RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZBTB18 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000063659

Ensembl transcript IDs: ENSMUST00000077225.8, ENSMUST00000094276.5, ENSMUST00000192851.2, ENSMUST00000193440.2, ENSMUST00000193480.2, ENSMUST00000195002.2, ENSMUST00000195388.2, ENSMUST00000195549.6, ENSMUST00000195612.2

Found 347 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGGGCACATTGACATCGGCGGCAGGCTTGCTACGGATGCCATCCTaGTCTCGGAAGTGCGTGCTCAGGTGGATCTGCAGGATGTGGGGG +
Preference number: 1 (lower is better)
Translates to: VGTLTSAAGLLRMPS*SRKCVLRWICRMWG
Trigger: CCCCCACATCCTGCAGATCCACCTGAGCACGCACTTCCGAGAGCAGGATGGCATCCGTAGCAAGCCTGCCGCCGATGTCAATGTGCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR GCA 90 bp TTTGTAAGTGCAAGACAGGAAAACAAACAGTGTGCAAAACGCTTCTaGCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCT +
Preference number: 1 (lower is better)
Translates to: FVSARQENKQCAKRF*PALAIRTTHRAAAS
Trigger: AGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGGCAGAAGCGTTTTGCACACTGTTTGTTTTCCTGTCTTGCACTTACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR CCA 90 bp AACACTCGGCTGGGTACGTGTGTACACCTAAACTCTGAGCTGGCATaGGTTCTGTGCAATTACAAGTGTGGTATGAATGCACACTGCACA +
Preference number: 1 (lower is better)
Translates to: NTRLGTCVHLNSELA*VLCNYKCGMNAHCT
Trigger: TGTGCAGTGTGCATTCATACCACACTTGTAATTGCACAGAACCCATGCCAGCTCAGAGTTTAGGTGTACACACGTACCCAGCCGAGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR TCA 90 bp ATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGTaGCCCAGTGTACTGTCAGATTTCTCTCACTGGGGACCATCAGAA +
Preference number: 1 (lower is better)
Translates to: ISFFISSKPSQRQSQ*PSVLSDFSHWGPSE
Trigger: TTCTGATGGTCCCCAGTGAGAGAAATCTGACAGTACACTGGGTCACTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR GCA 90 bp ACTTGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTTaGTCTAGTTTCTTTTATCAGAATGCTAAATTAGTGAGATTCTCA +
Preference number: 1 (lower is better)
Translates to: TWPNPQKKDSSLLVT*SSFFYQNAKLVRFS
Trigger: TGAGAATCTCACTAATTTAGCATTCTGATAAAAGAAACTAGAGCAAGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR TCA 90 bp CTTCTGCCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCTAAGGTCCAGTCTCTaGCAGTGGGCAAGCTCAGCG +
Preference number: 2 (lower is better)
Translates to: LLPRAGHQNHTSGCSLCCLRSSL*QWASSA
Trigger: CGCTGAGCTTGCCCACTGTCAGAGACTGGACCTTAG...GCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGGCAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR GCA 90 bp CTTCTGCCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCAACCACACATCGGGCTaGAGCCTCTGCTGCCGATAC +
Preference number: 2 (lower is better)
Translates to: LLPRAGHQNHTSGCSLCCNHTSG*SLCCRY
Trigger: GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTT...GCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGGCAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR CCA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACCTCAGAGGAGCCAGGTaGGCTGGCTCATACTGTACC +
Preference number: 2 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYLRGAR*AGSYCT
Trigger: GGTACAGTATGAGCCAGCCCACCTGGCTCCTCTGAG...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR CCA 90 bp CTTCTGCCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCAAGTGCGTGCTCAGGTaGATCTGCAGGATGTGGGGG +
Preference number: 2 (lower is better)
Translates to: LLPRAGHQNHTSGCSLCCKCVLR*ICRMWG
Trigger: CCCCCACATCCTGCAGATCCACCTGAGCACGCACTT...GCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGGCAGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR CAA 90 bp TTCCCACACAGGGAGCACGTGGGCACATTGACATCGGCGGCAGGCTaGCTACGGATGCCATCCTGCTCTCGGAAGTGCGTGCTCAGGTGG +
Preference number: 2 (lower is better)
Translates to: FPHREHVGTLTSAAG*LRMPSCSRKCVLRW
Trigger: CCACCTGAGCACGCACTTCCGAGAGCAGGATGGCATCCGTAGCAAGCCTGCCGCCGATGTCAATGTGCCCACGTGCTCCCTGTGTGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR GCA 90 bp GGCACATTGACATCGGCGGCAGGCTTGCTACGGATGCCATCCTGCTCTCGGAAGGTGCTCAGGTGGATCTaGAGGATGTGGGGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: GTLTSAAGLLRMPSCSRKVLRWI*RMWGLG
Trigger: CCCCAGCCCCCACATCCTGCAGATCCACCTGAGCAC...CTTCCGAGAGCAGGATGGCATCCGTAGCAAGCCTGCCGCCGATGTCAATGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR CCA 90 bp CTTCTGCCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCAGGAGCCAGGTGGGCTaGCTCATACTGTACCCTGTT +
Preference number: 2 (lower is better)
Translates to: LLPRAGHQNHTSGCSLCCRSQVG*LILYPV
Trigger: AACAGGGTACAGTATGAGCCAGCCCACCTGGCTCCT...GCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGGCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR CAA 90 bp TGGACCCGCTCGCTCTCTGGGGTCATCATCTCATCATCGCTGGCTTaGTCCTCCCGATCCAGTTCCCTTAAGACCGAGTCCTCCCTCAGA +
Preference number: 2 (lower is better)
Translates to: WTRSLSGVIISSSLA*SSRSSSLKTESSLR
Trigger: TCTGAGGGAGGACTCGGTCTTAAGGGAACTGGATCGGGAGGACAAAGCCAGCGATGATGAGATGATGACCCCAGAGAGCGAGCGGGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR TCA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACACAGTTCAACACTGCTaGAGCTGCAATATCCTTTTT +
Preference number: 2 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYTVQHC*SCNILF
Trigger: AAAAAGGATATTGCAGCTTCAGCAGTGTTGAACTGT...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR GCA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACAATGCACACTGCACATaGAATTCTTTAAGCCGTTTG +
Preference number: 2 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYNAHCT*NSLSRL
Trigger: CAAACGGCTTAAAGAATTGCATGTGCAGTGTGCATT...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR GCA 90 bp CTTCTGCCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCGGTATGAATGCACACTaGACATGCAATTCTTTAAGC +
Preference number: 2 (lower is better)
Translates to: LLPRAGHQNHTSGCSLCCGMNAH*TCNSLS
Trigger: GCTTAAAGAATTGCATGTGCAGTGTGCATTCATACC...GCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGGCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR GCA 90 bp AACACTCGGCTGGGTACGTGTGTACACCTAAACTCTGAGCTGGCATGGGTTCTGCTACGGATGCCATCCTaGTCTCGGAAGTGCGTGCTC +
Preference number: 2 (lower is better)
Translates to: NTRLGTCVHLNSELAWVLLRMPS*SRKCVL
Trigger: GAGCACGCACTTCCGAGAGCAGGATGGCATCCGTAG...CAGAACCCATGCCAGCTCAGAGTTTAGGTGTACACACGTACCCAGCCGAGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR GCA 90 bp TTGACCGACAAGGAGTTCACCAACTCACAGTGGAACTTGCGGATGTGTCTGTACTGCGCTCGCACCACTTaGAGGCATGGGGCTTCTCGC +
Preference number: 2 (lower is better)
Translates to: LTDKEFTNSQWNLRMCLYCARTT*RHGASR
Trigger: GCGAGAAGCCCCATGCCTGCAAGTGGTGCGAGCGCA...GTACAGACACATCCGCAAGTTCCACTGTGAGTTGGTGAACTCCTTGTCGGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR TCA 90 bp AAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTACAAAAGAGCACGTGGGCACATTaGCATCGGCGGCAGGCTTGC +
Preference number: 2 (lower is better)
Translates to: KTVWSTGKALKTMQCVQKSTWAH*HRRQAC
Trigger: GCAAGCCTGCCGCCGATGTCAATGTGCCCACGTGCT...CTTTTGTACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR GCA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACTCTCTACTTGTGACTTaGTCTAGTTTCTTTTATCAG +
Preference number: 2 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYSLLVT*SSFFYQ
Trigger: CTGATAAAAGAAACTAGAGCAAGTCACAAGTAGAGA...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR CAA 90 bp TCTAAGGTCCAGTCTCTGACAGTGGGCAAGCTCAGCGCTTCACTTTaGACCGACAAGGAGTTCACCAACTCACAGTGGAACTTGCGGATG +
Preference number: 2 (lower is better)
Translates to: SKVQSLTVGKLSASL*TDKEFTNSQWNLRM
Trigger: CATCCGCAAGTTCCACTGTGAGTTGGTGAACTCCTTGTCGGTCAAAAGTGAAGCGCTGAGCTTGCCCACTGTCAGAGACTGGACCTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR GCA 90 bp AACCTTCACAGAGACAGTCCCAGTGACCCAGTGTACTGTCAGATTTCTCTCACTGCTCTCGGAAGTGCGTaGTCAGGTGGATCTGCAGGA +
Preference number: 2 (lower is better)
Translates to: NLHRDSPSDPVYCQISLTALGSA*SGGSAG
Trigger: TCCTGCAGATCCACCTGAGCACGCACTTCCGAGAGC...AGTGAGAGAAATCTGACAGTACACTGGGTCACTGGGACTGTCTCTGTGAAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR CCA 90 bp TTGACCGACAAGGAGTTCACCAACTCACAGTGGAACTTGCGGATGTGTCTGTACGCAGGATGTGGGGGCTaGGGAAGACTTTGTTGCACA +
Preference number: 2 (lower is better)
Translates to: LTDKEFTNSQWNLRMCLYAGCGG*GRLCCT
Trigger: TGTGCAACAAAGTCTTCCCCAGCCCCCACATCCTGC...GTACAGACACATCCGCAAGTTCCACTGTGAGTTGGTGAACTCCTTGTCGGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR TCA 90 bp AAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTACAAAAGTCCTCTCGTGGCGCTTaGGGGTGTACATGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: KTVWSTGKALKTMQCVQKSSRGA*GCTCRR
Trigger: TCTCCTGCATGTACACCCTCAAGCGCCACGAGAGGA...CTTTTGTACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR CCA 90 bp GTGCAAAAACAAGTTAAGATCCCAACTTTTCAGTTCCAGGAAACAAGACTGCTTATGCCCCCTTCCACCTaGACCCGCTCGCTCTCTGGG +
Preference number: 2 (lower is better)
Translates to: VQKQVKIPTFQFQETRLLMPPST*TRSLSG
Trigger: CCCAGAGAGCGAGCGGGTCCAGGTGGAAGGGGGCAT...AAGCAGTCTTGTTTCCTGGAACTGAAAAGTTGGGATCTTAACTTGTTTTTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR CCA 90 bp CTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGTGACGGGCACATGAAGATCTaGCCTGCGGGGCTCAGGATA +
Preference number: 2 (lower is better)
Translates to: LQYPFSSQANLHRDSPSDGHMKI*PAGLRI
Trigger: TATCCTGAGCCCCGCAGGCCAGATCTTCATGTGCCC...GTCACTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR GCA 90 bp AACACTCGGCTGGGTACGTGTGTACACCTAAACTCTGAGCTGGCATGGGTTCTGAAGCGCTCAAGACAATaGAGTGTGTACAAAAGTAAG +
Preference number: 2 (lower is better)
Translates to: NTRLGTCVHLNSELAWVLKRSRQ*SVYKSK
Trigger: CTTACTTTTGTACACACTGCATTGTCTTGAGCGCTT...CAGAACCCATGCCAGCTCAGAGTTTAGGTGTACACACGTACCCAGCCGAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR GCA 90 bp AACACTCGGCTGGGTACGTGTGTACACCTAAACTCTGAGCTGGCATGGGTTCTGAATGCACACTGCACATaGAATTCTTTAAGCCGTTTG +
Preference number: 2 (lower is better)
Translates to: NTRLGTCVHLNSELAWVLNAHCT*NSLSRL
Trigger: CAAACGGCTTAAAGAATTGCATGTGCAGTGTGCATT...CAGAACCCATGCCAGCTCAGAGTTTAGGTGTACACACGTACCCAGCCGAGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR TCA 90 bp GAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGTCAGCGCTTCACTTTTaGCCGACAAGGAGTTCACCA +
Preference number: 2 (lower is better)
Translates to: EAAISFFISSKPSQRQSQSALHF*PTRSSP
Trigger: TGGTGAACTCCTTGTCGGTCAAAAGTGAAGCGCTGA...CTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR GCA 90 bp AACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGGCCTAACCCTCAAAAGAAAGCAGACTGTTCTCCATaGCCCCTTCCACCTGGACCC +
Preference number: 2 (lower is better)
Translates to: NHLLRRFYWLTWPNPQKKADCSP*PLPPGP
Trigger: GGGTCCAGGTGGAAGGGGGCATGGAGAACAGTCTGC...TTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATAAAACCTTCTCAACAAATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR GCA 90 bp GTTCTGTGCAATTACAAGTGTGGTATGAATGCACACTGCACATGCAATTCTTTATCCTGCTCTCGGAAGTaGGTGCTCAGGTGGATCTGC +
Preference number: 2 (lower is better)
Translates to: VLCNYKCGMNAHCTCNSLSCSRK*VLRWIC
Trigger: GCAGATCCACCTGAGCACGCACTTCCGAGAGCAGGA...TAAAGAATTGCATGTGCAGTGTGCATTCATACCACACTTGTAATTGCACAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR CCA 90 bp CAAAACAAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTACAAAACAAAACAGTGTaGAGCACAGGGAAAGCGCTC +
Preference number: 2 (lower is better)
Translates to: QNKTVWSTGKALKTMQCVQNKTV*STGKAL
Trigger: GAGCGCTTTCCCTGTGCTCCACACTGTTTTGTTTTG...TACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTTGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR TCA 90 bp GGAAAAACAACCACTGTTTCCCATGCTACTCCCATAGACCTTATTTGTAAGTGCTGTACACCTAAACTCTaGGCTGGCATGGGTTCTGTG +
Preference number: 2 (lower is better)
Translates to: GKTTTVSHATPIDLICKCCTPKL*AGMGSV
Trigger: CACAGAACCCATGCCAGCTCAGAGTTTAGGTGTACA...GCACTTACAAATAAGGTCTATGGGAGTAGCATGGGAAACAGTGGTTGTTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR GCA 90 bp TTGACCGACAAGGAGTTCACCAACTCACAGTGGAACTTGCGGATGTGTCTGTACCACTCTCTTTCACAGTaGTATGTTCCATGTCATAGT +
Preference number: 2 (lower is better)
Translates to: LTDKEFTNSQWNLRMCLYHSLSQ*YVPCHS
Trigger: ACTATGACATGGAACATAGCACTGTGAAAGAGAGTG...GTACAGACACATCCGCAAGTTCCACTGTGAGTTGGTGAACTCCTTGTCGGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR CCA 90 bp ACCTTCACAGAGACAGTCCCAGTGACCCAGTGTACTGTCAGATTTCTCTCACTGTTGAGAAGGTTTTATTaGCTAACTTGGCCTAACCCT +
Preference number: 2 (lower is better)
Translates to: TFTETVPVTQCTVRFLSLLRRFY*LTWPNP
Trigger: AGGGTTAGGCCAAGTTAGCCAATAAAACCTTCTCAA...CAGTGAGAGAAATCTGACAGTACACTGGGTCACTGGGACTGTCTCTGTGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR CCA 90 bp GTGCAAAAACAAGTTAAGATCCCAACTTTTCAGTTCCAGGAAACAAGACTGCTTCGGGGCTCAGGATATTaGAGACGTAGGGAAGCAGAC +
Preference number: 2 (lower is better)
Translates to: VQKQVKIPTFQFQETRLLRGSGY*RRREAD
Trigger: GTCTGCTTCCCTACGTCTCCAATATCCTGAGCCCCG...AAGCAGTCTTGTTTCCTGGAACTGAAAAGTTGGGATCTTAACTTGTTTTTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR TCA 90 bp GAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGGAGGGAGAGAGAGAATaGCCTATGACCTATTGTCAA +
Preference number: 2 (lower is better)
Translates to: EAAISFFISSKPSQRQSQEGERE*PMTYCQ
Trigger: TTGACAATAGGTCATAGGTCATTCTCTCTCTCCCTC...CTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR GCA 90 bp CTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGTGACCTGGCATGGGTTCTGTaGAATTACAAGTGTGGTATG +
Preference number: 2 (lower is better)
Translates to: LQYPFSSQANLHRDSPSDLAWVL*NYKCGM
Trigger: CATACCACACTTGTAATTGCACAGAACCCATGCCAG...GTCACTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR CCA 90 bp GAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGAACTCTGAGCTGGCATaGGTTCTGTGCAATTACAAG +
Preference number: 2 (lower is better)
Translates to: EAAISFFISSKPSQRQSQNSELA*VLCNYK
Trigger: CTTGTAATTGCACAGAACCCATGCCAGCTCAGAGTT...CTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR GCA 90 bp ACCTTCACAGAGACAGTCCCAGTGACCCAGTGTACTGTCAGATTTCTCTCACTGTCTCTACTTGTGACTTaGTCTAGTTTCTTTTATCAG +
Preference number: 2 (lower is better)
Translates to: TFTETVPVTQCTVRFLSLSLLVT*SSFFYQ
Trigger: CTGATAAAAGAAACTAGAGCAAGTCACAAGTAGAGA...CAGTGAGAGAAATCTGACAGTACACTGGGTCACTGGGACTGTCTCTGTGAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR GCA 90 bp CTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGTGACGGTATGAATGCACACTaGACATGCAATTCTTTAAGC +
Preference number: 2 (lower is better)
Translates to: LQYPFSSQANLHRDSPSDGMNAH*TCNSLS
Trigger: GCTTAAAGAATTGCATGTGCAGTGTGCATTCATACC...GTCACTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR GCA 90 bp GTTCTGTGCAATTACAAGTGTGGTATGAATGCACACTGCACATGCAATTCTTTAACTCACAGTGGAACTTaGGGATGTGTCTGTACAGGT +
