Pregenerated sensors for ZBTB3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071661Ensembl transcript IDs: ENSMUST00000172175.3
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAACTGGCTGACTTGCTCTGCCCTATAACATCCTGTTTATCTGGCTaGGCAAAGAAAAGGGTAGACAGCTTCGGGTTGGGAAGAACCTTC | + |
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Preference number: 1 (lower is better) Translates to: ELADLLCPITSCLSG*AKKRVDSFGLGRTF Trigger: GAAGGTTCTTCCCAACCCGAAGCTGTCTACCCTTTTCTTTGCCCAGCCAGATAAACAGGATGTTATAGGGCAGAGCAAGTCAGCCAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| 3UTR-3UTR GCA 90 bp | GAACTGGCTGACTTGCTCTGCCCTATAACATCCTGTTTATCTGGCTGGGCAAAGGAAGAACCTTCATTCTaGCACCCTGGAGTGATGAGG | + |
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Preference number: 2 (lower is better) Translates to: ELADLLCPITSCLSGWAKEEPSF*HPGVMR Trigger: CCTCATCACTCCAGGGTGGCAGAATGAAGGTTCTTC...CTTTGCCCAGCCAGATAAACAGGATGTTATAGGGCAGAGCAAGTCAGCCAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| 3UTR-3UTR CCA 90 bp | CTAGTTTTATGTTCCAGAATGTGGAATGAGCAGTTACACCTCAGGAAAATTCTCAACATCCTGTTTATCTaGCTGGGCAAAGAAAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: LVLCSRMWNEQLHLRKILNILFI*LGKEKG Trigger: ACCCTTTTCTTTGCCCAGCCAGATAAACAGGATGTT...GAGAATTTTCCTGAGGTGTAACTGCTCATTCCACATTCTGGAACATAAAACTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| 3UTR GCA 72 bp | ATTCTCAGTGCCCTTGGAGAACTGGCTGACTTGCTCTaGCCTATAACATCCTGTTTATCTGGCTGGGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: ILSALGELADLL*PITSCLSGWAK Trigger: CTTTGCCCAGCCAGATAAACAGGATGTTATAGGGCAGAGCAAGTCAGCCAGTTCTCCAAGGGCACTGAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR TCA 90 bp | GGTGCTTCCAGCCTTCTCTGTAGCCATCTAGCAATGGTAAGAGCAGGCCTGGCAGCCAGGTCCTCATTGTaGGCCTTGCGGATGTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: GASSLLCSHLAMVRAGLAARSSL*ALRMWR Trigger: CCGCCACATCCGCAAGGCTCACAATGAGGACCTGGC...TGCCAGGCCTGCTCTTACCATTGCTAGATGGCTACAGAGAAGGCTGGAAGCACC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR GCA 90 bp | GGGTTGGGAAGAACCTTCATTCTGCCACCCTGGAGTGATGAGGTGCTTCCAGCCGGCCGCTCACGTGTGTaGACTGTGGCATGTCGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GLGRTFILPPWSDEVLPAGRSRV*TVACRL Trigger: AAGGCGACATGCCACAGTGCACACACGTGAGCGGCC...GGCTGGAAGCACCTCATCACTCCAGGGTGGCAGAATGAAGGTTCTTCCCAACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CCA 90 bp | GGGTTGGGAAGAACCTTCATTCTGCCACCCTGGAGTGATGAGGTGCTTCCAGCCGGAGACATCAGCCACTaGTGGAGGAGGTGCCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: GLGRTFILPPWSDEVLPAGDISH*WRRCPK Trigger: CTTCGGGCACCTCCTCCACCAGTGGCTGATGTCTCC...GGCTGGAAGCACCTCATCACTCCAGGGTGGCAGAATGAAGGTTCTTCCCAACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR GCA 90 bp | GGTTGGGAAGAACCTTCATTCTGCCACCCTGGAGTGATGAGGTGCTTCCAGCCTCCTCATTGTGAGCCTTaGGGATGTGGCGGTAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: GWEEPSFCHPGVMRCFQPPHCEP*GCGGRG Trigger: ACCTCTACCGCCACATCCGCAAGGCTCACAATGAGG...AGGCTGGAAGCACCTCATCACTCCAGGGTGGCAGAATGAAGGTTCTTCCCAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CCA 90 bp | AGAACCTTCATTCTGCCACCCTGGAGTGATGAGGTGCTTCCAGCCTTCTCTGTAGGGTGGGGCTGGAGCTaGGGGATAGAAGCCTTGCAA | + |
