RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZBTB24 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000019826

Ensembl transcript IDs: ENSMUST00000080771.10, ENSMUST00000213797.2, ENSMUST00000216656.2

Found 304 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCTTGCATCCAAGGATGACCTTGAATTTCGTCATCTTGCCCAGTaGTGTGGGGAGGGAAGCCAGGGCTTTGTACATACTGTAAGCACT +
Preference number: 1 (lower is better)
Translates to: CLASKDDLEFRHLAQ*CGEGSQGFVHTVST
Trigger: AGTGCTTACAGTATGTACAAAGCCCTGGCTTCCCTCCCCACACCACTGGGCAAGATGACGAAATTCAAGGTCATCCTTGGATGCAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR TCA 90 bp AACAGTCATGAGTCAAAAGGCAAGAACTGCTTAGTGAATCAGGCTTaGAGGGTCATGGGTGAGCCTGCACAGAGGGAGACCATCTCCTCA +
Preference number: 1 (lower is better)
Translates to: NSHESKGKNCLVNQA*RVMGEPAQRETISS
Trigger: TGAGGAGATGGTCTCCCTCTGTGCAGGCTCACCCATGACCCTTCAAGCCTGATTCACTAAGCAGTTCTTGCCTTTTGACTCATGACTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR TCA 90 bp AAATCAGAAGCCTGGGTGTGGGACGCAGGAAGCTGTAGCTCTCCCTaGGGTTCTAATGTGCAAGTTGAGTCACATGACAGCAAGAGAACA +
Preference number: 1 (lower is better)
Translates to: KSEAWVWDAGSCSSP*GSNVQVESHDSKRT
Trigger: TGTTCTCTTGCTGTCATGTGACTCAACTTGCACATTAGAACCTCAGGGAGAGCTACAGCTTCCTGCGTCCCACACCCAGGCTTCTGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR TCA 90 bp TTTCTCGATCTAGCTAGCTATAATTCAAGTGATAAAGTGTCTACGTaGGGCTGGGGATGCAGCTCAGCTGTAACTGCTCGGGTGGCATGC +
Preference number: 1 (lower is better)
Translates to: FLDLASYNSSDKVST*GWGCSSAVTARVAC
Trigger: GCATGCCACCCGAGCAGTTACAGCTGAGCTGCATCCCCAGCCTCACGTAGACACTTTATCACTTGAATTATAGCTAGCTAGATCGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR TCA 90 bp CACTCCATCAACTGGCCTACATCCCTGAGAAACTTCAAACATGGATaGTCCAGACAAGTAAATCAGAAGCCTGGGTGTGGGACGCAGGAA +
Preference number: 1 (lower is better)
Translates to: HSINWPTSLRNFKHG*SRQVNQKPGCGTQE
Trigger: TTCCTGCGTCCCACACCCAGGCTTCTGATTTACTTGTCTGGATCATCCATGTTTGAAGTTTCTCAGGGATGTAGGCCAGTTGATGGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR TCA 90 bp CAGAACAGAGCAAGAGAATGCTTCCGCAAAGATGAGGAACAGTCATaGGTCAAAAGGCAAGAACTGCTTAGTGAATCAGGCTTGAAGGGT +
Preference number: 1 (lower is better)
Translates to: QNRARECFRKDEEQS*VKRQELLSESGLKG
Trigger: ACCCTTCAAGCCTGATTCACTAAGCAGTTCTTGCCTTTTGACTCATGACTGTTCCTCATCTTTGCGGAAGCATTCTCTTGCTCTGTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR CCA 90 bp TCTGTTCAAAGTCCCATAATTCAGGTTTTCAACATACGTAATCTCTaGGGAGCTTTCTTTTCTCACTCATGTATCCCAGGCCTGCCTTGC +
Preference number: 1 (lower is better)
Translates to: SVQSPIIQVFNIRNL*GAFFSHSCIPGLPC
Trigger: GCAAGGCAGGCCTGGGATACATGAGTGAGAAAAGAAAGCTCCCCAGAGATTACGTATGTTGAAAACCTGAATTATGGGACTTTGAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR GCA 90 bp CTGTCACATGAAGAGGACAAAAGGTACTTCAATCACAAGGGCCAATaGCAAGTCAGAGACACCCAGAAGATATTTACAAGATGGCTAAAC +
Preference number: 1 (lower is better)
Translates to: LSHEEDKRYFNHKGQ*QVRDTQKIFTRWLN
Trigger: GTTTAGCCATCTTGTAAATATCTTCTGGGTGTCTCTGACTTGGCATTGGCCCTTGTGATTGAAGTACCTTTTGTCCTCTTCATGTGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR TCA 90 bp AAAGTTGAACTCAAACAATTTAAAGGTACTTTGGCTTTTACGTCATaGGTACGGTTTCTGAGTATGAATCTACCTTCAGTACAACTTGGT +
Preference number: 1 (lower is better)
Translates to: KVELKQFKGTLAFTS*VRFLSMNLPSVQLG
Trigger: ACCAAGTTGTACTGAAGGTAGATTCATACTCAGAAACCGTACTCATGACGTAAAAGCCAAAGTACCTTTAAATTGTTTGAGTTCAACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
3UTR-3UTR CCA 90 bp TGGGAGGCAGAGGCAGAAGCAGGTAGATTTCTGAGTTCGAGGCCAGCCTGGTCTAGGCTTGAAGGGTCATaGGTGAGCCTGCACAGAGGG +
Preference number: 2 (lower is better)
Translates to: WEAEAEAGRFLSSRPAWSRLEGS*VSLHRG
Trigger: CCCTCTGTGCAGGCTCACCCATGACCCTTCAAGCCT...AGACCAGGCTGGCCTCGAACTCAGAAATCTACCTGCTTCTGCCTCTGCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR-3UTR CCA 90 bp AATCCCAGCACTTGGGAGGCAGAGGCAGAAGCAGGTAGATTTCTGAGTTCGAGGCATGCGCATGCTCTCTaGGTTCCAGGCCTGCTACTG +
Preference number: 2 (lower is better)
Translates to: NPSTWEAEAEAGRFLSSRHAHAL*VPGLLL
Trigger: CAGTAGCAGGCCTGGAACCCAGAGAGCATGCGCATG...CCTCGAACTCAGAAATCTACCTGCTTCTGCCTCTGCCTCCCAAGTGCTGGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR-3UTR GCA 90 bp GTAATCTCTGGGGAGCTTTCTTTTCTCACTCATGTATCCCAGGCCTGCCTTGCAACTGCTCGGGTGGCATaGGCATGCTCTCTGGGTTCC +
Preference number: 2 (lower is better)
Translates to: VISGELSFLTHVSQACLATARVA*ACSLGS
Trigger: GGAACCCAGAGAGCATGCGCATGCCACCCGAGCAGT...TGCAAGGCAGGCCTGGGATACATGAGTGAGAAAAGAAAGCTCCCCAGAGATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR-3UTR GCA 90 bp CCAAGGATGACCTTGAATTTCGTCATCTTGCCCAGTGGTGTGGGGAGGGAAGCCGACCATCTCCTCATCTaGACACTGGAGATAGTACCT +
Preference number: 2 (lower is better)
Translates to: PRMTLNFVILPSGVGREADHLLI*TLEIVP
Trigger: AGGTACTATCTCCAGTGTGCAGATGAGGAGATGGTC...GGCTTCCCTCCCCACACCACTGGGCAAGATGACGAAATTCAAGGTCATCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR-3UTR GCA 90 bp AATCCCAGCACTTGGGAGGCAGAGGCAGAAGCAGGTAGATTTCTGAGTTCGAGGAATCACAAGGGCCAATaGCAAGTCAGAGACACCCAG +
Preference number: 2 (lower is better)
Translates to: NPSTWEAEAEAGRFLSSRNHKGQ*QVRDTQ
Trigger: CTGGGTGTCTCTGACTTGGCATTGGCCCTTGTGATT...CCTCGAACTCAGAAATCTACCTGCTTCTGCCTCTGCCTCCCAAGTGCTGGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR-3UTR GCA 90 bp TGGGAGGCAGAGGCAGAAGCAGGTAGATTTCTGAGTTCGAGGCCAGCCTGGTCTCCTGAGGTTCTAATGTaGAAGTTGAGTCACATGACA +
Preference number: 2 (lower is better)
Translates to: WEAEAEAGRFLSSRPAWSPEVLM*KLSHMT
Trigger: TGTCATGTGACTCAACTTGCACATTAGAACCTCAGG...AGACCAGGCTGGCCTCGAACTCAGAAATCTACCTGCTTCTGCCTCTGCCTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR CAA 90 bp TCTCTGGGGAGCTTTCTTTTCTCACTCATGTATCCCAGGCCTGCCTaGCATCCAAGGATGACCTTGAATTTCGTCATCTTGCCCAGTGGT +
Preference number: 2 (lower is better)
Translates to: SLGSFLFSLMYPRPA*HPRMTLNFVILPSG
Trigger: ACCACTGGGCAAGATGACGAAATTCAAGGTCATCCTTGGATGCAAGGCAGGCCTGGGATACATGAGTGAGAAAAGAAAGCTCCCCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR-3UTR TCA 90 bp GTAATCTCTGGGGAGCTTTCTTTTCTCACTCATGTATCCCAGGCCTGCCTTGCATTAGTGAATCAGGCTTaGAGGGTCATGGGTGAGCCT +
Preference number: 2 (lower is better)
Translates to: VISGELSFLTHVSQACLALVNQA*RVMGEP
Trigger: AGGCTCACCCATGACCCTTCAAGCCTGATTCACTAA...TGCAAGGCAGGCCTGGGATACATGAGTGAGAAAAGAAAGCTCCCCAGAGATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR-3UTR CCA 90 bp TGGGAGGCAGAGGCAGAAGCAGGTAGATTTCTGAGTTCGAGGCCAGCCTGGTCTAACATACGTAATCTCTaGGGAGCTTTCTTTTCTCAC +
Preference number: 2 (lower is better)
Translates to: WEAEAEAGRFLSSRPAWSNIRNL*GAFFSH
Trigger: GTGAGAAAAGAAAGCTCCCCAGAGATTACGTATGTT...AGACCAGGCTGGCCTCGAACTCAGAAATCTACCTGCTTCTGCCTCTGCCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR-3UTR CCA 90 bp TGGGAGGCAGAGGCAGAAGCAGGTAGATTTCTGAGTTCGAGGCCAGCCTGGTCTGAGAAACTTCAAACATaGATGATCCAGACAAGTAAA +
Preference number: 2 (lower is better)
Translates to: WEAEAEAGRFLSSRPAWSEKLQT*MIQTSK
Trigger: TTTACTTGTCTGGATCATCCATGTTTGAAGTTTCTC...AGACCAGGCTGGCCTCGAACTCAGAAATCTACCTGCTTCTGCCTCTGCCTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR-3UTR TCA 90 bp CTAGCACTTAGATTTAAGCTTGTGACAATTAGAACCCGAGCTGACCTGAAACAGGATAAAGTGTCTACGTaGGGCTGGGGATGCAGCTCA +
Preference number: 2 (lower is better)
Translates to: LALRFKLVTIRTRADLKQDKVST*GWGCSS
Trigger: TGAGCTGCATCCCCAGCCTCACGTAGACACTTTATC...CTGTTTCAGGTCAGCTCGGGTTCTAATTGTCACAAGCTTAAATCTAAGTGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR-3UTR TCA 90 bp AGATGCACTATCCAATATGGTAGCCATCAGACCTATGTGGTTATTAAAACTTATTTGAAGGGTCATGGGTaGGCCTGCACAGAGGGAGAC +
Preference number: 2 (lower is better)
Translates to: RCTIQYGSHQTYVVIKTYLKGHG*ACTEGD
Trigger: GTCTCCCTCTGTGCAGGCTCACCCATGACCCTTCAA...ATAAGTTTTAATAACCACATAGGTCTGATGGCTACCATATTGGATAGTGCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR-3UTR GCA 90 bp CTAGCACTTAGATTTAAGCTTGTGACAATTAGAACCCGAGCTGACCTGAAACAGAACAGAGCAAGAGAATaGTTCCGCAAAGATGAGGAA +
Preference number: 2 (lower is better)
Translates to: LALRFKLVTIRTRADLKQNRARE*FRKDEE
Trigger: TTCCTCATCTTTGCGGAAGCATTCTCTTGCTCTGTT...CTGTTTCAGGTCAGCTCGGGTTCTAATTGTCACAAGCTTAAATCTAAGTGCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR-3UTR TCA 90 bp ACCCAGAAGATATTTACAAGATGGCTAAACTATAAAGATGTCCACAGAACAGAGGATGAGGAACAGTCATaGGTCAAAAGGCAAGAACTG +
Preference number: 2 (lower is better)
Translates to: TQKIFTRWLNYKDVHRTEDEEQS*VKRQEL
Trigger: CAGTTCTTGCCTTTTGACTCATGACTGTTCCTCATC...CTCTGTTCTGTGGACATCTTTATAGTTTAGCCATCTTGTAAATATCTTCTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR-3UTR TCA 90 bp AGATGCACTATCCAATATGGTAGCCATCAGACCTATGTGGTTATTAAAACTTATACCATATCTGTCACATaGAGAGGACAAAAGGTACTT +
Preference number: 2 (lower is better)
Translates to: RCTIQYGSHQTYVVIKTYTISVT*RGQKVL
Trigger: AAGTACCTTTTGTCCTCTTCATGTGACAGATATGGT...ATAAGTTTTAATAACCACATAGGTCTGATGGCTACCATATTGGATAGTGCATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR GCA 72 bp TGGGGATGCAGCTCAGCTGTAACTGCTCGGGTGGCATaGGCATGCTCTCTGGGTTCCAGGCCTGCTACTGTA +
Preference number: 3 (lower is better)
Translates to: WGCSSAVTARVA*ACSLGSRPATV
Trigger: TACAGTAGCAGGCCTGGAACCCAGAGAGCATGCGCATGCCACCCGAGCAGTTACAGCTGAGCTGCATCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR TCA 72 bp GCACTTGGGAGGCAGAGGCAGAAGCAGGTAGATTTCTaGGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTC +
Preference number: 3 (lower is better)
Translates to: ALGRQRQKQVDF*VRGQPGLQSEF
Trigger: GAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTACCTGCTTCTGCCTCTGCCTCCCAAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR TCA 72 bp GAGTCAAAAGGCAAGAACTGCTTAGTGAATCAGGCTTaGAGGGTCATGGGTGAGCCTGCACAGAGGGAGACC +
Preference number: 3 (lower is better)
Translates to: ESKGKNCLVNQA*RVMGEPAQRET
Trigger: GGTCTCCCTCTGTGCAGGCTCACCCATGACCCTTCAAGCCTGATTCACTAAGCAGTTCTTGCCTTTTGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR TCA 72 bp CTAGCTAGCTATAATTCAAGTGATAAAGTGTCTACGTaGGGCTGGGGATGCAGCTCAGCTGTAACTGCTCGG +
Preference number: 3 (lower is better)
Translates to: LASYNSSDKVST*GWGCSSAVTAR
Trigger: CCGAGCAGTTACAGCTGAGCTGCATCCCCAGCCTCACGTAGACACTTTATCACTTGAATTATAGCTAGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR TCA 72 bp AACTGGCCTACATCCCTGAGAAACTTCAAACATGGATaGTCCAGACAAGTAAATCAGAAGCCTGGGTGTGGG +
Preference number: 3 (lower is better)
Translates to: NWPTSLRNFKHG*SRQVNQKPGCG
Trigger: CCCACACCCAGGCTTCTGATTTACTTGTCTGGATCATCCATGTTTGAAGTTTCTCAGGGATGTAGGCCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR GCA 72 bp ACGCAGGAAGCTGTAGCTCTCCCTGAGGTTCTAATGTaGAAGTTGAGTCACATGACAGCAAGAGAACAGATA +
Preference number: 3 (lower is better)
Translates to: TQEAVALPEVLM*KLSHMTAREQI
Trigger: TATCTGTTCTCTTGCTGTCATGTGACTCAACTTGCACATTAGAACCTCAGGGAGAGCTACAGCTTCCTGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR TCA 72 bp GCAAGAGAATGCTTCCGCAAAGATGAGGAACAGTCATaGGTCAAAAGGCAAGAACTGCTTAGTGAATCAGGC +
Preference number: 3 (lower is better)
Translates to: ARECFRKDEEQS*VKRQELLSESG
Trigger: GCCTGATTCACTAAGCAGTTCTTGCCTTTTGACTCATGACTGTTCCTCATCTTTGCGGAAGCATTCTCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR TCA 72 bp TCCACAGAACAGAGCAAGAGAATGCTTCCGCAAAGATaGGGAACAGTCATGAGTCAAAAGGCAAGAACTGCT +
Preference number: 3 (lower is better)
Translates to: STEQSKRMLPQR*GTVMSQKARTA
Trigger: AGCAGTTCTTGCCTTTTGACTCATGACTGTTCCTCATCTTTGCGGAAGCATTCTCTTGCTCTGTTCTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR CCA 72 bp CATCAACTGGCCTACATCCCTGAGAAACTTCAAACATaGATGATCCAGACAAGTAAATCAGAAGCCTGGGTG +
Preference number: 3 (lower is better)
Translates to: HQLAYIPEKLQT*MIQTSKSEAWV
Trigger: CACCCAGGCTTCTGATTTACTTGTCTGGATCATCCATGTTTGAAGTTTCTCAGGGATGTAGGCCAGTTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR TCA 72 bp GATGGACCCTCTCTACCCAATGATTCAACCTATGCATaGGTGTTTGTTCTAAACAAGACCATACTCTATGGC +
Preference number: 3 (lower is better)
Translates to: DGPSLPNDSTYA*VFVLNKTILYG
Trigger: GCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCATAGGTTGAATCATTGGGTAGAGAGGGTCCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
3UTR GCA 72 bp GAAGAGGACAAAAGGTACTTCAATCACAAGGGCCAATaGCAAGTCAGAGACACCCAGAAGATATTTACAAGA +
Preference number: 3 (lower is better)
Translates to: EEDKRYFNHKGQ*QVRDTQKIFTR
Trigger: TCTTGTAAATATCTTCTGGGTGTCTCTGACTTGGCATTGGCCCTTGTGATTGAAGTACCTTTTGTCCTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR CCA 72 bp AGTCCCATAATTCAGGTTTTCAACATACGTAATCTCTaGGGAGCTTTCTTTTCTCACTCATGTATCCCAGGC +
Preference number: 3 (lower is better)
Translates to: SPIIQVFNIRNL*GAFFSHSCIPG