Preference number: 2 (lower is better)
Translates to: VLCNYKCGMNAHCTCNSLTHSGT*GCVCTG
Trigger: ACCTGTACAGACACATCCGCAAGTTCCACTGTGAGT...TAAAGAATTGCATGTGCAGTGTGCATTCATACCACACTTGTAATTGCACAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR GCA 90 bp CAAAACAAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTATCTCTACTTGTGACTTaGTCTAGTTTCTTTTATCAG +
Preference number: 2 (lower is better)
Translates to: QNKTVWSTGKALKTMQCVSLLVT*SSFFYQ
Trigger: CTGATAAAAGAAACTAGAGCAAGTCACAAGTAGAGA...TACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTTGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR CCA 90 bp GGAAAAACAACCACTGTTTCCCATGCTACTCCCATAGACCTTATTTGTAAGTGCTTGAGAAGGTTTTATTaGCTAACTTGGCCTAACCCT +
Preference number: 2 (lower is better)
Translates to: GKTTTVSHATPIDLICKCLRRFY*LTWPNP
Trigger: AGGGTTAGGCCAAGTTAGCCAATAAAACCTTCTCAA...GCACTTACAAATAAGGTCTATGGGAGTAGCATGGGAAACAGTGGTTGTTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR TCA 90 bp GTTCTGTGCAATTACAAGTGTGGTATGAATGCACACTGCACATGCAATTCTTTAACAGTTCAACACTGCTaGAGCTGCAATATCCTTTTT +
Preference number: 2 (lower is better)
Translates to: VLCNYKCGMNAHCTCNSLTVQHC*SCNILF
Trigger: AAAAAGGATATTGCAGCTTCAGCAGTGTTGAACTGT...TAAAGAATTGCATGTGCAGTGTGCATTCATACCACACTTGTAATTGCACAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR GCA 90 bp AACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGGCCTAACCCTCAAAAGAAAAAGCGCTCAAGACAATaGAGTGTGTACAAAAGTAAG +
Preference number: 2 (lower is better)
Translates to: NHLLRRFYWLTWPNPQKKKRSRQ*SVYKSK
Trigger: CTTACTTTTGTACACACTGCATTGTCTTGAGCGCTT...TTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATAAAACCTTCTCAACAAATGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR CAA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACCTGCGCTCGCACCACTaGCAGGCATGGGGCTTCTCG +
Preference number: 3 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYLRSHH*QAWGFS
Trigger: CGAGAAGCCCCATGCCTGCAAGTGGTGCGAGCGCAG...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR CAA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACACATCGGCGGCAGGCTaGCTACGGATGCCATCCTGC +
Preference number: 3 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYTSAAG*LRMPSC
Trigger: GCAGGATGGCATCCGTAGCAAGCCTGCCGCCGATGT...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR GCA 72 bp GCAGGCTTGCTACGGATGCCATCCTGCTCTCGGAAGTaGGTGCTCAGGTGGATCTGCAGGATGTGGGGGCTG +
Preference number: 3 (lower is better)
Translates to: AGLLRMPSCSRK*VLRWICRMWGL
Trigger: CAGCCCCCACATCCTGCAGATCCACCTGAGCACGCACTTCCGAGAGCAGGATGGCATCCGTAGCAAGCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR CAA 90 bp CTTCTGCCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCTCAGCGCTTCACTTTaGACCGACAAGGAGTTCACC +
Preference number: 3 (lower is better)
Translates to: LLPRAGHQNHTSGCSLCCLSASL*TDKEFT
Trigger: GGTGAACTCCTTGTCGGTCAAAAGTGAAGCGCTGAG...GCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGGCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR GCA 72 bp GGATATTGGAGACGTAGGGAAGCAGACTGTTCTCCATaGCCCCTTCCACCTGGACCCGCTCGCTCTCTGGGG +
Preference number: 3 (lower is better)
Translates to: GYWRRREADCSP*PLPPGPARSLG
Trigger: CCCCAGAGAGCGAGCGGGTCCAGGTGGAAGGGGGCATGGAGAACAGTCTGCTTCCCTACGTCTCCAATATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR GCA 72 bp TTGACATCGGCGGCAGGCTTGCTACGGATGCCATCCTaGTCTCGGAAGTGCGTGCTCAGGTGGATCTGCAGG +
Preference number: 3 (lower is better)
Translates to: LTSAAGLLRMPS*SRKCVLRWICR
Trigger: CCTGCAGATCCACCTGAGCACGCACTTCCGAGAGCAGGATGGCATCCGTAGCAAGCCTGCCGCCGATGTCAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR CCA 72 bp CTCCATGCCCCCTTCCACCTGGACCCGCTCGCTCTCTaGGGTCATCATCTCATCATCGCTGGCTTTGTCCTC +
Preference number: 3 (lower is better)
Translates to: LHAPFHLDPLAL*GHHLIIAGFVL
Trigger: GAGGACAAAGCCAGCGATGATGAGATGATGACCCCAGAGAGCGAGCGGGTCCAGGTGGAAGGGGGCATGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR GCA 72 bp CCATCCTGCTCTCGGAAGTGCGTGCTCAGGTGGATCTaGAGGATGTGGGGGCTGGGGAAGACTTTGTTGCAC +
Preference number: 3 (lower is better)
Translates to: PSCSRKCVLRWI*RMWGLGKTLLH
Trigger: GTGCAACAAAGTCTTCCCCAGCCCCCACATCCTGCAGATCCACCTGAGCACGCACTTCCGAGAGCAGGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR CAA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACTCATACTGTACCCTGTaGTTAGTGCTCACACTCTCT +
Preference number: 3 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYSYCTL*LVLTLS
Trigger: AGAGAGTGTGAGCACTAACAACAGGGTACAGTATGA...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR GCA 72 bp GACTTTGTTGCACAGGGGGCACATGAAGATCTGGCCTaGGGGGCTCAGGATATTGGAGACGTAGGGAAGCAG +
Preference number: 3 (lower is better)
Translates to: DFVAQGAHEDLA*GAQDIGDVGKQ
Trigger: CTGCTTCCCTACGTCTCCAATATCCTGAGCCCCGCAGGCCAGATCTTCATGTGCCCCCTGTGCAACAAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR CAA 90 bp CTTCTGCCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCTCAGAAAACCAGAAGTaGCCACACAAAGTTTTAAGT +
Preference number: 3 (lower is better)
Translates to: LLPRAGHQNHTSGCSLCCSENQK*PHKVLS
Trigger: ACTTAAAACTTTGTGTGGCAACTTCTGGTTTTCTGA...GCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGGCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR CAA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACATGACCTATGACCTATaGTCAATTTGTGCAGTAGTT +
Preference number: 3 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYMTYDL*SICAVV
Trigger: AACTACTGCACAAATTGACAATAGGTCATAGGTCAT...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR CAA 90 bp AACCTTCACAGAGACAGTCCCAGTGACCCAGTGTACTGTCAGATTTCTCTCACTGGGCTGGGGAAGACTTaGTTGCACAGGGGGCACATG +
Preference number: 3 (lower is better)
Translates to: NLHRDSPSDPVYCQISLTGLGKT*LHRGHM
Trigger: CATGTGCCCCCTGTGCAACAAAGTCTTCCCCAGCCC...AGTGAGAGAAATCTGACAGTACACTGGGTCACTGGGACTGTCTCTGTGAAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR CAA 90 bp AAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTACAAAAGGTCCTCTCGTGGCGCTaGAGGGTGTACATGCAGGAG +
Preference number: 3 (lower is better)
Translates to: KTVWSTGKALKTMQCVQKVLSWR*RVYMQE
Trigger: CTCCTGCATGTACACCCTCAAGCGCCACGAGAGGAC...CTTTTGTACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR-3UTR CAA 90 bp ACTGCTGAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGGAGCACGTGGGCACATaGACATCGGCGGCAGGCTTG +
Preference number: 3 (lower is better)
Translates to: TAEAAISFFISSKPSQRQEHVGT*TSAAGL
Trigger: CAAGCCTGCCGCCGATGTCAATGTGCCCACGTGCTC...CTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTCAGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR CCA 72 bp TCACTTTTGACCGACAAGGAGTTCACCAACTCACAGTaGAACTTGCGGATGTGTCTGTACAGGTCTCCGGAC +
Preference number: 3 (lower is better)
Translates to: SLLTDKEFTNSQ*NLRMCLYRSPD
Trigger: GTCCGGAGACCTGTACAGACACATCCGCAAGTTCCACTGTGAGTTGGTGAACTCCTTGTCGGTCAAAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR TCA 72 bp AAACACTCGGCTGGGTACGTGTGTACACCTAAACTCTaGGCTGGCATGGGTTCTGTGCAATTACAAGTGTGG +
Preference number: 3 (lower is better)
Translates to: KHSAGYVCTPKL*AGMGSVQLQVW
Trigger: CCACACTTGTAATTGCACAGAACCCATGCCAGCTCAGAGTTTAGGTGTACACACGTACCCAGCCGAGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR TCA 72 bp TTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGTaGCCCAGTGTACTGTCAGATTTCTCTCACTGGGGA +
Preference number: 3 (lower is better)
Translates to: FISSKPSQRQSQ*PSVLSDFSHWG
Trigger: TCCCCAGTGAGAGAAATCTGACAGTACACTGGGTCACTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR CAA 90 bp ACTGCTGAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGCTGGGGAAGACTTTGTaGCACAGGGGGCACATGAAG +
Preference number: 3 (lower is better)
Translates to: TAEAAISFFISSKPSQRQLGKTL*HRGHMK
Trigger: CTTCATGTGCCCCCTGTGCAACAAAGTCTTCCCCAG...CTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTCAGCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR CCA 72 bp CTGGGTACGTGTGTACACCTAAACTCTGAGCTGGCATaGGTTCTGTGCAATTACAAGTGTGGTATGAATGCA +
Preference number: 3 (lower is better)
Translates to: LGTCVHLNSELA*VLCNYKCGMNA
Trigger: TGCATTCATACCACACTTGTAATTGCACAGAACCCATGCCAGCTCAGAGTTTAGGTGTACACACGTACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR GCA 72 bp AAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATaGAGTGTGTACAAAAGTAAGCCATGTGAAAGCGTT +
Preference number: 3 (lower is better)
Translates to: KQCGAQGKRSRQ*SVYKSKPCESV
Trigger: AACGCTTTCACATGGCTTACTTTTGTACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR CAA 90 bp AAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTACAAAAGTCAGAAAACCAGAAGTaGCCACACAAAGTTTTAAGT +
Preference number: 3 (lower is better)
Translates to: KTVWSTGKALKTMQCVQKSENQK*PHKVLS
Trigger: ACTTAAAACTTTGTGTGGCAACTTCTGGTTTTCTGA...CTTTTGTACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR CAA 90 bp AACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGGCCTAACCCTCAAAAGAAAAACTCACAGTGGAACTaGCGGATGTGTCTGTACAGG +
Preference number: 3 (lower is better)
Translates to: NHLLRRFYWLTWPNPQKKNSQWN*RMCLYR
Trigger: CCTGTACAGACACATCCGCAAGTTCCACTGTGAGTT...TTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATAAAACCTTCTCAACAAATGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
3UTR GCA 72 bp GTTTCCCATGCTACTCCCATAGACCTTATTTGTAAGTaGAAGACAGGAAAACAAACAGTGTGCAAAACGCTT +
Preference number: 3 (lower is better)
Translates to: VSHATPIDLICK*KTGKQTVCKTL
Trigger: AAGCGTTTTGCACACTGTTTGTTTTCCTGTCTTGCACTTACAAATAAGGTCTATGGGAGTAGCATGGGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR CAA 90 bp GAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGTCAGAAAACCAGAAGTaGCCACACAAAGTTTTAAGT +
Preference number: 3 (lower is better)
Translates to: EAAISFFISSKPSQRQSQSENQK*PHKVLS
Trigger: ACTTAAAACTTTGTGTGGCAACTTCTGGTTTTCTGA...CTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR CCA 72 bp CAGAACCATTTGTTGAGAAGGTTTTATTGGCTAACTTaGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTT +
Preference number: 3 (lower is better)
Translates to: QNHLLRRFYWLT*PNPQKKDSSLL
Trigger: AAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATAAAACCTTCTCAACAAATGGTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR-3UTR CAA 90 bp GTGCAAAAACAAGTTAAGATCCCAACTTTTCAGTTCCAGGAAACAAGACTGCTTTCAGAAAACCAGAAGTaGCCACACAAAGTTTTAAGT +
Preference number: 3 (lower is better)
Translates to: VQKQVKIPTFQFQETRLLSENQK*PHKVLS
Trigger: ACTTAAAACTTTGTGTGGCAACTTCTGGTTTTCTGA...AAGCAGTCTTGTTTCCTGGAACTGAAAAGTTGGGATCTTAACTTGTTTTTGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp CTTCTGCCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCAGCTGCTGTGGCGTGTaGCTCGGCCTCTCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: LLPRAGHQNHTSGCSLCCSCCGV*LGLSAS
Trigger: GCTGGCGGAGAGGCCGAGCCACACGCCACAGCAGCT...GCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGGCAGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp CTTCTGCCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCATGCCCCCTTCCACCTaGACCCGCTCGCTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LLPRAGHQNHTSGCSLCCMPPST*TRSLSG
Trigger: CCCAGAGAGCGAGCGGGTCCAGGTGGAAGGGGGCAT...GCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGGCAGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACACTGGGCAGGTCACCTaGCATGTGGCTGCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYTGQVT*HVAAAV
Trigger: GACGGCAGCAGCCACATGGCAGGTGACCTGCCCAGT...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACGTGCTCAGGTGGATCTaGAGGATGTGGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYVLRWI*RMWGLG
Trigger: CCCCAGCCCCCACATCCTGCAGATCCACCTGAGCAC...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACTGCGCTCGCACCACTTaGAGGCATGGGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYCARTT*RHGASR
Trigger: GCGAGAAGCCCCATGCCTGCAAGTGGTGCGAGCGCA...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp CTTCTGCCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCAGAACAGCTCGGTGTaGCCGGAACTGGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: LLPRAGHQNHTSGCSLCCQNSSV*PELGIS
Trigger: GGAGATGCCCAGTTCCGGGCACACCGAGCTGTTCTG...GCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGGCAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACTACAGGTCTCCGGACTaGGTGAACCTGCGCTCGCAC +
Preference number: 4 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYYRSPD*VNLRSH
Trigger: GTGCGAGCGCAGGTTCACGCAGTCCGGAGACCTGTA...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp GGCACATTGACATCGGCGGCAGGCTTGCTACGGATGCCATCCTGCTCTCGGAAGAGCTGCTGTGGCGTGTaGCTCGGCCTCTCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: GTLTSAAGLLRMPSCSRKSCCGV*LGLSAS
Trigger: GCTGGCGGAGAGGCCGAGCCACACGCCACAGCAGCT...CTTCCGAGAGCAGGATGGCATCCGTAGCAAGCCTGCCGCCGATGTCAATGTGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
CDS-3UTR TCA 90 bp CTTCTGCCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCGTGGCTGCTGCCGTCTaGGAGGCTCTCGACTTTATC +
Preference number: 4 (lower is better)
Translates to: LLPRAGHQNHTSGCSLCCVAAAV*EALDFI
Trigger: GATAAAGTCGAGAGCCTCTCAGACGGCAGCAGCCAC...GCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGGCAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp GGCACATTGACATCGGCGGCAGGCTTGCTACGGATGCCATCCTGCTCTCGGAAGCGCCAGCCTGGGGGATaGCTGCTGAGTCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GTLTSAAGLLRMPSCSRKRQPGG*LLSLRA
Trigger: TGCCCTCAGACTCAGCAGGCATCCCCCAGGCTGGCG...CTTCCGAGAGCAGGATGGCATCCGTAGCAAGCCTGCCGCCGATGTCAATGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
CDS-3UTR GCA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACGCTCTCGGAAGTGCGTaGTCAGGTGGATCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYALGSA*SGGSAG
Trigger: TCCTGCAGATCCACCTGAGCACGCACTTCCGAGAGC...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACTTTTTCCAGCTGCTGTaGCGTGTGGCTCGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYFFQLL*RVARPL
Trigger: GAGAGGCCGAGCCACACGCCACAGCAGCTGGAAAAA...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACTACTGTTTTTCCAGCTaGTGTGGCGTGTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYYCFSS*CGVWLG
Trigger: GCCGAGCCACACGCCACAGCAGCTGGAAAAACAGTA...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACGACCCGCTCGCTCTCTaGGGTCATCATCTCATCATC +
Preference number: 4 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYDPLAL*GHHLII
Trigger: GATGATGAGATGATGACCCCAGAGAGCGAGCGGGTC...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACCGGGGCTCAGGATATTaGAGACGTAGGGAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYRGSGY*RRREAD
Trigger: GTCTGCTTCCCTACGTCTCCAATATCCTGAGCCCCG...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp CTTCTGCCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCGCAGGATGTGGGGGCTaGGGAAGACTTTGTTGCACA +
