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Pregenerated sensors for ZBTB16 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000066687

Ensembl transcript IDs: ENSMUST00000093852.5, ENSMUST00000216150.2

Found 285 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCAGCTCAGCCCTCTCCAGCTTTTATGGTTGGGCGGGGGTCTGTGTaGGGCAGGCTGAGTGGGAAGGGTTGGGAGGCAAGGGACCAGCCA +
Preference number: 1 (lower is better)
Translates to: SAQPSPAFMVGRGSV*GRLSGKGWEARDQP
Trigger: TGGCTGGTCCCTTGCCTCCCAACCCTTCCCACTCAGCCTGCCCCACACAGACCCCCGCCCAACCATAAAAGCTGGAGAGGGCTGAGCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR CCA 90 bp AGAGCCACTGGACTCTCAGAGACAGTGAGGGGCACCAGCTGTAGCTaGGCAGAGCAGAAAGCCTCTCCCGCCATGACGCCAGAGCTGCCA +
Preference number: 1 (lower is better)
Translates to: RATGLSETVRGTSCS*AEQKASPAMTPELP
Trigger: TGGCAGCTCTGGCGTCATGGCGGGAGAGGCTTTCTGCTCTGCCCAGCTACAGCTGGTGCCCCTCACTGTCTCTGAGAGTCCAGTGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR CCA 90 bp TCCCACCACCTTCTCAGCCCTCCTGGCCTCCACTCAGATCCTGAATaGTCCACTTTTTCCTACAGCTTCCAGCCAGAGAAGGGGAGGGCC +
Preference number: 1 (lower is better)
Translates to: SHHLLSPPGLHSDPE*STFSYSFQPEKGRA
Trigger: GGCCCTCCCCTTCTCTGGCTGGAAGCTGTAGGAAAAAGTGGACCATTCAGGATCTGAGTGGAGGCCAGGAGGGCTGAGAAGGTGGTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR CCA 90 bp AGGCTGAGTGGGAAGGGTTGGGAGGCAAGGGACCAGCCAGTTCTATaGAGGAGTCGAAAGGTTTTCTCTTTGTCACCGATCTTGAATGAC +
Preference number: 1 (lower is better)
Translates to: RLSGKGWEARDQPVL*RSRKVFSLSPILND
Trigger: GTCATTCAAGATCGGTGACAAAGAGAAAACCTTTCGACTCCTCCATAGAACTGGCTGGTCCCTTGCCTCCCAACCCTTCCCACTCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR CCA 90 bp CAACAGGTCTCTTACACATACATAAAGCACGAAATGAAGTGGGTGTaGGTCCGTCCCAAAGCAAAGGAGATTATTACAAATGTGCTTCCC +
Preference number: 1 (lower is better)
Translates to: QQVSYTYIKHEMKWV*VRPKAKEIITNVLP
Trigger: GGGAAGCACATTTGTAATAATCTCCTTTGCTTTGGGACGGACCCACACCCACTTCATTTCGTGCTTTATGTATGTGTAAGAGACCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR CCA 90 bp AAAAGACAACAGGTCTCTTACACATACATAAAGCACGAAATGAAGTaGGTGTGGGTCCGTCCCAAAGCAAAGGAGATTATTACAAATGTG +
Preference number: 1 (lower is better)
Translates to: KRQQVSYTYIKHEMK*VWVRPKAKEIITNV
Trigger: CACATTTGTAATAATCTCCTTTGCTTTGGGACGGACCCACACCCACTTCATTTCGTGCTTTATGTATGTGTAAGAGACCTGTTGTCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR-3UTR CCA 90 bp GCGTGGCTACAGCAGCGGCCACCCCTCGGACTTTCTGTTCCTTTTCATGGCCCTCTAGCTCGCCTTTGCTaGCTCCTGCCACTGCTCTAC +
Preference number: 2 (lower is better)
Translates to: AWLQQRPPLGLSVPFHGPLARLC*LLPLLY
Trigger: GTAGAGCAGTGGCAGGAGCCAGCAAAGGCGAGCTAG...AGGGCCATGAAAAGGAACAGAAAGTCCGAGGGGTGGCCGCTGCTGTAGCCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR-3UTR TCA 90 bp TACAGTTTGAAAAGATCAGCTCAGCCCTCTCCAGCTTTTATGGTTGGGCGGGGGCCAGAGCTGCCACTCTaGGCATCAGCTGGGGACCCC +