Trigger: GCCTGGGATACATGAGTGAGAAAAGAAAGCTCCCCAGAGATTACGTATGTTGAAAACCTGAATTATGGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR TCA 72 bp GTCTGTATGTTGTTAGTGACTACCATATCTGTCACATaGAGAGGACAAAAGGTACTTCAATCACAAGGGCCA +
Preference number: 3 (lower is better)
Translates to: VCMLLVTTISVT*RGQKVLQSQGP
Trigger: TGGCCCTTGTGATTGAAGTACCTTTTGTCCTCTTCATGTGACAGATATGGTAGTCACTAACAACATACAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR-3UTR CAA 90 bp CTTTGTACATACTGTAAGCACTCCATCAACTGGCCTACATCCCTGAGAAACTTCAACAAGGTCTGTATGTaGTTAGTGACTACCATATCT +
Preference number: 3 (lower is better)
Translates to: LCTYCKHSINWPTSLRNFNKVCM*LVTTIS
Trigger: AGATATGGTAGTCACTAACAACATACAGACCTTGTT...GAAGTTTCTCAGGGATGTAGGCCAGTTGATGGAGTGCTTACAGTATGTACAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR TCA 72 bp CTCAAACAATTTAAAGGTACTTTGGCTTTTACGTCATaGGTACGGTTTCTGAGTATGAATCTACCTTCAGTA +
Preference number: 3 (lower is better)
Translates to: LKQFKGTLAFTS*VRFLSMNLPSV
Trigger: TACTGAAGGTAGATTCATACTCAGAAACCGTACTCATGACGTAAAAGCCAAAGTACCTTTAAATTGTTTGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp TGGGAGGCAGAGGCAGAAGCAGGTAGATTTCTGAGTTCGAGGCCAGCCTGGTCTCTGCTGCACCTACTCTaGCTCTCCTGTCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: WEAEAEAGRFLSSRPAWSLLHLL*LSCPSP
Trigger: TGGGGATGGACAGGAGAGCCAGAGTAGGTGCAGCAG...AGACCAGGCTGGCCTCGAACTCAGAAATCTACCTGCTTCTGCCTCTGCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR GCA 90 bp CTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCCCGGGTCTGTGGCCATaGTCTGGGGGCTCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: LGQLYHTKIKFKRWTLRGPGLWP*SGGSRQ
Trigger: CTGCCGAGAGCCCCCAGAGCATGGCCACAGACCCGG...GCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp CCAAGGATGACCTTGAATTTCGTCATCTTGCCCAGTGGTGTGGGGAGGGAAGCCCTCTGCAGCCAGTTCTaGTCTCCCTTCCTGCAAACC +
Preference number: 4 (lower is better)
Translates to: PRMTLNFVILPSGVGREALCSQF*SPFLQT
Trigger: GGTTTGCAGGAAGGGAGATCAGAACTGGCTGCAGAG...GGCTTCCCTCCCCACACCACTGGGCAAGATGACGAAATTCAAGGTCATCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR CCA 90 bp CTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCTCTGTGGCCATGCTCTaGGGGCTCTCGGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: LGQLYHTKIKFKRWTLRGSVAML*GLSAAT
Trigger: CGTGGCTGCCGAGAGCCCCCAGAGCATGGCCACAGA...GCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp CTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCTGGAGGGGACAGGGGTaGCTCGGGCTCCTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: LGQLYHTKIKFKRWTLRGWRGQG*LGLLCQ
Trigger: CTGACACAGGAGCCCGAGCCACCCCTGTCCCCTCCA...GCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp AATCCCAGCACTTGGGAGGCAGAGGCAGAAGCAGGTAGATTTCTGAGTTCGAGGTTGTTCACTCTCAGCTaGAGCTCTCCCTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: NPSTWEAEAEAGRFLSSRLFTLS*SSPSAA
Trigger: GGCTGCAGAGGGAGAGCTGCAGCTGAGAGTGAACAA...CCTCGAACTCAGAAATCTACCTGCTTCTGCCTCTGCCTCCCAAGTGCTGGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR CCA 90 bp GGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCAAATGGCAGCCGGGTCTGTaGCCATGCTCTGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: GQLYHTKIKFKRWTLRGKWQPGL*PCSGGS
Trigger: AGAGCCCCCAGAGCATGGCCACAGACCCGGCTGCCA...TTTGCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp GGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCAAATGGAGGGGACAGGGGTaGCTCGGGCTCCTGTGTCAG +
Preference number: 4 (lower is better)
Translates to: GQLYHTKIKFKRWTLRGKWRGQG*LGLLCQ
Trigger: CTGACACAGGAGCCCGAGCCACCCCTGTCCCCTCCA...TTTGCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp CTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCGGTCAGCTCTGCTCCTaGCCTAGTGGAGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: LGQLYHTKIKFKRWTLRGGQLCS*PSGGDR
Trigger: CCTGTCCCCTCCACTAGGCCAGGAGCAGAGCTGACC...GCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp CCAAGGATGACCTTGAATTTCGTCATCTTGCCCAGTGGTGTGGGGAGGGAAGCCTCGAAGTTACCCGTGTaGCGTCTCTGGTGGATTGCT +
Preference number: 4 (lower is better)
Translates to: PRMTLNFVILPSGVGREASKLPV*RLWWIA
Trigger: AGCAATCCACCAGAGACGCCACACGGGTAACTTCGA...GGCTTCCCTCCCCACACCACTGGGCAAGATGACGAAATTCAAGGTCATCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
3UTR CAA 72 bp ATGTATCCCAGGCCTGCCTTGCATCCAAGGATGACCTaGAATTTCGTCATCTTGCCCAGTGGTGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: MYPRPALHPRMT*NFVILPSGVGR
Trigger: CCTCCCCACACCACTGGGCAAGATGACGAAATTCAAGGTCATCCTTGGATGCAAGGCAGGCCTGGGATACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR GCA 90 bp GAAGGGTCATGGGTGAGCCTGCACAGAGGGAGACCATCTCCTCATCTGCACACTGTTATCCTGGAAGTCTaGGTATGCCTTTACCAGGTC +
Preference number: 4 (lower is better)
Translates to: EGSWVSLHRGRPSPHLHTVILEV*VCLYQV
Trigger: GACCTGGTAAAGGCATACGCAGACTTCCAGGATAAC...AGTGTGCAGATGAGGAGATGGTCTCCCTCTGTGCAGGCTCACCCATGACCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR GCA 90 bp GGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCAAATGGTGGTCAGCGCCTTaGCGCACACGGTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: GQLYHTKIKFKRWTLRGKWWSAP*RTRCRC
Trigger: ACACCTGCACCGTGTGCGGCAAGGCGCTGACCACCA...TTTGCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp ATTACAGATAAGACAGTTTCTGCCCTGATGGAGCCCACGATAAAGAATGGCTGGGCAGGGAGTGCTTGGTaGTCAGCGCCTTGCCGCACA +
Preference number: 4 (lower is better)
Translates to: ITDKTVSALMEPTIKNGWAGSAW*SAPCRT
Trigger: TGTGCGGCAAGGCGCTGACCACCAAGCACTCCCTGC...CCAGCCATTCTTTATCGTGGGCTCCATCAGGGCAGAAACTGTCTTATCTGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGTCTGTGGCCATGCTCTaGGGGCTCTCGGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRSVAML*GLSAAT
Trigger: CGTGGCTGCCGAGAGCCCCCAGAGCATGGCCACAGA...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp CTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCTGCTCCTGGTGGGCGTaGAGATGCTCCAGCGTTTCC +
Preference number: 4 (lower is better)
Translates to: LGQLYHTKIKFKRWTLRGCSWWA*RCSSVS
Trigger: GGAAACGCTGGAGCATCTCCACGCCCACCAGGAGCA...GCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp GAAGGGTCATGGGTGAGCCTGCACAGAGGGAGACCATCTCCTCATCTGCACACTTTCCGCAAACATCATTaGGAAATACTCGCTACTGGC +
Preference number: 4 (lower is better)
Translates to: EGSWVSLHRGRPSPHLHTFRKHH*EILATG
Trigger: GCCAGTAGCGAGTATTTCTCAATGATGTTTGCGGAA...AGTGTGCAGATGAGGAGATGGTCTCCCTCTGTGCAGGCTCACCCATGACCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR GCA 90 bp TGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACATTCAACCCGGGTCTGTGGCCATaGTCTGGGGGCTCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: CMSVCSKQDHTLWLWTFNPGLWP*SGGSRQ
Trigger: CTGCCGAGAGCCCCCAGAGCATGGCCACAGACCCGG...GTTGAATGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp AATCCCAGCACTTGGGAGGCAGAGGCAGAAGCAGGTAGATTTCTGAGTTCGAGGTTTGATCCTCCAGACTaGCCAGCACAGTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: NPSTWEAEAEAGRFLSSRFDPPD*PAQCHC
Trigger: ACAGTGACACTGTGCTGGCCAGTCTGGAGGATCAAA...CCTCGAACTCAGAAATCTACCTGCTTCTGCCTCTGCCTCCCAAGTGCTGGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR CCA 90 bp CTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCCTGCTGCACCTACTCTaGCTCTCCTGTCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: LGQLYHTKIKFKRWTLRGLLHLL*LSCPSP
Trigger: TGGGGATGGACAGGAGAGCCAGAGTAGGTGCAGCAG...GCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp GTAATCTCTGGGGAGCTTTCTTTTCTCACTCATGTATCCCAGGCCTGCCTTGCAGTCACTGTGAGTGTCTaGGTGTACCATAAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VISGELSFLTHVSQACLAVTVSV*VYHKLP
Trigger: GGGCAGCTTATGGTACACTCAGACACTCACAGTGAC...TGCAAGGCAGGCCTGGGATACATGAGTGAGAAAAGAAAGCTCCCCAGAGATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR GCA 90 bp TGGGAGGCAGAGGCAGAAGCAGGTAGATTTCTGAGTTCGAGGCCAGCCTGGTCTTCTGATCTCCCTTCCTaGAAACCATTGGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: WEAEAEAGRFLSSRPAWSSDLPS*KPLAFL
Trigger: AAGAAAAGCCAATGGTTTGCAGGAAGGGAGATCAGA...AGACCAGGCTGGCCTCGAACTCAGAAATCTACCTGCTTCTGCCTCTGCCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR GCA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGTGCTCCAGCAGGGAGTaGTTGGTGGTCAGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRCSSRE*LVVSAL
Trigger: CAAGGCGCTGACCACCAAGCACTCCCTGCTGGAGCA...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp GGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCAAATGCAGCTGCTCAGGCTaGTGTGTGAGCAGGGTGATG +
Preference number: 4 (lower is better)
Translates to: GQLYHTKIKFKRWTLRGKCSCSG*CVSRVM
Trigger: CATCACCCTGCTCACACAGCAGCCTGAGCAGCTGCA...TTTGCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp GGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCAAACTGCTGCACCTACTCTaGCTCTCCTGTCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: GQLYHTKIKFKRWTLRGKLLHLL*LSCPSP
Trigger: TGGGGATGGACAGGAGAGCCAGAGTAGGTGCAGCAG...TTTGCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp GGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCAAACTGGTTGTTTGCTCCTaGTGGGCGTGGAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: GQLYHTKIKFKRWTLRGKLVVCS*WAWRCS
Trigger: GGAGCATCTCCACGCCCACCAGGAGCAAACAACCAG...TTTGCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp CTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCCTGCAGGTACTGAGCTaGTTGTTTGCTCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LGQLYHTKIKFKRWTLRGLQVLS*LFAPGG
Trigger: CCCACCAGGAGCAAACAACCAGCTCAGTACCTGCAG...GCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp CTACCTTCAGTACAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGACGGCCAGAGGCGCTTaGGTCAGCTCTGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LPSVQLGQLYHTKIKFKRTARGA*VSSAPG
Trigger: GCCAGGAGCAGAGCTGACCCAAGCGCCTCTGGCCGT...CCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTGTACTGAAGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp AACCTATGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACAACGGCCAGAGGCGCTTaGGTCAGCTCTGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: NLCMSVCSKQDHTLWLWTTARGA*VSSAPG
Trigger: GCCAGGAGCAGAGCTGACCCAAGCGCCTCTGGCCGT...TGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCATAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp GGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCAAAAAGCCCTTCTTCCTTTaGTCCTCCAGACTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GQLYHTKIKFKRWTLRGKKPFFL*SSRLAS
Trigger: GCTGGCCAGTCTGGAGGATCAAAGGAAGAAGGGCTT...TTTGCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp TCACAAGGGCCAATGCCAAGTCAGAGACACCCAGAAGATATTTACAAGATGGCTAAGCCCTTCTTCCTTTaGTCCTCCAGACTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SQGPMPSQRHPEDIYKMAKPFFL*SSRLAS
Trigger: GCTGGCCAGTCTGGAGGATCAAAGGAAGAAGGGCTT...AGCCATCTTGTAAATATCTTCTGGGTGTCTCTGACTTGGCATTGGCCCTTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR TCA 90 bp GGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCAAATCGGTGACAAGAAGCTaGATCTCCTGCTCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: GQLYHTKIKFKRWTLRGKSVTRS*ISCSPD
Trigger: GTCGGGAGAGCAGGAGATTCAGCTTCTTGTCACCGA...TTTGCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp ATTACAGATAAGACAGTTTCTGCCCTGATGGAGCCCACGATAAAGAATGGCTGGATCACACTGAGGCTCTaGATGTGCTCTGCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ITDKTVSALMEPTIKNGWITLRL*MCSACS
Trigger: GGAGCAGGCAGAGCACATTCAGAGCCTCAGTGTGAT...CCAGCCATTCTTTATCGTGGGCTCCATCAGGGCAGAAACTGTCTTATCTGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp GAAGGGTCATGGGTGAGCCTGCACAGAGGGAGACCATCTCCTCATCTGCACACTTTATGGGCTCGGAAATaGACATTCTCCACGATTAAA +
Preference number: 4 (lower is better)
Translates to: EGSWVSLHRGRPSPHLHTLWARK*TFSTIK
Trigger: TTTAATCGTGGAGAATGTGCATTTCCGAGCCCATAA...AGTGTGCAGATGAGGAGATGGTCTCCCTCTGTGCAGGCTCACCCATGACCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR GCA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGCCACTGGCGTCCCAGTaGAGTTCAAAGCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRPLASQ*SSKLVA
Trigger: AGCCACCAGCTTTGAACTGCACTGGGACGCCAGTGG...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp CTTTGTACATACTGTAAGCACTCCATCAACTGGCCTACATCCCTGAGAAACTTCCCACTGGCGTCCCAGTaGAGTTCAAAGCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LCTYCKHSINWPTSLRNFPLASQ*SSKLVA
Trigger: AGCCACCAGCTTTGAACTGCACTGGGACGCCAGTGG...GAAGTTTCTCAGGGATGTAGGCCAGTTGATGGAGTGCTTACAGTATGTACAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR GCA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGAGTGCAGGCTCATGTaGTCCAGCAGGGAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRECRLM*SSRECL