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Preference number: 4 (lower is better) Translates to: RTFILPPWSDEVLPAFSVGWGWS*GIEALQ Trigger: TTGCAAGGCTTCTATCCCCCAGCTCCAGCCCCACCC...TACAGAGAAGGCTGGAAGCACCTCATCACTCCAGGGTGGCAGAATGAAGGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR GCA 90 bp | CTGTTTATCTGGCTGGGCAAAGAAAAGGGTAGACAGCTTCGGGTTGGGAAGAACGGTACTGTCTGCCTCTaGCAGAGCTCGGGCCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: LFIWLGKEKGRQLRVGKNGTVCL*QSSGLQ Trigger: TTGCAGGCCCGAGCTCTGGCAGAGGCAGACAGTACC...GTTCTTCCCAACCCGAAGCTGTCTACCCTTTTCTTTGCCCAGCCAGATAAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR GCA 90 bp | ACCTTCATTCTGCCACCCTGGAGTGATGAGGTGCTTCCAGCCTTCTCTGTAGCCGTGGGCCTCGAGAACTaGCTGACAAAAACTCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: TFILPPWSDEVLPAFSVAVGLEN*LTKTPD Trigger: GTCTGGAGTTTTTGTCAGGCAGTTCTCGAGGCCCAC...GGCTACAGAGAAGGCTGGAAGCACCTCATCACTCCAGGGTGGCAGAATGAAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CCA 90 bp | GGTGCTTCCAGCCTTCTCTGTAGCCATCTAGCAATGGTAAGAGCAGGCCTGGCACTGGTTTGCTGCGTTTaGCCAGGTCCTCATTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: GASSLLCSHLAMVRAGLALVCCV*PGPHCE Trigger: CTCACAATGAGGACCTGGCCAAACGCAGCAAACCAG...TGCCAGGCCTGCTCTTACCATTGCTAGATGGCTACAGAGAAGGCTGGAAGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR TCA 90 bp | GGTTGGGAAGAACCTTCATTCTGCCACCCTGGAGTGATGAGGTGCTTCCAGCCTCAAAGGCTGGGGCCGTaGCAATCTCATTGTGAATAC | + |
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Preference number: 4 (lower is better) Translates to: GWEEPSFCHPGVMRCFQPQRLGP*QSHCEY Trigger: GTATTCACAATGAGATTGTCACGGCCCCAGCCTTTG...AGGCTGGAAGCACCTCATCACTCCAGGGTGGCAGAATGAAGGTTCTTCCCAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR GCA 90 bp | TTATCTGGCTGGGCAAAGAAAAGGGTAGACAGCTTCGGGTTGGGAAGAACCTTCCTGTCCCCCATACACTaGTCCTCCAGGTGGGAACAG | + |
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Preference number: 4 (lower is better) Translates to: LSGWAKKRVDSFGLGRTFLSPIH*SSRWEQ Trigger: CTGTTCCCACCTGGAGGAGCAGTGTATGGGGGACAG...GAAGGTTCTTCCCAACCCGAAGCTGTCTACCCTTTTCTTTGCCCAGCCAGATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CCA 90 bp | GAACTGGCTGACTTGCTCTGCCCTATAACATCCTGTTTATCTGGCTGGGCAAAGTCACAAAGGAAACCCTaGGACCGTTGCTCCCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ELADLLCPITSCLSGWAKSQRKP*DRCSRR Trigger: CCTGCGGGAGCAACGGTCCCAGGGTTTCCTTTGTGA...CTTTGCCCAGCCAGATAAACAGGATGTTATAGGGCAGAGCAAGTCAGCCAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CCA 90 bp | GACAGCTTCGGGTTGGGAAGAACCTTCATTCTGCCACCCTGGAGTGATGAGGTGCGATGGGCCAAGAACTaGGTACTACCAACCATCACA | + |
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Preference number: 4 (lower is better) Translates to: DSFGLGRTFILPPWSDEVRWAKN*VLPTIT Trigger: TGTGATGGTTGGTAGTACCCAGTTCTTGGCCCATCG...CACCTCATCACTCCAGGGTGGCAGAATGAAGGTTCTTCCCAACCCGAAGCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CCA 90 bp | TGGGAAGAACCTTCATTCTGCCACCCTGGAGTGATGAGGTGCTTCCAGCCTTCTGAAAAGCTGAAAGAATaGGCTGCAGGAGGCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: WEEPSFCHPGVMRCFQPSEKLKE*AAGGQH Trigger: GTGCTGGCCTCCTGCAGCCCATTCTTTCAGCTTTTC...AGAAGGCTGGAAGCACCTCATCACTCCAGGGTGGCAGAATGAAGGTTCTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CCA 90 bp | GGTTGGGAAGAACCTTCATTCTGCCACCCTGGAGTGATGAGGTGCTTCCAGCCTTCATGTGCAAGTAGCTaGCAGCTGCCAGCACATCTT | + |