Preference number: 2 (lower is better)
Translates to: YSLKRSAQPSPAFMVGRGPELPL*ASAGDP
Trigger: GGGGTCCCCAGCTGATGCTCAGAGTGGCAGCTCTGG...CCCCCGCCCAACCATAAAAGCTGGAGAGGGCTGAGCTGATCTTTTCAAACTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR-3UTR GCA 90 bp CAGCTCAGCAGGACTCTTGCTCATGAGGGAGTTTGGGTGGGGTACAATGCCTGCGCCTTTGCTGGCTCCTaGCACTGCTCTACCATGTGT +
Preference number: 2 (lower is better)
Translates to: QLSRTLAHEGVWVGYNACAFAGS*HCSTMC
Trigger: ACACATGGTAGAGCAGTGGCAGGAGCCAGCAAAGGC...GCAGGCATTGTACCCCACCCAAACTCCCTCATGAGCAAGAGTCCTGCTGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR-3UTR TCA 90 bp CAGCTCAGCAGGACTCTTGCTCATGAGGGAGTTTGGGTGGGGTACAATGCCTGCCAAAAAGCTGAAGGGTaGGGAGAGCCACTGGACTCT +
Preference number: 2 (lower is better)
Translates to: QLSRTLAHEGVWVGYNACQKAEG*GEPLDS
Trigger: AGAGTCCAGTGGCTCTCCTCACCCTTCAGCTTTTTG...GCAGGCATTGTACCCCACCCAAACTCCCTCATGAGCAAGAGTCCTGCTGAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR-3UTR TCA 90 bp GCGTGGCTACAGCAGCGGCCACCCCTCGGACTTTCTGTTCCTTTTCATGGCCCTCACAGACAGCAGCCATaGAAATATACCAACTCTGGC +
Preference number: 2 (lower is better)
Translates to: AWLQQRPPLGLSVPFHGPHRQQP*KYTNSG
Trigger: GCCAGAGTTGGTATATTTTCATGGCTGCTGTCTGTG...AGGGCCATGAAAAGGAACAGAAAGTCCGAGGGGTGGCCGCTGCTGTAGCCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR-3UTR CCA 90 bp GGCAGTGGTTTGATAGCCAGATCACCTGGAGCCCCAGGAAATAATCCAAGGCCACTAGCTCGCCTTTGCTaGCTCCTGCCACTGCTCTAC +
Preference number: 2 (lower is better)
Translates to: GSGLIARSPGAPGNNPRPLARLC*LLPLLY
Trigger: GTAGAGCAGTGGCAGGAGCCAGCAAAGGCGAGCTAG...TGGCCTTGGATTATTTCCTGGGGCTCCAGGTGATCTGGCTATCAAACCACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
3UTR-3UTR CCA 90 bp CCACTCCCACCTCCACCACGTAAAGCTCACCTGAGAGGGGGCATTCACTCCCCAATGAGGGAGTTTGGGTaGGGTACAATGCCTGCTTTA +
Preference number: 2 (lower is better)
Translates to: PLPPPPRKAHLRGGIHSPMREFG*GTMPAL
Trigger: TAAAGCAGGCATTGTACCCCACCCAAACTCCCTCAT...TGGGGAGTGAATGCCCCCTCTCAGGTGAGCTTTACGTGGTGGAGGTGGGAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR-3UTR GCA 90 bp ACAGGTCTCTTACACATACATAAAGCACGAAATGAAGTGGGTGTGGGTCCGTCCGCTGGCTCCTGCCACTaGTCTACCATGTGTTGGGGG +
Preference number: 2 (lower is better)
Translates to: TGLLHIHKARNEVGVGPSAGSCH*STMCWG
Trigger: CCCCCAACACATGGTAGAGCAGTGGCAGGAGCCAGC...GGACGGACCCACACCCACTTCATTTCGTGCTTTATGTATGTGTAAGAGACCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR-3UTR GCA 90 bp CCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTCGCTGGCTCCTGCCACTaGTCTACCATGTGTTGGGGG +
Preference number: 2 (lower is better)
Translates to: PQEIIQGQVTIRLPSPSLAGSCH*STMCWG
