGAACTGCCCATCTCACCAACACCCT...GAAGATTAACTGGGGACTGTCAATTTCATCACTATAATAAAGTTTCCTGTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR CCA 90 bp | GAGCACAGGAAACTTTATTATAGTGATGAAATTGACAGTCCCCAGTTAATCTTCGTGTCCTCAGGTGCTTaGTCATGGCAGAGAAATCCC | + |
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Preference number: 4 (lower is better) Translates to: EHRKLYYSDEIDSPQLIFVSSGA*SWQRNP Trigger: GGGATTTCTCTGCCATGACCAAGCACCTGAGGACAC...GAAGATTAACTGGGGACTGTCAATTTCATCACTATAATAAAGTTTCCTGTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108150.2 ENSMUST00000108151.3 |
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| CDS-3UTR TCA 90 bp | GAGCACAGGAAACTTTATTATAGTGATGAAATTGACAGTCCCCAGTTAATCTTCTCTCAGAGCCCCTCATaGAGTCTTCTGATTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: EHRKLYYSDEIDSPQLIFSQSPS*SLLIAG Trigger: ACCAGCAATCAGAAGACTTCATGAGGGGCTCTGAGA...GAAGATTAACTGGGGACTGTCAATTTCATCACTATAATAAAGTTTCCTGTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR CCA 90 bp | GAGCACAGGAAACTTTATTATAGTGATGAAATTGACAGTCCCCAGTTAATCTTCAAGAGTAGAGGAAGGTaGAGCGTATGGTCCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: EHRKLYYSDEIDSPQLIFKSRGR*SVWSIQ Trigger: CTGGATGGACCATACGCTCCACCTTCCTCTACTCTT...GAAGATTAACTGGGGACTGTCAATTTCATCACTATAATAAAGTTTCCTGTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108150.2 ENSMUST00000108151.3 |
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| CDS-3UTR CCA 90 bp | GAGCACAGGAAACTTTATTATAGTGATGAAATTGACAGTCCCCAGTTAATCTTCGACTCCAGAGAGCTTTaGAGTGGTTCAAGGTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: EHRKLYYSDEIDSPQLIFDSREL*SGSRSV Trigger: CACTGACCTTGAACCACTCCAAAGCTCTCTGGAGTC...GAAGATTAACTGGGGACTGTCAATTTCATCACTATAATAAAGTTTCCTGTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR TCA 90 bp | GAGCACAGGAAACTTTATTATAGTGATGAAATTGACAGTCCCCAGTTAATCTTCTGCTTTATGCTTGTGTaGCATCTCCTGTTCTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: EHRKLYYSDEIDSPQLIFCFMLV*HLLFSP Trigger: GGGAGAGAACAGGAGATGTCACACAAGCATAAAGCA...GAAGATTAACTGGGGACTGTCAATTTCATCACTATAATAAAGTTTCCTGTGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR TCA 90 bp | GAGCACAGGAAACTTTATTATAGTGATGAAATTGACAGTCCCCAGTTAATCTTCTCTCCATCTGATGCTTaGGTGAAAACCTCTTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: EHRKLYYSDEIDSPQLIFSPSDA*VKTSFH Trigger: GTGGAAAGAGGTTTTCACTCAAGCATCAGATGGAGA...GAAGATTAACTGGGGACTGTCAATTTCATCACTATAATAAAGTTTCCTGTGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR GCA 90 bp | GAGCACAGGAAACTTTATTATAGTGATGAAATTGACAGTCCCCAGTTAATCTTCATGAAGTCTTCTGATTaGTGGTGCCTCTTCAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: EHRKLYYSDEIDSPQLIFMKSSD*WCLFSP Trigger: AGGACTGAAGAGGCACCAGCAATCAGAAGACTTCAT...GAAGATTAACTGGGGACTGTCAATTTCATCACTATAATAAAGTTTCCTGTGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR CCA 90 bp | GAGCACAGGAAACTTTATTATAGTGATGAAATTGACAGTCCCCAGTTAATCTTCTCTAAAATCCTTCTCTaGCTTCTGTTTCTCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: EHRKLYYSDEIDSPQLIFSKILL*LLFLSR Trigger: CCTGGAGAGAAACAGAAGCCAGAGAAGGATTTTAGA...GAAGATTAACTGGGGACTGTCAATTTCATCACTATAATAAAGTTTCCTGTGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS CCA 90 bp | AGGCCCGGGTCGGCCTCGAGGAAGAGTAGAGGAAGGTGGAGCGTATaGTCCATCCAGGCGGCAGCCGGCTGGGCGAGTGGCCACGCATGT | + |
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Preference number: 5 (lower is better) Translates to: RPGSASRKSRGRWSV*SIQAAAGWASGHAC Trigger: ACATGCGTGGCCACTCGCCCAGCCGGCTGCCGCCTGGATGGACCATACGCTCCACCTTCCTCTACTCTTCCTCGAGGCCGACCCGGGCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108150.2 ENSMUST00000108151.3 |