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Preference number: 4 (lower is better) Translates to: GWEEPSFCHPGVMRCFQPSCASS*QLPAHL Trigger: AAGATGTGCTGGCAGCTGCCAGCTACTTGCACATGA...AGGCTGGAAGCACCTCATCACTCCAGGGTGGCAGAATGAAGGTTCTTCCCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CCA 90 bp | GGTTGGGAAGAACCTTCATTCTGCCACCCTGGAGTGATGAGGTGCTTCCAGCCTCACGTGTGTGCACTGTaGCATGTCGCCTTAGTGTAT | + |
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Preference number: 4 (lower is better) Translates to: GWEEPSFCHPGVMRCFQPHVCAL*HVALVY Trigger: ATACACTAAGGCGACATGCCACAGTGCACACACGTG...AGGCTGGAAGCACCTCATCACTCCAGGGTGGCAGAATGAAGGTTCTTCCCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| 3UTR CAA 72 bp | TCTGGCTGGGCAAAGAAAAGGGTAGACAGCTTCGGGTaGGGAAGAACCTTCATTCTGCCACCCTGGAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: SGWAKKRVDSFG*GRTFILPPWSD Trigger: ATCACTCCAGGGTGGCAGAATGAAGGTTCTTCCCAACCCGAAGCTGTCTACCCTTTTCTTTGCCCAGCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR GCA 90 bp | TTTATCTGGCTGGGCAAAGAAAAGGGTAGACAGCTTCGGGTTGGGAAGAACCTTCTTCTTGGTACTGTCTaGCTCTGCCAGAGCTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: FIWLGKEKGRQLRVGKNLLLGTV*LCQSSG Trigger: GCCCGAGCTCTGGCAGAGGCAGACAGTACCAAGAAG...AAGGTTCTTCCCAACCCGAAGCTGTCTACCCTTTTCTTTGCCCAGCCAGATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CCA 90 bp | CTGTTTATCTGGCTGGGCAAAGAAAAGGGTAGACAGCTTCGGGTTGGGAAGAACCCCCTAAGGGCCAGCTaGCCAGCATACATAAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: LFIWLGKEKGRQLRVGKNPLRAS*PAYIKS Trigger: GGACTTTATGTATGCTGGCCAGCTGGCCCTTAGGGG...GTTCTTCCCAACCCGAAGCTGTCTACCCTTTTCTTTGCCCAGCCAGATAAACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CCA 90 bp | TCGGGTTGGGAAGAACCTTCATTCTGCCACCCTGGAGTGATGAGGTGCTTCCAGATAGAAGCCTTGCAATaGTCCTCCAGTATCCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SGWEEPSFCHPGVMRCFQIEALQ*SSSIPW Trigger: CCAAGGGATACTGGAGGACCATTGCAAGGCTTCTAT...CTGGAAGCACCTCATCACTCCAGGGTGGCAGAATGAAGGTTCTTCCCAACCCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CCA 90 bp | ATCCTGTTTATCTGGCTGGGCAAAGAAAAGGGTAGACAGCTTCGGGTTGGGAAGCTCTGTAGAGCTACTTaGGCTGGCAAGAGAGACGGA | + |
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Preference number: 4 (lower is better) Translates to: ILFIWLGKEKGRQLRVGKLCRAT*AGKRDG Trigger: TCCGTCTCTCTTGCCAGCCCAAGTAGCTCTACAGAG...CTTCCCAACCCGAAGCTGTCTACCCTTTTCTTTGCCCAGCCAGATAAACAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CCA 90 bp | GGGTTGGGAAGAACCTTCATTCTGCCACCCTGGAGTGATGAGGTGCTTCCAGCCGCTTCTACTTTTACCTaGACCAGTTCAGCTTCAACT | + |
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Preference number: 4 (lower is better) Translates to: GLGRTFILPPWSDEVLPAASTFT*TSSAST Trigger: AGTTGAAGCTGAACTGGTCCAGGTAAAAGTAGAAGC...GGCTGGAAGCACCTCATCACTCCAGGGTGGCAGAATGAAGGTTCTTCCCAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CCA 90 bp | TGGGAAGAACCTTCATTCTGCCACCCTGGAGTGATGAGGTGCTTCCAGCCTTCTAATGGTGCTAGCCTCTaGATCTGGTTTGCTGCGTTT | + |