Trigger: CCCCCAACACATGGTAGAGCAGTGGCAGGAGCCAGC...GAGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
3UTR-3UTR GCA 90 bp GCGTGGCTACAGCAGCGGCCACCCCTCGGACTTTCTGTTCCTTTTCATGGCCCTGAGAGGAGAAAAATATaGCCCTGTGTGAATGAGCAA +
Preference number: 2 (lower is better)
Translates to: AWLQQRPPLGLSVPFHGPERRKI*PCVNEQ
Trigger: TTGCTCATTCACACAGGGGCATATTTTTCTCCTCTC...AGGGCCATGAAAAGGAACAGAAAGTCCGAGGGGTGGCCGCTGCTGTAGCCACGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR-3UTR CCA 90 bp GGCCTCCACTCAGATCCTGAATGGTCCACTTTTTCCTACAGCTTCCAGCCAGAGCATTCACTCCCCATCTaGGGCAAAGGGGCCTTTCAA +
Preference number: 2 (lower is better)
Translates to: GLHSDPEWSTFSYSFQPEHSLPI*GKGAFQ
Trigger: TTGAAAGGCCCCTTTGCCCCAGATGGGGAGTGAATG...CTCTGGCTGGAAGCTGTAGGAAAAAGTGGACCATTCAGGATCTGAGTGGAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR-3UTR TCA 90 bp AATGACACCCTCCCAGTTCCTCTAATATCTCTCACAACCAAAAGGGTGGGGAAGGACTCTCAGAGACAGTaGGGGGCACCAGCTGTAGCT +
Preference number: 2 (lower is better)
Translates to: NDTLPVPLISLTTKRVGKDSQRQ*GAPAVA
Trigger: AGCTACAGCTGGTGCCCCTCACTGTCTCTGAGAGTC...CTTCCCCACCCTTTTGGTTGTGAGAGATATTAGAGGAACTGGGAGGGTGTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR-3UTR GCA 90 bp GCGTGGCTACAGCAGCGGCCACCCCTCGGACTTTCTGTTCCTTTTCATGGCCCTGTGGGGTACAATGCCTaGTTTATTTTGTTCTGTGTT +
Preference number: 2 (lower is better)
Translates to: AWLQQRPPLGLSVPFHGPVGYNA*FILFCV
Trigger: AACACAGAACAAAATAAAGCAGGCATTGTACCCCAC...AGGGCCATGAAAAGGAACAGAAAGTCCGAGGGGTGGCCGCTGCTGTAGCCACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR-3UTR GCA 90 bp GGCTACAGCAGCGGCCACCCCTCGGACTTTCTGTTCCTTTTCATGGCCCTTTGCATCTTTGTTTCCATTTaGAAGCAGAGTGCAGCTCAG +
Preference number: 2 (lower is better)
Translates to: GYSSGHPSDFLFLFMALCIFVSI*KQSAAQ
Trigger: CTGAGCTGCACTCTGCTTGCAAATGGAAACAAAGAT...GCAAAGGGCCATGAAAAGGAACAGAAAGTCCGAGGGGTGGCCGCTGCTGTAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR-3UTR GCA 90 bp GGCCTCCACTCAGATCCTGAATGGTCCACTTTTTCCTACAGCTTCCAGCCAGAGGCCATCAAAAGCAGGTaGAAAAAGCTGAAGGGTGAG +
Preference number: 2 (lower is better)
Translates to: GLHSDPEWSTFSYSFQPEAIKSR*KKLKGE
Trigger: CTCACCCTTCAGCTTTTTGCACCTGCTTTTGATGGC...CTCTGGCTGGAAGCTGTAGGAAAAAGTGGACCATTCAGGATCTGAGTGGAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR-3UTR CCA 90 bp AATGACACCCTCCCAGTTCCTCTAATATCTCTCACAACCAAAAGGGTGGGGAAGGGTGAGGAGAGCCACTaGACTCTCAGAGACAGTGAG +
Preference number: 2 (lower is better)
Translates to: NDTLPVPLISLTTKRVGKGEESH*TLRDSE
Trigger: CTCACTGTCTCTGAGAGTCCAGTGGCTCTCCTCACC...CTTCCCCACCCTTTTGGTTGTGAGAGATATTAGAGGAACTGGGAGGGTGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR-3UTR CCA 90 bp ACAGGTCTCTTACACATACATAAAGCACGAAATGAAGTGGGTGTGGGTCCGTCCGCTCATGAGGGAGTTTaGGTGGGGTACAATGCCTGC +
Preference number: 2 (lower is better)