Trigger: CAAGCACTCCCTGCTGGAGCACATGAGCCTGCACTC...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp ATTACAGATAAGACAGTTTCTGCCCTGATGGAGCCCACGATAAAGAATGGCTGGGGCTTCTTGCCCGTATaGAGGATGCAGTGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ITDKTVSALMEPTIKNGWGFLPV*RMQCLL
Trigger: GAGGAGACACTGCATCCTGCATACGGGCAAGAAGCC...CCAGCCATTCTTTATCGTGGGCTCCATCAGGGCAGAAACTGTCTTATCTGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp GGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCAAATGGTGGGCGTGGAGATaGTCCAGCGTTTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: GQLYHTKIKFKRWTLRGKWWAWR*SSVSLE
Trigger: TTCCAAGGAAACGCTGGAGCATCTCCACGCCCACCA...TTTGCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp ATTACAGATAAGACAGTTTCTGCCCTGATGGAGCCCACGATAAAGAATGGCTGGGTCCATCCCCAGCCTTaGGGTCAAAGTTCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: ITDKTVSALMEPTIKNGWVHPQP*GQSSRP
Trigger: AGGACGAGAACTTTGACCCCAAGGCTGGGGATGGAC...CCAGCCATTCTTTATCGTGGGCTCCATCAGGGCAGAAACTGTCTTATCTGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp TGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACATTCAACGCAGGGAGTGCTTGGTaGTCAGCGCCTTGCCGCACA +
Preference number: 4 (lower is better)
Translates to: CMSVCSKQDHTLWLWTFNAGSAW*SAPCRT
Trigger: TGTGCGGCAAGGCGCTGACCACCAAGCACTCCCTGC...GTTGAATGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGCCTGCTCTCCCGACGTaGAGAGCTGGTATGGTTGCA +
Preference number: 4 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRPALPT*RAGMVA
Trigger: TGCAACCATACCAGCTCTCCACGTCGGGAGAGCAGG...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGTGCACTGGCTCAGTCTaGGAGGACTCCATCTGGCCT +
Preference number: 4 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRCTGSV*EDSIWP
Trigger: AGGCCAGATGGAGTCCTCCCAGACTGAGCCAGTGCA...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGAAGCCCTTCTTCCTTTaGTCCTCCAGACTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRKPFFL*SSRLAS
Trigger: GCTGGCCAGTCTGGAGGATCAAAGGAAGAAGGGCTT...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp ATTACAGATAAGACAGTTTCTGCCCTGATGGAGCCCACGATAAAGAATGGCTGGCTCACCAGCAGGCTCTaGTTCCTTGTCTTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: ITDKTVSALMEPTIKNGWLTSRL*FLVFWS
Trigger: ACTCCAGAAGACAAGGAATCAGAGCCTGCTGGTGAG...CCAGCCATTCTTTATCGTGGGCTCCATCAGGGCAGAAACTGTCTTATCTGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp CTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCAAAAGACTTCTGTCCTaGGTGCAGGCTCATGTGCTC +
Preference number: 4 (lower is better)
Translates to: LGQLYHTKIKFKRWTLRGKRLLS*VQAHVL
Trigger: GAGCACATGAGCCTGCACTCAGGACAGAAGTCTTTT...GCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp CTACCTTCAGTACAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGCTCCTCGGTGGATCCTaGTGTGGGTCTGAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LPSVQLGQLYHTKIKFKRLLGGS*CGSEGS
Trigger: GCTCCCTTCAGACCCACATCAGGATCCACCGAGGAG...CCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTGTACTGAAGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080771.10
CDS-3UTR TCA 90 bp GGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCAAATGGTATGGTTGCAGCTaGAGAATGTTCCTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: GQLYHTKIKFKRWTLRGKWYGCS*RMFLPS
Trigger: CGAGGGCAGGAACATTCTTCAGCTGCAACCATACCA...TTTGCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp CTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCGCAGTAGCCAGGATCTaGTCTGTCGTTTTCTCACTG +
Preference number: 4 (lower is better)
Translates to: LGQLYHTKIKFKRWTLRGAVARI*SVVFSL
Trigger: CAGTGAGAAAACGACAGAGCAGATCCTGGCTACTGC...GCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp CTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCCTGGAGTCTGCCGTGTaGTTCTCTTTGCTGTGGATT +
Preference number: 4 (lower is better)
Translates to: LGQLYHTKIKFKRWTLRGLESAV*FSLLWI
Trigger: AATCCACAGCAAAGAGAAGCACACGGCAGACTCCAG...GCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp ATTACAGATAAGACAGTTTCTGCCCTGATGGAGCCCACGATAAAGAATGGCTGGTACTGCCAGAAACACTaGTGGAGTCTGCCGTGTGCT +
Preference number: 4 (lower is better)
Translates to: ITDKTVSALMEPTIKNGWYCQKH*WSLPCA
Trigger: AGCACACGGCAGACTCCAGCAGTGTTTCTGGCAGTA...CCAGCCATTCTTTATCGTGGGCTCCATCAGGGCAGAAACTGTCTTATCTGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp AACCTATGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACAATCAGGCCCTGCAGCTaGTCAGGCTGCTGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: NLCMSVCSKQDHTLWLWTIRPCS*SGCCVS
Trigger: GCTCACACAGCAGCCTGAGCAGCTGCAGGGCCTGAT...TGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCATAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp GGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCAAATGTGATGACATGCACTaGCTCAGTCTGGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: GQLYHTKIKFKRWTLRGKCDDMH*LSLGGL
Trigger: GAGTCCTCCCAGACTGAGCCAGTGCATGTCATCACA...TTTGCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGCTGCAGGTACTGAGCTaGTTGTTTGCTCCTGGTGGG +
Preference number: 4 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRLQVLS*LFAPGG
Trigger: CCCACCAGGAGCAAACAACCAGCTCAGTACCTGCAG...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGTCACTGTGAGTGTCTaGGTGTACCATAAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRVTVSV*VYHKLP
Trigger: GGGCAGCTTATGGTACACTCAGACACTCACAGTGAC...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp AACCTATGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACACCACTGGCGTCCCAGTaGAGTTCAAAGCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: NLCMSVCSKQDHTLWLWTPLASQ*SSKLVA
Trigger: AGCCACCAGCTTTGAACTGCACTGGGACGCCAGTGG...TGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCATAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp ACCAATGACCCCAAAGAAAAGCTACCAATCTTGAAGAGACAAAGTAGATCAAATTGGTGGTCAGCGCCTTaGCGCACACGGTGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: TNDPKEKLPILKRQSRSNWWSAP*RTRCRC
Trigger: ACACCTGCACCGTGTGCGGCAAGGCGCTGACCACCA...ATTTGATCTACTTTGTCTCTTCAAGATTGGTAGCTTTTCTTTGGGGTCATTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp CTACCTTCAGTACAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGGAGTGCAGGCTCATGTaGTCCAGCAGGGAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: LPSVQLGQLYHTKIKFKRECRLM*SSRECL
Trigger: CAAGCACTCCCTGCTGGAGCACATGAGCCTGCACTC...CCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTGTACTGAAGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGTACTGCCAGAAACACTaGTGGAGTCTGCCGTGTGCT +
Preference number: 4 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRYCQKH*WSLPCA
Trigger: AGCACACGGCAGACTCCAGCAGTGTTTCTGGCAGTA...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp AACCTATGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACATGCAGCTGCTCAGGCTaGTGTGTGAGCAGGGTGATG +
Preference number: 4 (lower is better)
Translates to: NLCMSVCSKQDHTLWLWTCSCSG*CVSRVM
Trigger: CATCACCCTGCTCACACAGCAGCCTGAGCAGCTGCA...TGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCATAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp TGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACATTCAACGAAAGGATCAGGCCCTaGAGCTGCTCAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: CMSVCSKQDHTLWLWTFNERIRP*SCSGCC
Trigger: ACAGCAGCCTGAGCAGCTGCAGGGCCTGATCCTTTC...GTTGAATGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp CTACCTTCAGTACAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGGCTCTGAATGTGCTCTaGCTGCTCCTGCTGAGCGGA +
Preference number: 4 (lower is better)
Translates to: LPSVQLGQLYHTKIKFKRALNVL*LLLLSG
Trigger: TCCGCTCAGCAGGAGCAGGCAGAGCACATTCAGAGC...CCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTGTACTGAAGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp AATCCCAGCACTTGGGAGGCAGAGGCAGAAGCAGGTAGATTTCTGAGTTCGAGGACACGAAGGCTTTATTaGCATGTCTACCATGTAGAA +
Preference number: 4 (lower is better)
Translates to: NPSTWEAEAEAGRFLSSRTRRLY*HVYHVE
Trigger: TTCTACATGGTAGACATGGCAATAAAGCCTTCGTGT...CCTCGAACTCAGAAATCTACCTGCTTCTGCCTCTGCCTCCCAAGTGCTGGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR CCA 90 bp CTAGCACTTAGATTTAAGCTTGTGACAATTAGAACCCGAGCTGACCTGAAACAGGTCCATCCCCAGCCTTaGGGTCAAAGTTCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: LALRFKLVTIRTRADLKQVHPQP*GQSSRP
Trigger: AGGACGAGAACTTTGACCCCAAGGCTGGGGATGGAC...CTGTTTCAGGTCAGCTCGGGTTCTAATTGTCACAAGCTTAAATCTAAGTGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR CCA 90 bp AACCTATGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACACCCCCGTGTGCATCCTaGTATGGACCTGCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: NLCMSVCSKQDHTLWLWTPPCAS*YGPARS
Trigger: ACTCCTTGCAGGTCCATACCAGGATGCACACGGGGG...TGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCATAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp CTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCCGTGGAGAGCTGGTATaGTTGCAGCTGAAGAATGTT +
Preference number: 4 (lower is better)
Translates to: LGQLYHTKIKFKRWTLRGRGELV*LQLKNV
Trigger: AACATTCTTCAGCTGCAACCATACCAGCTCTCCACG...GCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp AAGACCATACTCTATGGCTGTGGACATTCAACACTTATAGAAACATATAAAACCTGGCAGCCGGGTCTGTaGCCATGCTCTGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: KTILYGCGHSTLIETYKTWQPGL*PCSGGS
Trigger: AGAGCCCCCAGAGCATGGCCACAGACCCGGCTGCCA...GGTTTTATATGTTTCTATAAGTGTTGAATGTCCACAGCCATAGAGTATGGTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp CTACCTTCAGTACAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGCACTGGCTCAGTCTaGGAGGACTCCATCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LPSVQLGQLYHTKIKFKRCTGSV*EDSIWP
Trigger: AGGCCAGATGGAGTCCTCCCAGACTGAGCCAGTGCA...CCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTGTACTGAAGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp AACCTATGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACAGTTGTTTGCTCCTGGTaGGCGTGGAGATGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NLCMSVCSKQDHTLWLWTVVCSW*AWRCSS
Trigger: GCTGGAGCATCTCCACGCCCACCAGGAGCAAACAAC...TGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCATAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp ACCAATGACCCCAAAGAAAAGCTACCAATCTTGAAGAGACAAAGTAGATCAAATGGTCAGCTCTGCTCCTaGCCTAGTGGAGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: TNDPKEKLPILKRQSRSNGQLCS*PSGGDR
Trigger: CCTGTCCCCTCCACTAGGCCAGGAGCAGAGCTGACC...ATTTGATCTACTTTGTCTCTTCAAGATTGGTAGCTTTTCTTTGGGGTCATTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp GGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCAAAAGCACAGTGTCACTGTaGGTGTCTGAGTGTACCATA +
Preference number: 4 (lower is better)
Translates to: GQLYHTKIKFKRWTLRGKSTVSL*VSECTI
Trigger: TATGGTACACTCAGACACTCACAGTGACACTGTGCT...TTTGCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGATGCCAAAGGTGTCTaGAACCATGCCTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRDAKGV*NHAFQH
Trigger: ATGCTGGAAGGCATGGTTGCAGACACCTTTGGCATC...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp GGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCAAAGTTATCCTGGAAGTCTaGGTATGCCTTTACCAGGTC +
Preference number: 4 (lower is better)
Translates to: GQLYHTKIKFKRWTLRGKVILEV*VCLYQV
Trigger: GACCTGGTAAAGGCATACGCAGACTTCCAGGATAAC...TTTGCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp TGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACATTCAACTTGTTCACTCTCAGCTaGAGCTCTCCCTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: CMSVCSKQDHTLWLWTFNLFTLS*SSPSAA
Trigger: GGCTGCAGAGGGAGAGCTGCAGCTGAGAGTGAACAA...GTTGAATGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp CTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCATTTGCCACAGATGCTaGAGGAGTATGGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: LGQLYHTKIKFKRWTLRGICHRC*RSMAFL
Trigger: GAGAAAAGCCATACTCCTGCAGCATCTGTGGCAAAT...GCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp CTACCTTCAGTACAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGCCCGTATGCAGGATaGAGTGTCTCCTCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: LPSVQLGQLYHTKIKFKRCPYAG*SVSSWH
Trigger: GTGCCAAGAGGAGACACTGCATCCTGCATACGGGCA...CCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTGTACTGAAGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp AACCTATGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACATGCCCGTATGCAGGATaGAGTGTCTCCTCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: NLCMSVCSKQDHTLWLWTCPYAG*SVSSWH
Trigger: GTGCCAAGAGGAGACACTGCATCCTGCATACGGGCA...TGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCATAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp TGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACATTCAACTGGTGGGCGTGGAGATaGTCCAGCGTTTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: CMSVCSKQDHTLWLWTFNWWAWR*SSVSLE