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Preference number: 4 (lower is better) Translates to: WEEPSFCHPGVMRCFQPSNGASL*IWFAAF Trigger: AAACGCAGCAAACCAGATCCAGAGGCTAGCACCATT...AGAAGGCTGGAAGCACCTCATCACTCCAGGGTGGCAGAATGAAGGTTCTTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR TCA 90 bp | ATCCTGTTTATCTGGCTGGGCAAAGAAAAGGGTAGACAGCTTCGGGTTGGGAAGAGATGGTATGGTAGATaGGATTCCGGAGGCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: ILFIWLGKEKGRQLRVGKRWYGR*DSGGRK Trigger: CTTCCTGCCTCCGGAATCTCATCTACCATACCATCT...CTTCCCAACCCGAAGCTGTCTACCCTTTTCTTTGCCCAGCCAGATAAACAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| 3UTR CAA 72 bp | AGGAAAATTCTCAGTGCCCTTGGAGAACTGGCTGACTaGCTCTGCCCTATAACATCCTGTTTATCTGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RKILSALGELAD*LCPITSCLSGW Trigger: CCAGCCAGATAAACAGGATGTTATAGGGCAGAGCAAGTCAGCCAGTTCTCCAAGGGCACTGAGAATTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR TCA 90 bp | GCTGACTTGCTCTGCCCTATAACATCCTGTTTATCTGGCTGGGCAAAGAAAAGGGTGACAATCTCATTGTaGATACACACCAGGTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: ADLLCPITSCLSGWAKKRVTISL*IHTRSL Trigger: GAGGGACCTGGTGTGTATTCACAATGAGATTGTCAC...CCTTTTCTTTGCCCAGCCAGATAAACAGGATGTTATAGGGCAGAGCAAGTCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR GCA 90 bp | ATCCTGTTTATCTGGCTGGGCAAAGAAAAGGGTAGACAGCTTCGGGTTGGGAAGTACCAACCATCACAGTaGAGTCACAAAGGAAACCCT | + |
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Preference number: 4 (lower is better) Translates to: ILFIWLGKEKGRQLRVGKYQPSQ*SHKGNP Trigger: AGGGTTTCCTTTGTGACTGCACTGTGATGGTTGGTA...CTTCCCAACCCGAAGCTGTCTACCCTTTTCTTTGCCCAGCCAGATAAACAGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR GCA 90 bp | GCTGACTTGCTCTGCCCTATAACATCCTGTTTATCTGGCTGGGCAAAGAAAAGGTCTTTCCACAAGTCTTaGAGGTGGGAACATCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: ADLLCPITSCLSGWAKKRSFHKS*RWEHPL Trigger: CAGAGGATGTTCCCACCTGCAAGACTTGTGGAAAGA...CCTTTTCTTTGCCCAGCCAGATAAACAGGATGTTATAGGGCAGAGCAAGTCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CCA 90 bp | CTAGTTTTATGTTCCAGAATGTGGAATGAGCAGTTACACCTCAGGAAAATTCTCGCCAGCACAGCCCGATaGGCCAAGAACTGGGTACTA | + |
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Preference number: 4 (lower is better) Translates to: LVLCSRMWNEQLHLRKILASTAR*AKNWVL Trigger: TAGTACCCAGTTCTTGGCCCATCGGGCTGTGCTGGC...GAGAATTTTCCTGAGGTGTAACTGCTCATTCCACATTCTGGAACATAAAACTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CCA 90 bp | CTAGTTTTATGTTCCAGAATGTGGAATGAGCAGTTACACCTCAGGAAAATTCTCGACATCAGCCACTGGTaGAGGAGGTGCCCGAAGATG | + |
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Preference number: 4 (lower is better) Translates to: LVLCSRMWNEQLHLRKILDISHW*RRCPKM Trigger: CATCTTCGGGCACCTCCTCCACCAGTGGCTGATGTC...GAGAATTTTCCTGAGGTGTAACTGCTCATTCCACATTCTGGAACATAAAACTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CCA 90 bp | CTAGTTTTATGTTCCAGAATGTGGAATGAGCAGTTACACCTCAGGAAAATTCTCGCTAGCCTCTGGATCTaGTTTGCTGCGTTTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LVLCSRMWNEQLHLRKILASLWI*FAAFGQ Trigger: CTGGCCAAACGCAGCAAACCAGATCCAGAGGCTAGC...GAGAATTTTCCTGAGGTGTAACTGCTCATTCCACATTCTGGAACATAAAACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR GCA 90 bp | TTTATCTGGCTGGGCAAAGAAAAGGGTAGACAGCTTCGGGTTGGGAAGAACCTTATTTTTAGGACCAAGTaGAAATTCTTTGGGTGGACC | + |