Translates to: TGLLHIHKARNEVGVGPSAHEGV*VGYNAC
Trigger: GCAGGCATTGTACCCCACCCAAACTCCCTCATGAGC...GGACGGACCCACACCCACTTCATTTCGTGCTTTATGTATGTGTAAGAGACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR-3UTR TCA 90 bp AATGACACCCTCCCAGTTCCTCTAATATCTCTCACAACCAAAAGGGTGGGGAAGGGTGTAAGCCCCTTGTaGCCAGAGAACAGCCATCAA +
Preference number: 2 (lower is better)
Translates to: NDTLPVPLISLTTKRVGKGVSPL*PENSHQ
Trigger: TTGATGGCTGTTCTCTGGTCACAAGGGGCTTACACC...CTTCCCCACCCTTTTGGTTGTGAGAGATATTAGAGGAACTGGGAGGGTGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR-3UTR CCA 90 bp TTGGGAGGCAAGGGACCAGCCAGTTCTATGGAGGAGTCGAAAGGTTTTCTCTTTCAGCACAACAAAACCTaGCTCATCTGCCCCTCATGT +
Preference number: 2 (lower is better)
Translates to: LGGKGPASSMEESKGFLFQHNKT*LICPSC
Trigger: ACATGAGGGGCAGATGAGCCAGGTTTTGTTGTGCTG...AAAGAGAAAACCTTTCGACTCCTCCATAGAACTGGCTGGTCCCTTGCCTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR-3UTR CCA 90 bp CCACTGGGACCTTTCTCCAGAGTGTTTCCGGCTGAACTAAAGCTGGGCACTGATGGAAGGAAGAAGTTTTaGAATCTGACACAGCTTTCC +
Preference number: 2 (lower is better)
Translates to: PLGPFSRVFPAELKLGTDGRKKF*NLTQLS
Trigger: GGAAAGCTGTGTCAGATTCCAAAACTTCTTCCTTCC...ATCAGTGCCCAGCTTTAGTTCAGCCGGAAACACTCTGGAGAAAGGTCCCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR-3UTR CCA 90 bp GGCCTCCACTCAGATCCTGAATGGTCCACTTTTTCCTACAGCTTCCAGCCAGAGCGAAGTTATAGGTTGTaGAGAGGAGAAAAATATGCC +
Preference number: 2 (lower is better)
Translates to: GLHSDPEWSTFSYSFQPERSYRL*RGEKYA
Trigger: GGCATATTTTTCTCCTCTCCACAACCTATAACTTCG...CTCTGGCTGGAAGCTGTAGGAAAAAGTGGACCATTCAGGATCTGAGTGGAGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR-3UTR TCA 90 bp TACAGTTTGAAAAGATCAGCTCAGCCCTCTCCAGCTTTTATGGTTGGGCGGGGGGTCACCGATCTTGAATaGCATCTTCCTGTTAAAAAT +
Preference number: 2 (lower is better)
Translates to: YSLKRSAQPSPAFMVGRGVTDLE*HLPVKN
Trigger: ATTTTTAACAGGAAGATGTCATTCAAGATCGGTGAC...CCCCCGCCCAACCATAAAAGCTGGAGAGGGCTGAGCTGATCTTTTCAAACTGTA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR TCA 72 bp GCTGTAGCTGGGCAGAGCAGAAAGCCTCTCCCGCCATaGCGCCAGAGCTGCCACTCTGAGCATCAGCTGGGG +
Preference number: 3 (lower is better)
Translates to: AVAGQSRKPLPP*RQSCHSEHQLG
Trigger: CCCCAGCTGATGCTCAGAGTGGCAGCTCTGGCGTCATGGCGGGAGAGGCTTTCTGCTCTGCCCAGCTACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR CCA 72 bp GGACTCTCAGAGACAGTGAGGGGCACCAGCTGTAGCTaGGCAGAGCAGAAAGCCTCTCCCGCCATGACGCCA +
Preference number: 3 (lower is better)
Translates to: GLSETVRGTSCS*AEQKASPAMTP
Trigger: TGGCGTCATGGCGGGAGAGGCTTTCTGCTCTGCCCAGCTACAGCTGGTGCCCCTCACTGTCTCTGAGAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR TCA 72 bp GACAGTAACGTTCTCCAGTGGCCAATCCTCCCACTCTaGTCAGGCAGGGCATCCACTCCCACCTCCACCACG +
Preference number: 3 (lower is better)