Preference number: 4 (lower is better)
Translates to: LLPRAGHQNHTSGCSLCCAGCGG*GRLCCT
Trigger: TGTGCAACAAAGTCTTCCCCAGCCCCCACATCCTGC...GCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGGCAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
3UTR CAA 72 bp AGGGAGCACGTGGGCACATTGACATCGGCGGCAGGCTaGCTACGGATGCCATCCTGCTCTCGGAAGTGCGTG +
Preference number: 4 (lower is better)
Translates to: REHVGTLTSAAG*LRMPSCSRKCV
Trigger: CACGCACTTCCGAGAGCAGGATGGCATCCGTAGCAAGCCTGCCGCCGATGTCAATGTGCCCACGTGCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
CDS-3UTR GCA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACTTCTCCACCTTCACCTaGACCAGGTTGCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYFSTFT*TRLLLS
Trigger: GCTGAGAAGCAACCTGGTGCAGGTGAAGGTGGAGAA...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACTTGAGCTGCAGGGGCTaGCTACTGTTTTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYLSCRG*LLFFQL
Trigger: CAGCTGGAAAAACAGTAGCCAGCCCCTGCAGCTCAA...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACCTCCCACCAGAACAGTaGAGTCACAAAGAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYLPPEQ*SHKESP
Trigger: AGGGCTTTCTTTGTGACTGCACTGTTCTGGTGGGAG...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp CCTGGACCCGCTCGCTCTCTGGGGTCATCATCTCATCATCGCTGGCTTTGTCCTCTGCCATGTGGCTGCTaGCGTCTGAGAGGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: PGPARSLGSSSHHRWLCPLPCGC*RLRGSR
Trigger: TCGAGAGCCTCTCAGACGGCAGCAGCCACATGGCAG...AGGACAAAGCCAGCGATGATGAGATGATGACCCCAGAGAGCGAGCGGGTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
CDS-3UTR GCA 90 bp CTTCTGCCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCAAGACTCTGTTGAGCTaGAGGGGCTGGCTACTGTTT +
Preference number: 4 (lower is better)
Translates to: LLPRAGHQNHTSGCSLCCKTLLS*RGWLLF
Trigger: AAACAGTAGCCAGCCCCTGCAGCTCAACAGAGTCTT...GCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGGCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp CTTCTGCCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCTTCATCTTCATCACTaGGCAGGTCACCTGCCATGT +
Preference number: 4 (lower is better)
Translates to: LLPRAGHQNHTSGCSLCCLHLHH*AGHLPC
Trigger: ACATGGCAGGTGACCTGCCCAGTGATGAAGATGAAG...GCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGGCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp CTTCTGCCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCGAGGTGACAGACCTCTaGGACAAAGACTCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: LLPRAGHQNHTSGCSLCCEVTDL*DKDSVE
Trigger: CTCAACAGAGTCTTTGTCCCAGAGGTCTGTCACCTC...GCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGGCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp CTTCTGCCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCTCATCTCATCATCGCTaGCTTTGTCCTCCCGATCCA +
Preference number: 4 (lower is better)
Translates to: LLPRAGHQNHTSGCSLCCSSHHR*LCPPDP
Trigger: TGGATCGGGAGGACAAAGCCAGCGATGATGAGATGA...GCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGGCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp CTTCTGCCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCACTCACAGTGGAACTTaGGGATGTGTCTGTACAGGT +
Preference number: 4 (lower is better)
Translates to: LLPRAGHQNHTSGCSLCCTHSGT*GCVCTG
Trigger: ACCTGTACAGACACATCCGCAAGTTCCACTGTGAGT...GCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGGCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp AACACTCGGCTGGGTACGTGTGTACACCTAAACTCTGAGCTGGCATGGGTTCTGATGCCCCCTTCCACCTaGACCCGCTCGCTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: NTRLGTCVHLNSELAWVLMPPST*TRSLSG
Trigger: CCCAGAGAGCGAGCGGGTCCAGGTGGAAGGGGGCAT...CAGAACCCATGCCAGCTCAGAGTTTAGGTGTACACACGTACCCAGCCGAGTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp AACACTCGGCTGGGTACGTGTGTACACCTAAACTCTGAGCTGGCATGGGTTCTGAGCACGTGGGCACATTaGCATCGGCGGCAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: NTRLGTCVHLNSELAWVLSTWAH*HRRQAC
Trigger: GCAAGCCTGCCGCCGATGTCAATGTGCCCACGTGCT...CAGAACCCATGCCAGCTCAGAGTTTAGGTGTACACACGTACCCAGCCGAGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACATGTCGCTGTTCAGATaGACAATGTCTCTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYMSLFR*TMSLLS
Trigger: GGACAAAAGAGACATTGTTCATCTGAACAGCGACAT...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp AACACTCGGCTGGGTACGTGTGTACACCTAAACTCTGAGCTGGCATGGGTTCTGAAGCCCTGGTGCCTCTaGTCGCTCAGACACTGCAGC +
Preference number: 4 (lower is better)
Translates to: NTRLGTCVHLNSELAWVLKPWCL*SLRHCS
Trigger: GCTGCAGTGTCTGAGCGAGCAGAGGCACCAGGGCTT...CAGAACCCATGCCAGCTCAGAGTTTAGGTGTACACACGTACCCAGCCGAGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp CTTCTGCCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCACTCTCTTTCACAGTaGTATGTTCCATGTCATAGT +
Preference number: 4 (lower is better)
Translates to: LLPRAGHQNHTSGCSLCCHSLSQ*YVPCHS
Trigger: ACTATGACATGGAACATAGCACTGTGAAAGAGAGTG...GCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGGCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp AACACTCGGCTGGGTACGTGTGTACACCTAAACTCTGAGCTGGCATGGGTTCTGTTTTTCCAGCTGCTGTaGCGTGTGGCTCGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: NTRLGTCVHLNSELAWVLFFQLL*RVARPL
Trigger: GAGAGGCCGAGCCACACGCCACAGCAGCTGGAAAAA...CAGAACCCATGCCAGCTCAGAGTTTAGGTGTACACACGTACCCAGCCGAGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
3UTR CAA 72 bp TCGCTCTCTGGGGTCATCATCTCATCATCGCTGGCTTaGTCCTCCCGATCCAGTTCCCTTAAGACCGAGTCC +
Preference number: 4 (lower is better)
Translates to: SLSGVIISSSLA*SSRSSSLKTES
Trigger: GGACTCGGTCTTAAGGGAACTGGATCGGGAGGACAAAGCCAGCGATGATGAGATGATGACCCCAGAGAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
CDS-3UTR TCA 90 bp AACACTCGGCTGGGTACGTGTGTACACCTAAACTCTGAGCTGGCATGGGTTCTGAATCCCTCACGGAGGTaGCAGACCTCTGGGACAAAG +
Preference number: 4 (lower is better)
Translates to: NTRLGTCVHLNSELAWVLNPSRR*QTSGTK
Trigger: CTTTGTCCCAGAGGTCTGTCACCTCCGTGAGGGATT...CAGAACCCATGCCAGCTCAGAGTTTAGGTGTACACACGTACCCAGCCGAGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp CAAAACAAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTATGCACAGGGGGCACATaGAGATCTGGCCTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: QNKTVWSTGKALKTMQCVCTGGT*RSGLRG
Trigger: GCCCCGCAGGCCAGATCTTCATGTGCCCCCTGTGCA...TACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTTGTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp AACCTTCACAGAGACAGTCCCAGTGACCCAGTGTACTGTCAGATTTCTCTCACTAGCACGTGGGCACATTaGCATCGGCGGCAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: NLHRDSPSDPVYCQISLTSTWAH*HRRQAC
Trigger: GCAAGCCTGCCGCCGATGTCAATGTGCCCACGTGCT...AGTGAGAGAAATCTGACAGTACACTGGGTCACTGGGACTGTCTCTGTGAAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp AACACTCGGCTGGGTACGTGTGTACACCTAAACTCTGAGCTGGCATGGGTTCTGCAAAGAAAGCCCTGGTaGCTCTGCTCGCTCAGACAC +
Preference number: 4 (lower is better)
Translates to: NTRLGTCVHLNSELAWVLQRKPW*LCSLRH
Trigger: GTGTCTGAGCGAGCAGAGGCACCAGGGCTTTCTTTG...CAGAACCCATGCCAGCTCAGAGTTTAGGTGTACACACGTACCCAGCCGAGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp ACCTTCACAGAGACAGTCCCAGTGACCCAGTGTACTGTCAGATTTCTCTCACTGCAGAACAGCTCGGTGTaGCCGGAACTGGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: TFTETVPVTQCTVRFLSLQNSSV*PELGIS
Trigger: GGAGATGCCCAGTTCCGGGCACACCGAGCTGTTCTG...CAGTGAGAGAAATCTGACAGTACACTGGGTCACTGGGACTGTCTCTGTGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp AACACTCGGCTGGGTACGTGTGTACACCTAAACTCTGAGCTGGCATGGGTTCTGTACTGTTTTTCCAGCTaGTGTGGCGTGTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: NTRLGTCVHLNSELAWVLYCFSS*CGVWLG
Trigger: GCCGAGCCACACGCCACAGCAGCTGGAAAAACAGTA...CAGAACCCATGCCAGCTCAGAGTTTAGGTGTACACACGTACCCAGCCGAGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp AACACTCGGCTGGGTACGTGTGTACACCTAAACTCTGAGCTGGCATGGGTTCTGAGGAGCCAGGTGGGCTaGCTCATACTGTACCCTGTT +
Preference number: 4 (lower is better)
Translates to: NTRLGTCVHLNSELAWVLRSQVG*LILYPV
Trigger: AACAGGGTACAGTATGAGCCAGCCCACCTGGCTCCT...CAGAACCCATGCCAGCTCAGAGTTTAGGTGTACACACGTACCCAGCCGAGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp CTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGTGACTGCACAGGGGGCACATaGAGATCTGGCCTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: LQYPFSSQANLHRDSPSDCTGGT*RSGLRG
Trigger: GCCCCGCAGGCCAGATCTTCATGTGCCCCCTGTGCA...GTCACTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp AACACTCGGCTGGGTACGTGTGTACACCTAAACTCTGAGCTGGCATGGGTTCTGTGCTCGCTCAGACACTaGAGCAAATGTCTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: NTRLGTCVHLNSELAWVLCSLRH*SKCLLW
Trigger: CCACAGCAGACATTTGCTGCAGTGTCTGAGCGAGCA...CAGAACCCATGCCAGCTCAGAGTTTAGGTGTACACACGTACCCAGCCGAGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp AACCTTCACAGAGACAGTCCCAGTGACCCAGTGTACTGTCAGATTTCTCTCACTCTGCCATGTGGCTGCTaGCGTCTGAGAGGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: NLHRDSPSDPVYCQISLTLPCGC*RLRGSR
Trigger: TCGAGAGCCTCTCAGACGGCAGCAGCCACATGGCAG...AGTGAGAGAAATCTGACAGTACACTGGGTCACTGGGACTGTCTCTGTGAAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp GAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGCGCCAGCCTGGGGGATaGCTGCTGAGTCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: EAAISFFISSKPSQRQSQRQPGG*LLSLRA
Trigger: TGCCCTCAGACTCAGCAGGCATCCCCCAGGCTGGCG...CTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp ACCTTCACAGAGACAGTCCCAGTGACCCAGTGTACTGTCAGATTTCTCTCACTGCTACGGATGCCATCCTaGTCTCGGAAGTGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: TFTETVPVTQCTVRFLSLLRMPS*SRKCVL
Trigger: GAGCACGCACTTCCGAGAGCAGGATGGCATCCGTAG...CAGTGAGAGAAATCTGACAGTACACTGGGTCACTGGGACTGTCTCTGTGAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp TGCCCCCTTCCACCTGGACCCGCTCGCTCTCTGGGGTCATCATCTCATCATCGCCCAAGTCCCTTTTGCTaGGTAGAATGTTCAATTTGT +
Preference number: 4 (lower is better)
Translates to: CPLPPGPARSLGSSSHHRPSPFC*VECSIC
Trigger: ACAAATTGAACATTCTACCCAGCAAAAGGGACTTGG...GCGATGATGAGATGATGACCCCAGAGAGCGAGCGGGTCCAGGTGGAAGGGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
CDS-3UTR CCA 90 bp CTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGTGACGCCTCTCCGCCAGCCTaGGGGATGCCTGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: LQYPFSSQANLHRDSPSDASPPA*GMPAES
Trigger: AGACTCAGCAGGCATCCCCCAGGCTGGCGGAGAGGC...GTCACTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp CTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGTGACATGCCCCCTTCCACCTaGACCCGCTCGCTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LQYPFSSQANLHRDSPSDMPPST*TRSLSG
Trigger: CCCAGAGAGCGAGCGGGTCCAGGTGGAAGGGGGCAT...GTCACTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
3UTR CAA 72 bp CAGTCTCTGACAGTGGGCAAGCTCAGCGCTTCACTTTaGACCGACAAGGAGTTCACCAACTCACAGTGGAAC +
Preference number: 4 (lower is better)
Translates to: QSLTVGKLSASL*TDKEFTNSQWN
Trigger: GTTCCACTGTGAGTTGGTGAACTCCTTGTCGGTCAAAAGTGAAGCGCTGAGCTTGCCCACTGTCAGAGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
CDS-3UTR TCA 90 bp GGAAAAACAACCACTGTTTCCCATGCTACTCCCATAGACCTTATTTGTAAGTGCTGCACAGGGGGCACATaGAGATCTGGCCTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: GKTTTVSHATPIDLICKCCTGGT*RSGLRG
Trigger: GCCCCGCAGGCCAGATCTTCATGTGCCCCCTGTGCA...GCACTTACAAATAAGGTCTATGGGAGTAGCATGGGAAACAGTGGTTGTTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp AAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTACAAAAGCTGCCATGTGGCTGCTaGCGTCTGAGAGGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: KTVWSTGKALKTMQCVQKLPCGC*RLRGSR
Trigger: TCGAGAGCCTCTCAGACGGCAGCAGCCACATGGCAG...CTTTTGTACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp GAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGGTGCTCAGGTGGATCTaGAGGATGTGGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: EAAISFFISSKPSQRQSQVLRWI*RMWGLG
Trigger: CCCCAGCCCCCACATCCTGCAGATCCACCTGAGCAC...CTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp AACCTTCACAGAGACAGTCCCAGTGACCCAGTGTACTGTCAGATTTCTCTCACTTCCTGCTCTCGGAAGTaGGTGCTCAGGTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: NLHRDSPSDPVYCQISLTSCSRK*VLRWIC
Trigger: GCAGATCCACCTGAGCACGCACTTCCGAGAGCAGGA...AGTGAGAGAAATCTGACAGTACACTGGGTCACTGGGACTGTCTCTGTGAAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp TGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTTGCTCTAGTTTCTGCGCTCGCACCACTTaGAGGCATGGGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: WPNPQKKDSSLLVTCSSFCARTT*RHGASR
Trigger: GCGAGAAGCCCCATGCCTGCAAGTGGTGCGAGCGCA...GAAACTAGAGCAAGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp AACACTCGGCTGGGTACGTGTGTACACCTAAACTCTGAGCTGGCATGGGTTCTGCTTCATCTTCATCACTaGGCAGGTCACCTGCCATGT +
Preference number: 4 (lower is better)
Translates to: NTRLGTCVHLNSELAWVLLHLHH*AGHLPC
Trigger: ACATGGCAGGTGACCTGCCCAGTGATGAAGATGAAG...CAGAACCCATGCCAGCTCAGAGTTTAGGTGTACACACGTACCCAGCCGAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp GGAAAAACAACCACTGTTTCCCATGCTACTCCCATAGACCTTATTTGTAAGTGCGCCTCTCCGCCAGCCTaGGGGATGCCTGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: GKTTTVSHATPIDLICKCASPPA*GMPAES
Trigger: AGACTCAGCAGGCATCCCCCAGGCTGGCGGAGAGGC...GCACTTACAAATAAGGTCTATGGGAGTAGCATGGGAAACAGTGGTTGTTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp ACTGCTGAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGGCCTCTCCGCCAGCCTaGGGGATGCCTGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: TAEAAISFFISSKPSQRQASPPA*GMPAES
Trigger: AGACTCAGCAGGCATCCCCCAGGCTGGCGGAGAGGC...CTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTCAGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp AACACTCGGCTGGGTACGTGTGTACACCTAAACTCTGAGCTGGCATGGGTTCTGTCATCTCATCATCGCTaGCTTTGTCCTCCCGATCCA +
Preference number: 4 (lower is better)
Translates to: NTRLGTCVHLNSELAWVLSSHHR*LCPPDP
Trigger: TGGATCGGGAGGACAAAGCCAGCGATGATGAGATGA...CAGAACCCATGCCAGCTCAGAGTTTAGGTGTACACACGTACCCAGCCGAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp AACACTCGGCTGGGTACGTGTGTACACCTAAACTCTGAGCTGGCATGGGTTCTGGTTTCCCTTCGTACATaGATTCAAGCAGGAGAGCGA +
Preference number: 4 (lower is better)
Translates to: NTRLGTCVHLNSELAWVLVSLRT*IQAGER
Trigger: TCGCTCTCCTGCTTGAATTCATGTACGAAGGGAAAC...CAGAACCCATGCCAGCTCAGAGTTTAGGTGTACACACGTACCCAGCCGAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp CAAAACAAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTAGGACAAAGACTCTGTTaGGCTGCAGGGGCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: QNKTVWSTGKALKTMQCVGQRLC*AAGAGY