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Preference number: 4 (lower is better) Translates to: FIWLGKEKGRQLRVGKNLIFRTK*KFFGWT Trigger: GGTCCACCCAAAGAATTTGCACTTGGTCCTAAAAAT...AAGGTTCTTCCCAACCCGAAGCTGTCTACCCTTTTCTTTGCCCAGCCAGATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CCA 90 bp | TCAGTGCTAGTTTTATGTTCCAGAATGTGGAATGAGCAGTTACACCTCAGGAAACAAGTGCAAATTCTTTaGGTGGACCTCCACCACCAC | + |
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Preference number: 4 (lower is better) Translates to: SVLVLCSRMWNEQLHLRKQVQIL*VDLHHH Trigger: GTGGTGGTGGAGGTCCACCCAAAGAATTTGCACTTG...TTTCCTGAGGTGTAACTGCTCATTCCACATTCTGGAACATAAAACTAGCACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CCA 90 bp | CTAGTTTTATGTTCCAGAATGTGGAATGAGCAGTTACACCTCAGGAAAATTCTCTGCAAATTCTTTGGGTaGACCTCCACCACCACTGCT | + |
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Preference number: 4 (lower is better) Translates to: LVLCSRMWNEQLHLRKILCKFFG*TSTTTA Trigger: AGCAGTGGTGGTGGAGGTCCACCCAAAGAATTTGCA...GAGAATTTTCCTGAGGTGTAACTGCTCATTCCACATTCTGGAACATAAAACTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS GCA 90 bp | CCACCACTGCTATGTCTCTCTGTCGTTTGGGAGCCAGAGAGGGGCTaGACCCCTAGAATGGTGCTAGCCTCTGGATCTGGTTTGCTGCGT | + |
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Preference number: 5 (lower is better) Translates to: PPLLCLSVVWEPERG*TPRMVLASGSGLLR Trigger: ACGCAGCAAACCAGATCCAGAGGCTAGCACCATTCTAGGGGTGCAGCCCCTCTCTGGCTCCCAAACGACAGAGAGACATAGCAGTGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CAA 90 bp | AAAAGGGTAGACAGCTTCGGGTTGGGAAGAACCTTCATTCTGCCACCCTGGAGTGAAACCCTGGGACCGTaGCTCCCGCAGGCTCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: KRVDSFGLGRTFILPPWSETLGP*LPQALK Trigger: CTTCAGAGCCTGCGGGAGCAACGGTCCCAGGGTTTC...ACTCCAGGGTGGCAGAATGAAGGTTCTTCCCAACCCGAAGCTGTCTACCCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CAA 90 bp | TCGGGTTGGGAAGAACCTTCATTCTGCCACCCTGGAGTGATGAGGTGCTTCCAGATGTCTCTCTGTCGTTaGGGAGCCAGAGAGGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: SGWEEPSFCHPGVMRCFQMSLCR*GAREGL Trigger: CAGCCCCTCTCTGGCTCCCAAACGACAGAGAGACAT...CTGGAAGCACCTCATCACTCCAGGGTGGCAGAATGAAGGTTCTTCCCAACCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS CCA 90 bp | CAGATACTGGTGGCTCATCTGCAGGATGAGCAATGGGTAAGGGAGTaGCTGGACCCTTCCATTCCTCTTTGTTCCAGCGGGCTGACGGTT | + |
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Preference number: 5 (lower is better) Translates to: QILVAHLQDEQWVRE*LDPSIPLCSSGLTV Trigger: AACCGTCAGCCCGCTGGAACAAAGAGGAATGGAAGGGTCCAGCCACTCCCTTACCCATTGCTCATCCTGCAGATGAGCCACCAGTATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CAA 90 bp | TTCATTCTGCCACCCTGGAGTGATGAGGTGCTTCCAGCCTTCTCTGTAGCCATCCCTCCTCTAGTCCTGTaGCCCCTGGCTCCTCAAAAG | + |
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Preference number: 5 (lower is better) Translates to: FILPPWSDEVLPAFSVAIPPLVL*PLAPQK Trigger: CTTTTGAGGAGCCAGGGGCAACAGGACTAGAGGAGG...GATGGCTACAGAGAAGGCTGGAAGCACCTCATCACTCCAGGGTGGCAGAATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS GCA 90 bp | GCAGGTGGGAACATCCTCTGTAAAATTTCCAAAGCTCCCTTGGGCTaGTTCATACTCAGGAGGAGGGTAGAGTGGTTCATGCAGGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: AGGNILCKISKAPLG*FILRRRVEWFMQGC Trigger: GCAGCCCTGCATGAACCACTCTACCCTCCTCCTGAGTATGAAGCAGCCCAAGGGAGCTTTGGAAATTTTACAGAGGATGTTCCCACCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS CCA 90 bp | GCCAGAAGAGAAGTAGTTTACAGGAATGGTCTCTGTAGAGCTACTTaGGCTGGCAAGAGAGACGGAGACATCAGCCACTGGTGGAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: ARREVVYRNGLCRAT*AGKRDGDISHWWRR Trigger: CCTCCTCCACCAGTGGCTGATGTCTCCGTCTCTCTTGCCAGCCCAAGTAGCTCTACAGAGACCATTCCTGTAAACTACTTCTCTTCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CAA 90 bp | GCTGACTTGCTCTGCCCTATAACATCCTGTTTATCTGGCTGGGCAAAGAAAAGGGCAGGAAGTGGTCACTaGGCCCCACCTCCTCTAGTC | + |