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| CDS CCA 90 bp | GCACCGTATCTGGAGGGCCACAACAAGATGCTCCACAAGGCCGACTaGCCCTCCCCCAACCTAGGGACTTCAGCCCACCAGGGCCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: APYLEGHNKMLHKAD*PSPNLGTSAHQGLG Trigger: TCCCAGGCCCTGGTGGGCTGAAGTCCCTAGGTTGGGGGAGGGCCAGTCGGCCTTGTGGAGCATCTTGTTGTGGCCCTCCAGATACGGTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS GCA 90 bp | CAAAGGTGGAAGGGCTTATGTCTTCAACCAGAGCCCACCGGCCCCTaGAGCCAAGCCTTGGGCTTGCACCTGCCAGCACTAGGCTGTGAG | + |
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Preference number: 5 (lower is better) Translates to: QRWKGLCLQPEPTGP*SQALGLHLPALGCE Trigger: CTCACAGCCTAGTGCTGGCAGGTGCAAGCCCAAGGCTTGGCTGCAGGGGCCGGTGGGCTCTGGTTGAAGACATAAGCCCTTCCACCTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS TCA 90 bp | CTCCTCAGAGCCCTTGTGGCTCTCGATACCTCGCATGACCTCCTCTaGGCTCATCATCCTAGTTGCTCCTGCCATCTCAGGCCTCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: LLRALVALDTSHDLL*AHHPSCSCHLRPLS Trigger: GGAGAGAGGCCTGAGATGGCAGGAGCAACTAGGATGATGAGCTCAGAGGAGGTCATGCGAGGTATCGAGAGCCACAAGGGCTCTGAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS GCA 90 bp | CAGGTTGCCAGTGTGCCTGTGAACCCTTGCCCAGACGTTTCTATCTaGCAAGGGCTGAGGGTTTCAGTGCCCTGGGGAAAAGATCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: QVASVPVNPCPDVSI*QGLRVSVPWGKDPG Trigger: TCCAGGATCTTTTCCCCAGGGCACTGAAACCCTCAGCCCTTGGCAGATAGAAACGTCTGGGCAAGGGTTCACAGGCACACTGGCAACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR CAA 90 bp | CTTCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCCCCTGCAGCCAAGCCTaGGGCTTGCACCTGCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: LLPFILWTLCQAREATNTPCSQA*GLHLPA Trigger: TGCTGGCAGGTGCAAGCCCAAGGCTTGGCTGCAGGG...GGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS CCA 90 bp | GCTCTATACTCTCTCCATAGACAAAGGTCAGAATCTGAGCAAAGGTaGAAGGGCTTATGTCTTCAACCAGAGCCCACCGGCCCCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: ALYSLHRQRSESEQR*KGLCLQPEPTGPCS Trigger: GCTGCAGGGGCCGGTGGGCTCTGGTTGAAGACATAAGCCCTTCCACCTTTGCTCAGATTCTGACCTTTGTCTATGGAGAGAGTATAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR CAA 90 bp | TCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCCGTGTACCCCCAAGGCTTaGGCTGCCTCTTCAAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: SAFHSLDSLSSQRSYQHPCTPKA*AASSRS Trigger: GGACCTTGAAGAGGCAGCCAAAGCCTTGGGGGTACA...CGGGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR CAA 90 bp | TCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCCGTTCATCCTTGCCCTTTaGAGCTCTCTGACAGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: SAFHSLDSLSSQRSYQHPFILAL*SSLTGL Trigger: GAGGCCTGTCAGAGAGCTCAAAAGGGCAAGGATGAA...CGGGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR CAA 90 bp | TCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCCGTGTGCCTGTGAACCCTaGCCCAGACGTTTCTATCTG | + |
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Preference number: 5 (lower is better) Translates to: SAFHSLDSLSSQRSYQHPCACEP*PRRFYL Trigger: CAGATAGAAACGTCTGGGCAAGGGTTCACAGGCACA...CGGGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS-3UTR CAA 90 bp | CTTCTGCCTTTCATTCTTTGGACTCTTTGTCAAGCCAGAGAAGCTACCAACACCTGTGTCCTCAGGTGCTaGGTCATGGCAGAGAAATCC | + |
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Preference number: 5 (lower is better) Translates to: LLPFILWTLCQAREATNTCVLRC*VMAEKS Trigger: GGATTTCTCTGCCATGACCAAGCACCTGAGGACACA...GGTGTTGGTAGCTTCTCTGGCTTGACAAAGAGTCCAAAGAATGAAAGGCAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108150.2 ENSMUST00000108151.3 |