Trigger: GTAGCCAGCCCCTGCAGCTCAACAGAGTCTTTGTCC...TACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTTGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp TGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTTGCTCTAGTTTCCTGCCATGTGGCTGCTaGCGTCTGAGAGGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: WPNPQKKDSSLLVTCSSFLPCGC*RLRGSR
Trigger: TCGAGAGCCTCTCAGACGGCAGCAGCCACATGGCAG...GAAACTAGAGCAAGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp TATTGGCTAACTTGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTACTGGGCAGGTCACCTaGCATGTGGCTGCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: YWLTWPNPQKKDSSLLVTTGQVT*HVAAAV
Trigger: GACGGCAGCAGCCACATGGCAGGTGACCTGCCCAGT...AGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp ACTGCTGAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGACTGGGCAGGTCACCTaGCATGTGGCTGCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: TAEAAISFFISSKPSQRQTGQVT*HVAAAV
Trigger: GACGGCAGCAGCCACATGGCAGGTGACCTGCCCAGT...CTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTCAGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp TGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTTGCTCTAGTTTCGCAGACTGTTCTCCATaGCCCCTTCCACCTGGACCC +
Preference number: 4 (lower is better)
Translates to: WPNPQKKDSSLLVTCSSFADCSP*PLPPGP
Trigger: GGGTCCAGGTGGAAGGGGGCATGGAGAACAGTCTGC...GAAACTAGAGCAAGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp AAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTACAAAAGCTACGGATGCCATCCTaGTCTCGGAAGTGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: KTVWSTGKALKTMQCVQKLRMPS*SRKCVL
Trigger: GAGCACGCACTTCCGAGAGCAGGATGGCATCCGTAG...CTTTTGTACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp ACCTTCACAGAGACAGTCCCAGTGACCCAGTGTACTGTCAGATTTCTCTCACTGTCACAAAGAAAGCCCTaGTGCCTCTGCTCGCTCAGA +
Preference number: 4 (lower is better)
Translates to: TFTETVPVTQCTVRFLSLSQRKP*CLCSLR
Trigger: TCTGAGCGAGCAGAGGCACCAGGGCTTTCTTTGTGA...CAGTGAGAGAAATCTGACAGTACACTGGGTCACTGGGACTGTCTCTGTGAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp GAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGAGGTCACCTGCCATGTaGCTGCTGCCGTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: EAAISFFISSKPSQRQSQRSPAM*LLPSER
Trigger: CCTCTCAGACGGCAGCAGCCACATGGCAGGTGACCT...CTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp ACCTTCACAGAGACAGTCCCAGTGACCCAGTGTACTGTCAGATTTCTCTCACTGTTGAGCTGCAGGGGCTaGCTACTGTTTTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TFTETVPVTQCTVRFLSLLSCRG*LLFFQL
Trigger: CAGCTGGAAAAACAGTAGCCAGCCCCTGCAGCTCAA...CAGTGAGAGAAATCTGACAGTACACTGGGTCACTGGGACTGTCTCTGTGAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp CAAAACAAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTACTCAGAGGAGCCAGGTaGGCTGGCTCATACTGTACC +
Preference number: 4 (lower is better)
Translates to: QNKTVWSTGKALKTMQCVLRGAR*AGSYCT
Trigger: GGTACAGTATGAGCCAGCCCACCTGGCTCCTCTGAG...TACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTTGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp CAAAACAAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTAGGGCACATGAAGATCTaGCCTGCGGGGCTCAGGATA +
Preference number: 4 (lower is better)
Translates to: QNKTVWSTGKALKTMQCVGHMKI*PAGLRI
Trigger: TATCCTGAGCCCCGCAGGCCAGATCTTCATGTGCCC...TACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTTGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp AAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTACAAAAGGGGCACATGAAGATCTaGCCTGCGGGGCTCAGGATA +
Preference number: 4 (lower is better)
Translates to: KTVWSTGKALKTMQCVQKGHMKI*PAGLRI
Trigger: TATCCTGAGCCCCGCAGGCCAGATCTTCATGTGCCC...CTTTTGTACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp CAAAACAAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTAAAGTGCGTGCTCAGGTaGATCTGCAGGATGTGGGGG +
Preference number: 4 (lower is better)
Translates to: QNKTVWSTGKALKTMQCVKCVLR*ICRMWG
Trigger: CCCCCACATCCTGCAGATCCACCTGAGCACGCACTT...TACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTTGTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
3UTR CAA 72 bp AGAGGAGCCAGGTGGGCTGGCTCATACTGTACCCTGTaGTTAGTGCTCACACTCTCTTTCACAGTGCTATGT +
Preference number: 4 (lower is better)
Translates to: RGARWAGSYCTL*LVLTLSFTVLC
Trigger: ACATAGCACTGTGAAAGAGAGTGTGAGCACTAACAACAGGGTACAGTATGAGCCAGCCCACCTGGCTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
CDS-3UTR TCA 90 bp TGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTTGCTCTAGTTTCGGACAAAGACTCTGTTaGGCTGCAGGGGCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: WPNPQKKDSSLLVTCSSFGQRLC*AAGAGY
Trigger: GTAGCCAGCCCCTGCAGCTCAACAGAGTCTTTGTCC...GAAACTAGAGCAAGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp ACCTTCACAGAGACAGTCCCAGTGACCCAGTGTACTGTCAGATTTCTCTCACTGTCAGCGCTTCACTTTTaGCCGACAAGGAGTTCACCA +
Preference number: 4 (lower is better)
Translates to: TFTETVPVTQCTVRFLSLSALHF*PTRSSP
Trigger: TGGTGAACTCCTTGTCGGTCAAAAGTGAAGCGCTGA...CAGTGAGAGAAATCTGACAGTACACTGGGTCACTGGGACTGTCTCTGTGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp CTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGTGACCTAAGGTCCAGTCTCTaGCAGTGGGCAAGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: LQYPFSSQANLHRDSPSDLRSSL*QWASSA
Trigger: CGCTGAGCTTGCCCACTGTCAGAGACTGGACCTTAG...GTCACTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp CAAAACAAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTACAAAGAAAGCCCTGGTaGCTCTGCTCGCTCAGACAC +
Preference number: 4 (lower is better)
Translates to: QNKTVWSTGKALKTMQCVQRKPW*LCSLRH
Trigger: GTGTCTGAGCGAGCAGAGGCACCAGGGCTTTCTTTG...TACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTTGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp TTGACCGACAAGGAGTTCACCAACTCACAGTGGAACTTGCGGATGTGTCTGTACCTCCCACCAGAACAGTaGAGTCACAAAGAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LTDKEFTNSQWNLRMCLYLPPEQ*SHKESP
Trigger: AGGGCTTTCTTTGTGACTGCACTGTTCTGGTGGGAG...GTACAGACACATCCGCAAGTTCCACTGTGAGTTGGTGAACTCCTTGTCGGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
CDS-3UTR GCA 90 bp GTGAAAGCGTTTGTGACAGAACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGCGCCAGCCTGGGGGATaGCTGCTGAGTCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: VKAFVTEPFVEKVLLANLRQPGG*LLSLRA
Trigger: TGCCCTCAGACTCAGCAGGCATCCCCCAGGCTGGCG...CAAGTTAGCCAATAAAACCTTCTCAACAAATGGTTCTGTCACAAACGCTTTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp GTTCTGTGCAATTACAAGTGTGGTATGAATGCACACTGCACATGCAATTCTTTACGCCAGCCTGGGGGATaGCTGCTGAGTCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: VLCNYKCGMNAHCTCNSLRQPGG*LLSLRA
Trigger: TGCCCTCAGACTCAGCAGGCATCCCCCAGGCTGGCG...TAAAGAATTGCATGTGCAGTGTGCATTCATACCACACTTGTAATTGCACAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp GGAAAAACAACCACTGTTTCCCATGCTACTCCCATAGACCTTATTTGTAAGTGCGCAGACTGTTCTCCATaGCCCCTTCCACCTGGACCC +
Preference number: 4 (lower is better)
Translates to: GKTTTVSHATPIDLICKCADCSP*PLPPGP
Trigger: GGGTCCAGGTGGAAGGGGGCATGGAGAACAGTCTGC...GCACTTACAAATAAGGTCTATGGGAGTAGCATGGGAAACAGTGGTTGTTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp GAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGGCTCTCGGAAGTGCGTaGTCAGGTGGATCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: EAAISFFISSKPSQRQSQALGSA*SGGSAG
Trigger: TCCTGCAGATCCACCTGAGCACGCACTTCCGAGAGC...CTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp ACTGCTGAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTACAGGTCTCCGGACTaGGTGAACCTGCGCTCGCAC +
Preference number: 4 (lower is better)
Translates to: TAEAAISFFISSKPSQRQYRSPD*VNLRSH
Trigger: GTGCGAGCGCAGGTTCACGCAGTCCGGAGACCTGTA...CTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTCAGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp ACTGCTGAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGAGGTCACCTGCCATGTaGCTGCTGCCGTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: TAEAAISFFISSKPSQRQRSPAM*LLPSER
Trigger: CCTCTCAGACGGCAGCAGCCACATGGCAGGTGACCT...CTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTCAGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp GTGCAAAAACAAGTTAAGATCCCAACTTTTCAGTTCCAGGAAACAAGACTGCTTGCCTCTCCGCCAGCCTaGGGGATGCCTGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: VQKQVKIPTFQFQETRLLASPPA*GMPAES
Trigger: AGACTCAGCAGGCATCCCCCAGGCTGGCGGAGAGGC...AAGCAGTCTTGTTTCCTGGAACTGAAAAGTTGGGATCTTAACTTGTTTTTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp AACTTTTCAGTTCCAGGAAACAAGACTGCTTTTAGACCGTACCACAACTATATAAGCTGCTGTGGCGTGTaGCTCGGCCTCTCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: NFSVPGNKTAFRPYHNYISCCGV*LGLSAS
Trigger: GCTGGCGGAGAGGCCGAGCCACACGCCACAGCAGCT...TATATAGTTGTGGTACGGTCTAAAAGCAGTCTTGTTTCCTGGAACTGAAAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp CAAAACAAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTAGACCCGCTCGCTCTCTaGGGTCATCATCTCATCATC +
Preference number: 4 (lower is better)
Translates to: QNKTVWSTGKALKTMQCVDPLAL*GHHLII
Trigger: GATGATGAGATGATGACCCCAGAGAGCGAGCGGGTC...TACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTTGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp ACCTTCACAGAGACAGTCCCAGTGACCCAGTGTACTGTCAGATTTCTCTCACTGGTTTCCCTTCGTACATaGATTCAAGCAGGAGAGCGA +
Preference number: 4 (lower is better)
Translates to: TFTETVPVTQCTVRFLSLVSLRT*IQAGER
Trigger: TCGCTCTCCTGCTTGAATTCATGTACGAAGGGAAAC...CAGTGAGAGAAATCTGACAGTACACTGGGTCACTGGGACTGTCTCTGTGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp TATTGGCTAACTTGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTGGACAAAGACTCTGTTaGGCTGCAGGGGCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: YWLTWPNPQKKDSSLLVTGQRLC*AAGAGY
Trigger: GTAGCCAGCCCCTGCAGCTCAACAGAGTCTTTGTCC...AGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp TGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTTGCTCTAGTTTCCTGAAAGGCTGGACTTaGCAGACAGGTCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: WPNPQKKDSSLLVTCSSFLKGWT*QTGPAH
Trigger: GTGTGCTGGACCTGTCTGTCAAGTCCAGCCTTTCAG...GAAACTAGAGCAAGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp GTGCAAAAACAAGTTAAGATCCCAACTTTTCAGTTCCAGGAAACAAGACTGCTTAGCACGTGGGCACATTaGCATCGGCGGCAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: VQKQVKIPTFQFQETRLLSTWAH*HRRQAC
Trigger: GCAAGCCTGCCGCCGATGTCAATGTGCCCACGTGCT...AAGCAGTCTTGTTTCCTGGAACTGAAAAGTTGGGATCTTAACTTGTTTTTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp TATTGGCTAACTTGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTTCCTCTCGTGGCGCTTaGGGGTGTACATGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: YWLTWPNPQKKDSSLLVTSSRGA*GCTCRR
Trigger: TCTCCTGCATGTACACCCTCAAGCGCCACGAGAGGA...AGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp TATTGGCTAACTTGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTCTAAGGTCCAGTCTCTaGCAGTGGGCAAGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: YWLTWPNPQKKDSSLLVTLRSSL*QWASSA
Trigger: CGCTGAGCTTGCCCACTGTCAGAGACTGGACCTTAG...AGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp CTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGTGACCAAAGAAAGCCCTGGTaGCTCTGCTCGCTCAGACAC +
Preference number: 4 (lower is better)
Translates to: LQYPFSSQANLHRDSPSDQRKPW*LCSLRH
Trigger: GTGTCTGAGCGAGCAGAGGCACCAGGGCTTTCTTTG...GTCACTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp GTGAAAGCGTTTGTGACAGAACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGACTGGGCAGGTCACCTaGCATGTGGCTGCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: VKAFVTEPFVEKVLLANLTGQVT*HVAAAV
Trigger: GACGGCAGCAGCCACATGGCAGGTGACCTGCCCAGT...CAAGTTAGCCAATAAAACCTTCTCAACAAATGGTTCTGTCACAAACGCTTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp AAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTACAAAAGCATGAAGATCTGGCCTaGGGGGCTCAGGATATTGGA +
Preference number: 4 (lower is better)
Translates to: KTVWSTGKALKTMQCVQKHEDLA*GAQDIG
Trigger: TCCAATATCCTGAGCCCCGCAGGCCAGATCTTCATG...CTTTTGTACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp ACTGCTGAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCTGCTCTCGGAAGTaGGTGCTCAGGTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: TAEAAISFFISSKPSQRQSCSRK*VLRWIC
Trigger: GCAGATCCACCTGAGCACGCACTTCCGAGAGCAGGA...CTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTCAGCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp TATTGGCTAACTTGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTCTACGGATGCCATCCTaGTCTCGGAAGTGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: YWLTWPNPQKKDSSLLVTLRMPS*SRKCVL
Trigger: GAGCACGCACTTCCGAGAGCAGGATGGCATCCGTAG...AGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp GTTCTGTGCAATTACAAGTGTGGTATGAATGCACACTGCACATGCAATTCTTTATGCGCTCGCACCACTTaGAGGCATGGGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: VLCNYKCGMNAHCTCNSLCARTT*RHGASR
Trigger: GCGAGAAGCCCCATGCCTGCAAGTGGTGCGAGCGCA...TAAAGAATTGCATGTGCAGTGTGCATTCATACCACACTTGTAATTGCACAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp AAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTACAAAAGTTGAGCTGCAGGGGCTaGCTACTGTTTTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: KTVWSTGKALKTMQCVQKLSCRG*LLFFQL
Trigger: CAGCTGGAAAAACAGTAGCCAGCCCCTGCAGCTCAA...CTTTTGTACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp CAAAACAAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTATTGAGCTGCAGGGGCTaGCTACTGTTTTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QNKTVWSTGKALKTMQCVLSCRG*LLFFQL
Trigger: CAGCTGGAAAAACAGTAGCCAGCCCCTGCAGCTCAA...TACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTTGTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp GGAAAAACAACCACTGTTTCCCATGCTACTCCCATAGACCTTATTTGTAAGTGCCTCAGAGGAGCCAGGTaGGCTGGCTCATACTGTACC +
Preference number: 4 (lower is better)
Translates to: GKTTTVSHATPIDLICKCLRGAR*AGSYCT
Trigger: GGTACAGTATGAGCCAGCCCACCTGGCTCCTCTGAG...GCACTTACAAATAAGGTCTATGGGAGTAGCATGGGAAACAGTGGTTGTTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp CTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGTGACCGGGGCTCAGGATATTaGAGACGTAGGGAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: LQYPFSSQANLHRDSPSDRGSGY*RRREAD
Trigger: GTCTGCTTCCCTACGTCTCCAATATCCTGAGCCCCG...GTCACTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp GAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGCGGGGCTCAGGATATTaGAGACGTAGGGAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: EAAISFFISSKPSQRQSQRGSGY*RRREAD
Trigger: GTCTGCTTCCCTACGTCTCCAATATCCTGAGCCCCG...CTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp GGAAAAACAACCACTGTTTCCCATGCTACTCCCATAGACCTTATTTGTAAGTGCGGGCACATGAAGATCTaGCCTGCGGGGCTCAGGATA +
Preference number: 4 (lower is better)
Translates to: GKTTTVSHATPIDLICKCGHMKI*PAGLRI