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Preference number: 5 (lower is better) Translates to: ADLLCPITSCLSGWAKKRAGSGH*APPPLV Trigger: GACTAGAGGAGGTGGGGCCAAGTGACCACTTCCTGC...CCTTTTCTTTGCCCAGCCAGATAAACAGGATGTTATAGGGCAGAGCAAGTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS GCA 90 bp | CTCCAGACTAGCAGGATTGGTTTCCTCTTCCTTCTTGGTACTGTCTaGCTCTGCCAGAGCTCGGGCCTGCAATCGTTGCTTACAAACCTT | + |
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Preference number: 5 (lower is better) Translates to: LQTSRIGFLFLLGTV*LCQSSGLQSLLTNL Trigger: AAGGTTTGTAAGCAACGATTGCAGGCCCGAGCTCTGGCAGAGGCAGACAGTACCAAGAAGGAAGAGGAAACCAATCCTGCTAGTCTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS CCA 90 bp | GGCCAGCTGGCCAGCATACATAAAGTCCAAAAGCAACCCAAAGGCTaGGGCCGTGACAATCTCATTGTGAATACACACCAGGTCCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: GQLASIHKVQKQPKG*GRDNLIVNTHQVPL Trigger: AAGAGGGACCTGGTGTGTATTCACAATGAGATTGTCACGGCCCCAGCCTTTGGGTTGCTTTTGGACTTTATGTATGCTGGCCAGCTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CAA 90 bp | TCGGGTTGGGAAGAACCTTCATTCTGCCACCCTGGAGTGATGAGGTGCTTCCAGTCCAGACTAGCAGGATaGGTTTCCTCTTCCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: SGWEEPSFCHPGVMRCFQSRLAG*VSSSFL Trigger: CAAGAAGGAAGAGGAAACCAATCCTGCTAGTCTGGA...CTGGAAGCACCTCATCACTCCAGGGTGGCAGAATGAAGGTTCTTCCCAACCCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS TCA 90 bp | TCCTCCAGGTGGGAACAGCCCTTCAGATCTGTGGGGCTGTTCCTCTaGCAAGTCAGCCTCCTCATCAGAGATCACAATAGCTTCTACTTT | + |
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Preference number: 5 (lower is better) Translates to: SSRWEQPFRSVGLFL*QVSLLIRDHNSFYF Trigger: AAAGTAGAAGCTATTGTGATCTCTGATGAGGAGGCTGACTTGTCAGAGGAACAGCCCCACAGATCTGAAGGGCTGTTCCCACCTGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS CCA 90 bp | CTCAGGAACCACATCAAGAGGAGTCAAGGGCTCCACCGAAACTCCTaGAAGGCCAGAAGAGAAGTAGTTTACAGGAATGGTCTCTGTAGA | + |
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Preference number: 5 (lower is better) Translates to: LRNHIKRSQGLHRNS*KARREVVYRNGLCR Trigger: TCTACAGAGACCATTCCTGTAAACTACTTCTCTTCTGGCCTTCCAGGAGTTTCGGTGGAGCCCTTGACTCCTCTTGATGTGGTTCCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CAA 90 bp | TCAGTGCTAGTTTTATGTTCCAGAATGTGGAATGAGCAGTTACACCTCAGGAAAGTCCTCCAGTATCCCTaGGTTCCACCACCCTCAGAC | + |
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Preference number: 5 (lower is better) Translates to: SVLVLCSRMWNEQLHLRKVLQYP*VPPPSD Trigger: GTCTGAGGGTGGTGGAACCAAGGGATACTGGAGGAC...TTTCCTGAGGTGTAACTGCTCATTCCACATTCTGGAACATAAAACTAGCACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CAA 90 bp | CTAGTTTTATGTTCCAGAATGTGGAATGAGCAGTTACACCTCAGGAAAATTCTCCCCTTCCATTCCTCTTaGTTCCAGCGGGCTGACGGT | + |