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| CDS GCA 72 bp | CCAGGCGGCAGCCGGCTGGGCGAGTGGCCACGCATGTaGGCCTGCATGGAGGCCAGGCTAGGGCAGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: PGGSRLGEWPRM*ACMEARLGQPA Trigger: GGCTGGCTGCCCTAGCCTGGCCTCCATGCAGGCGCACATGCGTGGCCACTCGCCCAGCCGGCTGCCGCCTGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108150.2 ENSMUST00000108151.3 |
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| CDS CCA 72 bp | CGTATGGTCCATCCAGGCGGCAGCCGGCTGGGCGAGTaGCCACGCATGTGCGCCTGCATGGAGGCCAGGCTA | + |
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Preference number: 6 (lower is better) Translates to: RMVHPGGSRLGE*PRMCACMEARL Trigger: TAGCCTGGCCTCCATGCAGGCGCACATGCGTGGCCACTCGCCCAGCCGGCTGCCGCCTGGATGGACCATACG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108150.2 ENSMUST00000108151.3 |
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| CDS CCA 72 bp | AGGTGGAGCGTATGGTCCATCCAGGCGGCAGCCGGCTaGGCGAGTGGCCACGCATGTGCGCCTGCATGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RWSVWSIQAAAG*ASGHACAPAWR Trigger: CCTCCATGCAGGCGCACATGCGTGGCCACTCGCCCAGCCGGCTGCCGCCTGGATGGACCATACGCTCCACCT 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108150.2 ENSMUST00000108151.3 |
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| CDS CAA 90 bp | TGTCTTCAACCAGAGCCCACCGGCCCCTGCAGCCAAGCCTTGGGCTaGCACCTGCCAGCACTAGGCTGTGAGCCGGGAACTCCAGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: CLQPEPTGPCSQALG*HLPALGCEPGTPGP Trigger: GGGGCCTGGAGTTCCCGGCTCACAGCCTAGTGCTGGCAGGTGCAAGCCCAAGGCTTGGCTGCAGGGGCCGGTGGGCTCTGGTTGAAGACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS CCA 72 bp | CTGGAGGGCCACAACAAGATGCTCCACAAGGCCGACTaGCCCTCCCCCAACCTAGGGACTTCAGCCCACCAG | + |
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Preference number: 6 (lower is better) Translates to: LEGHNKMLHKAD*PSPNLGTSAHQ Trigger: CTGGTGGGCTGAAGTCCCTAGGTTGGGGGAGGGCCAGTCGGCCTTGTGGAGCATCTTGTTGTGGCCCTCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS CAA 90 bp | GGCTTATGTCTTCAACCAGAGCCCACCGGCCCCTGCAGCCAAGCCTaGGGCTTGCACCTGCCAGCACTAGGCTGTGAGCCGGGAACTCCA | + |
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Preference number: 6 (lower is better) Translates to: GLCLQPEPTGPCSQA*GLHLPALGCEPGTP Trigger: TGGAGTTCCCGGCTCACAGCCTAGTGCTGGCAGGTGCAAGCCCAAGGCTTGGCTGCAGGGGCCGGTGGGCTCTGGTTGAAGACATAAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS TCA 72 bp | TCCTCTGATCTTGAGGCCGGACCTGCCAGGCCGCAGTaGTGGGGGTACTATGGGAGAAGGGAGCACCGTATC | + |
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Preference number: 6 (lower is better) Translates to: SSDLEAGPARPQ*WGYYGRREHRI Trigger: GATACGGTGCTCCCTTCTCCCATAGTACCCCCATCACTGCGGCCTGGCAGGTCCGGCCTCAAGATCAGAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS GCA 72 bp | AAGGGCTTATGTCTTCAACCAGAGCCCACCGGCCCCTaGAGCCAAGCCTTGGGCTTGCACCTGCCAGCACTA | + |
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Preference number: 6 (lower is better) Translates to: KGLCLQPEPTGP*SQALGLHLPAL Trigger: TAGTGCTGGCAGGTGCAAGCCCAAGGCTTGGCTGCAGGGGCCGGTGGGCTCTGGTTGAAGACATAAGCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS CAA 72 bp | TTTGGAGTGGTTCAAGGTCAGTGGGATCCTCTGATCTaGAGGCCGGACCTGCCAGGCCGCAGTGATGGGGGT | + |
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Preference number: 6 (lower is better) Translates to: FGVVQGQWDPLI*RPDLPGRSDGG Trigger: ACCCCCATCACTGCGGCCTGGCAGGTCCGGCCTCAAGATCAGAGGATCCCACTGACCTTGAACCACTCCAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS CAA 90 bp | CCAGAGAGCTTTGGAGTGGTTCAAGGTCAGTGGGATCCTCTGATCTaGAGGCCGGACCTGCCAGGCCGCAGTGATGGGGGTACTATGGGA | + |