Trigger: TATCCTGAGCCCCGCAGGCCAGATCTTCATGTGCCC...GCACTTACAAATAAGGTCTATGGGAGTAGCATGGGAAACAGTGGTTGTTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp CTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGTGACGCAGGATGTGGGGGCTaGGGAAGACTTTGTTGCACA +
Preference number: 4 (lower is better)
Translates to: LQYPFSSQANLHRDSPSDAGCGG*GRLCCT
Trigger: TGTGCAACAAAGTCTTCCCCAGCCCCCACATCCTGC...GTCACTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp GGAAAAACAACCACTGTTTCCCATGCTACTCCCATAGACCTTATTTGTAAGTGCAAGTGCGTGCTCAGGTaGATCTGCAGGATGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GKTTTVSHATPIDLICKCKCVLR*ICRMWG
Trigger: CCCCCACATCCTGCAGATCCACCTGAGCACGCACTT...GCACTTACAAATAAGGTCTATGGGAGTAGCATGGGAAACAGTGGTTGTTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp CAAAACAAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTAGAAATACATGCTGCATaGAGCCAGAACAGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: QNKTVWSTGKALKTMQCVEIHAA*SQNSSV
Trigger: CACCGAGCTGTTCTGGCTTCATGCAGCATGTATTTC...TACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTTGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp TATTGGCTAACTTGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTAATCCCTCACGGAGGTaGCAGACCTCTGGGACAAAG +
Preference number: 4 (lower is better)
Translates to: YWLTWPNPQKKDSSLLVTNPSRR*QTSGTK
Trigger: CTTTGTCCCAGAGGTCTGTCACCTCCGTGAGGGATT...AGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp ACTGCTGAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGCTGAAAGGCTGGACTTaGCAGACAGGTCCAGCACAC +
Preference number: 4 (lower is better)
Translates to: TAEAAISFFISSKPSQRQLKGWT*QTGPAH
Trigger: GTGTGCTGGACCTGTCTGTCAAGTCCAGCCTTTCAG...CTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTCAGCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp GTGAAAGCGTTTGTGACAGAACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGAAGCCCTGGTGCCTCTaGTCGCTCAGACACTGCAGC +
Preference number: 4 (lower is better)
Translates to: VKAFVTEPFVEKVLLANLKPWCL*SLRHCS
Trigger: GCTGCAGTGTCTGAGCGAGCAGAGGCACCAGGGCTT...CAAGTTAGCCAATAAAACCTTCTCAACAAATGGTTCTGTCACAAACGCTTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp GTTCTGTGCAATTACAAGTGTGGTATGAATGCACACTGCACATGCAATTCTTTAAAGCCCTGGTGCCTCTaGTCGCTCAGACACTGCAGC +
Preference number: 4 (lower is better)
Translates to: VLCNYKCGMNAHCTCNSLKPWCL*SLRHCS
Trigger: GCTGCAGTGTCTGAGCGAGCAGAGGCACCAGGGCTT...TAAAGAATTGCATGTGCAGTGTGCATTCATACCACACTTGTAATTGCACAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp GTTCTGTGCAATTACAAGTGTGGTATGAATGCACACTGCACATGCAATTCTTTACAGAACAGCTCGGTGTaGCCGGAACTGGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: VLCNYKCGMNAHCTCNSLQNSSV*PELGIS
Trigger: GGAGATGCCCAGTTCCGGGCACACCGAGCTGTTCTG...TAAAGAATTGCATGTGCAGTGTGCATTCATACCACACTTGTAATTGCACAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp AAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTACAAAAGAAGACTCTGTTGAGCTaGAGGGGCTGGCTACTGTTT +
Preference number: 4 (lower is better)
Translates to: KTVWSTGKALKTMQCVQKKTLLS*RGWLLF
Trigger: AAACAGTAGCCAGCCCCTGCAGCTCAACAGAGTCTT...CTTTTGTACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp TGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTTGCTCTAGTTTCCACACAGTCAACATCTaGCGAATCCCTCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: WPNPQKKDSSLLVTCSSFHTVNI*RIPHGG
Trigger: ACCTCCGTGAGGGATTCGGCAGATGTTGACTGTGTG...GAAACTAGAGCAAGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp GAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGCACACAGTCAACATCTaGCGAATCCCTCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: EAAISFFISSKPSQRQSQHTVNI*RIPHGG
Trigger: ACCTCCGTGAGGGATTCGGCAGATGTTGACTGTGTG...CTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp TGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTTGCTCTAGTTTCTTCTCCACCTTCACCTaGACCAGGTTGCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: WPNPQKKDSSLLVTCSSFFSTFT*TRLLLS
Trigger: GCTGAGAAGCAACCTGGTGCAGGTGAAGGTGGAGAA...GAAACTAGAGCAAGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp CTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGTGACTTCTCCACCTTCACCTaGACCAGGTTGCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LQYPFSSQANLHRDSPSDFSTFT*TRLLLS
Trigger: GCTGAGAAGCAACCTGGTGCAGGTGAAGGTGGAGAA...GTCACTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp AACACTCGGCTGGGTACGTGTGTACACCTAAACTCTGAGCTGGCATGGGTTCTGCACTCTCTTTCACAGTaGTATGTTCCATGTCATAGT +
Preference number: 4 (lower is better)
Translates to: NTRLGTCVHLNSELAWVLHSLSQ*YVPCHS
Trigger: ACTATGACATGGAACATAGCACTGTGAAAGAGAGTG...CAGAACCCATGCCAGCTCAGAGTTTAGGTGTACACACGTACCCAGCCGAGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp GTTCTGTGCAATTACAAGTGTGGTATGAATGCACACTGCACATGCAATTCTTTAGCAGACTGTTCTCCATaGCCCCTTCCACCTGGACCC +
Preference number: 4 (lower is better)
Translates to: VLCNYKCGMNAHCTCNSLADCSP*PLPPGP
Trigger: GGGTCCAGGTGGAAGGGGGCATGGAGAACAGTCTGC...TAAAGAATTGCATGTGCAGTGTGCATTCATACCACACTTGTAATTGCACAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp TGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTTGCTCTAGTTTCCATGAAGATCTGGCCTaGGGGGCTCAGGATATTGGA +
Preference number: 4 (lower is better)
Translates to: WPNPQKKDSSLLVTCSSFHEDLA*GAQDIG
Trigger: TCCAATATCCTGAGCCCCGCAGGCCAGATCTTCATG...GAAACTAGAGCAAGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp AACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGGCCTAACCCTCAAAAGAAAGTGCTCAGGTGGATCTaGAGGATGTGGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: NHLLRRFYWLTWPNPQKKVLRWI*RMWGLG
Trigger: CCCCAGCCCCCACATCCTGCAGATCCACCTGAGCAC...TTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATAAAACCTTCTCAACAAATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp GTTCTGTGCAATTACAAGTGTGGTATGAATGCACACTGCACATGCAATTCTTTATACAGGTCTCCGGACTaGGTGAACCTGCGCTCGCAC +
Preference number: 4 (lower is better)
Translates to: VLCNYKCGMNAHCTCNSLYRSPD*VNLRSH
Trigger: GTGCGAGCGCAGGTTCACGCAGTCCGGAGACCTGTA...TAAAGAATTGCATGTGCAGTGTGCATTCATACCACACTTGTAATTGCACAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp CAAAACAAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTAACATGTGGAGATAACTaGCAGCTGCTAGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: QNKTVWSTGKALKTMQCVTCGDN*QLLARP
Trigger: AGGACGTGCTAGCAGCTGCCAGTTATCTCCACATGT...TACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTTGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp GTTCTGTGCAATTACAAGTGTGGTATGAATGCACACTGCACATGCAATTCTTTAAGGTCACCTGCCATGTaGCTGCTGCCGTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: VLCNYKCGMNAHCTCNSLRSPAM*LLPSER
Trigger: CCTCTCAGACGGCAGCAGCCACATGGCAGGTGACCT...TAAAGAATTGCATGTGCAGTGTGCATTCATACCACACTTGTAATTGCACAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp AAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTACAAAAGCTTCATCTTCATCACTaGGCAGGTCACCTGCCATGT +
Preference number: 4 (lower is better)
Translates to: KTVWSTGKALKTMQCVQKLHLHH*AGHLPC
Trigger: ACATGGCAGGTGACCTGCCCAGTGATGAAGATGAAG...CTTTTGTACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp AAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTACAAAAGGAGGTGACAGACCTCTaGGACAAAGACTCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: KTVWSTGKALKTMQCVQKEVTDL*DKDSVE
Trigger: CTCAACAGAGTCTTTGTCCCAGAGGTCTGTCACCTC...CTTTTGTACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp GGAAAAACAACCACTGTTTCCCATGCTACTCCCATAGACCTTATTTGTAAGTGCGACCCGCTCGCTCTCTaGGGTCATCATCTCATCATC +
Preference number: 4 (lower is better)
Translates to: GKTTTVSHATPIDLICKCDPLAL*GHHLII
Trigger: GATGATGAGATGATGACCCCAGAGAGCGAGCGGGTC...GCACTTACAAATAAGGTCTATGGGAGTAGCATGGGAAACAGTGGTTGTTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp CAAAACAAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTAGTTTCCCTTCGTACATaGATTCAAGCAGGAGAGCGA +
Preference number: 4 (lower is better)
Translates to: QNKTVWSTGKALKTMQCVVSLRT*IQAGER
Trigger: TCGCTCTCCTGCTTGAATTCATGTACGAAGGGAAAC...TACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTTGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp GTGCAAAAACAAGTTAAGATCCCAACTTTTCAGTTCCAGGAAACAAGACTGCTTGTGGCTGCTGCCGTCTaGGAGGCTCTCGACTTTATC +
Preference number: 4 (lower is better)
Translates to: VQKQVKIPTFQFQETRLLVAAAV*EALDFI
Trigger: GATAAAGTCGAGAGCCTCTCAGACGGCAGCAGCCAC...AAGCAGTCTTGTTTCCTGGAACTGAAAAGTTGGGATCTTAACTTGTTTTTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp GTTCTGTGCAATTACAAGTGTGGTATGAATGCACACTGCACATGCAATTCTTTAGTGGCTGCTGCCGTCTaGGAGGCTCTCGACTTTATC +
Preference number: 4 (lower is better)
Translates to: VLCNYKCGMNAHCTCNSLVAAAV*EALDFI
Trigger: GATAAAGTCGAGAGCCTCTCAGACGGCAGCAGCCAC...TAAAGAATTGCATGTGCAGTGTGCATTCATACCACACTTGTAATTGCACAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp GTGAAAGCGTTTGTGACAGAACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGGTGGCTGCTGCCGTCTaGGAGGCTCTCGACTTTATC +
Preference number: 4 (lower is better)
Translates to: VKAFVTEPFVEKVLLANLVAAAV*EALDFI
Trigger: GATAAAGTCGAGAGCCTCTCAGACGGCAGCAGCCAC...CAAGTTAGCCAATAAAACCTTCTCAACAAATGGTTCTGTCACAAACGCTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp GTGCAAAAACAAGTTAAGATCCCAACTTTTCAGTTCCAGGAAACAAGACTGCTTTCCTCTCGTGGCGCTTaGGGGTGTACATGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: VQKQVKIPTFQFQETRLLSSRGA*GCTCRR
Trigger: TCTCCTGCATGTACACCCTCAAGCGCCACGAGAGGA...AAGCAGTCTTGTTTCCTGGAACTGAAAAGTTGGGATCTTAACTTGTTTTTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp GTGAAAGCGTTTGTGACAGAACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGTCCTCTCGTGGCGCTTaGGGGTGTACATGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: VKAFVTEPFVEKVLLANLSSRGA*GCTCRR
Trigger: TCTCCTGCATGTACACCCTCAAGCGCCACGAGAGGA...CAAGTTAGCCAATAAAACCTTCTCAACAAATGGTTCTGTCACAAACGCTTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp CAAAACAAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTAACTGCAGCAAATGTCTaGTGTGGTCTGGAAACTCCA +
Preference number: 4 (lower is better)
Translates to: QNKTVWSTGKALKTMQCVTAANV*CGLETP
Trigger: TGGAGTTTCCAGACCACAGCAGACATTTGCTGCAGT...TACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTTGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp AACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGGCCTAACCCTCAAAAGAAACAGAACAGCTCGGTGTaGCCGGAACTGGGCATCTCC +
Preference number: 4 (lower is better)
Translates to: NHLLRRFYWLTWPNPQKKQNSSV*PELGIS
Trigger: GGAGATGCCCAGTTCCGGGCACACCGAGCTGTTCTG...TTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATAAAACCTTCTCAACAAATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp ACCTTCACAGAGACAGTCCCAGTGACCCAGTGTACTGTCAGATTTCTCTCACTGCTGCCAAGTCCCTTTTaGTGGGTAGAATGTTCAATT +
Preference number: 4 (lower is better)
Translates to: TFTETVPVTQCTVRFLSLLPSPF*WVECSI
Trigger: AATTGAACATTCTACCCAGCAAAAGGGACTTGGCAG...CAGTGAGAGAAATCTGACAGTACACTGGGTCACTGGGACTGTCTCTGTGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp TATTGGCTAACTTGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTCACACAGTCAACATCTaGCGAATCCCTCACGGAGGT +
Preference number: 4 (lower is better)
Translates to: YWLTWPNPQKKDSSLLVTHTVNI*RIPHGG
Trigger: ACCTCCGTGAGGGATTCGGCAGATGTTGACTGTGTG...AGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp AAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTACAAAAGACTCACAGTGGAACTTaGGGATGTGTCTGTACAGGT +
Preference number: 4 (lower is better)
Translates to: KTVWSTGKALKTMQCVQKTHSGT*GCVCTG
Trigger: ACCTGTACAGACACATCCGCAAGTTCCACTGTGAGT...CTTTTGTACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp ACTGCTGAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCACAAAGAAAGCCCTaGTGCCTCTGCTCGCTCAGA +
Preference number: 4 (lower is better)
Translates to: TAEAAISFFISSKPSQRQSQRKP*CLCSLR
Trigger: TCTGAGCGAGCAGAGGCACCAGGGCTTTCTTTGTGA...CTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTCAGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp AACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGGCCTAACCCTCAAAAGAAACGGTGTGCCCGGAACTaGGCATCTCCCACCAGAACA +
Preference number: 4 (lower is better)
Translates to: NHLLRRFYWLTWPNPQKKRCARN*ASPTRT
Trigger: TGTTCTGGTGGGAGATGCCCAGTTCCGGGCACACCG...TTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATAAAACCTTCTCAACAAATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp GAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGACATGTGGAGATAACTaGCAGCTGCTAGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: EAAISFFISSKPSQRQSQTCGDN*QLLARP
Trigger: AGGACGTGCTAGCAGCTGCCAGTTATCTCCACATGT...CTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp GTTCTGTGCAATTACAAGTGTGGTATGAATGCACACTGCACATGCAATTCTTTATTTTTCCAGCTGCTGTaGCGTGTGGCTCGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: VLCNYKCGMNAHCTCNSLFFQLL*RVARPL
Trigger: GAGAGGCCGAGCCACACGCCACAGCAGCTGGAAAAA...TAAAGAATTGCATGTGCAGTGTGCATTCATACCACACTTGTAATTGCACAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp GTGAAAGCGTTTGTGACAGAACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGTTTTTCCAGCTGCTGTaGCGTGTGGCTCGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: VKAFVTEPFVEKVLLANLFFQLL*RVARPL
Trigger: GAGAGGCCGAGCCACACGCCACAGCAGCTGGAAAAA...CAAGTTAGCCAATAAAACCTTCTCAACAAATGGTTCTGTCACAAACGCTTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp GTGAAAGCGTTTGTGACAGAACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGAAGTGCGTGCTCAGGTaGATCTGCAGGATGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VKAFVTEPFVEKVLLANLKCVLR*ICRMWG
Trigger: CCCCCACATCCTGCAGATCCACCTGAGCACGCACTT...CAAGTTAGCCAATAAAACCTTCTCAACAAATGGTTCTGTCACAAACGCTTTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp GGAAAAACAACCACTGTTTCCCATGCTACTCCCATAGACCTTATTTGTAAGTGCGAAATACATGCTGCATaGAGCCAGAACAGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: GKTTTVSHATPIDLICKCEIHAA*SQNSSV
Trigger: CACCGAGCTGTTCTGGCTTCATGCAGCATGTATTTC...GCACTTACAAATAAGGTCTATGGGAGTAGCATGGGAAACAGTGGTTGTTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp CTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGTGACGTTTCCCTTCGTACATaGATTCAAGCAGGAGAGCGA +
Preference number: 4 (lower is better)
Translates to: LQYPFSSQANLHRDSPSDVSLRT*IQAGER
Trigger: TCGCTCTCCTGCTTGAATTCATGTACGAAGGGAAAC...GTCACTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp AACTTTTCAGTTCCAGGAAACAAGACTGCTTTTAGACCGTACCACAACTATATAGGACAAAGACTCTGTTaGGCTGCAGGGGCTGGCTAC +
Preference number: 4 (lower is better)
Translates to: NFSVPGNKTAFRPYHNYIGQRLC*AAGAGY