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Preference number: 5 (lower is better) Translates to: LVLCSRMWNEQLHLRKILPFHSS*FQRADG Trigger: ACCGTCAGCCCGCTGGAACAAAGAGGAATGGAAGGG...GAGAATTTTCCTGAGGTGTAACTGCTCATTCCACATTCTGGAACATAAAACTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS-3UTR CAA 90 bp | TCAGTGCTAGTTTTATGTTCCAGAATGTGGAATGAGCAGTTACACCTCAGGAAATGGGGGATAGAAGCCTaGCAATGGTCCTCCAGTATC | + |
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Preference number: 5 (lower is better) Translates to: SVLVLCSRMWNEQLHLRKWGIEA*QWSSSI Trigger: GATACTGGAGGACCATTGCAAGGCTTCTATCCCCCA...TTTCCTGAGGTGTAACTGCTCATTCCACATTCTGGAACATAAAACTAGCACTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS TCA 72 bp | GCTGGTGCAGGCAGGGGTGAGGTTACCAGCCCTCGATaGTACTGCCCTGGACCTGGCAGCAGATGGTATGGT | + |
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Preference number: 6 (lower is better) Translates to: AGAGRGEVTSPR*YCPGPGSRWYG Trigger: ACCATACCATCTGCTGCCAGGTCCAGGGCAGTATCATCGAGGGCTGGTAACCTCACCCCTGCCTGCACCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS TCA 72 bp | TACTGCCCTGGACCTGGCAGCAGATGGTATGGTAGATaGGATTCCGGAGGCAGGAAGTGGTCACTTGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: YCPGPGSRWYGR*DSGGRKWSLGP Trigger: GGGGCCAAGTGACCACTTCCTGCCTCCGGAATCTCATCTACCATACCATCTGCTGCCAGGTCCAGGGCAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS GCA 72 bp | CTATGTCTCTCTGTCGTTTGGGAGCCAGAGAGGGGCTaGACCCCTAGAATGGTGCTAGCCTCTGGATCTGGT | + |
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Preference number: 6 (lower is better) Translates to: LCLSVVWEPERG*TPRMVLASGSG Trigger: ACCAGATCCAGAGGCTAGCACCATTCTAGGGGTGCAGCCCCTCTCTGGCTCCCAAACGACAGAGAGACATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS CCA 72 bp | GTGGCTCATCTGCAGGATGAGCAATGGGTAAGGGAGTaGCTGGACCCTTCCATTCCTCTTTGTTCCAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: VAHLQDEQWVRE*LDPSIPLCSSG Trigger: CCCGCTGGAACAAAGAGGAATGGAAGGGTCCAGCCACTCCCTTACCCATTGCTCATCCTGCAGATGAGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS CCA 72 bp | CCCCAGATACTGGTGGCTCATCTGCAGGATGAGCAATaGGTAAGGGAGTGGCTGGACCCTTCCATTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: PQILVAHLQDEQ*VREWLDPSIPL Trigger: AAGAGGAATGGAAGGGTCCAGCCACTCCCTTACCCATTGCTCATCCTGCAGATGAGCCACCAGTATCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS CAA 72 bp | ATGGGTAAGGGAGTGGCTGGACCCTTCCATTCCTCTTaGTTCCAGCGGGCTGACGGTTCAACAGATGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: MGKGVAGPFHSS*FQRADGSTDAS Trigger: ACTGGCATCTGTTGAACCGTCAGCCCGCTGGAACAAAGAGGAATGGAAGGGTCCAGCCACTCCCTTACCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS TCA 72 bp | AGCAACCCAAAGGCTGGGGCCGTGACAATCTCATTGTaGATACACACCAGGTCCCTCTTGTCCAATTCCCGC | + |
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Preference number: 6 (lower is better) Translates to: SNPKAGAVTISL*IHTRSLLSNSR Trigger: GCGGGAATTGGACAAGAGGGACCTGGTGTGTATTCACAATGAGATTGTCACGGCCCCAGCCTTTGGGTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS GCA 72 bp | AGCAGGATTGGTTTCCTCTTCCTTCTTGGTACTGTCTaGCTCTGCCAGAGCTCGGGCCTGCAATCGTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: SRIGFLFLLGTV*LCQSSGLQSLL Trigger: AAGCAACGATTGCAGGCCCGAGCTCTGGCAGAGGCAGACAGTACCAAGAAGGAAGAGGAAACCAATCCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS CCA 72 bp | GAAGTAGTTTACAGGAATGGTCTCTGTAGAGCTACTTaGGCTGGCAAGAGAGACGGAGACATCAGCCACTGG | + |