Translates to: DSNVLQWPILPL*SGRASTPTSTT
Trigger: CGTGGTGGAGGTGGGAGTGGATGCCCTGCCTGATCAGAGTGGGAGGATTGGCCACTGGAGAACGTTACTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR-3UTR CAA 90 bp GCAAACATGACAAGAGGCCAGAAGCGCCATCAGCTCCTCCCCTCTGCTCCCTGGAGCTCAGCAGGACTCTaGCTCATGAGGGAGTTTGGG +
Preference number: 3 (lower is better)
Translates to: ANMTRGQKRHQLLPSAPWSSAGL*LMREFG
Trigger: CCCAAACTCCCTCATGAGCAAGAGTCCTGCTGAGCT...CCAGGGAGCAGAGGGGAGGAGCTGATGGCGCTTCTGGCCTCTTGTCATGTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR TCA 72 bp AGAGGAGGGGAAAGGAGGTCTAAGAGGTCATGGCTCTaGCCAGAGAGACCCTCACCTCTGCTTCCTGGTTTC +
Preference number: 3 (lower is better)
Translates to: RGGERRSKRSWL*PERPSPLLPGF
Trigger: GAAACCAGGAAGCAGAGGTGAGGGTCTCTCTGGTCAGAGCCATGACCTCTTAGACCTCCTTTCCCCTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR CCA 72 bp GGGAAGGGTTGGGAGGCAAGGGACCAGCCAGTTCTATaGAGGAGTCGAAAGGTTTTCTCTTTGTCACCGATC +
Preference number: 3 (lower is better)
Translates to: GKGWEARDQPVL*RSRKVFSLSPI
Trigger: GATCGGTGACAAAGAGAAAACCTTTCGACTCCTCCATAGAACTGGCTGGTCCCTTGCCTCCCAACCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR TCA 72 bp TGCAAGCAGAGTGCAGCTCAGCAGGACTCTTGCTCATaGGGGAGTTTGGGTGGGGTACAATGCCTGCTTTAT +
Preference number: 3 (lower is better)
Translates to: CKQSAAQQDSCS*GSLGGVQCLLY
Trigger: ATAAAGCAGGCATTGTACCCCACCCAAACTCCCTCATGAGCAAGAGTCCTGCTGAGCTGCACTCTGCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR-3UTR CAA 90 bp AGGCCTTCAGATAAGATGGATGAAATTGTAGGGGGTAAAAATGGGCGGGATGGGGGAGGGGGCAGTGGTTaGATAGCCAGATCACCTGGA +
Preference number: 3 (lower is better)
Translates to: RPSDKMDEIVGGKNGRDGGGGSG*IARSPG
Trigger: TCCAGGTGATCTGGCTATCAAACCACTGCCCCCTCC...CCCATCCCGCCCATTTTTACCCCCTACAATTTCATCCATCTTATCTGAAGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR TCA 72 bp ACCAGAGAACAGCCATCAAAAGCAGGTGCAAAAAGCTaGAGGGTGAGGAGAGCCACTGGACTCTCAGAGACA +
Preference number: 3 (lower is better)
Translates to: TREQPSKAGAKS*RVRRATGLSET
Trigger: TGTCTCTGAGAGTCCAGTGGCTCTCCTCACCCTTCAGCTTTTTGCACCTGCTTTTGATGGCTGTTCTCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR TCA 72 bp GGCTCATCTGCCCCTCATGTACACAGACAGCAGCCATaGAAATATACCAACTCTGGCAGTATTAACGGCAGG +
Preference number: 3 (lower is better)
Translates to: GSSAPHVHRQQP*KYTNSGSINGR
Trigger: CCTGCCGTTAATACTGCCAGAGTTGGTATATTTTCATGGCTGCTGTCTGTGTACATGAGGGGCAGATGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR CCA 72 bp GTGCAGCTCAGCAGGACTCTTGCTCATGAGGGAGTTTaGGTGGGGTACAATGCCTGCTTTATTTTGTTCTGT +
Preference number: 3 (lower is better)
Translates to: VQLSRTLAHEGV*VGYNACFILFC
Trigger: ACAGAACAAAATAAAGCAGGCATTGTACCCCACCCAAACTCCCTCATGAGCAAGAGTCCTGCTGAGCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR CCA 72 bp AGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAGTTTTaGAATCTGACACAGCTTTCCCTAGGAGGAACCCAG +