Trigger: TTCCAAGGAAACGCTGGAGCATCTCCACGCCCACCA...GTTGAATGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGTTTGATCCTCCAGACTaGCCAGCACAGTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRFDPPD*PAQCHC
Trigger: ACAGTGACACTGTGCTGGCCAGTCTGGAGGATCAAA...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp AACCTATGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACAGTCCATCCCCAGCCTTaGGGTCAAAGTTCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: NLCMSVCSKQDHTLWLWTVHPQP*GQSSRP
Trigger: AGGACGAGAACTTTGACCCCAAGGCTGGGGATGGAC...TGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCATAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp CTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCCTCTTGGCAGTACTCTaGTCATCTTCATCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: LGQLYHTKIKFKRWTLRGLLAVL*SSSSPR
Trigger: TCTTGGAGATGAAGATGACCAGAGTACTGCCAAGAG...GCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGTCTCCTCTTGGCACTaGAGTCAGAGAAGCATTTGC +
Preference number: 4 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRVSSWH*SQRSIC
Trigger: GCAAATGCTTCTCTGACTCCAGTGCCAAGAGGAGAC...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp GGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCAAACGTGGAGAGCTGGTATaGTTGCAGCTGAAGAATGTT +
Preference number: 4 (lower is better)
Translates to: GQLYHTKIKFKRWTLRGKRGELV*LQLKNV
Trigger: AACATTCTTCAGCTGCAACCATACCAGCTCTCCACG...TTTGCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGCCCCTGGCTGGGACCTaGCATGAAGTTAATGTTATG +
Preference number: 4 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRPLAGT*HEVNVM
Trigger: CATAACATTAACTTCATGCCAGGTCCCAGCCAGGGG...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp ATTACAGATAAGACAGTTTCTGCCCTGATGGAGCCCACGATAAAGAATGGCTGGGATGCTGCAGGAGTATaGCTTTTCTCCTCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: ITDKTVSALMEPTIKNGWDAAGV*LFSSVC
Trigger: ACACACAGAGGAGAAAAGCCATACTCCTGCAGCATC...CCAGCCATTCTTTATCGTGGGCTCCATCAGGGCAGAAACTGTCTTATCTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp GGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCAAATTCCGCAAACATCATTaGGAAATACTCGCTACTGGC +
Preference number: 4 (lower is better)
Translates to: GQLYHTKIKFKRWTLRGKFRKHH*EILATG
Trigger: GCCAGTAGCGAGTATTTCTCAATGATGTTTGCGGAA...TTTGCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp AACCTATGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACACTCACCAGCAGGCTCTaGTTCCTTGTCTTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: NLCMSVCSKQDHTLWLWTLTSRL*FLVFWS
Trigger: ACTCCAGAAGACAAGGAATCAGAGCCTGCTGGTGAG...TGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCATAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp AACCTATGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACATGGTATGGTTGCAGCTaGAGAATGTTCCTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: NLCMSVCSKQDHTLWLWTWYGCS*RMFLPS
Trigger: CGAGGGCAGGAACATTCTTCAGCTGCAACCATACCA...TGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCATAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGCTGGAAGTCTGCGTATaGCTTTACCAGGTCATAGAC +
Preference number: 4 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRLEVCV*LYQVID
Trigger: GTCTATGACCTGGTAAAGGCATACGCAGACTTCCAG...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp ATTACAGATAAGACAGTTTCTGCCCTGATGGAGCCCACGATAAAGAATGGCTGGAGCATTTGCCACAGATaGTGCAGGAGTATGGCTTTT +
Preference number: 4 (lower is better)
Translates to: ITDKTVSALMEPTIKNGWSICHR*CRSMAF
Trigger: AAAAGCCATACTCCTGCAGCATCTGTGGCAAATGCT...CCAGCCATTCTTTATCGTGGGCTCCATCAGGGCAGAAACTGTCTTATCTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp AAGACCATACTCTATGGCTGTGGACATTCAACACTTATAGAAACATATAAAACCATCAGGCCCTGCAGCTaGTCAGGCTGCTGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: KTILYGCGHSTLIETYKTIRPCS*SGCCVS
Trigger: GCTCACACAGCAGCCTGAGCAGCTGCAGGGCCTGAT...GGTTTTATATGTTTCTATAAGTGTTGAATGTCCACAGCCATAGAGTATGGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp ACCAATGACCCCAAAGAAAAGCTACCAATCTTGAAGAGACAAAGTAGATCAAATGAAAGGATCAGGCCCTaGAGCTGCTCAGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: TNDPKEKLPILKRQSRSNERIRP*SCSGCC
Trigger: ACAGCAGCCTGAGCAGCTGCAGGGCCTGATCCTTTC...ATTTGATCTACTTTGTCTCTTCAAGATTGGTAGCTTTTCTTTGGGGTCATTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp ACCAATGACCCCAAAGAAAAGCTACCAATCTTGAAGAGACAAAGTAGATCAAATGCTCTGAATGTGCTCTaGCTGCTCCTGCTGAGCGGA +
Preference number: 4 (lower is better)
Translates to: TNDPKEKLPILKRQSRSNALNVL*LLLLSG
Trigger: TCCGCTCAGCAGGAGCAGGCAGAGCACATTCAGAGC...ATTTGATCTACTTTGTCTCTTCAAGATTGGTAGCTTTTCTTTGGGGTCATTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp CTACCTTCAGTACAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGAGTGCAGTTCAAAGCTaGTGGCTTTGGGGCGCTATG +
Preference number: 4 (lower is better)
Translates to: LPSVQLGQLYHTKIKFKRSAVQS*WLWGAM
Trigger: CATAGCGCCCCAAAGCCACCAGCTTTGAACTGCACT...CCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTGTACTGAAGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp AACCTATGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACAAGTGCAGTTCAAAGCTaGTGGCTTTGGGGCGCTATG +
Preference number: 4 (lower is better)
Translates to: NLCMSVCSKQDHTLWLWTSAVQS*WLWGAM
Trigger: CATAGCGCCCCAAAGCCACCAGCTTTGAACTGCACT...TGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCATAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp TCACAAGGGCCAATGCCAAGTCAGAGACACCCAGAAGATATTTACAAGATGGCTCTCTTGGCAGTACTCTaGTCATCTTCATCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: SQGPMPSQRHPEDIYKMALLAVL*SSSSPR
Trigger: TCTTGGAGATGAAGATGACCAGAGTACTGCCAAGAG...AGCCATCTTGTAAATATCTTCTGGGTGTCTCTGACTTGGCATTGGCCCTTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR CCA 90 bp AACCTATGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACAGTGTGCATCCTGGTATaGACCTGCAAGGAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: NLCMSVCSKQDHTLWLWTVCILV*TCKECF
Trigger: GAAGCACTCCTTGCAGGTCCATACCAGGATGCACAC...TGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCATAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp CTACCTTCAGTACAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGGTGTGCATCCTGGTATaGACCTGCAAGGAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LPSVQLGQLYHTKIKFKRVCILV*TCKECF
Trigger: GAAGCACTCCTTGCAGGTCCATACCAGGATGCACAC...CCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTGTACTGAAGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp CTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCGATTTCACAAGTAAATaGCTTCTCGCCTGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LGQLYHTKIKFKRWTLRGDFTSK*LLACVC
Trigger: ACACACACAGGCGAGAAGCCATTTACTTGTGAAATC...GCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080771.10
CDS-3UTR CCA 90 bp AACCTATGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACATGCCAGAAACACTGCTaGAGTCTGCCGTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: NLCMSVCSKQDHTLWLWTCQKHC*SLPCAS
Trigger: AGAAGCACACGGCAGACTCCAGCAGTGTTTCTGGCA...TGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCATAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp ACCAATGACCCCAAAGAAAAGCTACCAATCTTGAAGAGACAAAGTAGATCAAATCCTGCTCTCCCGACGTaGAGAGCTGGTATGGTTGCA +
Preference number: 4 (lower is better)
Translates to: TNDPKEKLPILKRQSRSNPALPT*RAGMVA
Trigger: TGCAACCATACCAGCTCTCCACGTCGGGAGAGCAGG...ATTTGATCTACTTTGTCTCTTCAAGATTGGTAGCTTTTCTTTGGGGTCATTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp AAGACCATACTCTATGGCTGTGGACATTCAACACTTATAGAAACATATAAAACCTGCTCCTGGTGGGCGTaGAGATGCTCCAGCGTTTCC +
Preference number: 4 (lower is better)
Translates to: KTILYGCGHSTLIETYKTCSWWA*RCSSVS
Trigger: GGAAACGCTGGAGCATCTCCACGCCCACCAGGAGCA...GGTTTTATATGTTTCTATAAGTGTTGAATGTCCACAGCCATAGAGTATGGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
3UTR CAA 72 bp AGCTTTCTTTTCTCACTCATGTATCCCAGGCCTGCCTaGCATCCAAGGATGACCTTGAATTTCGTCATCTTG +
Preference number: 4 (lower is better)
Translates to: SFLFSLMYPRPA*HPRMTLNFVIL
Trigger: CAAGATGACGAAATTCAAGGTCATCCTTGGATGCAAGGCAGGCCTGGGATACATGAGTGAGAAAAGAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR TCA 90 bp ACCAATGACCCCAAAGAAAAGCTACCAATCTTGAAGAGACAAAGTAGATCAAATCTCTGCAGCCAGTTCTaGTCTCCCTTCCTGCAAACC +
Preference number: 4 (lower is better)
Translates to: TNDPKEKLPILKRQSRSNLCSQF*SPFLQT
Trigger: GGTTTGCAGGAAGGGAGATCAGAACTGGCTGCAGAG...ATTTGATCTACTTTGTCTCTTCAAGATTGGTAGCTTTTCTTTGGGGTCATTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp ACCAATGACCCCAAAGAAAAGCTACCAATCTTGAAGAGACAAAGTAGATCAAATTCGGTGACAAGAAGCTaGATCTCCTGCTCTCCCGAC +
Preference number: 4 (lower is better)
Translates to: TNDPKEKLPILKRQSRSNSVTRS*ISCSPD
Trigger: GTCGGGAGAGCAGGAGATTCAGCTTCTTGTCACCGA...ATTTGATCTACTTTGTCTCTTCAAGATTGGTAGCTTTTCTTTGGGGTCATTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp ACCAATGACCCCAAAGAAAAGCTACCAATCTTGAAGAGACAAAGTAGATCAAATGTCAGCTGCAGGTACTaGGCTGGTTGTTTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: TNDPKEKLPILKRQSRSNVSCRY*AGCLLL
Trigger: CAGGAGCAAACAACCAGCTCAGTACCTGCAGCTGAC...ATTTGATCTACTTTGTCTCTTCAAGATTGGTAGCTTTTCTTTGGGGTCATTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp ATTACAGATAAGACAGTTTCTGCCCTGATGGAGCCCACGATAAAGAATGGCTGGTCTGATCTCCCTTCCTaGAAACCATTGGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ITDKTVSALMEPTIKNGWSDLPS*KPLAFL
Trigger: AAGAAAAGCCAATGGTTTGCAGGAAGGGAGATCAGA...CCAGCCATTCTTTATCGTGGGCTCCATCAGGGCAGAAACTGTCTTATCTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGCTGAAGGGAGCTCTTTaGTGTGAAAGATTTCCCACA +
Preference number: 4 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRLKGAL*CERFPT
Trigger: TGTGGGAAATCTTTCACAGCAAAGAGCTCCCTTCAG...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080771.10
CDS-3UTR GCA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGAGCATTTGCCACAGATaGTGCAGGAGTATGGCTTTT +
Preference number: 4 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRSICHR*CRSMAF
Trigger: AAAAGCCATACTCCTGCAGCATCTGTGGCAAATGCT...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp AACCTATGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACACTGGAGTCTGCCGTGTaGTTCTCTTTGCTGTGGATT +
Preference number: 4 (lower is better)
Translates to: NLCMSVCSKQDHTLWLWTLESAV*FSLLWI
Trigger: AATCCACAGCAAAGAGAAGCACACGGCAGACTCCAG...TGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCATAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp TGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACATTCAACCCTCGTCCACATTACTaGCAGAAACACTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: CMSVCSKQDHTLWLWTFNPRPHY*QKHCWS
Trigger: ACTCCAGCAGTGTTTCTGGCAGTAATGTGGACGAGG...GTTGAATGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp AACCTATGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACACCTCGTCCACATTACTaGCAGAAACACTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: NLCMSVCSKQDHTLWLWTPRPHY*QKHCWS
Trigger: ACTCCAGCAGTGTTTCTGGCAGTAATGTGGACGAGG...TGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCATAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp AACCTATGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACAGCTGAAGAATGTTCCTaGCCTCGTCCACATTACTGC +
Preference number: 4 (lower is better)
Translates to: NLCMSVCSKQDHTLWLWTAEECS*PRPHYC
Trigger: GCAGTAATGTGGACGAGGGCAGGAACATTCTTCAGC...TGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCATAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp TGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACATTCAACGCTGAAGAATGTTCCTaGCCTCGTCCACATTACTGC +
Preference number: 4 (lower is better)
Translates to: CMSVCSKQDHTLWLWTFNAEECS*PRPHYC
Trigger: GCAGTAATGTGGACGAGGGCAGGAACATTCTTCAGC...GTTGAATGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp AAGACCATACTCTATGGCTGTGGACATTCAACACTTATAGAAACATATAAAACCCCCCCGTGTGCATCCTaGTATGGACCTGCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: KTILYGCGHSTLIETYKTPPCAS*YGPARS
Trigger: ACTCCTTGCAGGTCCATACCAGGATGCACACGGGGG...GGTTTTATATGTTTCTATAAGTGTTGAATGTCCACAGCCATAGAGTATGGTCTT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp CTACCTTCAGTACAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGGATGCTGCAGGAGTATaGCTTTTCTCCTCGGTGGAT +
Preference number: 4 (lower is better)
Translates to: LPSVQLGQLYHTKIKFKRDAAGV*LFSSVD
Trigger: ATCCACCGAGGAGAAAAGCCATACTCCTGCAGCATC...CCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTGTACTGAAGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000080771.10