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Preference number: 6 (lower is better) Translates to: EVVYRNGLCRAT*AGKRDGDISHW Trigger: CCAGTGGCTGATGTCTCCGTCTCTCTTGCCAGCCCAAGTAGCTCTACAGAGACCATTCCTGTAAACTACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS CAA 90 bp | CTTCTTGGTACTGTCTGCCTCTGCCAGAGCTCGGGCCTGCAATCGTaGCTTACAAACCTTAACAATGTCATTCATGTGCAAGTAGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: LLGTVCLCQSSGLQS*LTNLNNVIHVQVAG Trigger: GCCAGCTACTTGCACATGAATGACATTGTTAAGGTTTGTAAGCAACGATTGCAGGCCCGAGCTCTGGCAGAGGCAGACAGTACCAAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS GCA 72 bp | CTGTCTGCCTCTGCCAGAGCTCGGGCCTGCAATCGTTaGTTACAAACCTTAACAATGTCATTCATGTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: LSASARARACNR*LQTLTMSFMCK Trigger: CTTGCACATGAATGACATTGTTAAGGTTTGTAAGCAACGATTGCAGGCCCGAGCTCTGGCAGAGGCAGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS CCA 72 bp | CACATCAAGAGGAGTCAAGGGCTCCACCGAAACTCCTaGAAGGCCAGAAGAGAAGTAGTTTACAGGAATGGT | + |
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Preference number: 6 (lower is better) Translates to: HIKRSQGLHRNS*KARREVVYRNG Trigger: ACCATTCCTGTAAACTACTTCTCTTCTGGCCTTCCAGGAGTTTCGGTGGAGCCCTTGACTCCTCTTGATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS GCA 72 bp | TTCTTGGTACTGTCTGCCTCTGCCAGAGCTCGGGCCTaGAATCGTTGCTTACAAACCTTAACAATGTCATTC | + |
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Preference number: 6 (lower is better) Translates to: FLVLSASARARA*NRCLQTLTMSF Trigger: GAATGACATTGTTAAGGTTTGTAAGCAACGATTGCAGGCCCGAGCTCTGGCAGAGGCAGACAGTACCAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS CCA 72 bp | GCCAGCATACATAAAGTCCAAAAGCAACCCAAAGGCTaGGGCCGTGACAATCTCATTGTGAATACACACCAG | + |
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Preference number: 6 (lower is better) Translates to: ASIHKVQKQPKG*GRDNLIVNTHQ Trigger: CTGGTGTGTATTCACAATGAGATTGTCACGGCCCCAGCCTTTGGGTTGCTTTTGGACTTTATGTATGCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS CCA 72 bp | ACATCTTCTAGAGGAGTATCTCCCCTAAGGGCCAGCTaGCCAGCATACATAAAGTCCAAAAGCAACCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: TSSRGVSPLRAS*PAYIKSKSNPK Trigger: CTTTGGGTTGCTTTTGGACTTTATGTATGCTGGCCAGCTGGCCCTTAGGGGAGATACTCCTCTAGAAGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS CAA 72 bp | ACTGTCTGCCTCTGCCAGAGCTCGGGCCTGCAATCGTaGCTTACAAACCTTAACAATGTCATTCATGTGCAA | + |
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Preference number: 6 (lower is better) Translates to: TVCLCQSSGLQS*LTNLNNVIHVQ Trigger: TTGCACATGAATGACATTGTTAAGGTTTGTAAGCAACGATTGCAGGCCCGAGCTCTGGCAGAGGCAGACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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| CDS GCA 72 bp | AACATCCTCTGTAAAATTTCCAAAGCTCCCTTGGGCTaGTTCATACTCAGGAGGAGGGTAGAGTGGTTCATG | + |
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Preference number: 6 (lower is better) Translates to: NILCKISKAPLG*FILRRRVEWFM Trigger: CATGAACCACTCTACCCTCCTCCTGAGTATGAAGCAGCCCAAGGGAGCTTTGGAAATTTTACAGAGGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172175.3 |
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