Preference number: 3 (lower is better)
Translates to: RKEGRKEGRKKF*NLTQLSLGGTQ
Trigger: CTGGGTTCCTCCTAGGGAAAGCTGTGTCAGATTCCAAAACTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR CCA 72 bp AGCTCAGCAGGACTCTTGCTCATGAGGGAGTTTGGGTaGGGTACAATGCCTGCTTTATTTTGTTCTGTGTTC +
Preference number: 3 (lower is better)
Translates to: SSAGLLLMREFG*GTMPALFCSVF
Trigger: GAACACAGAACAAAATAAAGCAGGCATTGTACCCCACCCAAACTCCCTCATGAGCAAGAGTCCTGCTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR TCA 72 bp ATACAGTTCAGATCCACAGACGGTGTAAGCCCCTTGTaGCCAGAGAACAGCCATCAAAAGCAGGTGCAAAAA +
Preference number: 3 (lower is better)
Translates to: IQFRSTDGVSPL*PENSHQKQVQK
Trigger: TTTTTGCACCTGCTTTTGATGGCTGTTCTCTGGTCACAAGGGGCTTACACCGTCTGTGGATCTGAACTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR-3UTR CAA 90 bp AGGCCTTCAGATAAGATGGATGAAATTGTAGGGGGTAAAAATGGGCGGGATGGGAGGAAGGAAGAAGTTTaGGAATCTGACACAGCTTTC +
Preference number: 3 (lower is better)
Translates to: RPSDKMDEIVGGKNGRDGRKEEV*ESDTAF
Trigger: GAAAGCTGTGTCAGATTCCAAAACTTCTTCCTTCCT...CCCATCCCGCCCATTTTTACCCCCTACAATTTCATCCATCTTATCTGAAGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR TCA 72 bp GGGTACAATGCCTGCTTTATTTTGTTCTGTGTTCTCTaGAAGCTAAGGGAAGGAAGGAAGGAAGGAAGGAAG +
Preference number: 3 (lower is better)
Translates to: GYNACFILFCVL*KLREGRKEGRK
Trigger: CTTCCTTCCTTCCTTCCTTCCTTCCCTTAGCTTTCAGAGAACACAGAACAAAATAAAGCAGGCATTGTACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
3UTR CCA 72 bp TCTTACACATACATAAAGCACGAAATGAAGTGGGTGTaGGTCCGTCCCAAAGCAAAGGAGATTATTACAAAT +
Preference number: 3 (lower is better)
Translates to: SYTYIKHEMKWV*VRPKAKEIITN
Trigger: ATTTGTAATAATCTCCTTTGCTTTGGGACGGACCCACACCCACTTCATTTCGTGCTTTATGTATGTGTAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CCA 90 bp GAAAGCCTCTCCCGCCATGACGCCAGAGCTGCCACTCTGAGCATCAGCTGGGGACACCCCCTGCCAGTGTaGGCTCCTCAGGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ESLSRHDARAATLSISWGHPLPV*APQALQ
Trigger: CTGCAGGGCCTGAGGAGCCCACACTGGCAGGGGGTG...TCCCCAGCTGATGCTCAGAGTGGCAGCTCTGGCGTCATGGCGGGAGAGGCTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR GCA 90 bp GGCTACAGCAGCGGCCACCCCTCGGACTTTCTGTTCCTTTTCATGGCCCTTTGCCTTCTCCACTGGGGGTaGCAGGGGCTCCTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: GYSSGHPSDFLFLFMALCLLHWG*QGLLPP
Trigger: GGGCGGCAGGAGCCCCTGGCACCCCCAGTGGAGAAG...GCAAAGGGCCATGAAAAGGAACAGAAAGTCCGAGGGGTGGCCGCTGCTGTAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR TCA 90 bp GCGTGGCTACAGCAGCGGCCACCCCTCGGACTTTCTGTTCCTTTTCATGGCCCTAGCGAAGGTGGCGCTTaGGAGCCGTGTGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: AWLQQRPPLGLSVPFHGPSEGGA*EPCGWG