Trigger: GTAGCCAGCCCCTGCAGCTCAACAGAGTCTTTGTCC...TATATAGTTGTGGTACGGTCTAAAAGCAGTCTTGTTTCCTGGAACTGAAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp CAAAACAAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTATCTCAGCACGTCCTGTaGAGAGAAATAAGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: QNKTVWSTGKALKTMQCVSQHVL*REIRAV
Trigger: AACAGCTCTTATTTCTCTTCACAGGACGTGCTGAGA...TACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTTGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp AACTTTTCAGTTCCAGGAAACAAGACTGCTTTTAGACCGTACCACAACTATATACTAAGGTCCAGTCTCTaGCAGTGGGCAAGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: NFSVPGNKTAFRPYHNYILRSSL*QWASSA
Trigger: CGCTGAGCTTGCCCACTGTCAGAGACTGGACCTTAG...TATATAGTTGTGGTACGGTCTAAAAGCAGTCTTGTTTCCTGGAACTGAAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp GAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGACTGCAGCAAATGTCTaGTGTGGTCTGGAAACTCCA +
Preference number: 4 (lower is better)
Translates to: EAAISFFISSKPSQRQSQTAANV*CGLETP
Trigger: TGGAGTTTCCAGACCACAGCAGACATTTGCTGCAGT...CTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp GTGCAAAAACAAGTTAAGATCCCAACTTTTCAGTTCCAGGAAACAAGACTGCTTCAAAGAAAGCCCTGGTaGCTCTGCTCGCTCAGACAC +
Preference number: 4 (lower is better)
Translates to: VQKQVKIPTFQFQETRLLQRKPW*LCSLRH
Trigger: GTGTCTGAGCGAGCAGAGGCACCAGGGCTTTCTTTG...AAGCAGTCTTGTTTCCTGGAACTGAAAAGTTGGGATCTTAACTTGTTTTTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp ACTGCTGAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGCTCCCACCAGAACAGTaGAGTCACAAAGAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: TAEAAISFFISSKPSQRQLPPEQ*SHKESP
Trigger: AGGGCTTTCTTTGTGACTGCACTGTTCTGGTGGGAG...CTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTCAGCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp GTTCTGTGCAATTACAAGTGTGGTATGAATGCACACTGCACATGCAATTCTTTATACTGTTTTTCCAGCTaGTGTGGCGTGTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: VLCNYKCGMNAHCTCNSLYCFSS*CGVWLG
Trigger: GCCGAGCCACACGCCACAGCAGCTGGAAAAACAGTA...TAAAGAATTGCATGTGCAGTGTGCATTCATACCACACTTGTAATTGCACAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp TATTGGCTAACTTGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTAAGACTCTGTTGAGCTaGAGGGGCTGGCTACTGTTT +
Preference number: 4 (lower is better)
Translates to: YWLTWPNPQKKDSSLLVTKTLLS*RGWLLF
Trigger: AAACAGTAGCCAGCCCCTGCAGCTCAACAGAGTCTT...AGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp AACTTTTCAGTTCCAGGAAACAAGACTGCTTTTAGACCGTACCACAACTATATATCCTGCTCTCGGAAGTaGGTGCTCAGGTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: NFSVPGNKTAFRPYHNYISCSRK*VLRWIC
Trigger: GCAGATCCACCTGAGCACGCACTTCCGAGAGCAGGA...TATATAGTTGTGGTACGGTCTAAAAGCAGTCTTGTTTCCTGGAACTGAAAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp TATTGGCTAACTTGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTACATGTGGAGATAACTaGCAGCTGCTAGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: YWLTWPNPQKKDSSLLVTTCGDN*QLLARP
Trigger: AGGACGTGCTAGCAGCTGCCAGTTATCTCCACATGT...AGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp ACTGCTGAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGCTTCATCTTCATCACTaGGCAGGTCACCTGCCATGT +
Preference number: 4 (lower is better)
Translates to: TAEAAISFFISSKPSQRQLHLHH*AGHLPC
Trigger: ACATGGCAGGTGACCTGCCCAGTGATGAAGATGAAG...CTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTCAGCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp ACTGCTGAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGGAGGTGACAGACCTCTaGGACAAAGACTCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: TAEAAISFFISSKPSQRQEVTDL*DKDSVE
Trigger: CTCAACAGAGTCTTTGTCCCAGAGGTCTGTCACCTC...CTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTCAGCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp AACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGGCCTAACCCTCAAAAGAAACTCAGAGGAGCCAGGTaGGCTGGCTCATACTGTACC +
Preference number: 4 (lower is better)
Translates to: NHLLRRFYWLTWPNPQKKLRGAR*AGSYCT
Trigger: GGTACAGTATGAGCCAGCCCACCTGGCTCCTCTGAG...TTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATAAAACCTTCTCAACAAATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp TATTGGCTAACTTGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTTCATCTCATCATCGCTaGCTTTGTCCTCCCGATCCA +
Preference number: 4 (lower is better)
Translates to: YWLTWPNPQKKDSSLLVTSSHHR*LCPPDP
Trigger: TGGATCGGGAGGACAAAGCCAGCGATGATGAGATGA...AGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp ACTGCTGAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGAGGTTGTGCGAGTACTaGAAACTCTTGCCGCATTGG +
Preference number: 4 (lower is better)
Translates to: TAEAAISFFISSKPSQRQRLCEY*KLLPHW
Trigger: CCAATGCGGCAAGAGTTTCCAGTACTCGCACAACCT...CTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTCAGCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp AAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTACAAAAGATGTCTGCTGTGGTCTaGAAACTCCATACTGTCTTC +
Preference number: 4 (lower is better)
Translates to: KTVWSTGKALKTMQCVQKMSAVV*KLHTVF
Trigger: GAAGACAGTATGGAGTTTCCAGACCACAGCAGACAT...CTTTTGTACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094276.5
ENSMUST00000193480.2
CDS-3UTR TCA 90 bp AACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGGCCTAACCCTCAAAAGAAAAATCCCTCACGGAGGTaGCAGACCTCTGGGACAAAG +
Preference number: 4 (lower is better)
Translates to: NHLLRRFYWLTWPNPQKKNPSRR*QTSGTK
Trigger: CTTTGTCCCAGAGGTCTGTCACCTCCGTGAGGGATT...TTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATAAAACCTTCTCAACAAATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp CTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGTGACTCTCAGCACGTCCTGTaGAGAGAAATAAGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: LQYPFSSQANLHRDSPSDSQHVL*REIRAV
Trigger: AACAGCTCTTATTTCTCTTCACAGGACGTGCTGAGA...GTCACTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp TATTGGCTAACTTGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTACTGCAGCAAATGTCTaGTGTGGTCTGGAAACTCCA +
Preference number: 4 (lower is better)
Translates to: YWLTWPNPQKKDSSLLVTTAANV*CGLETP
Trigger: TGGAGTTTCCAGACCACAGCAGACATTTGCTGCAGT...AGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp CAAAACAAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTACTGCCAAGTCCCTTTTaGTGGGTAGAATGTTCAATT +
Preference number: 4 (lower is better)
Translates to: QNKTVWSTGKALKTMQCVLPSPF*WVECSI
Trigger: AATTGAACATTCTACCCAGCAAAAGGGACTTGGCAG...TACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTTGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp GTGCAAAAACAAGTTAAGATCCCAACTTTTCAGTTCCAGGAAACAAGACTGCTTTCACAAAGAAAGCCCTaGTGCCTCTGCTCGCTCAGA +
Preference number: 4 (lower is better)
Translates to: VQKQVKIPTFQFQETRLLSQRKP*CLCSLR
Trigger: TCTGAGCGAGCAGAGGCACCAGGGCTTTCTTTGTGA...AAGCAGTCTTGTTTCCTGGAACTGAAAAGTTGGGATCTTAACTTGTTTTTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp GTTCTGTGCAATTACAAGTGTGGTATGAATGCACACTGCACATGCAATTCTTTATCACAAAGAAAGCCCTaGTGCCTCTGCTCGCTCAGA +
Preference number: 4 (lower is better)
Translates to: VLCNYKCGMNAHCTCNSLSQRKP*CLCSLR
Trigger: TCTGAGCGAGCAGAGGCACCAGGGCTTTCTTTGTGA...TAAAGAATTGCATGTGCAGTGTGCATTCATACCACACTTGTAATTGCACAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp CTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGTGACGGCAAGTCTTTGAACTaGAGTTTCCCTTCGTACATG +
Preference number: 4 (lower is better)
Translates to: LQYPFSSQANLHRDSPSDGKSLN*SFPSYM
Trigger: CATGTACGAAGGGAAACTCCAGTTCAAAGACTTGCC...GTCACTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp AACCTTCACAGAGACAGTCCCAGTGACCCAGTGTACTGTCAGATTTCTCTCACTCCAAGTCCCTTTTGCTaGGTAGAATGTTCAATTTGT +
Preference number: 4 (lower is better)
Translates to: NLHRDSPSDPVYCQISLTPSPFC*VECSIC
Trigger: ACAAATTGAACATTCTACCCAGCAAAAGGGACTTGG...AGTGAGAGAAATCTGACAGTACACTGGGTCACTGGGACTGTCTCTGTGAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp AACTTTTCAGTTCCAGGAAACAAGACTGCTTTTAGACCGTACCACAACTATATAAGGAGCCAGGTGGGCTaGCTCATACTGTACCCTGTT +
Preference number: 4 (lower is better)
Translates to: NFSVPGNKTAFRPYHNYIRSQVG*LILYPV
Trigger: AACAGGGTACAGTATGAGCCAGCCCACCTGGCTCCT...TATATAGTTGTGGTACGGTCTAAAAGCAGTCTTGTTTCCTGGAACTGAAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp AACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGGCCTAACCCTCAAAAGAAAGCAGGATGTGGGGGCTaGGGAAGACTTTGTTGCACA +
Preference number: 4 (lower is better)
Translates to: NHLLRRFYWLTWPNPQKKAGCGG*GRLCCT
Trigger: TGTGCAACAAAGTCTTCCCCAGCCCCCACATCCTGC...TTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATAAAACCTTCTCAACAAATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp GTGAAAGCGTTTGTGACAGAACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGGAAATACATGCTGCATaGAGCCAGAACAGCTCGGTG +
Preference number: 4 (lower is better)
Translates to: VKAFVTEPFVEKVLLANLEIHAA*SQNSSV
Trigger: CACCGAGCTGTTCTGGCTTCATGCAGCATGTATTTC...CAAGTTAGCCAATAAAACCTTCTCAACAAATGGTTCTGTCACAAACGCTTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp GTGAAAGCGTTTGTGACAGAACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGTCAGCGCTTCACTTTTaGCCGACAAGGAGTTCACCA +
Preference number: 4 (lower is better)
Translates to: VKAFVTEPFVEKVLLANLSALHF*PTRSSP
Trigger: TGGTGAACTCCTTGTCGGTCAAAAGTGAAGCGCTGA...CAAGTTAGCCAATAAAACCTTCTCAACAAATGGTTCTGTCACAAACGCTTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp CTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGTGACCTGCCAAGTCCCTTTTaGTGGGTAGAATGTTCAATT +
Preference number: 4 (lower is better)
Translates to: LQYPFSSQANLHRDSPSDLPSPF*WVECSI
Trigger: AATTGAACATTCTACCCAGCAAAAGGGACTTGGCAG...GTCACTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp GTTCTGTGCAATTACAAGTGTGGTATGAATGCACACTGCACATGCAATTCTTTAAAGACTCTGTTGAGCTaGAGGGGCTGGCTACTGTTT +
Preference number: 4 (lower is better)
Translates to: VLCNYKCGMNAHCTCNSLKTLLS*RGWLLF
Trigger: AAACAGTAGCCAGCCCCTGCAGCTCAACAGAGTCTT...TAAAGAATTGCATGTGCAGTGTGCATTCATACCACACTTGTAATTGCACAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp AACTTTTCAGTTCCAGGAAACAAGACTGCTTTTAGACCGTACCACAACTATATACATGAAGATCTGGCCTaGGGGGCTCAGGATATTGGA +
Preference number: 4 (lower is better)
Translates to: NFSVPGNKTAFRPYHNYIHEDLA*GAQDIG
Trigger: TCCAATATCCTGAGCCCCGCAGGCCAGATCTTCATG...TATATAGTTGTGGTACGGTCTAAAAGCAGTCTTGTTTCCTGGAACTGAAAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp GTTCTGTGCAATTACAAGTGTGGTATGAATGCACACTGCACATGCAATTCTTTAACATGTGGAGATAACTaGCAGCTGCTAGCACGTCCT +
Preference number: 4 (lower is better)
Translates to: VLCNYKCGMNAHCTCNSLTCGDN*QLLARP
Trigger: AGGACGTGCTAGCAGCTGCCAGTTATCTCCACATGT...TAAAGAATTGCATGTGCAGTGTGCATTCATACCACACTTGTAATTGCACAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp GTTCTGTGCAATTACAAGTGTGGTATGAATGCACACTGCACATGCAATTCTTTAAGGTTGTGCGAGTACTaGAAACTCTTGCCGCATTGG +
Preference number: 4 (lower is better)
Translates to: VLCNYKCGMNAHCTCNSLRLCEY*KLLPHW
Trigger: CCAATGCGGCAAGAGTTTCCAGTACTCGCACAACCT...TAAAGAATTGCATGTGCAGTGTGCATTCATACCACACTTGTAATTGCACAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp GGAAAAACAACCACTGTTTCCCATGCTACTCCCATAGACCTTATTTGTAAGTGCATGTCTGCTGTGGTCTaGAAACTCCATACTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GKTTTVSHATPIDLICKCMSAVV*KLHTVF
Trigger: GAAGACAGTATGGAGTTTCCAGACCACAGCAGACAT...GCACTTACAAATAAGGTCTATGGGAGTAGCATGGGAAACAGTGGTTGTTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094276.5
ENSMUST00000193480.2
CDS-3UTR TCA 90 bp AACTTTTCAGTTCCAGGAAACAAGACTGCTTTTAGACCGTACCACAACTATATATCAGCGCTTCACTTTTaGCCGACAAGGAGTTCACCA +
Preference number: 4 (lower is better)
Translates to: NFSVPGNKTAFRPYHNYISALHF*PTRSSP
Trigger: TGGTGAACTCCTTGTCGGTCAAAAGTGAAGCGCTGA...TATATAGTTGTGGTACGGTCTAAAAGCAGTCTTGTTTCCTGGAACTGAAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp GTGAAAGCGTTTGTGACAGAACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGACTGCAGCAAATGTCTaGTGTGGTCTGGAAACTCCA +
Preference number: 4 (lower is better)
Translates to: VKAFVTEPFVEKVLLANLTAANV*CGLETP
Trigger: TGGAGTTTCCAGACCACAGCAGACATTTGCTGCAGT...CAAGTTAGCCAATAAAACCTTCTCAACAAATGGTTCTGTCACAAACGCTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp AACTTTTCAGTTCCAGGAAACAAGACTGCTTTTAGACCGTACCACAACTATATACTCCCACCAGAACAGTaGAGTCACAAAGAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: NFSVPGNKTAFRPYHNYILPPEQ*SHKESP
Trigger: AGGGCTTTCTTTGTGACTGCACTGTTCTGGTGGGAG...TATATAGTTGTGGTACGGTCTAAAAGCAGTCTTGTTTCCTGGAACTGAAAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp TGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTTGCTCTAGTTTCCACTCTCTTTCACAGTaGTATGTTCCATGTCATAGT +
Preference number: 4 (lower is better)
Translates to: WPNPQKKDSSLLVTCSSFHSLSQ*YVPCHS
Trigger: ACTATGACATGGAACATAGCACTGTGAAAGAGAGTG...GAAACTAGAGCAAGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp AACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGGCCTAACCCTCAAAAGAAAAGGTTGTGCGAGTACTaGAAACTCTTGCCGCATTGG +
Preference number: 4 (lower is better)
Translates to: NHLLRRFYWLTWPNPQKKRLCEY*KLLPHW
Trigger: CCAATGCGGCAAGAGTTTCCAGTACTCGCACAACCT...TTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATAAAACCTTCTCAACAAATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp GTTCTGTGCAATTACAAGTGTGGTATGAATGCACACTGCACATGCAATTCTTTATCTCAGCACGTCCTGTaGAGAGAAATAAGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: VLCNYKCGMNAHCTCNSLSQHVL*REIRAV
Trigger: AACAGCTCTTATTTCTCTTCACAGGACGTGCTGAGA...TAAAGAATTGCATGTGCAGTGTGCATTCATACCACACTTGTAATTGCACAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp AACTTTTCAGTTCCAGGAAACAAGACTGCTTTTAGACCGTACCACAACTATATAACTCACAGTGGAACTTaGGGATGTGTCTGTACAGGT +
Preference number: 4 (lower is better)
Translates to: NFSVPGNKTAFRPYHNYITHSGT*GCVCTG
Trigger: ACCTGTACAGACACATCCGCAAGTTCCACTGTGAGT...TATATAGTTGTGGTACGGTCTAAAAGCAGTCTTGTTTCCTGGAACTGAAAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp GTGCAAAAACAAGTTAAGATCCCAACTTTTCAGTTCCAGGAAACAAGACTGCTTGGCAAGTCTTTGAACTaGAGTTTCCCTTCGTACATG +
Preference number: 4 (lower is better)
Translates to: VQKQVKIPTFQFQETRLLGKSLN*SFPSYM
Trigger: CATGTACGAAGGGAAACTCCAGTTCAAAGACTTGCC...AAGCAGTCTTGTTTCCTGGAACTGAAAAGTTGGGATCTTAACTTGTTTTTGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp GTTCTGTGCAATTACAAGTGTGGTATGAATGCACACTGCACATGCAATTCTTTAGGCAAGTCTTTGAACTaGAGTTTCCCTTCGTACATG +
Preference number: 4 (lower is better)
Translates to: VLCNYKCGMNAHCTCNSLGKSLN*SFPSYM
Trigger: CATGTACGAAGGGAAACTCCAGTTCAAAGACTTGCC...TAAAGAATTGCATGTGCAGTGTGCATTCATACCACACTTGTAATTGCACAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp GTTCTGTGCAATTACAAGTGTGGTATGAATGCACACTGCACATGCAATTCTTTAATGTCGCTGTTCAGATaGACAATGTCTCTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: VLCNYKCGMNAHCTCNSLMSLFR*TMSLLS