CDS-3UTR CCA 90 bp AACCTATGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACAGTCTCCTCTTGGCACTaGAGTCAGAGAAGCATTTGC +
Preference number: 4 (lower is better)
Translates to: NLCMSVCSKQDHTLWLWTVSSWH*SQRSIC
Trigger: GCAAATGCTTCTCTGACTCCAGTGCCAAGAGGAGAC...TGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCATAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp AAGACCATACTCTATGGCTGTGGACATTCAACACTTATAGAAACATATAAAACCCTGGTTGTTTGCTCCTaGTGGGCGTGGAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: KTILYGCGHSTLIETYKTLVVCS*WAWRCS
Trigger: GGAGCATCTCCACGCCCACCAGGAGCAAACAACCAG...GGTTTTATATGTTTCTATAAGTGTTGAATGTCCACAGCCATAGAGTATGGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp ACCAATGACCCCAAAGAAAAGCTACCAATCTTGAAGAGACAAAGTAGATCAAATGTCACTGTGAGTGTCTaGGTGTACCATAAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: TNDPKEKLPILKRQSRSNVTVSV*VYHKLP
Trigger: GGGCAGCTTATGGTACACTCAGACACTCACAGTGAC...ATTTGATCTACTTTGTCTCTTCAAGATTGGTAGCTTTTCTTTGGGGTCATTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp AACCTATGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACATATGCACAGAGTCGGTaGCAAGAAGCTGAATCTCCT +
Preference number: 4 (lower is better)
Translates to: NLCMSVCSKQDHTLWLWTYAQSR*QEAESP
Trigger: AGGAGATTCAGCTTCTTGTCACCGACTCTGTGCATA...TGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCATAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp CTACCTTCAGTACAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTATGCACAGAGTCGGTaGCAAGAAGCTGAATCTCCT +
Preference number: 4 (lower is better)
Translates to: LPSVQLGQLYHTKIKFKRYAQSR*QEAESP
Trigger: AGGAGATTCAGCTTCTTGTCACCGACTCTGTGCATA...CCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTGTACTGAAGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp AAGACCATACTCTATGGCTGTGGACATTCAACACTTATAGAAACATATAAAACCGTCAGCTGCAGGTACTaGGCTGGTTGTTTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: KTILYGCGHSTLIETYKTVSCRY*AGCLLL
Trigger: CAGGAGCAAACAACCAGCTCAGTACCTGCAGCTGAC...GGTTTTATATGTTTCTATAAGTGTTGAATGTCCACAGCCATAGAGTATGGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp TCTGTTCAAAGTCCCATAATTCAGGTTTTCAACATACGTAATCTCTGGGGAGCTCTGGAAGTCTGCGTATaGCTTTACCAGGTCATAGAC +
Preference number: 4 (lower is better)
Translates to: SVQSPIIQVFNIRNLWGALEVCV*LYQVID
Trigger: GTCTATGACCTGGTAAAGGCATACGCAGACTTCCAG...AGCTCCCCAGAGATTACGTATGTTGAAAACCTGAATTATGGGACTTTGAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR GCA 90 bp AAGACCATACTCTATGGCTGTGGACATTCAACACTTATAGAAACATATAAAACCTTGTTCACTCTCAGCTaGAGCTCTCCCTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: KTILYGCGHSTLIETYKTLFTLS*SSPSAA
Trigger: GGCTGCAGAGGGAGAGCTGCAGCTGAGAGTGAACAA...GGTTTTATATGTTTCTATAAGTGTTGAATGTCCACAGCCATAGAGTATGGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp AAGACCATACTCTATGGCTGTGGACATTCAACACTTATAGAAACATATAAAACCGGCTTCTTGCCCGTATaGAGGATGCAGTGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: KTILYGCGHSTLIETYKTGFLPV*RMQCLL
Trigger: GAGGAGACACTGCATCCTGCATACGGGCAAGAAGCC...GGTTTTATATGTTTCTATAAGTGTTGAATGTCCACAGCCATAGAGTATGGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp ATTACAGATAAGACAGTTTCTGCCCTGATGGAGCCCACGATAAAGAATGGCTGGCTGTCGTTTTCTCACTaGCATGTAGATAACCTGTAT +
Preference number: 4 (lower is better)
Translates to: ITDKTVSALMEPTIKNGWLSFSH*HVDNLY
Trigger: ATACAGGTTATCTACATGCCAGTGAGAAAACGACAG...CCAGCCATTCTTTATCGTGGGCTCCATCAGGGCAGAAACTGTCTTATCTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp ACCCAGAAGATATTTACAAGATGGCTAAACTATAAAGATGTCCACAGAACAGAGAGTGCAGTTCAAAGCTaGTGGCTTTGGGGCGCTATG +
Preference number: 4 (lower is better)
Translates to: TQKIFTRWLNYKDVHRTESAVQS*WLWGAM
Trigger: CATAGCGCCCCAAAGCCACCAGCTTTGAACTGCACT...CTCTGTTCTGTGGACATCTTTATAGTTTAGCCATCTTGTAAATATCTTCTGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR CCA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGTGCTTCTCTTTGCTGTaGATTTTCAAGTGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRCFSLL*IFKCAF
Trigger: GAAGGCACACTTGAAAATCCACAGCAAAGAGAAGCA...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp AACCTATGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACATTCCGCAAACATCATTaGGAAATACTCGCTACTGGC +
Preference number: 4 (lower is better)
Translates to: NLCMSVCSKQDHTLWLWTFRKHH*EILATG
Trigger: GCCAGTAGCGAGTATTTCTCAATGATGTTTGCGGAA...TGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCATAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp AGATGCACTATCCAATATGGTAGCCATCAGACCTATGTGGTTATTAAAACTTATCTCACCAGCAGGCTCTaGTTCCTTGTCTTCTGGAGT +
Preference number: 4 (lower is better)
Translates to: RCTIQYGSHQTYVVIKTYLTSRL*FLVFWS
Trigger: ACTCCAGAAGACAAGGAATCAGAGCCTGCTGGTGAG...ATAAGTTTTAATAACCACATAGGTCTGATGGCTACCATATTGGATAGTGCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR TCA 90 bp AAGACCATACTCTATGGCTGTGGACATTCAACACTTATAGAAACATATAAAACCATCCTGATGTGGGTCTaGAGGGAGCTCTTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: KTILYGCGHSTLIETYKTILMWV*RELFAV
Trigger: CACAGCAAAGAGCTCCCTTCAGACCCACATCAGGAT...GGTTTTATATGTTTCTATAAGTGTTGAATGTCCACAGCCATAGAGTATGGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080771.10
CDS-3UTR GCA 90 bp ACCAATGACCCCAAAGAAAAGCTACCAATCTTGAAGAGACAAAGTAGATCAAATGCAGTAGCCAGGATCTaGTCTGTCGTTTTCTCACTG +
Preference number: 4 (lower is better)
Translates to: TNDPKEKLPILKRQSRSNAVARI*SVVFSL
Trigger: CAGTGAGAAAACGACAGAGCAGATCCTGGCTACTGC...ATTTGATCTACTTTGTCTCTTCAAGATTGGTAGCTTTTCTTTGGGGTCATTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp ACCAATGACCCCAAAGAAAAGCTACCAATCTTGAAGAGACAAAGTAGATCAAATTTTGATCCTCCAGACTaGCCAGCACAGTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: TNDPKEKLPILKRQSRSNFDPPD*PAQCHC
Trigger: ACAGTGACACTGTGCTGGCCAGTCTGGAGGATCAAA...ATTTGATCTACTTTGTCTCTTCAAGATTGGTAGCTTTTCTTTGGGGTCATTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp CTACCTTCAGTACAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGCTCTTGGCAGTACTCTaGTCATCTTCATCTCCAAGA +
Preference number: 4 (lower is better)
Translates to: LPSVQLGQLYHTKIKFKRLLAVL*SSSSPR
Trigger: TCTTGGAGATGAAGATGACCAGAGTACTGCCAAGAG...CCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTGTACTGAAGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp ACCAATGACCCCAAAGAAAAGCTACCAATCTTGAAGAGACAAAGTAGATCAAATCCCCTGGCTGGGACCTaGCATGAAGTTAATGTTATG +
Preference number: 4 (lower is better)
Translates to: TNDPKEKLPILKRQSRSNPLAGT*HEVNVM
Trigger: CATAACATTAACTTCATGCCAGGTCCCAGCCAGGGG...ATTTGATCTACTTTGTCTCTTCAAGATTGGTAGCTTTTCTTTGGGGTCATTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp AAGACCATACTCTATGGCTGTGGACATTCAACACTTATAGAAACATATAAAACCTGTGATGACATGCACTaGCTCAGTCTGGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: KTILYGCGHSTLIETYKTCDDMH*LSLGGL
Trigger: GAGTCCTCCCAGACTGAGCCAGTGCATGTCATCACA...GGTTTTATATGTTTCTATAAGTGTTGAATGTCCACAGCCATAGAGTATGGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp AAGACCATACTCTATGGCTGTGGACATTCAACACTTATAGAAACATATAAAACCAAAAGACTTCTGTCCTaGGTGCAGGCTCATGTGCTC +
Preference number: 4 (lower is better)
Translates to: KTILYGCGHSTLIETYKTKRLLS*VQAHVL
Trigger: GAGCACATGAGCCTGCACTCAGGACAGAAGTCTTTT...GGTTTTATATGTTTCTATAAGTGTTGAATGTCCACAGCCATAGAGTATGGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp AAGACCATACTCTATGGCTGTGGACATTCAACACTTATAGAAACATATAAAACCGATGCCAAAGGTGTCTaGAACCATGCCTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: KTILYGCGHSTLIETYKTDAKGV*NHAFQH
Trigger: ATGCTGGAAGGCATGGTTGCAGACACCTTTGGCATC...GGTTTTATATGTTTCTATAAGTGTTGAATGTCCACAGCCATAGAGTATGGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp AGATGCACTATCCAATATGGTAGCCATCAGACCTATGTGGTTATTAAAACTTATGCAGTAGCCAGGATCTaGTCTGTCGTTTTCTCACTG +
Preference number: 4 (lower is better)
Translates to: RCTIQYGSHQTYVVIKTYAVARI*SVVFSL
Trigger: CAGTGAGAAAACGACAGAGCAGATCCTGGCTACTGC...ATAAGTTTTAATAACCACATAGGTCTGATGGCTACCATATTGGATAGTGCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR GCA 90 bp ACCAATGACCCCAAAGAAAAGCTACCAATCTTGAAGAGACAAAGTAGATCAAATGTTATCCTGGAAGTCTaGGTATGCCTTTACCAGGTC +
Preference number: 4 (lower is better)
Translates to: TNDPKEKLPILKRQSRSNVILEV*VCLYQV
Trigger: GACCTGGTAAAGGCATACGCAGACTTCCAGGATAAC...ATTTGATCTACTTTGTCTCTTCAAGATTGGTAGCTTTTCTTTGGGGTCATTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp ATTACAGATAAGACAGTTTCTGCCCTGATGGAGCCCACGATAAAGAATGGCTGGTTTAGCTGTCTTTTCTaGCTGAAATATTTTCCACAC +
Preference number: 4 (lower is better)
Translates to: ITDKTVSALMEPTIKNGWFSCLF*LKYFPH
Trigger: GTGTGGAAAATATTTCAGCCAGAAAAGACAGCTAAA...CCAGCCATTCTTTATCGTGGGCTCCATCAGGGCAGAAACTGTCTTATCTGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp CTACCTTCAGTACAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGCTTCTCTTTGCTGTaGATTTTCAAGTGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LPSVQLGQLYHTKIKFKRCFSLL*IFKCAF
Trigger: GAAGGCACACTTGAAAATCCACAGCAAAGAGAAGCA...CCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTGTACTGAAGGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR TCA 90 bp AAGACCATACTCTATGGCTGTGGACATTCAACACTTATAGAAACATATAAAACCAGCACAGTGTCACTGTaGGTGTCTGAGTGTACCATA +
Preference number: 4 (lower is better)
Translates to: KTILYGCGHSTLIETYKTSTVSL*VSECTI
Trigger: TATGGTACACTCAGACACTCACAGTGACACTGTGCT...GGTTTTATATGTTTCTATAAGTGTTGAATGTCCACAGCCATAGAGTATGGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp TGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACATTCAACTTATGGGCTCGGAAATaGACATTCTCCACGATTAAA +
Preference number: 4 (lower is better)
Translates to: CMSVCSKQDHTLWLWTFNLWARK*TFSTIK
Trigger: TTTAATCGTGGAGAATGTGCATTTCCGAGCCCATAA...GTTGAATGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp AAGACCATACTCTATGGCTGTGGACATTCAACACTTATAGAAACATATAAAACCCTGGAAGTCTGCGTATaGCTTTACCAGGTCATAGAC +
Preference number: 4 (lower is better)
Translates to: KTILYGCGHSTLIETYKTLEVCV*LYQVID
Trigger: GTCTATGACCTGGTAAAGGCATACGCAGACTTCCAG...GGTTTTATATGTTTCTATAAGTGTTGAATGTCCACAGCCATAGAGTATGGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp ACCAATGACCCCAAAGAAAAGCTACCAATCTTGAAGAGACAAAGTAGATCAAATATTTGCCACAGATGCTaGAGGAGTATGGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: TNDPKEKLPILKRQSRSNICHRC*RSMAFL
Trigger: GAGAAAAGCCATACTCCTGCAGCATCTGTGGCAAAT...ATTTGATCTACTTTGTCTCTTCAAGATTGGTAGCTTTTCTTTGGGGTCATTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp TGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACATTCAACCTGTCGTTTTCTCACTaGCATGTAGATAACCTGTAT +
Preference number: 4 (lower is better)
Translates to: CMSVCSKQDHTLWLWTFNLSFSH*HVDNLY
Trigger: ATACAGGTTATCTACATGCCAGTGAGAAAACGACAG...GTTGAATGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp ACCAATGACCCCAAAGAAAAGCTACCAATCTTGAAGAGACAAAGTAGATCAAATTTATGGGCTCGGAAATaGACATTCTCCACGATTAAA +
Preference number: 4 (lower is better)
Translates to: TNDPKEKLPILKRQSRSNLWARK*TFSTIK
Trigger: TTTAATCGTGGAGAATGTGCATTTCCGAGCCCATAA...ATTTGATCTACTTTGTCTCTTCAAGATTGGTAGCTTTTCTTTGGGGTCATTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR GCA 90 bp AAGACCATACTCTATGGCTGTGGACATTCAACACTTATAGAAACATATAAAACCTCTGATCTCCCTTCCTaGAAACCATTGGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: KTILYGCGHSTLIETYKTSDLPS*KPLAFL
Trigger: AAGAAAAGCCAATGGTTTGCAGGAAGGGAGATCAGA...GGTTTTATATGTTTCTATAAGTGTTGAATGTCCACAGCCATAGAGTATGGTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CCA 90 bp ACCAATGACCCCAAAGAAAAGCTACCAATCTTGAAGAGACAAAGTAGATCAAATTTTAGCTGTCTTTTCTaGCTGAAATATTTTCCACAC +
Preference number: 4 (lower is better)
Translates to: TNDPKEKLPILKRQSRSNFSCLF*LKYFPH
Trigger: GTGTGGAAAATATTTCAGCCAGAAAAGACAGCTAAA...ATTTGATCTACTTTGTCTCTTCAAGATTGGTAGCTTTTCTTTGGGGTCATTGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS TCA 90 bp GGAGGGGACAGGGGTGGCTCGGGCTCCTGTGTCAGCTGCAGGTACTaGGCTGGTTGTTTGCTCCTGGTGGGCGTGGAGATGCTCCAGCGT +
Preference number: 5 (lower is better)
Translates to: GGDRGGSGSCVSCRY*AGCLLLVGVEMLQR
Trigger: ACGCTGGAGCATCTCCACGCCCACCAGGAGCAAACAACCAGCTCAGTACCTGCAGCTGACACAGGAGCCCGAGCCACCCCTGTCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CCA 90 bp GGACAGGGGTGGCTCGGGCTCCTGTGTCAGCTGCAGGTACTGAGCTaGTTGTTTGCTCCTGGTGGGCGTGGAGATGCTCCAGCGTTTCCT +
Preference number: 5 (lower is better)
Translates to: GQGWLGLLCQLQVLS*LFAPGGRGDAPAFP
Trigger: AGGAAACGCTGGAGCATCTCCACGCCCACCAGGAGCAAACAACCAGCTCAGTACCTGCAGCTGACACAGGAGCCCGAGCCACCCCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CCA 90 bp TCCGCCTGCTGCACCTACTCTGGCTCTCCTGTCCATCCCCAGCCTTaGGGTCAAAGTTCTCGTCCTTTTCAGCAGGCACCTCCTCCACGC +
Preference number: 5 (lower is better)