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Preference number: 6 (lower is better) Translates to: PESFGVVQGQWDPLI*RPDLPGRSDGGTMG Trigger: TCCCATAGTACCCCCATCACTGCGGCCTGGCAGGTCCGGCCTCAAGATCAGAGGATCCCACTGACCTTGAACCACTCCAAAGCTCTCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS TCA 72 bp | TGCGCTCCTGACTCACACAGGTTGCCAGTGTGCCTGTaGACCCTTGCCCAGACGTTTCTATCTGCCAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: CAPDSHRLPVCL*TLAQTFLSAKG Trigger: GCCCTTGGCAGATAGAAACGTCTGGGCAAGGGTTCACAGGCACACTGGCAACCTGTGTGAGTCAGGAGCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS GCA 72 bp | TGGGCAGTTCAGTGTGCGCTCCTGACTCACACAGGTTaGCAGTGTGCCTGTGAACCCTTGCCCAGACGTTTC | + |
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Preference number: 6 (lower is better) Translates to: WAVQCALLTHTG*QCACEPLPRRF Trigger: GAAACGTCTGGGCAAGGGTTCACAGGCACACTGGCAACCTGTGTGAGTCAGGAGCGCACACTGAACTGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS GCA 72 bp | GTAAAGGAGGGTGTTGGTGAGATGGGCAGTTCAGTGTaGGCTCCTGACTCACACAGGTTGCCAGTGTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: VKEGVGEMGSSV*APDSHRLPVCL Trigger: CAGGCACACTGGCAACCTGTGTGAGTCAGGAGCGCACACTGAACTGCCCATCTCACCAACACCCTCCTTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS CCA 72 bp | GTTTCTATCTGCCAAGGGCTGAGGGTTTCAGTGCCCTaGGGAAAAGATCCTGGAGTGGGGCTAGAGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: VSICQGLRVSVP*GKDPGVGLEEA Trigger: GGCTTCCTCTAGCCCCACTCCAGGATCTTTTCCCCAGGGCACTGAAACCCTCAGCCCTTGGCAGATAGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS CAA 72 bp | CTGACTCACACAGGTTGCCAGTGTGCCTGTGAACCCTaGCCCAGACGTTTCTATCTGCCAAGGGCTGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: LTHTGCQCACEP*PRRFYLPRAEG Trigger: ACCCTCAGCCCTTGGCAGATAGAAACGTCTGGGCAAGGGTTCACAGGCACACTGGCAACCTGTGTGAGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS TCA 72 bp | CCCAAGTCCTCTCTCAGAGCCCCTCATGAAGTCTTCTaGTTGCTGGTGCCTCTTCAGTCCTGGATCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: PKSSLRAPHEVF*LLVPLQSWIQL Trigger: GAGCTGGATCCAGGACTGAAGAGGCACCAGCAATCAGAAGACTTCATGAGGGGCTCTGAGAGAGGACTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS GCA 72 bp | AGTGTGCCTGTGAACCCTTGCCCAGACGTTTCTATCTaGCAAGGGCTGAGGGTTTCAGTGCCCTGGGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: SVPVNPCPDVSI*QGLRVSVPWGK Trigger: TTTTCCCCAGGGCACTGAAACCCTCAGCCCTTGGCAGATAGAAACGTCTGGGCAAGGGTTCACAGGCACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS GCA 72 bp | GCCTCTTCAGTCCTGGATCCAGCTCATCTTCATCCTTaGCCTTTTGAGCTCTCTGACAGGCCTCTTCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: ASSVLDPAHLHP*PFELSDRPLPR Trigger: CCTTGGAAGAGGCCTGTCAGAGAGCTCAAAAGGGCAAGGATGAAGATGAGCTGGATCCAGGACTGAAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS GCA 72 bp | CTCTCAGAGCCCCTCATGAAGTCTTCTGATTGCTGGTaGCTCTTCAGTCCTGGATCCAGCTCATCTTCATCC | + |
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Preference number: 6 (lower is better) Translates to: LSEPLMKSSDCW*LFSPGSSSSSS Trigger: GGATGAAGATGAGCTGGATCCAGGACTGAAGAGGCACCAGCAATCAGAAGACTTCATGAGGGGCTCTGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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| CDS GCA 72 bp | AGTCCTCTCTCAGAGCCCCTCATGAAGTCTTCTGATTaGTGGTGCCTCTTCAGTCCTGGATCCAGCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: SPLSEPLMKSSD*WCLFSPGSSSS Trigger: AGATGAGCTGGATCCAGGACTGAAGAGGCACCAGCAATCAGAAGACTTCATGAGGGGCTCTGAGAGAGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108151.3 |
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