Trigger: GGACAAAAGAGACATTGTTCATCTGAACAGCGACAT...TAAAGAATTGCATGTGCAGTGTGCATTCATACCACACTTGTAATTGCACAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp TATTGGCTAACTTGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTTATTTCCAAAGTTCTTaGGAGCTATCTTCTAAGGTC +
Preference number: 4 (lower is better)
Translates to: YWLTWPNPQKKDSSLLVTYFQSS*ELSSKV
Trigger: GACCTTAGAAGATAGCTCTCAAGAACTTTGGAAATA...AGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR GCA 90 bp AACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGGCCTAACCCTCAAAAGAAACTGCCAAGTCCCTTTTaGTGGGTAGAATGTTCAATT +
Preference number: 4 (lower is better)
Translates to: NHLLRRFYWLTWPNPQKKLPSPF*WVECSI
Trigger: AATTGAACATTCTACCCAGCAAAAGGGACTTGGCAG...TTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATAAAACCTTCTCAACAAATGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp GTGCAAAAACAAGTTAAGATCCCAACTTTTCAGTTCCAGGAAACAAGACTGCTTTATTTCCAAAGTTCTTaGGAGCTATCTTCTAAGGTC +
Preference number: 4 (lower is better)
Translates to: VQKQVKIPTFQFQETRLLYFQSS*ELSSKV
Trigger: GACCTTAGAAGATAGCTCTCAAGAACTTTGGAAATA...AAGCAGTCTTGTTTCCTGGAACTGAAAAGTTGGGATCTTAACTTGTTTTTGCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR TCA 90 bp GTGAAAGCGTTTGTGACAGAACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGTATTTCCAAAGTTCTTaGGAGCTATCTTCTAAGGTC +
Preference number: 4 (lower is better)
Translates to: VKAFVTEPFVEKVLLANLYFQSS*ELSSKV
Trigger: GACCTTAGAAGATAGCTCTCAAGAACTTTGGAAATA...CAAGTTAGCCAATAAAACCTTCTCAACAAATGGTTCTGTCACAAACGCTTTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CCA 90 bp AACTTTTCAGTTCCAGGAAACAAGACTGCTTTTAGACCGTACCACAACTATATACCAAGTCCCTTTTGCTaGGTAGAATGTTCAATTTGT +
Preference number: 4 (lower is better)
Translates to: NFSVPGNKTAFRPYHNYIPSPFC*VECSIC
Trigger: ACAAATTGAACATTCTACCCAGCAAAAGGGACTTGG...TATATAGTTGTGGTACGGTCTAAAAGCAGTCTTGTTTCCTGGAACTGAAAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp CTTCTGCCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCTTCACCTGCACCAGGTaGCTTCTCAGCACGTCCTGT +
Preference number: 5 (lower is better)
Translates to: LLPRAGHQNHTSGCSLCCFTCTR*LLSTSC
Trigger: ACAGGACGTGCTGAGAAGCAACCTGGTGCAGGTGAA...GCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGGCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACGAGTACTGGAAACTCTaGCCGCATTGGGTGCACGTG +
Preference number: 5 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYEYWKL*PHWVHV
Trigger: CACGTGCACCCAATGCGGCAAGAGTTTCCAGTACTC...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACAACTCACAGTGGAACTaGCGGATGTGTCTGTACAGG +
Preference number: 5 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYNSQWN*RMCLYR
Trigger: CCTGTACAGACACATCCGCAAGTTCCACTGTGAGTT...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS GCA 90 bp GAACAGCTCGGTGTGCCCGGAACTGGGCATCTCCCACCAGAACAGTaGAGTCACAAAGAAAGCCCTGGTGCCTCTGCTCGCTCAGACACT +
Preference number: 5 (lower is better)
Translates to: EQLGVPGTGHLPPEQ*SHKESPGASARSDT
Trigger: AGTGTCTGAGCGAGCAGAGGCACCAGGGCTTTCTTTGTGACTGCACTGTTCTGGTGGGAGATGCCCAGTTCCGGGCACACCGAGCTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000193440.2
ENSMUST00000193480.2
ENSMUST00000195002.2
ENSMUST00000195388.2
ENSMUST00000195549.6
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp CCCCGCGCTGGCCATCAGAACCACACATCGGGCTGCAGCCTCTGCTGCCGATACGCTGCCAAGTCCCTTTaGCTGGGTAGAATGTTCAAT +
Preference number: 5 (lower is better)
Translates to: PRAGHQNHTSGCSLCCRYAAKSL*LGRMFN
Trigger: ATTGAACATTCTACCCAGCAAAAGGGACTTGGCAGC...GTATCGGCAGCAGAGGCTGCAGCCCGATGTGTGGTTCTGATGGCCAGCGCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp AACACTCGGCTGGGTACGTGTGTACACCTAAACTCTGAGCTGGCATGGGTTCTGCTGCGCTCGCACCACTaGCAGGCATGGGGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: NTRLGTCVHLNSELAWVLLRSHH*QAWGFS
Trigger: CGAGAAGCCCCATGCCTGCAAGTGGTGCGAGCGCAG...CAGAACCCATGCCAGCTCAGAGTTTAGGTGTACACACGTACCCAGCCGAGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS TCA 90 bp CGAATCCCTCACGGAGGTGACAGACCTCTGGGACAAAGACTCTGTTaGGCTGCAGGGGCTGGCTACTGTTTTTCCAGCTGCTGTGGCGTG +
Preference number: 5 (lower is better)
Translates to: RIPHGGDRPLGQRLC*AAGAGYCFSSCCGV
Trigger: CACGCCACAGCAGCTGGAAAAACAGTAGCCAGCCCCTGCAGCTCAACAGAGTCTTTGTCCCAGAGGTCTGTCACCTCCGTGAGGGATTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS TCA 90 bp ACAGGTCCAGCACACAGTCAACATCTGCCGAATCCCTCACGGAGGTaGCAGACCTCTGGGACAAAGACTCTGTTGAGCTGCAGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: TGPAHSQHLPNPSRR*QTSGTKTLLSCRGW
Trigger: CCAGCCCCTGCAGCTCAACAGAGTCTTTGTCCCAGAGGTCTGTCACCTCCGTGAGGGATTCGGCAGATGTTGACTGTGTGCTGGACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp AACACTCGGCTGGGTACGTGTGTACACCTAAACTCTGAGCTGGCATGGGTTCTGGAGCACGTGGGCACATaGACATCGGCGGCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: NTRLGTCVHLNSELAWVLEHVGT*TSAAGL
Trigger: CAAGCCTGCCGCCGATGTCAATGTGCCCACGTGCTC...CAGAACCCATGCCAGCTCAGAGTTTAGGTGTACACACGTACCCAGCCGAGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp ACCTTCACAGAGACAGTCCCAGTGACCCAGTGTACTGTCAGATTTCTCTCACTGGAGCACGTGGGCACATaGACATCGGCGGCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: TFTETVPVTQCTVRFLSLEHVGT*TSAAGL
Trigger: CAAGCCTGCCGCCGATGTCAATGTGCCCACGTGCTC...CAGTGAGAGAAATCTGACAGTACACTGGGTCACTGGGACTGTCTCTGTGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS GCA 90 bp CGCCTTCATCTTCATCACTGGGCAGGTCACCTGCCATGTGGCTGCTaGCGTCTGAGAGGCTCTCGACTTTATCCGAACAACTTGAAGCAT +
Preference number: 5 (lower is better)
Translates to: RLHLHHWAGHLPCGC*RLRGSRLYPNNLKH
Trigger: ATGCTTCAAGTTGTTCGGATAAAGTCGAGAGCCTCTCAGACGGCAGCAGCCACATGGCAGGTGACCTGCCCAGTGATGAAGATGAAGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS GCA 90 bp CTTCGCCTTCATCTTCATCACTGGGCAGGTCACCTGCCATGTGGCTaGTGCCGTCTGAGAGGCTCTCGACTTTATCCGAACAACTTGAAG +
Preference number: 5 (lower is better)
Translates to: LRLHLHHWAGHLPCG*CRLRGSRLYPNNLK
Trigger: CTTCAAGTTGTTCGGATAAAGTCGAGAGCCTCTCAGACGGCAGCAGCCACATGGCAGGTGACCTGCCCAGTGATGAAGATGAAGGCGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp AACACTCGGCTGGGTACGTGTGTACACCTAAACTCTGAGCTGGCATGGGTTCTGTTCACCTGCACCAGGTaGCTTCTCAGCACGTCCTGT +
Preference number: 5 (lower is better)
Translates to: NTRLGTCVHLNSELAWVLFTCTR*LLSTSC
Trigger: ACAGGACGTGCTGAGAAGCAACCTGGTGCAGGTGAA...CAGAACCCATGCCAGCTCAGAGTTTAGGTGTACACACGTACCCAGCCGAGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp AAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTACAAAAGCTGCGCTCGCACCACTaGCAGGCATGGGGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: KTVWSTGKALKTMQCVQKLRSHH*QAWGFS
Trigger: CGAGAAGCCCCATGCCTGCAAGTGGTGCGAGCGCAG...CTTTTGTACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS TCA 90 bp TTTGTCCAGCTGGTCCTTGTAAAAGAGGTGGAAATACATGCTGCATaGAGCCAGAACAGCTCGGTGTGCCCGGAACTGGGCATCTCCCAC +
Preference number: 5 (lower is better)
Translates to: FVQLVLVKEVEIHAA*SQNSSVCPELGISH
Trigger: GTGGGAGATGCCCAGTTCCGGGCACACCGAGCTGTTCTGGCTTCATGCAGCATGTATTTCCACCTCTTTTACAAGGACCAGCTGGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000193440.2
ENSMUST00000193480.2
ENSMUST00000195388.2
ENSMUST00000195549.6
ENSMUST00000195612.2
CDS CCA 90 bp TCATCTTCGCCTTCATCTTCATCACTGGGCAGGTCACCTGCCATGTaGCTGCTGCCGTCTGAGAGGCTCTCGACTTTATCCGAACAACTT +
Preference number: 5 (lower is better)
Translates to: SSSPSSSSLGRSPAM*LLPSERLSTLSEQL
Trigger: AAGTTGTTCGGATAAAGTCGAGAGCCTCTCAGACGGCAGCAGCCACATGGCAGGTGACCTGCCCAGTGATGAAGATGAAGGCGAAGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS CCA 90 bp ACACAGTCAACATCTGCCGAATCCCTCACGGAGGTGACAGACCTCTaGGACAAAGACTCTGTTGAGCTGCAGGGGCTGGCTACTGTTTTT +
Preference number: 5 (lower is better)
Translates to: TQSTSAESLTEVTDL*DKDSVELQGLATVF
Trigger: AAAAACAGTAGCCAGCCCCTGCAGCTCAACAGAGTCTTTGTCCCAGAGGTCTGTCACCTCCGTGAGGGATTCGGCAGATGTTGACTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp CAAAACAAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTAGAGCACGTGGGCACATaGACATCGGCGGCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: QNKTVWSTGKALKTMQCVEHVGT*TSAAGL
Trigger: CAAGCCTGCCGCCGATGTCAATGTGCCCACGTGCTC...TACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTTGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS GCA 90 bp CTCTTTTGTCCAGCTGGTCCTTGTAAAAGAGGTGGAAATACATGCTaGATGAAGCCAGAACAGCTCGGTGTGCCCGGAACTGGGCATCTC +
Preference number: 5 (lower is better)
Translates to: LFCPAGPCKRGGNTC*MKPEQLGVPGTGHL
Trigger: GAGATGCCCAGTTCCGGGCACACCGAGCTGTTCTGGCTTCATGCAGCATGTATTTCCACCTCTTTTACAAGGACCAGCTGGACAAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000193440.2
ENSMUST00000193480.2
ENSMUST00000195388.2
ENSMUST00000195549.6
ENSMUST00000195612.2
CDS CCA 90 bp TGGGTAGAATGTTCAATTTGTCATCTTCGCCTTCATCTTCATCACTaGGCAGGTCACCTGCCATGTGGCTGCTGCCGTCTGAGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: WVECSICHLRLHLHH*AGHLPCGCCRLRGS
Trigger: AGAGCCTCTCAGACGGCAGCAGCCACATGGCAGGTGACCTGCCCAGTGATGAAGATGAAGGCGAAGATGACAAATTGAACATTCTACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp AACCTTCACAGAGACAGTCCCAGTGACCCAGTGTACTGTCAGATTTCTCTCACTGGGACAAAGACTCTGTaGAGCTGCAGGGGCTGGCTA +
Preference number: 5 (lower is better)
Translates to: NLHRDSPSDPVYCQISLTGTKTL*SCRGWL
Trigger: TAGCCAGCCCCTGCAGCTCAACAGAGTCTTTGTCCC...AGTGAGAGAAATCTGACAGTACACTGGGTCACTGGGACTGTCTCTGTGAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp ACCTTCACAGAGACAGTCCCAGTGACCCAGTGTACTGTCAGATTTCTCTCACTGCTGGGGAAGACTTTGTaGCACAGGGGGCACATGAAG +
Preference number: 5 (lower is better)
Translates to: TFTETVPVTQCTVRFLSLLGKTL*HRGHMK
Trigger: CTTCATGTGCCCCCTGTGCAACAAAGTCTTCCCCAG...CAGTGAGAGAAATCTGACAGTACACTGGGTCACTGGGACTGTCTCTGTGAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp AAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTACAAAAGGGGCTGGGGAAGACTTaGTTGCACAGGGGGCACATG +
Preference number: 5 (lower is better)
Translates to: KTVWSTGKALKTMQCVQKGLGKT*LHRGHM
Trigger: CATGTGCCCCCTGTGCAACAAAGTCTTCCCCAGCCC...CTTTTGTACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp GAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGACATCGGCGGCAGGCTaGCTACGGATGCCATCCTGC +
Preference number: 5 (lower is better)
Translates to: EAAISFFISSKPSQRQSQTSAAG*LRMPSC
Trigger: GCAGGATGGCATCCGTAGCAAGCCTGCCGCCGATGT...CTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp TGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTTGCTCTAGTTTCACATCGGCGGCAGGCTaGCTACGGATGCCATCCTGC +
Preference number: 5 (lower is better)
Translates to: WPNPQKKDSSLLVTCSSFTSAAG*LRMPSC
Trigger: GCAGGATGGCATCCGTAGCAAGCCTGCCGCCGATGT...GAAACTAGAGCAAGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp TATTGGCTAACTTGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTCTGCGCTCGCACCACTaGCAGGCATGGGGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: YWLTWPNPQKKDSSLLVTLRSHH*QAWGFS
Trigger: CGAGAAGCCCCATGCCTGCAAGTGGTGCGAGCGCAG...AGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp AACACTCGGCTGGGTACGTGTGTACACCTAAACTCTGAGCTGGCATGGGTTCTGAACTCACAGTGGAACTaGCGGATGTGTCTGTACAGG +
Preference number: 5 (lower is better)
Translates to: NTRLGTCVHLNSELAWVLNSQWN*RMCLYR
Trigger: CCTGTACAGACACATCCGCAAGTTCCACTGTGAGTT...CAGAACCCATGCCAGCTCAGAGTTTAGGTGTACACACGTACCCAGCCGAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp CAAAACAAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTAGGGACAAAGACTCTGTaGAGCTGCAGGGGCTGGCTA +
Preference number: 5 (lower is better)
Translates to: QNKTVWSTGKALKTMQCVGTKTL*SCRGWL
Trigger: TAGCCAGCCCCTGCAGCTCAACAGAGTCTTTGTCCC...TACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTTGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp CTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGTGACGTCCTCTCGTGGCGCTaGAGGGTGTACATGCAGGAG +
Preference number: 5 (lower is better)
Translates to: LQYPFSSQANLHRDSPSDVLSWR*RVYMQE
Trigger: CTCCTGCATGTACACCCTCAAGCGCCACGAGAGGAC...GTCACTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp AACCTTCACAGAGACAGTCCCAGTGACCCAGTGTACTGTCAGATTTCTCTCACTGAGTACTGGAAACTCTaGCCGCATTGGGTGCACGTG +
Preference number: 5 (lower is better)
Translates to: NLHRDSPSDPVYCQISLTEYWKL*PHWVHV
Trigger: CACGTGCACCCAATGCGGCAAGAGTTTCCAGTACTC...AGTGAGAGAAATCTGACAGTACACTGGGTCACTGGGACTGTCTCTGTGAAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS GCA 90 bp TCTCATCACAGGACGCCTCTTTCTCCACCTTCACCTGCACCAGGTTaGTTCTCAGCACGTCCTGTGAAGAGAAATAAGAGCTGTTCAGAT +
Preference number: 5 (lower is better)
Translates to: SHHRTPLSPPSPAPG*FSARPVKRNKSCSD
Trigger: ATCTGAACAGCTCTTATTTCTCTTCACAGGACGTGCTGAGAAGCAACCTGGTGCAGGTGAAGGTGGAGAAAGAGGCGTCCTGTGATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp TATTGGCTAACTTGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTGTCCTCTCGTGGCGCTaGAGGGTGTACATGCAGGAG +
Preference number: 5 (lower is better)
Translates to: YWLTWPNPQKKDSSLLVTVLSWR*RVYMQE
Trigger: CTCCTGCATGTACACCCTCAAGCGCCACGAGAGGAC...AGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp GGAAAAACAACCACTGTTTCCCATGCTACTCCCATAGACCTTATTTGTAAGTGCGTCCTCTCGTGGCGCTaGAGGGTGTACATGCAGGAG +
Preference number: 5 (lower is better)
Translates to: GKTTTVSHATPIDLICKCVLSWR*RVYMQE
Trigger: CTCCTGCATGTACACCCTCAAGCGCCACGAGAGGAC...GCACTTACAAATAAGGTCTATGGGAGTAGCATGGGAAACAGTGGTTGTTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp ACTGCTGAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGGGGACAAAGACTCTGTaGAGCTGCAGGGGCTGGCTA +
Preference number: 5 (lower is better)
Translates to: TAEAAISFFISSKPSQRQGTKTL*SCRGWL
Trigger: TAGCCAGCCCCTGCAGCTCAACAGAGTCTTTGTCCC...CTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTCAGCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp AACCTTCACAGAGACAGTCCCAGTGACCCAGTGTACTGTCAGATTTCTCTCACTAACTCACAGTGGAACTaGCGGATGTGTCTGTACAGG +
Preference number: 5 (lower is better)
Translates to: NLHRDSPSDPVYCQISLTNSQWN*RMCLYR
Trigger: CCTGTACAGACACATCCGCAAGTTCCACTGTGAGTT...AGTGAGAGAAATCTGACAGTACACTGGGTCACTGGGACTGTCTCTGTGAAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS GCA 90 bp GCAATCGCATCCACATGTTCCCAGGCTCAGCTGCCAAGTCCCTTTTaGTGGGTAGAATGTTCAATTTGTCATCTTCGCCTTCATCTTCAT +
Preference number: 5 (lower is better)
Translates to: AIASTCSQAQLPSPF*WVECSICHLRLHLH
Trigger: ATGAAGATGAAGGCGAAGATGACAAATTGAACATTCTACCCAGCAAAAGGGACTTGGCAGCTGAGCCTGGGAACATGTGGATGCGATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS CCA 90 bp ATCGCATCCACATGTTCCCAGGCTCAGCTGCCAAGTCCCTTTTGCTaGGTAGAATGTTCAATTTGTCATCTTCGCCTTCATCTTCATCAC +
Preference number: 5 (lower is better)
Translates to: IASTCSQAQLPSPFC*VECSICHLRLHLHH