Translates to: SACCTYSGSPVHPQP*GQSSRPFQQAPPPR
Trigger: GCGTGGAGGAGGTGCCTGCTGAAAAGGACGAGAACTTTGACCCCAAGGCTGGGGATGGACAGGAGAGCCAGAGTAGGTGCAGCAGGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
ENSMUST00000216656.2
CDS CCA 90 bp GTGGCCATGCTCTGGGGGCTCTCGGCAGCCACGATGCTGACCCCCTaGCTGGGACCTGGCATGAAGTTAATGTTATGCACAGAGTCGGTG +
Preference number: 5 (lower is better)
Translates to: VAMLWGLSAATMLTP*LGPGMKLMLCTESV
Trigger: CACCGACTCTGTGCATAACATTAACTTCATGCCAGGTCCCAGCCAGGGGGTCAGCATCGTGGCTGCCGAGAGCCCCCAGAGCATGGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS GCA 90 bp GGACTCCATCTGGCCTCCAATCACACTGAGGCTCTGAATGTGCTCTaGCTGCTCCTGCTGAGCGGAAAGGATCAGGCCCTGCAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: GLHLASNHTEALNVL*LLLLSGKDQALQLL
Trigger: GAGCAGCTGCAGGGCCTGATCCTTTCCGCTCAGCAGGAGCAGGCAGAGCACATTCAGAGCCTCAGTGTGATTGGAGGCCAGATGGAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS TCA 90 bp GCACTGGCTCAGTCTGGGAGGACTCCATCTGGCCTCCAATCACACTaGGGCTCTGAATGTGCTCTGCCTGCTCCTGCTGAGCGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: ALAQSGRTPSGLQSH*GSECALPAPAERKG
Trigger: TCCTTTCCGCTCAGCAGGAGCAGGCAGAGCACATTCAGAGCCTCAGTGTGATTGGAGGCCAGATGGAGTCCTCCCAGACTGAGCCAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS TCA 90 bp TTCAGCAGGCACCTCCTCCACGCTTCCTGGCTCACCAGCAGGCTCTaGTTCCTTGTCTTCTGGAGTCTGCTCACTCAGCTTGACACTGTC +
Preference number: 5 (lower is better)
Translates to: FSRHLLHASWLTSRL*FLVFWSLLTQLDTV
Trigger: GACAGTGTCAAGCTGAGTGAGCAGACTCCAGAAGACAAGGAATCAGAGCCTGCTGGTGAGCCAGGAAGCGTGGAGGAGGTGCCTGCTGAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
ENSMUST00000216656.2
CDS GCA 90 bp CTCCCGACGTGGAGAGCTGGTATGGTTGCAGCTGAAGAATGTTCCTaGCCTCGTCCACATTACTGCCAGAAACACTGCTGGAGTCTGCCG +
Preference number: 5 (lower is better)
Translates to: LPTWRAGMVAAEECS*PRPHYCQKHCWSLP
Trigger: CGGCAGACTCCAGCAGTGTTTCTGGCAGTAATGTGGACGAGGGCAGGAACATTCTTCAGCTGCAACCATACCAGCTCTCCACGTCGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp CCAAGGATGACCTTGAATTTCGTCATCTTGCCCAGTGGTGTGGGGAGGGAAGCCTGTCCATCCCCAGCCTaGGGGTCAAAGTTCTCGTCC +
Preference number: 5 (lower is better)
Translates to: PRMTLNFVILPSGVGREACPSPA*GSKFSS
Trigger: GGACGAGAACTTTGACCCCAAGGCTGGGGATGGACA...GGCTTCCCTCCCCACACCACTGGGCAAGATGACGAAATTCAAGGTCATCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS GCA 90 bp TGGGCGTGGAGATGCTCCAGCGTTTCCTTGGAAAGTGTGATGACATaGACTGGCTCAGTCTGGGAGGACTCCATCTGGCCTCCAATCACA +
Preference number: 5 (lower is better)
Translates to: WAWRCSSVSLESVMT*TGSVWEDSIWPPIT
Trigger: TGTGATTGGAGGCCAGATGGAGTCCTCCCAGACTGAGCCAGTGCATGTCATCACACTTTCCAAGGAAACGCTGGAGCATCTCCACGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS GCA 90 bp GCTGCAGGTACTGAGCTGGTTGTTTGCTCCTGGTGGGCGTGGAGATaGTCCAGCGTTTCCTTGGAAAGTGTGATGACATGCACTGGCTCA +
Preference number: 5 (lower is better)
Translates to: AAGTELVVCSWWAWR*SSVSLESVMTCTGS
Trigger: TGAGCCAGTGCATGTCATCACACTTTCCAAGGAAACGCTGGAGCATCTCCACGCCCACCAGGAGCAAACAACCAGCTCAGTACCTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CCA 90 bp GTCCGCAGGTGCTTCTTCAGCTGGGACACGTCCATAAACTTTCGGTaGCAGTGGCTGCATTCTGGTAGTGAGTGGCCTGTATGGACACGA +
Preference number: 5 (lower is better)
Translates to: VRRCFFSWDTSINFR*QWLHSGSEWPVWTR
Trigger: TCGTGTCCATACAGGCCACTCACTACCAGAATGCAGCCACTGCCACCGAAAGTTTATGGACGTGTCCCAGCTGAAGAAGCACCTGCGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080771.10
CDS-3UTR CAA 90 bp CTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCTTGGTGGTCAGCGCCTaGCCGCACACGGTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: LGQLYHTKIKFKRWTLRGLVVSA*PHTVQV
Trigger: CACCTGCACCGTGTGCGGCAAGGCGCTGACCACCAA...GCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS GCA 90 bp GCAGGATGCAGTGTCTCCTCTTGGCACTGGAGTCAGAGAAGCATTTaGCACAGATGCTGCAGGAGTATGGCTTTTCTCCTCGGTGGATCC +
Preference number: 5 (lower is better)
Translates to: AGCSVSSWHWSQRSI*HRCCRSMAFLLGGS
Trigger: GGATCCACCGAGGAGAAAAGCCATACTCCTGCAGCATCTGTGGCAAATGCTTCTCTGACTCCAGTGCCAAGAGGAGACACTGCATCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080771.10
CDS GCA 90 bp GATGCTGCAGGAGTATGGCTTTTCTCCTCTGTGTGTGTCCGCAGGTaGTTCTTCAGCTGGGACACGTCCATAAACTTTCGGTGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: DAAGVWLFSSVCVRR*FFSWDTSINFRWQW
Trigger: CCACTGCCACCGAAAGTTTATGGACGTGTCCCAGCTGAAGAAGCACCTGCGGACACACACAGAGGAGAAAAGCCATACTCCTGCAGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213797.2
CDS CCA 90 bp AGGGCTTCTTGCCCGTATGCAGGATGCAGTGTCTCCTCTTGGCACTaGAGTCAGAGAAGCATTTGCCACAGATGCTGCAGGAGTATGGCT +
Preference number: 5 (lower is better)
Translates to: RASCPYAGCSVSSWH*SQRSICHRCCRSMA
Trigger: AGCCATACTCCTGCAGCATCTGTGGCAAATGCTTCTCTGACTCCAGTGCCAAGAGGAGACACTGCATCCTGCATACGGGCAAGAAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CCA 90 bp GTGGAGATGCTCCAGCGTTTCCTTGGAAAGTGTGATGACATGCACTaGCTCAGTCTGGGAGGACTCCATCTGGCCTCCAATCACACTGAG +
Preference number: 5 (lower is better)
Translates to: VEMLQRFLGKCDDMH*LSLGGLHLASNHTE
Trigger: CTCAGTGTGATTGGAGGCCAGATGGAGTCCTCCCAGACTGAGCCAGTGCATGTCATCACACTTTCCAAGGAAACGCTGGAGCATCTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp CCAAGGATGACCTTGAATTTCGTCATCTTGCCCAGTGGTGTGGGGAGGGAAGCCGCAGGCTCTGATTCCTaGTCTTCTGGAGTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: PRMTLNFVILPSGVGREAAGSDS*SSGVCS
Trigger: TGAGCAGACTCCAGAAGACAAGGAATCAGAGCCTGC...GGCTTCCCTCCCCACACCACTGGGCAAGATGACGAAATTCAAGGTCATCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR CAA 90 bp GGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCAAATCCAGCAGGGAGTGCTaGGTGGTCAGCGCCTTGCCG +
Preference number: 5 (lower is better)
Translates to: GQLYHTKIKFKRWTLRGKSSREC*VVSALP
Trigger: CGGCAAGGCGCTGACCACCAAGCACTCCCTGCTGGA...TTTGCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp GGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCAAAGTGAGCAGGGTGATGTaGGCAGCCGGGTCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: GQLYHTKIKFKRWTLRGKVSRVM*AAGSVA
Trigger: GGCCACAGACCCGGCTGCCAACATCACCCTGCTCAC...TTTGCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp ATTACAGATAAGACAGTTTCTGCCCTGATGGAGCCCACGATAAAGAATGGCTGGAACGGCCAGAGGCGCTaGGGTCAGCTCTGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: ITDKTVSALMEPTIKNGWNGQRR*GQLCSW
Trigger: CCAGGAGCAGAGCTGACCCAAGCGCCTCTGGCCGTT...CCAGCCATTCTTTATCGTGGGCTCCATCAGGGCAGAAACTGTCTTATCTGTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CCA 90 bp AATAACCACCACTGGCGTCCCAGTGCAGTTCAAAGCTGGTGGCTTTaGGGCGCTATGGTTATCCTGGAAGTCTGCGTATGCCTTTACCAG +
Preference number: 5 (lower is better)
Translates to: NNHHWRPSAVQSWWL*GAMVILEVCVCLYQ
Trigger: CTGGTAAAGGCATACGCAGACTTCCAGGATAACCATAGCGCCCCAAAGCCACCAGCTTTGAACTGCACTGGGACGCCAGTGGTGGTTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
ENSMUST00000216656.2
CDS CCA 90 bp CGTCCCAACCACAATTCCAAACTCCCCAACCAATCGCACCACGTCTaGAAATCGAAGTTACCCGTGTGGCGTCTCTGGTGGATTGCTAAG +
Preference number: 5 (lower is better)
Translates to: RPNHNSKLPNQSHHV*KSKLPVWRLWWIAK
Trigger: CTTAGCAATCCACCAGAGACGCCACACGGGTAACTTCGATTTCCAGACGTGGTGCGATTGGTTGGGGAGTTTGGAATTGTGGTTGGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR CAA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGTGAGCAGGGTGATGTaGGCAGCCGGGTCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRVSRVM*AAGSVA
Trigger: GGCCACAGACCCGGCTGCCAACATCACCCTGCTCAC...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS TCA 90 bp AAGGGTCGTTCCCCCGTGTGGCGTCTCTGGTGGATTGCTAAGAAGTaGCTATATTTAAAGACTCTGTCGCAGTCTTTACACCGGGCCTCG +
Preference number: 5 (lower is better)
Translates to: KGRSPVWRLWWIAKK*LYLKTLSQSLHRAS
Trigger: CGAGGCCCGGTGTAAAGACTGCGACAGAGTCTTTAAATATAGTCACTTCTTAGCAATCCACCAGAGACGCCACACGGGGGAACGACCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS TCA 90 bp CCTGGCATGAAGTTAATGTTATGCACAGAGTCGGTGACAAGAAGCTaGATCTCCTGCTCTCCCGACGTGGAGAGCTGGTATGGTTGCAGC +
Preference number: 5 (lower is better)
Translates to: PGMKLMLCTESVTRS*ISCSPDVESWYGCS
Trigger: GCTGCAACCATACCAGCTCTCCACGTCGGGAGAGCAGGAGATTCAGCTTCTTGTCACCGACTCTGTGCATAACATTAACTTCATGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS GCA 90 bp GCAGGATGCAGTGTCTCCTCTTGGCACTGGAGTCAGAGAAGCATTTaGCACAGATGCTGCAGGAGTATGGCTTTTCTCCTCTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: AGCSVSSWHWSQRSI*HRCCRSMAFLLCVC
Trigger: ACACACACAGAGGAGAAAAGCCATACTCCTGCAGCATCTGTGGCAAATGCTTCTCTGACTCCAGTGCCAAGAGGAGACACTGCATCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213797.2
CDS CCA 90 bp CTTATTGGAAATAACCACCACTGGCGTCCCAGTGCAGTTCAAAGCTaGTGGCTTTGGGGCGCTATGGTTATCCTGGAAGTCTGCGTATGC +
Preference number: 5 (lower is better)
Translates to: LIGNNHHWRPSAVQS*WLWGAMVILEVCVC
Trigger: GCATACGCAGACTTCCAGGATAACCATAGCGCCCCAAAGCCACCAGCTTTGAACTGCACTGGGACGCCAGTGGTGGTTATTTCCAATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
ENSMUST00000216656.2
CDS-3UTR CAA 90 bp CTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCTGTCCATCCCCAGCCTaGGGGTCAAAGTTCTCGTCC +
Preference number: 5 (lower is better)
Translates to: LGQLYHTKIKFKRWTLRGCPSPA*GSKFSS
Trigger: GGACGAGAACTTTGACCCCAAGGCTGGGGATGGACA...GCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp TGGGAGGCAGAGGCAGAAGCAGGTAGATTTCTGAGTTCGAGGCCAGCCTGGTCTGGCGTCTCTGGTGGATaGCTAAGAAGTGACTATATT +
Preference number: 5 (lower is better)
Translates to: WEAEAEAGRFLSSRPAWSGVSGG*LRSDYI
Trigger: AATATAGTCACTTCTTAGCAATCCACCAGAGACGCC...AGACCAGGCTGGCCTCGAACTCAGAAATCTACCTGCTTCTGCCTCTGCCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS GCA 90 bp GTTCCTGCCCTCGTCCACATTACTGCCAGAAACACTGCTGGAGTCTaGCGTGTGCTTCTCTTTGCTGTGGATTTTCAAGTGTGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: VPALVHITARNTAGV*RVLLFAVDFQVCLQ
Trigger: TTGAAGGCACACTTGAAAATCCACAGCAAAGAGAAGCACACGGCAGACTCCAGCAGTGTTTCTGGCAGTAATGTGGACGAGGGCAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CCA 90 bp CAATCTCGCCCTCTTCCGCAAACATCATTGAGAAATACTCGCTACTaGCGGCCAGCAAGGCTTTATGGGCTCGGAAATGCACATTCTCCA +
Preference number: 5 (lower is better)
Translates to: QSRPLPQTSLRNTRY*RPARLYGLGNAHSP
Trigger: TGGAGAATGTGCATTTCCGAGCCCATAAAGCCTTGCTGGCCGCCAGTAGCGAGTATTTCTCAATGATGTTTGCGGAAGAGGGCGAGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
ENSMUST00000216656.2
CDS CCA 90 bp AGGTGCTTCTTCAGCTGGGACACGTCCATAAACTTTCGGTGGCAGTaGCTGCATTCTGGTAGTGAGTGGCCTTATTGGTATCGTACCTGT +
Preference number: 5 (lower is better)
Translates to: RCFFSWDTSINFRWQ*LHSGSEWPYWYRTC
Trigger: ACAGGTACGATACCAATAAGGCCACTCACTACCAGAATGCAGCCACTGCCACCGAAAGTTTATGGACGTGTCCCAGCTGAAGAAGCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp CTACCTTCAGTACAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTTGGTGGTCAGCGCCTaGCCGCACACGGTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: LPSVQLGQLYHTKIKFKRLVVSA*PHTVQV
Trigger: CACCTGCACCGTGTGCGGCAAGGCGCTGACCACCAA...CCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTGTACTGAAGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp CTACCTTCAGTACAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTCCAGCAGGGAGTGCTaGGTGGTCAGCGCCTTGCCG +
Preference number: 5 (lower is better)
Translates to: LPSVQLGQLYHTKIKFKRSSREC*VVSALP
Trigger: CGGCAAGGCGCTGACCACCAAGCACTCCCTGCTGGA...CCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTGTACTGAAGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS GCA 90 bp GCTGAAGAATGTTCCTGCCCTCGTCCACATTACTGCCAGAAACACTaGTGGAGTCTGCCGTGTGCTTCTCTTTGCTGTGGATTTTCAAGT +
Preference number: 5 (lower is better)
Translates to: AEECSCPRPHYCQKH*WSLPCASLCCGFSS
Trigger: ACTTGAAAATCCACAGCAAAGAGAAGCACACGGCAGACTCCAGCAGTGTTTCTGGCAGTAATGTGGACGAGGGCAGGAACATTCTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CCA 90 bp TTTCCGTTTCAGAGGATCGTTCTTCTTATTGGAAATAACCACCACTaGCGTCCCAGTGCAGTTCAAAGCTGGTGGCTTTGGGGCGCTATG +
Preference number: 5 (lower is better)
Translates to: FPFQRIVLLIGNNHH*RPSAVQSWWLWGAM
Trigger: CATAGCGCCCCAAAGCCACCAGCTTTGAACTGCACTGGGACGCCAGTGGTGGTTATTTCCAATAAGAAGAACGATCCTCTGAAACGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
ENSMUST00000216656.2
CDS-3UTR CAA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGTGTCCATCCCCAGCCTaGGGGTCAAAGTTCTCGTCC +
Preference number: 5 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRCPSPA*GSKFSS
Trigger: GGACGAGAACTTTGACCCCAAGGCTGGGGATGGACA...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp TGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACATTCAACGCCACCCTGCCACTGTaGCTCCAGGGGAAGGGTCTA +
Preference number: 5 (lower is better)
Translates to: CMSVCSKQDHTLWLWTFNATLPL*LQGKGL
Trigger: TAGACCCTTCCCCTGGAGCAACAGTGGCAGGGTGGC...GTTGAATGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS TCA 90 bp CTGCAGGAGTATGGCTTTTCTCCTCGGTGGATCCTGATGTGGGTCTaGAGGGAGCTCTTTGCTGTGAAAGATTTCCCACAGATTTCACAA +
Preference number: 5 (lower is better)
Translates to: LQEYGFSPRWILMWV*RELFAVKDFPQISQ
Trigger: TTGTGAAATCTGTGGGAAATCTTTCACAGCAAAGAGCTCCCTTCAGACCCACATCAGGATCCACCGAGGAGAAAAGCCATACTCCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080771.10
CDS-3UTR CAA 90 bp GGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGGCAAAGCAGGCTCTGATTCCTaGTCTTCTGGAGTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: GQLYHTKIKFKRWTLRGKAGSDS*SSGVCS
Trigger: TGAGCAGACTCCAGAAGACAAGGAATCAGAGCCTGC...TTTGCCCCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS TCA 90 bp AAATCGAAGTTACCCGTGTGGCGTCTCTGGTGGATTGCTAAGAAGTaGCTATATTTAAAGACTCTGTCGCAGTCTTTACACCGGGCCTCG +
Preference number: 5 (lower is better)
Translates to: KSKLPVWRLWWIAKK*LYLKTLSQSLHRAS
Trigger: CGAGGCCCGGTGTAAAGACTGCGACAGAGTCTTTAAATATAGTCACTTCTTAGCAATCCACCAGAGACGCCACACGGGTAACTTCGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS CCA 90 bp ACGTCCATAAACTTTCGGTGGCAGTGGCTGCATTCTGGTAGTGAGTaGCCTTATTGGTATCGTACCTGTATGGACACGATAATGGCTCTT +
Preference number: 5 (lower is better)
Translates to: TSINFRWQWLHSGSE*PYWYRTCMDTIMAL
Trigger: AAGAGCCATTATCGTGTCCATACAGGTACGATACCAATAAGGCCACTCACTACCAGAATGCAGCCACTGCCACCGAAAGTTTATGGACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGCAGGCTCTGATTCCTaGTCTTCTGGAGTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRAGSDS*SSGVCS
Trigger: TGAGCAGACTCCAGAAGACAAGGAATCAGAGCCTGC...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGGAGTCAGAGAAGCATTaGCCACAGATGCTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRESEKH*PQMLQE
Trigger: CTCCTGCAGCATCTGTGGCAAATGCTTCTCTGACTC...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp AAGACCATACTCTATGGCTGTGGACATTCAACACTTATAGAAACATATAAAACCAACGGCCAGAGGCGCTaGGGTCAGCTCTGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: KTILYGCGHSTLIETYKTNGQRR*GQLCSW
Trigger: CCAGGAGCAGAGCTGACCCAAGCGCCTCTGGCCGTT...GGTTTTATATGTTTCTATAAGTGTTGAATGTCCACAGCCATAGAGTATGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp ACCAATGACCCCAAAGAAAAGCTACCAATCTTGAAGAGACAAAGTAGATCAAATGCCACCCTGCCACTGTaGCTCCAGGGGAAGGGTCTA +
Preference number: 5 (lower is better)
Translates to: TNDPKEKLPILKRQSRSNATLPL*LQGKGL
Trigger: TAGACCCTTCCCCTGGAGCAACAGTGGCAGGGTGGC...ATTTGATCTACTTTGTCTCTTCAAGATTGGTAGCTTTTCTTTGGGGTCATTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS GCA 90 bp CTTCCTGGCTCACCAGCAGGCTCTGATTCCTTGTCTTCTGGAGTCTaGTCACTCAGCTTGACACTGTCTTCTTCTTTAAACACAAAGTTT +
Preference number: 5 (lower is better)
Translates to: LPGSPAGSDSLSSGV*SLSLTLSSSLNTKF
Trigger: AAACTTTGTGTTTAAAGAAGAAGACAGTGTCAAGCTGAGTGAGCAGACTCCAGAAGACAAGGAATCAGAGCCTGCTGGTGAGCCAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
ENSMUST00000216656.2
CDS GCA 90 bp AAATACTCGCTACTGGCGGCCAGCAAGGCTTTATGGGCTCGGAAATaGACATTCTCCACGATTAAAGTAATATCACAAAGAAAGCCCTTC +
Preference number: 5 (lower is better)
Translates to: KYSLLAASKALWARK*TFSTIKVISQRKPF
Trigger: GAAGGGCTTTCTTTGTGATATTACTTTAATCGTGGAGAATGTGCATTTCCGAGCCCATAAAGCCTTGCTGGCCGCCAGTAGCGAGTATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
ENSMUST00000216656.2
CDS-3UTR CAA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGAACCATTGGCTTTTCTaGGTCTTCCCCGTTTCCGTT +
Preference number: 5 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRNHWLF*VFPVSV
Trigger: AACGGAAACGGGGAAGACCAAGAAAAGCCAATGGTT...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp ATTACAGATAAGACAGTTTCTGCCCTGATGGAGCCCACGATAAAGAATGGCTGGGTCTGCTCACTCAGCTaGACACTGTCTTCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: ITDKTVSALMEPTIKNGWVCSLS*TLSSSL
Trigger: TAAAGAAGAAGACAGTGTCAAGCTGAGTGAGCAGAC...CCAGCCATTCTTTATCGTGGGCTCCATCAGGGCAGAAACTGTCTTATCTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp CTACCTTCAGTACAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGATGCAGTGTCTCCTCTaGGCACTGGAGTCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: LPSVQLGQLYHTKIKFKRMQCLL*ALESEK
Trigger: CTTCTCTGACTCCAGTGCCAAGAGGAGACACTGCAT...CCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTGTACTGAAGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp CAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGTGGACTCTGAGGCTTCCGCAAACATCATaGAGAAATACTCGCTACTGG +
Preference number: 5 (lower is better)
Translates to: QLGQLYHTKIKFKRWTLRLPQTS*RNTRYW
Trigger: CCAGTAGCGAGTATTTCTCAATGATGTTTGCGGAAG...CCTCAGAGTCCACCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp TGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACATTCAACGGAGAGCTGGTATGGTaGCAGCTGAAGAATGTTCCT +
Preference number: 5 (lower is better)
Translates to: CMSVCSKQDHTLWLWTFNGELVW*QLKNVP
Trigger: AGGAACATTCTTCAGCTGCAACCATACCAGCTCTCC...GTTGAATGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp AACCTATGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACATGCTCCAGCGTTTCCTaGGAAAGTGTGATGACATGC +
Preference number: 5 (lower is better)
Translates to: NLCMSVCSKQDHTLWLWTCSSVS*ESVMTC
Trigger: GCATGTCATCACACTTTCCAAGGAAACGCTGGAGCA...TGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCATAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CCA 90 bp AACATCATTGAGAAATACTCGCTACTGGCGGCCAGCAAGGCTTTATaGGCTCGGAAATGCACATTCTCCACGATTAAAGTAATATCACAA +
Preference number: 5 (lower is better)
Translates to: NIIEKYSLLAASKAL*ARKCTFSTIKVISQ
Trigger: TTGTGATATTACTTTAATCGTGGAGAATGTGCATTTCCGAGCCCATAAAGCCTTGCTGGCCGCCAGTAGCGAGTATTTCTCAATGATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
ENSMUST00000216656.2
CDS-3UTR CAA 90 bp CTAGCACTTAGATTTAAGCTTGTGACAATTAGAACCCGAGCTGACCTGAAACAGCTTCCGCAAACATCATaGAGAAATACTCGCTACTGG +
Preference number: 5 (lower is better)
Translates to: LALRFKLVTIRTRADLKQLPQTS*RNTRYW
Trigger: CCAGTAGCGAGTATTTCTCAATGATGTTTGCGGAAG...CTGTTTCAGGTCAGCTCGGGTTCTAATTGTCACAAGCTTAAATCTAAGTGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR CAA 90 bp CTACCTTCAGTACAACTTGGTCAGCTGTACCACACAAAGATAAAATTCAAGAGGAACCATTGGCTTTTCTaGGTCTTCCCCGTTTCCGTT +
Preference number: 5 (lower is better)
Translates to: LPSVQLGQLYHTKIKFKRNHWLF*VFPVSV
Trigger: AACGGAAACGGGGAAGACCAAGAAAAGCCAATGGTT...CCTCTTGAATTTTATCTTTGTGTGGTACAGCTGACCAAGTTGTACTGAAGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp ACCAATGACCCCAAAGAAAAGCTACCAATCTTGAAGAGACAAAGTAGATCAAATGAGTCAGAGAAGCATTaGCCACAGATGCTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: TNDPKEKLPILKRQSRSNESEKH*PQMLQE
Trigger: CTCCTGCAGCATCTGTGGCAAATGCTTCTCTGACTC...ATTTGATCTACTTTGTCTCTTCAAGATTGGTAGCTTTTCTTTGGGGTCATTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp ACCAATGACCCCAAAGAAAAGCTACCAATCTTGAAGAGACAAAGTAGATCAAATATGCAGTGTCTCCTCTaGGCACTGGAGTCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: TNDPKEKLPILKRQSRSNMQCLL*ALESEK
Trigger: CTTCTCTGACTCCAGTGCCAAGAGGAGACACTGCAT...ATTTGATCTACTTTGTCTCTTCAAGATTGGTAGCTTTTCTTTGGGGTCATTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp AACCTATGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACACTTCCGCAAACATCATaGAGAAATACTCGCTACTGG +
Preference number: 5 (lower is better)
Translates to: NLCMSVCSKQDHTLWLWTLPQTS*RNTRYW
Trigger: CCAGTAGCGAGTATTTCTCAATGATGTTTGCGGAAG...TGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCATAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp TGCATGAGTGTTTGTTCTAAACAAGACCATACTCTATGGCTGTGGACATTCAACGGCGTCTCTGGTGGATaGCTAAGAAGTGACTATATT +
Preference number: 5 (lower is better)
Translates to: CMSVCSKQDHTLWLWTFNGVSGG*LRSDYI
Trigger: AATATAGTCACTTCTTAGCAATCCACCAGAGACGCC...GTTGAATGTCCACAGCCATAGAGTATGGTCTTGTTTAGAACAAACACTCATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp AAGACCATACTCTATGGCTGTGGACATTCAACACTTATAGAAACATATAAAACCGGAGAGCTGGTATGGTaGCAGCTGAAGAATGTTCCT +
Preference number: 5 (lower is better)
Translates to: KTILYGCGHSTLIETYKTGELVW*QLKNVP
Trigger: AGGAACATTCTTCAGCTGCAACCATACCAGCTCTCC...GGTTTTATATGTTTCTATAAGTGTTGAATGTCCACAGCCATAGAGTATGGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp AAGACCATACTCTATGGCTGTGGACATTCAACACTTATAGAAACATATAAAACCTGCTCCAGCGTTTCCTaGGAAAGTGTGATGACATGC +
Preference number: 5 (lower is better)
Translates to: KTILYGCGHSTLIETYKTCSSVS*ESVMTC
Trigger: GCATGTCATCACACTTTCCAAGGAAACGCTGGAGCA...GGTTTTATATGTTTCTATAAGTGTTGAATGTCCACAGCCATAGAGTATGGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp ACCAATGACCCCAAAGAAAAGCTACCAATCTTGAAGAGACAAAGTAGATCAAATGTCTGCTCACTCAGCTaGACACTGTCTTCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: TNDPKEKLPILKRQSRSNVCSLS*TLSSSL
Trigger: TAAAGAAGAAGACAGTGTCAAGCTGAGTGAGCAGAC...ATTTGATCTACTTTGTCTCTTCAAGATTGGTAGCTTTTCTTTGGGGTCATTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS-3UTR CAA 90 bp ACCCAGAAGATATTTACAAGATGGCTAAACTATAAAGATGTCCACAGAACAGAGGTCTGCTCACTCAGCTaGACACTGTCTTCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: TQKIFTRWLNYKDVHRTEVCSLS*TLSSSL
Trigger: TAAAGAAGAAGACAGTGTCAAGCTGAGTGAGCAGAC...CTCTGTTCTGTGGACATCTTTATAGTTTAGCCATCTTGTAAATATCTTCTGGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS-3UTR CAA 90 bp AAGACCATACTCTATGGCTGTGGACATTCAACACTTATAGAAACATATAAAACCGGCGTCTCTGGTGGATaGCTAAGAAGTGACTATATT +
Preference number: 5 (lower is better)
Translates to: KTILYGCGHSTLIETYKTGVSGG*LRSDYI
Trigger: AATATAGTCACTTCTTAGCAATCCACCAGAGACGCC...GGTTTTATATGTTTCTATAAGTGTTGAATGTCCACAGCCATAGAGTATGGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CCA 72 bp TGGAACGGCCAGAGGCGCTTGGGTCAGCTCTGCTCCTaGCCTAGTGGAGGGGACAGGGGTGGCTCGGGCTCC +
Preference number: 6 (lower is better)
Translates to: WNGQRRLGQLCS*PSGGDRGGSGS
Trigger: GGAGCCCGAGCCACCCCTGTCCCCTCCACTAGGCCAGGAGCAGAGCTGACCCAAGCGCCTCTGGCCGTTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CCA 72 bp CCAGGGGAAGGGTCTAGTGGAACGGCCAGAGGCGCTTaGGTCAGCTCTGCTCCTGGCCTAGTGGAGGGGACA +
Preference number: 6 (lower is better)
Translates to: PGEGSSGTARGA*VSSAPGLVEGT
Trigger: TGTCCCCTCCACTAGGCCAGGAGCAGAGCTGACCCAAGCGCCTCTGGCCGTTCCACTAGACCCTTCCCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CAA 72 bp CCTGAGTGCAGGCTCATGTGCTCCAGCAGGGAGTGCTaGGTGGTCAGCGCCTTGCCGCACACGGTGCAGGTG +
Preference number: 6 (lower is better)
Translates to: PECRLMCSSREC*VVSALPHTVQV
Trigger: CACCTGCACCGTGTGCGGCAAGGCGCTGACCACCAAGCACTCCCTGCTGGAGCACATGAGCCTGCACTCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS GCA 72 bp TGTCCTGAGTGCAGGCTCATGTGCTCCAGCAGGGAGTaGTTGGTGGTCAGCGCCTTGCCGCACACGGTGCAG +
Preference number: 6 (lower is better)
Translates to: CPECRLMCSSRE*LVVSALPHTVQ
Trigger: CTGCACCGTGTGCGGCAAGGCGCTGACCACCAAGCACTCCCTGCTGGAGCACATGAGCCTGCACTCAGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CCA 72 bp CTGAGTGCAGGCTCATGTGCTCCAGCAGGGAGTGCTTaGTGGTCAGCGCCTTGCCGCACACGGTGCAGGTGT +
Preference number: 6 (lower is better)
Translates to: LSAGSCAPAGSA*WSAPCRTRCRC
Trigger: ACACCTGCACCGTGTGCGGCAAGGCGCTGACCACCAAGCACTCCCTGCTGGAGCACATGAGCCTGCACTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CAA 90 bp CAGGGGTGGCTCGGGCTCCTGTGTCAGCTGCAGGTACTGAGCTGGTaGTTTGCTCCTGGTGGGCGTGGAGATGCTCCAGCGTTTCCTTGG +
Preference number: 6 (lower is better)
Translates to: QGWLGLLCQLQVLSW*FAPGGRGDAPAFPW
Trigger: CCAAGGAAACGCTGGAGCATCTCCACGCCCACCAGGAGCAAACAACCAGCTCAGTACCTGCAGCTGACACAGGAGCCCGAGCCACCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS TCA 72 bp AGGGGTGGCTCGGGCTCCTGTGTCAGCTGCAGGTACTaGGCTGGTTGTTTGCTCCTGGTGGGCGTGGAGATG +
Preference number: 6 (lower is better)
Translates to: RGGSGSCVSCRY*AGCLLLVGVEM
Trigger: CATCTCCACGCCCACCAGGAGCAAACAACCAGCTCAGTACCTGCAGCTGACACAGGAGCCCGAGCCACCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CAA 72 bp CTCGGGCTCCTGTGTCAGCTGCAGGTACTGAGCTGGTaGTTTGCTCCTGGTGGGCGTGGAGATGCTCCAGCG +
Preference number: 6 (lower is better)
Translates to: LGLLCQLQVLSW*FAPGGRGDAPA
Trigger: CGCTGGAGCATCTCCACGCCCACCAGGAGCAAACAACCAGCTCAGTACCTGCAGCTGACACAGGAGCCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CCA 72 bp TGGCTCGGGCTCCTGTGTCAGCTGCAGGTACTGAGCTaGTTGTTTGCTCCTGGTGGGCGTGGAGATGCTCCA +
Preference number: 6 (lower is better)
Translates to: WLGLLCQLQVLS*LFAPGGRGDAP
Trigger: TGGAGCATCTCCACGCCCACCAGGAGCAAACAACCAGCTCAGTACCTGCAGCTGACACAGGAGCCCGAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS GCA 72 bp GCTCCTGTGTCAGCTGCAGGTACTGAGCTGGTTGTTTaGTCCTGGTGGGCGTGGAGATGCTCCAGCGTTTCC +
Preference number: 6 (lower is better)
Translates to: APVSAAGTELVV*SWWAWRCSSVS