Trigger: GTGATGAAGATGAAGGCGAAGATGACAAATTGAACATTCTACCCAGCAAAAGGGACTTGGCAGCTGAGCCTGGGAACATGTGGATGCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp AACCTTCACAGAGACAGTCCCAGTGACCCAGTGTACTGTCAGATTTCTCTCACTTCAATGGGCAAGTCTTaGAACTGGAGTTTCCCTTCG +
Preference number: 5 (lower is better)
Translates to: NLHRDSPSDPVYCQISLTSMGKS*NWSFPS
Trigger: CGAAGGGAAACTCCAGTTCAAAGACTTGCCCATTGA...AGTGAGAGAAATCTGACAGTACACTGGGTCACTGGGACTGTCTCTGTGAAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp GTGAAAGCGTTTGTGACAGAACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGGGGCTGGGGAAGACTTaGTTGCACAGGGGGCACATG +
Preference number: 5 (lower is better)
Translates to: VKAFVTEPFVEKVLLANLGLGKT*LHRGHM
Trigger: CATGTGCCCCCTGTGCAACAAAGTCTTCCCCAGCCC...CAAGTTAGCCAATAAAACCTTCTCAACAAATGGTTCTGTCACAAACGCTTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp GTGCAAAAACAAGTTAAGATCCCAACTTTTCAGTTCCAGGAAACAAGACTGCTTGGGCTGGGGAAGACTTaGTTGCACAGGGGGCACATG +
Preference number: 5 (lower is better)
Translates to: VQKQVKIPTFQFQETRLLGLGKT*LHRGHM
Trigger: CATGTGCCCCCTGTGCAACAAAGTCTTCCCCAGCCC...AAGCAGTCTTGTTTCCTGGAACTGAAAAGTTGGGATCTTAACTTGTTTTTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp TGGCCTAACCCTCAAAAGAAAGACAGCTCTCTACTTGTGACTTGCTCTAGTTTCCTCAGCGCTTCACTTTaGACCGACAAGGAGTTCACC +
Preference number: 5 (lower is better)
Translates to: WPNPQKKDSSLLVTCSSFLSASL*TDKEFT
Trigger: GGTGAACTCCTTGTCGGTCAAAAGTGAAGCGCTGAG...GAAACTAGAGCAAGTCACAAGTAGAGAGCTGTCTTTCTTTTGAGGGTTAGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS TCA 90 bp AGAAATAAGAGCTGTTCAGATTTTCAACTCCTGAAAGGCTGGACTTaGCAGACAGGTCCAGCACACAGTCAACATCTGCCGAATCCCTCA +
Preference number: 5 (lower is better)
Translates to: RNKSCSDFQLLKGWT*QTGPAHSQHLPNPS
Trigger: TGAGGGATTCGGCAGATGTTGACTGTGTGCTGGACCTGTCTGTCAAGTCCAGCCTTTCAGGAGTTGAAAATCTGAACAGCTCTTATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp GTTCTGTGCAATTACAAGTGTGGTATGAATGCACACTGCACATGCAATTCTTTAGGGACAAAGACTCTGTaGAGCTGCAGGGGCTGGCTA +
Preference number: 5 (lower is better)
Translates to: VLCNYKCGMNAHCTCNSLGTKTL*SCRGWL
Trigger: TAGCCAGCCCCTGCAGCTCAACAGAGTCTTTGTCCC...TAAAGAATTGCATGTGCAGTGTGCATTCATACCACACTTGTAATTGCACAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp GAAGCTGCAATATCCTTTTTCATCTCAAGCAAACCTTCACAGAGACAGTCCCAGTCAATGGGCAAGTCTTaGAACTGGAGTTTCCCTTCG +
Preference number: 5 (lower is better)
Translates to: EAAISFFISSKPSQRQSQSMGKS*NWSFPS
Trigger: CGAAGGGAAACTCCAGTTCAAAGACTTGCCCATTGA...CTGGGACTGTCTCTGTGAAGGTTTGCTTGAGATGAAAAAGGATATTGCAGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp GTGCAAAAACAAGTTAAGATCCCAACTTTTCAGTTCCAGGAAACAAGACTGCTTCCTGAAAGGCTGGACTaGACAGACAGGTCCAGCACA +
Preference number: 5 (lower is better)
Translates to: VQKQVKIPTFQFQETRLLPERLD*TDRSST
Trigger: TGTGCTGGACCTGTCTGTCAAGTCCAGCCTTTCAGG...AAGCAGTCTTGTTTCCTGGAACTGAAAAGTTGGGATCTTAACTTGTTTTTGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp GTGAAAGCGTTTGTGACAGAACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGTTCACCTGCACCAGGTaGCTTCTCAGCACGTCCTGT +
Preference number: 5 (lower is better)
Translates to: VKAFVTEPFVEKVLLANLFTCTR*LLSTSC
Trigger: ACAGGACGTGCTGAGAAGCAACCTGGTGCAGGTGAA...CAAGTTAGCCAATAAAACCTTCTCAACAAATGGTTCTGTCACAAACGCTTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp CAAAACAAAACAGTGTGGAGCACAGGGAAAGCGCTCAAGACAATGCAGTGTGTATCATACTGTACCCTGTaGTTAGTGCTCACACTCTCT +
Preference number: 5 (lower is better)
Translates to: QNKTVWSTGKALKTMQCVSYCTL*LVLTLS
Trigger: AGAGAGTGTGAGCACTAACAACAGGGTACAGTATGA...TACACACTGCATTGTCTTGAGCGCTTTCCCTGTGCTCCACACTGTTTTGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp GTGAAAGCGTTTGTGACAGAACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGGAGTACTGGAAACTCTaGCCGCATTGGGTGCACGTG +
Preference number: 5 (lower is better)
Translates to: VKAFVTEPFVEKVLLANLEYWKL*PHWVHV
Trigger: CACGTGCACCCAATGCGGCAAGAGTTTCCAGTACTC...CAAGTTAGCCAATAAAACCTTCTCAACAAATGGTTCTGTCACAAACGCTTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp GGAAAAACAACCACTGTTTCCCATGCTACTCCCATAGACCTTATTTGTAAGTGCTCAATGGGCAAGTCTTaGAACTGGAGTTTCCCTTCG +
Preference number: 5 (lower is better)
Translates to: GKTTTVSHATPIDLICKCSMGKS*NWSFPS
Trigger: CGAAGGGAAACTCCAGTTCAAAGACTTGCCCATTGA...GCACTTACAAATAAGGTCTATGGGAGTAGCATGGGAAACAGTGGTTGTTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp AACTTTTCAGTTCCAGGAAACAAGACTGCTTTTAGACCGTACCACAACTATATACCTGAAAGGCTGGACTaGACAGACAGGTCCAGCACA +
Preference number: 5 (lower is better)
Translates to: NFSVPGNKTAFRPYHNYIPERLD*TDRSST
Trigger: TGTGCTGGACCTGTCTGTCAAGTCCAGCCTTTCAGG...TATATAGTTGTGGTACGGTCTAAAAGCAGTCTTGTTTCCTGGAACTGAAAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp AACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGGCCTAACCCTCAAAAGAAACTGGGGAAGACTTTGTaGCACAGGGGGCACATGAAG +
Preference number: 5 (lower is better)
Translates to: NHLLRRFYWLTWPNPQKKLGKTL*HRGHMK
Trigger: CTTCATGTGCCCCCTGTGCAACAAAGTCTTCCCCAG...TTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATAAAACCTTCTCAACAAATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp AACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGGCCTAACCCTCAAAAGAAACTCAGCGCTTCACTTTaGACCGACAAGGAGTTCACC +
Preference number: 5 (lower is better)
Translates to: NHLLRRFYWLTWPNPQKKLSASL*TDKEFT
Trigger: GGTGAACTCCTTGTCGGTCAAAAGTGAAGCGCTGAG...TTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATAAAACCTTCTCAACAAATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp AACTTTTCAGTTCCAGGAAACAAGACTGCTTTTAGACCGTACCACAACTATATACTCAGCGCTTCACTTTaGACCGACAAGGAGTTCACC +
Preference number: 5 (lower is better)
Translates to: NFSVPGNKTAFRPYHNYILSASL*TDKEFT
Trigger: GGTGAACTCCTTGTCGGTCAAAAGTGAAGCGCTGAG...TATATAGTTGTGGTACGGTCTAAAAGCAGTCTTGTTTCCTGGAACTGAAAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp GTGAAAGCGTTTGTGACAGAACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGGCTGCCAAGTCCCTTTaGCTGGGTAGAATGTTCAAT +
Preference number: 5 (lower is better)
Translates to: VKAFVTEPFVEKVLLANLAAKSL*LGRMFN
Trigger: ATTGAACATTCTACCCAGCAAAAGGGACTTGGCAGC...CAAGTTAGCCAATAAAACCTTCTCAACAAATGGTTCTGTCACAAACGCTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp GTTCTGTGCAATTACAAGTGTGGTATGAATGCACACTGCACATGCAATTCTTTATCATACTGTACCCTGTaGTTAGTGCTCACACTCTCT +
Preference number: 5 (lower is better)
Translates to: VLCNYKCGMNAHCTCNSLSYCTL*LVLTLS
Trigger: AGAGAGTGTGAGCACTAACAACAGGGTACAGTATGA...TAAAGAATTGCATGTGCAGTGTGCATTCATACCACACTTGTAATTGCACAGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS-3UTR CAA 90 bp AACCATTTGTTGAGAAGGTTTTATTGGCTAACTTGGCCTAACCCTCAAAAGAAATCATACTGTACCCTGTaGTTAGTGCTCACACTCTCT +
Preference number: 5 (lower is better)
Translates to: NHLLRRFYWLTWPNPQKKSYCTL*LVLTLS
Trigger: AGAGAGTGTGAGCACTAACAACAGGGTACAGTATGA...TTTCTTTTGAGGGTTAGGCCAAGTTAGCCAATAAAACCTTCTCAACAAATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS GCA 72 bp GGTGTGCCCGGAACTGGGCATCTCCCACCAGAACAGTaGAGTCACAAAGAAAGCCCTGGTGCCTCTGCTCGC +
Preference number: 6 (lower is better)
Translates to: GVPGTGHLPPEQ*SHKESPGASAR
Trigger: GCGAGCAGAGGCACCAGGGCTTTCTTTGTGACTGCACTGTTCTGGTGGGAGATGCCCAGTTCCGGGCACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000193440.2
ENSMUST00000193480.2
ENSMUST00000195002.2
ENSMUST00000195388.2
ENSMUST00000195549.6
ENSMUST00000195612.2
CDS CCA 72 bp ACATCTGCCGAATCCCTCACGGAGGTGACAGACCTCTaGGACAAAGACTCTGTTGAGCTGCAGGGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: TSAESLTEVTDL*DKDSVELQGLA
Trigger: AGCCAGCCCCTGCAGCTCAACAGAGTCTTTGTCCCAGAGGTCTGTCACCTCCGTGAGGGATTCGGCAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS GCA 72 bp CTTCATCACTGGGCAGGTCACCTGCCATGTGGCTGCTaGCGTCTGAGAGGCTCTCGACTTTATCCGAACAAC +
Preference number: 6 (lower is better)
Translates to: LHHWAGHLPCGC*RLRGSRLYPNN
Trigger: GTTGTTCGGATAAAGTCGAGAGCCTCTCAGACGGCAGCAGCCACATGGCAGGTGACCTGCCCAGTGATGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000193480.2
ENSMUST00000195388.2
ENSMUST00000195612.2
CDS GCA 72 bp CATCTTCATCACTGGGCAGGTCACCTGCCATGTGGCTaGTGCCGTCTGAGAGGCTCTCGACTTTATCCGAAC +
Preference number: 6 (lower is better)
Translates to: HLHHWAGHLPCG*CRLRGSRLYPN
Trigger: GTTCGGATAAAGTCGAGAGCCTCTCAGACGGCAGCAGCCACATGGCAGGTGACCTGCCCAGTGATGAAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000193480.2
ENSMUST00000195388.2
ENSMUST00000195612.2
CDS GCA 72 bp GGACTTGACAGACAGGTCCAGCACACAGTCAACATCTaGCGAATCCCTCACGGAGGTGACAGACCTCTGGGA +
Preference number: 6 (lower is better)
Translates to: GLDRQVQHTVNI*RIPHGGDRPLG
Trigger: TCCCAGAGGTCTGTCACCTCCGTGAGGGATTCGGCAGATGTTGACTGTGTGCTGGACCTGTCTGTCAAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS CCA 72 bp CCTTCATCTTCATCACTGGGCAGGTCACCTGCCATGTaGCTGCTGCCGTCTGAGAGGCTCTCGACTTTATCC +
Preference number: 6 (lower is better)
Translates to: PSSSSLGRSPAM*LLPSERLSTLS
Trigger: GGATAAAGTCGAGAGCCTCTCAGACGGCAGCAGCCACATGGCAGGTGACCTGCCCAGTGATGAAGATGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS CCA 72 bp ACCTCTGGGACAAAGACTCTGTTGAGCTGCAGGGGCTaGCTACTGTTTTTCCAGCTGCTGTGGCGTGTGGCT +
Preference number: 6 (lower is better)
Translates to: TSGTKTLLSCRG*LLFFQLLWRVA
Trigger: AGCCACACGCCACAGCAGCTGGAAAAACAGTAGCCAGCCCCTGCAGCTCAACAGAGTCTTTGTCCCAGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000195612.2
CDS CCA 72 bp TCCTCTGGGACAAAGACTCTGTTGAGCTGCAGGGGCTaGCTACTGTTTTTCCAGCTGCTGTGGCGTGTGGCT +
Preference number: 6 (lower is better)
Translates to: SSGTKTLLSCRG*LLFFQLLWRVA
Trigger: AGCCACACGCCACAGCAGCTGGAAAAACAGTAGCCAGCCCCTGCAGCTCAACAGAGTCTTTGTCCCAGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000193480.2
CDS TCA 72 bp GCACACAGTCAACATCTGCCGAATCCCTCACGGAGGTaGCAGACCTCTGGGACAAAGACTCTGTTGAGCTGC +
Preference number: 6 (lower is better)
Translates to: AHSQHLPNPSRR*QTSGTKTLLSC
Trigger: GCAGCTCAACAGAGTCTTTGTCCCAGAGGTCTGTCACCTCCGTGAGGGATTCGGCAGATGTTGACTGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS GCA 72 bp CTCTCATCACAGGACGCCTCTTTCTCCACCTTCACCTaGACCAGGTTGCTTCTCAGCACGTCCTGTGAAGAG +
Preference number: 6 (lower is better)
Translates to: LSSQDASFSTFT*TRLLLSTSCEE
Trigger: CTCTTCACAGGACGTGCTGAGAAGCAACCTGGTGCAGGTGAAGGTGGAGAAAGAGGCGTCCTGTGATGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000195612.2
CDS TCA 72 bp CTGGTCCTTGTAAAAGAGGTGGAAATACATGCTGCATaGAGCCAGAACAGCTCGGTGTGCCCGGAACTGGGC +
Preference number: 6 (lower is better)
Translates to: LVLVKEVEIHAA*SQNSSVCPELG
Trigger: GCCCAGTTCCGGGCACACCGAGCTGTTCTGGCTTCATGCAGCATGTATTTCCACCTCTTTTACAAGGACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000193440.2
ENSMUST00000193480.2
ENSMUST00000195388.2
ENSMUST00000195549.6
ENSMUST00000195612.2
CDS GCA 72 bp CCAGCTGGTCCTTGTAAAAGAGGTGGAAATACATGCTaGATGAAGCCAGAACAGCTCGGTGTGCCCGGAACT +
Preference number: 6 (lower is better)
Translates to: PAGPCKRGGNTC*MKPEQLGVPGT
Trigger: AGTTCCGGGCACACCGAGCTGTTCTGGCTTCATGCAGCATGTATTTCCACCTCTTTTACAAGGACCAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000193440.2
ENSMUST00000193480.2
ENSMUST00000195388.2
ENSMUST00000195549.6
ENSMUST00000195612.2
CDS GCA 72 bp CAAAGAAAGCCCTGGTGCCTCTGCTCGCTCAGACACTaGAGCAAATGTCTGCTGTGGTCTGGAAACTCCATA +
Preference number: 6 (lower is better)
Translates to: QRKPWCLCSLRH*SKCLLWSGNSI
Trigger: TATGGAGTTTCCAGACCACAGCAGACATTTGCTGCAGTGTCTGAGCGAGCAGAGGCACCAGGGCTTTCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094276.5
ENSMUST00000193480.2
CDS CCA 72 bp TGTTCAATTTGTCATCTTCGCCTTCATCTTCATCACTaGGCAGGTCACCTGCCATGTGGCTGCTGCCGTCTG +
Preference number: 6 (lower is better)
Translates to: CSICHLRLHLHH*AGHLPCGCCRL
Trigger: CAGACGGCAGCAGCCACATGGCAGGTGACCTGCCCAGTGATGAAGATGAAGGCGAAGATGACAAATTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS GCA 72 bp GGTGCCTCTGCTCGCTCAGACACTGCAGCAAATGTCTaGTGTGGTCTGGAAACTCCATACTGTCTTCATAAC +
Preference number: 6 (lower is better)
Translates to: GASARSDTAANV*CGLETPYCLHN
Trigger: GTTATGAAGACAGTATGGAGTTTCCAGACCACAGCAGACATTTGCTGCAGTGTCTGAGCGAGCAGAGGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094276.5
ENSMUST00000193480.2
CDS CAA 72 bp CTGGCAGCTGCTAGCACGTCCTCAATGGGCAAGTCTTaGAACTGGAGTTTCCCTTCGTACATGAATTCAAGC +
Preference number: 6 (lower is better)
Translates to: LAAASTSSMGKS*NWSFPSYMNSS
Trigger: GCTTGAATTCATGTACGAAGGGAAACTCCAGTTCAAAGACTTGCCCATTGAGGACGTGCTAGCAGCTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000193440.2
ENSMUST00000193480.2
ENSMUST00000195388.2
ENSMUST00000195549.6
ENSMUST00000195612.2
CDS CAA 90 bp GGCAATCGCATCCACATGTTCCCAGGCTCAGCTGCCAAGTCCCTTTaGCTGGGTAGAATGTTCAATTTGTCATCTTCGCCTTCATCTTCA +
Preference number: 6 (lower is better)
Translates to: GNRIHMFPGSAAKSL*LGRMFNLSSSPSSS
Trigger: TGAAGATGAAGGCGAAGATGACAAATTGAACATTCTACCCAGCAAAAGGGACTTGGCAGCTGAGCCTGGGAACATGTGGATGCGATTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS GCA 72 bp TCCACATGTTCCCAGGCTCAGCTGCCAAGTCCCTTTTaGTGGGTAGAATGTTCAATTTGTCATCTTCGCCTT +
Preference number: 6 (lower is better)
Translates to: STCSQAQLPSPF*WVECSICHLRL
Trigger: AAGGCGAAGATGACAAATTGAACATTCTACCCAGCAAAAGGGACTTGGCAGCTGAGCCTGGGAACATGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS CCA 72 bp GCTGCTAGCACGTCCTCAATGGGCAAGTCTTTGAACTaGAGTTTCCCTTCGTACATGAATTCAAGCAGGAGA +
Preference number: 6 (lower is better)
Translates to: AASTSSMGKSLN*SFPSYMNSSRR
Trigger: TCTCCTGCTTGAATTCATGTACGAAGGGAAACTCCAGTTCAAAGACTTGCCCATTGAGGACGTGCTAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000193440.2
ENSMUST00000193480.2
ENSMUST00000195388.2
ENSMUST00000195549.6
ENSMUST00000195612.2
CDS CAA 72 bp ATCCACATGTTCCCAGGCTCAGCTGCCAAGTCCCTTTaGCTGGGTAGAATGTTCAATTTGTCATCTTCGCCT +
Preference number: 6 (lower is better)
Translates to: IHMFPGSAAKSL*LGRMFNLSSSP
Trigger: AGGCGAAGATGACAAATTGAACATTCTACCCAGCAAAAGGGACTTGGCAGCTGAGCCTGGGAACATGTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS CCA 72 bp ACATGTTCCCAGGCTCAGCTGCCAAGTCCCTTTTGCTaGGTAGAATGTTCAATTTGTCATCTTCGCCTTCAT +
Preference number: 6 (lower is better)
Translates to: TCSQAQLPSPFC*VECSICHLRLH
Trigger: ATGAAGGCGAAGATGACAAATTGAACATTCTACCCAGCAAAAGGGACTTGGCAGCTGAGCCTGGGAACATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000193480.2
ENSMUST00000195612.2
CDS CAA 90 bp AGGCTCTCGACTTTATCCGAACAACTTGAAGCATCTTCTTCTTTTTaGGTGCTGTCCGCCTCTGTGGTAGCTTTCTCTTTCAGCTTCTTT +
Preference number: 6 (lower is better)
Translates to: RLSTLSEQLEASSSF*VLSASVVAFSFSFF
Trigger: AAAGAAGCTGAAAGAGAAAGCTACCACAGAGGCGGACAGCACCAAAAAAGAAGAAGATGCTTCAAGTTGTTCGGATAAAGTCGAGAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000077225.8
ENSMUST00000094276.5
ENSMUST00000192851.2
ENSMUST00000193480.2
ENSMUST00000195388.2
ENSMUST00000195612.2