Trigger: GGAAACGCTGGAGCATCTCCACGCCCACCAGGAGCAAACAACCAGCTCAGTACCTGCAGCTGACACAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CCA 72 bp CTCTGGGGGCTCTCGGCAGCCACGATGCTGACCCCCTaGCTGGGACCTGGCATGAAGTTAATGTTATGCACA +
Preference number: 6 (lower is better)
Translates to: LWGLSAATMLTP*LGPGMKLMLCT
Trigger: TGTGCATAACATTAACTTCATGCCAGGTCCCAGCCAGGGGGTCAGCATCGTGGCTGCCGAGAGCCCCCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CCA 72 bp CTCGGCAGCCACGATGCTGACCCCCTGGCTGGGACCTaGCATGAAGTTAATGTTATGCACAGAGTCGGTGAC +
Preference number: 6 (lower is better)
Translates to: LGSHDADPLAGT*HEVNVMHRVGD
Trigger: GTCACCGACTCTGTGCATAACATTAACTTCATGCCAGGTCCCAGCCAGGGGGTCAGCATCGTGGCTGCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CAA 90 bp CTGGTTGTTTGCTCCTGGTGGGCGTGGAGATGCTCCAGCGTTTCCTaGGAAAGTGTGATGACATGCACTGGCTCAGTCTGGGAGGACTCC +
Preference number: 6 (lower is better)
Translates to: LVVCSWWAWRCSSVS*ESVMTCTGSVWEDS
Trigger: GGAGTCCTCCCAGACTGAGCCAGTGCATGTCATCACACTTTCCAAGGAAACGCTGGAGCATCTCCACGCCCACCAGGAGCAAACAACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS TCA 72 bp CACCTCCTCCACGCTTCCTGGCTCACCAGCAGGCTCTaGTTCCTTGTCTTCTGGAGTCTGCTCACTCAGCTT +
Preference number: 6 (lower is better)
Translates to: HLLHASWLTSRL*FLVFWSLLTQL
Trigger: AAGCTGAGTGAGCAGACTCCAGAAGACAAGGAATCAGAGCCTGCTGGTGAGCCAGGAAGCGTGGAGGAGGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
ENSMUST00000216656.2
CDS GCA 72 bp CAGGTAAAAGACTTCTGTCCTGAGTGCAGGCTCATGTaGTCCAGCAGGGAGTGCTTGGTGGTCAGCGCCTTG +
Preference number: 6 (lower is better)
Translates to: QVKDFCPECRLM*SSRECLVVSAL
Trigger: CAAGGCGCTGACCACCAAGCACTCCCTGCTGGAGCACATGAGCCTGCACTCAGGACAGAAGTCTTTTACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CCA 72 bp TGCACCTACTCTGGCTCTCCTGTCCATCCCCAGCCTTaGGGTCAAAGTTCTCGTCCTTTTCAGCAGGCACCT +
Preference number: 6 (lower is better)
Translates to: CTYSGSPVHPQP*GQSSRPFQQAP
Trigger: AGGTGCCTGCTGAAAAGGACGAGAACTTTGACCCCAAGGCTGGGGATGGACAGGAGAGCCAGAGTAGGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
ENSMUST00000216656.2
CDS CCA 72 bp GTGTCAGCTGCAGGTACTGAGCTGGTTGTTTGCTCCTaGTGGGCGTGGAGATGCTCCAGCGTTTCCTTGGAA +
Preference number: 6 (lower is better)
Translates to: VSAAGTELVVCS*WAWRCSSVSLE
Trigger: TTCCAAGGAAACGCTGGAGCATCTCCACGCCCACCAGGAGCAAACAACCAGCTCAGTACCTGCAGCTGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CAA 90 bp GGCACCTCCTCCACGCTTCCTGGCTCACCAGCAGGCTCTGATTCCTaGTCTTCTGGAGTCTGCTCACTCAGCTTGACACTGTCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: GTSSTLPGSPAGSDS*SSGVCSLSLTLSSS
Trigger: AGAAGAAGACAGTGTCAAGCTGAGTGAGCAGACTCCAGAAGACAAGGAATCAGAGCCTGCTGGTGAGCCAGGAAGCGTGGAGGAGGTGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
ENSMUST00000216656.2
CDS TCA 72 bp TGCTCTCCCGACGTGGAGAGCTGGTATGGTTGCAGCTaGAGAATGTTCCTGCCCTCGTCCACATTACTGCCA +
Preference number: 6 (lower is better)
Translates to: CSPDVESWYGCS*RMFLPSSTLLP
Trigger: TGGCAGTAATGTGGACGAGGGCAGGAACATTCTTCAGCTGCAACCATACCAGCTCTCCACGTCGGGAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CCA 72 bp TCAGCTGCAGGTACTGAGCTGGTTGTTTGCTCCTGGTaGGCGTGGAGATGCTCCAGCGTTTCCTTGGAAAGT +
Preference number: 6 (lower is better)
Translates to: SAAGTELVVCSW*AWRCSSVSLES
Trigger: ACTTTCCAAGGAAACGCTGGAGCATCTCCACGCCCACCAGGAGCAAACAACCAGCTCAGTACCTGCAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS GCA 72 bp TGTTCCTGCCCTCGTCCACATTACTGCCAGAAACACTaGTGGAGTCTGCCGTGTGCTTCTCTTTGCTGTGGA +
Preference number: 6 (lower is better)
Translates to: CSCPRPHYCQKH*WSLPCASLCCG
Trigger: TCCACAGCAAAGAGAAGCACACGGCAGACTCCAGCAGTGTTTCTGGCAGTAATGTGGACGAGGGCAGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS GCA 72 bp AGATGCTCCAGCGTTTCCTTGGAAAGTGTGATGACATaGACTGGCTCAGTCTGGGAGGACTCCATCTGGCCT +
Preference number: 6 (lower is better)
Translates to: RCSSVSLESVMT*TGSVWEDSIWP
Trigger: AGGCCAGATGGAGTCCTCCCAGACTGAGCCAGTGCATGTCATCACACTTTCCAAGGAAACGCTGGAGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS GCA 72 bp ACTGAGCTGGTTGTTTGCTCCTGGTGGGCGTGGAGATaGTCCAGCGTTTCCTTGGAAAGTGTGATGACATGC +
Preference number: 6 (lower is better)
Translates to: TELVVCSWWAWR*SSVSLESVMTC
Trigger: GCATGTCATCACACTTTCCAAGGAAACGCTGGAGCATCTCCACGCCCACCAGGAGCAAACAACCAGCTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CCA 72 bp CCAGTGCAGTTCAAAGCTGGTGGCTTTGGGGCGCTATaGTTATCCTGGAAGTCTGCGTATGCCTTTACCAGG +
Preference number: 6 (lower is better)
Translates to: PVQFKAGGFGAL*LSWKSAYAFTR
Trigger: CCTGGTAAAGGCATACGCAGACTTCCAGGATAACCATAGCGCCCCAAAGCCACCAGCTTTGAACTGCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
ENSMUST00000216656.2
CDS CCA 72 bp AATAACCACCACTGGCGTCCCAGTGCAGTTCAAAGCTaGTGGCTTTGGGGCGCTATGGTTATCCTGGAAGTC +
Preference number: 6 (lower is better)
Translates to: NNHHWRPSAVQS*WLWGAMVILEV
Trigger: GACTTCCAGGATAACCATAGCGCCCCAAAGCCACCAGCTTTGAACTGCACTGGGACGCCAGTGGTGGTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
ENSMUST00000216656.2
CDS CCA 72 bp TCCTTGGAAAGTGTGATGACATGCACTGGCTCAGTCTaGGAGGACTCCATCTGGCCTCCAATCACACTGAGG +
Preference number: 6 (lower is better)
Translates to: SLESVMTCTGSV*EDSIWPPITLR
Trigger: CCTCAGTGTGATTGGAGGCCAGATGGAGTCCTCCCAGACTGAGCCAGTGCATGTCATCACACTTTCCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CCA 72 bp CACAATTCCAAACTCCCCAACCAATCGCACCACGTCTaGAAATCGAAGTTACCCGTGTGGCGTCTCTGGTGG +
Preference number: 6 (lower is better)
Translates to: HNSKLPNQSHHV*KSKLPVWRLWW
Trigger: CCACCAGAGACGCCACACGGGTAACTTCGATTTCCAGACGTGGTGCGATTGGTTGGGGAGTTTGGAATTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216656.2
CDS CAA 90 bp TGCAGGATGCAGTGTCTCCTCTTGGCACTGGAGTCAGAGAAGCATTaGCCACAGATGCTGCAGGAGTATGGCTTTTCTCCTCGGTGGATC +
Preference number: 6 (lower is better)
Translates to: CRMQCLLLALESEKH*PQMLQEYGFSPRWI
Trigger: GATCCACCGAGGAGAAAAGCCATACTCCTGCAGCATCTGTGGCAAATGCTTCTCTGACTCCAGTGCCAAGAGGAGACACTGCATCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080771.10
CDS CAA 90 bp AAGAAGCTGAATCTCCTGCTCTCCCGACGTGGAGAGCTGGTATGGTaGCAGCTGAAGAATGTTCCTGCCCTCGTCCACATTACTGCCAGA +
Preference number: 6 (lower is better)
Translates to: KKLNLLLSRRGELVW*QLKNVPALVHITAR
Trigger: TCTGGCAGTAATGTGGACGAGGGCAGGAACATTCTTCAGCTGCAACCATACCAGCTCTCCACGTCGGGAGAGCAGGAGATTCAGCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS GCA 72 bp TGGAGAGCTGGTATGGTTGCAGCTGAAGAATGTTCCTaGCCTCGTCCACATTACTGCCAGAAACACTGCTGG +
Preference number: 6 (lower is better)
Translates to: WRAGMVAAEECS*PRPHYCQKHCW
Trigger: CCAGCAGTGTTTCTGGCAGTAATGTGGACGAGGGCAGGAACATTCTTCAGCTGCAACCATACCAGCTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS GCA 72 bp GGAGTATGGCTTTTCTCCTCTGTGTGTGTCCGCAGGTaGTTCTTCAGCTGGGACACGTCCATAAACTTTCGG +
Preference number: 6 (lower is better)
Translates to: GVWLFSSVCVRR*FFSWDTSINFR
Trigger: CCGAAAGTTTATGGACGTGTCCCAGCTGAAGAAGCACCTGCGGACACACACAGAGGAGAAAAGCCATACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213797.2
CDS CCA 72 bp TTCAGCTGGGACACGTCCATAAACTTTCGGTGGCAGTaGCTGCATTCTGGTAGTGAGTGGCCTGTATGGACA +
Preference number: 6 (lower is better)
Translates to: FSWDTSINFRWQ*LHSGSEWPVWT
Trigger: TGTCCATACAGGCCACTCACTACCAGAATGCAGCCACTGCCACCGAAAGTTTATGGACGTGTCCCAGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000080771.10
CDS CAA 90 bp TGCAGGATGCAGTGTCTCCTCTTGGCACTGGAGTCAGAGAAGCATTaGCCACAGATGCTGCAGGAGTATGGCTTTTCTCCTCTGTGTGTG +
Preference number: 6 (lower is better)
Translates to: CRMQCLLLALESEKH*PQMLQEYGFSPLCV
Trigger: CACACACAGAGGAGAAAAGCCATACTCCTGCAGCATCTGTGGCAAATGCTTCTCTGACTCCAGTGCCAAGAGGAGACACTGCATCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213797.2
CDS CCA 72 bp CCTCTTCCGCAAACATCATTGAGAAATACTCGCTACTaGCGGCCAGCAAGGCTTTATGGGCTCGGAAATGCA +
Preference number: 6 (lower is better)
Translates to: PLPQTSLRNTRY*RPARLYGLGNA
Trigger: TGCATTTCCGAGCCCATAAAGCCTTGCTGGCCGCCAGTAGCGAGTATTTCTCAATGATGTTTGCGGAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
ENSMUST00000216656.2
CDS CCA 72 bp TGCTTCTTCAGCTGGGACACGTCCATAAACTTTCGGTaGCAGTGGCTGCATTCTGGTAGTGAGTGGCCTTAT +
Preference number: 6 (lower is better)
Translates to: CFFSWDTSINFR*QWLHSGSEWPY
Trigger: ATAAGGCCACTCACTACCAGAATGCAGCCACTGCCACCGAAAGTTTATGGACGTGTCCCAGCTGAAGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213797.2
CDS CAA 72 bp CAGTGTCTCCTCTTGGCACTGGAGTCAGAGAAGCATTaGCCACAGATGCTGCAGGAGTATGGCTTTTCTCCT +
Preference number: 6 (lower is better)
Translates to: QCLLLALESEKH*PQMLQEYGFSP
Trigger: AGGAGAAAAGCCATACTCCTGCAGCATCTGTGGCAAATGCTTCTCTGACTCCAGTGCCAAGAGGAGACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS TCA 72 bp TATGGCTTTTCTCCTCGGTGGATCCTGATGTGGGTCTaGAGGGAGCTCTTTGCTGTGAAAGATTTCCCACAG +
Preference number: 6 (lower is better)
Translates to: YGFSPRWILMWV*RELFAVKDFPQ
Trigger: CTGTGGGAAATCTTTCACAGCAAAGAGCTCCCTTCAGACCCACATCAGGATCCACCGAGGAGAAAAGCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000080771.10
CDS GCA 72 bp CTCGTCCACATTACTGCCAGAAACACTGCTGGAGTCTaGCGTGTGCTTCTCTTTGCTGTGGATTTTCAAGTG +
Preference number: 6 (lower is better)
Translates to: LVHITARNTAGV*RVLLFAVDFQV
Trigger: CACTTGAAAATCCACAGCAAAGAGAAGCACACGGCAGACTCCAGCAGTGTTTCTGGCAGTAATGTGGACGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CCA 72 bp TTCAGCTGGGACACGTCCATAAACTTTCGGTGGCAGTaGCTGCATTCTGGTAGTGAGTGGCCTTATTGGTAT +
Preference number: 6 (lower is better)
Translates to: FSWDTSINFRWQ*LHSGSEWPYWY
Trigger: ATACCAATAAGGCCACTCACTACCAGAATGCAGCCACTGCCACCGAAAGTTTATGGACGTGTCCCAGCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213797.2
CDS CAA 72 bp CTTCCCCGTTTCCGTTTCAGAGGATCGTTCTTCTTATaGGAAATAACCACCACTGGCGTCCCAGTGCAGTTC +
Preference number: 6 (lower is better)
Translates to: LPRFRFRGSFFL*EITTTGVPVQF
Trigger: GAACTGCACTGGGACGCCAGTGGTGGTTATTTCCAATAAGAAGAACGATCCTCTGAAACGGAAACGGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
ENSMUST00000216656.2
CDS CAA 72 bp TCTGCAGCCAGTTCTGATCTCCCTTCCTGCAAACCATaGGCTTTTCTTGGTCTTCCCCGTTTCCGTTTCAGA +
Preference number: 6 (lower is better)
Translates to: SAASSDLPSCKP*AFLGLPRFRFR
Trigger: TCTGAAACGGAAACGGGGAAGACCAAGAAAAGCCAATGGTTTGCAGGAAGGGAGATCAGAACTGGCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
ENSMUST00000216656.2
CDS CAA 90 bp CTGCAGCCAGTTCTGATCTCCCTTCCTGCAAACCATTGGCTTTTCTaGGTCTTCCCCGTTTCCGTTTCAGAGGATCGTTCTTCTTATTGG +
Preference number: 6 (lower is better)
Translates to: LQPVLISLPANHWLF*VFPVSVSEDRSSYW
Trigger: CCAATAAGAAGAACGATCCTCTGAAACGGAAACGGGGAAGACCAAGAAAAGCCAATGGTTTGCAGGAAGGGAGATCAGAACTGGCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
ENSMUST00000216656.2
CDS CAA 90 bp ACATTACTGCCAGAAACACTGCTGGAGTCTGCCGTGTGCTTCTCTTaGCTGTGGATTTTCAAGTGTGCCTTCAAATTGTCTAGGCGAGCG +
Preference number: 6 (lower is better)
Translates to: TLLPETLLESAVCFS*LWIFKCAFKLSRRA
Trigger: CGCTCGCCTAGACAATTTGAAGGCACACTTGAAAATCCACAGCAAAGAGAAGCACACGGCAGACTCCAGCAGTGTTTCTGGCAGTAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS TCA 72 bp AAGTTAATGTTATGCACAGAGTCGGTGACAAGAAGCTaGATCTCCTGCTCTCCCGACGTGGAGAGCTGGTAT +
Preference number: 6 (lower is better)
Translates to: KLMLCTESVTRS*ISCSPDVESWY
Trigger: ATACCAGCTCTCCACGTCGGGAGAGCAGGAGATTCAGCTTCTTGTCACCGACTCTGTGCATAACATTAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
CDS CCA 72 bp GAGAAATACTCGCTACTGGCGGCCAGCAAGGCTTTATaGGCTCGGAAATGCACATTCTCCACGATTAAAGTA +
Preference number: 6 (lower is better)
Translates to: EKYSLLAASKAL*ARKCTFSTIKV
Trigger: TACTTTAATCGTGGAGAATGTGCATTTCCGAGCCCATAAAGCCTTGCTGGCCGCCAGTAGCGAGTATTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
ENSMUST00000216656.2
CDS CAA 72 bp GTTCTGATCTCCCTTCCTGCAAACCATTGGCTTTTCTaGGTCTTCCCCGTTTCCGTTTCAGAGGATCGTTCT +
Preference number: 6 (lower is better)
Translates to: VLISLPANHWLF*VFPVSVSEDRS
Trigger: AGAACGATCCTCTGAAACGGAAACGGGGAAGACCAAGAAAAGCCAATGGTTTGCAGGAAGGGAGATCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
ENSMUST00000216656.2
CDS CAA 90 bp TTTCTTGGTCTTCCCCGTTTCCGTTTCAGAGGATCGTTCTTCTTATaGGAAATAACCACCACTGGCGTCCCAGTGCAGTTCAAAGCTGGT +
Preference number: 6 (lower is better)
Translates to: FLGLPRFRFRGSFFL*EITTTGVPVQFKAG
Trigger: ACCAGCTTTGAACTGCACTGGGACGCCAGTGGTGGTTATTTCCAATAAGAAGAACGATCCTCTGAAACGGAAACGGGGAAGACCAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
ENSMUST00000216656.2
CDS GCA 72 bp TGTATAGATAAATTCCAGCAGGATGCCAAAGGTGTCTaGAACCATGCCTTCCAGCATGTAGATAGACTGGCC +
Preference number: 6 (lower is better)
Translates to: CIDKFQQDAKGV*NHAFQHVDRLA
Trigger: GGCCAGTCTATCTACATGCTGGAAGGCATGGTTGCAGACACCTTTGGCATCCTGCTGGAATTTATCTATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000080771.10
ENSMUST00000213797.2
ENSMUST00000216656.2