Trigger: TCCCCAGCCACACGGCTCTCAAGCGCCACCTTCGCT...AGGGCCATGAAAAGGAACAGAAAGTCCGAGGGGTGGCCGCTGCTGTAGCCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CCA 90 bp GAAAGCCTCTCCCGCCATGACGCCAGAGCTGCCACTCTGAGCATCAGCTGGGGACCAGGTCCTCCGCCTTaGCTTGCAGTGTGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: ESLSRHDARAATLSISWGPGPPP*LAVWPC
Trigger: ACACGGCCACACTGCAAGCCAAGGCGGAGGACCTGG...TCCCCAGCTGATGCTCAGAGTGGCAGCTCTGGCGTCATGGCGGGAGAGGCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR TCA 90 bp GAAAGCCTCTCCCGCCATGACGCCAGAGCTGCCACTCTGAGCATCAGCTGGGGAGACCCCCGTAGGTGCTaGAGTCCATGGAGACTGCCA +
Preference number: 4 (lower is better)
Translates to: ESLSRHDARAATLSISWGDPRRC*SPWRLP
Trigger: TGGCAGTCTCCATGGACTTCAGCACCTACGGGGGTC...TCCCCAGCTGATGCTCAGAGTGGCAGCTCTGGCGTCATGGCGGGAGAGGCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR GCA 90 bp CTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTCCTGCCACTGCTCTACCATGTGGTGTCGCCCACCCCCTaGCAGTGTGGGCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LCLVLARLCWLLPLLYHVVSPTP*QCGLLR
Trigger: CCTGAGGAGCCCACACTGGCAGGGGGTGGGCGACAC...CACATGGTAGAGCAGTGGCAGGAGCCAGCAAAGGCGAGCTAGAACCAGACAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp CTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTCCTGCCACTGCTCTACCATGTGCGACCCCACACACGCTaGACTGCTCCCCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: LCLVLARLCWLLPLLYHVRPHTR*TAPPEG
Trigger: GCCCTCTGGGGGAGCAGTGCAGCGTGTGTGGGGTCG...CACATGGTAGAGCAGTGGCAGGAGCCAGCAAAGGCGAGCTAGAACCAGACAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR TCA 90 bp CCACTCCCACCTCCACCACGTAAAGCTCACCTGAGAGGGGGCATTCACTCCCCAGAAAGAGGTGGAGACTaGGGGGCTCTGGTCCACCAT +
Preference number: 4 (lower is better)
Translates to: PLPPPPRKAHLRGGIHSPERGGD*GALVHH
Trigger: ATGGTGGACCAGAGCCCCTCAGTCTCCACCTCTTTC...TGGGGAGTGAATGCCCCCTCTCAGGTGAGCTTTACGTGGTGGAGGTGGGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR TCA 90 bp GAAAGCCTCTCCCGCCATGACGCCAGAGCTGCCACTCTGAGCATCAGCTGGGGAAGTGCGCTTTGTGCCTaGAAGCGTTTCCCACACAGC +
Preference number: 4 (lower is better)
Translates to: ESLSRHDARAATLSISWGSALCA*KRFPHS
Trigger: GCTGTGTGGGAAACGCTTTCAGGCACAAAGCGCACT...TCCCCAGCTGATGCTCAGAGTGGCAGCTCTGGCGTCATGGCGGGAGAGGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR GCA 90 bp GCGTGGCTACAGCAGCGGCCACCCCTCGGACTTTCTGTTCCTTTTCATGGCCCTGGGTGGCTAGGGTTCTaGAGCTGGATCATCCCCATC +
Preference number: 4 (lower is better)
Translates to: AWLQQRPPLGLSVPFHGPGWLGF*SWIIPI
Trigger: GATGGGGATGATCCAGCTGCAGAACCCTAGCCACCC...AGGGCCATGAAAAGGAACAGAAAGTCCGAGGGGTGGCCGCTGCTGTAGCCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR GCA 90 bp CCACTCCCACCTCCACCACGTAAAGCTCACCTGAGAGGGGGCATTCACTCCCCACAAGCTGTCCACGGCTaGCTTGGTAGGACTCATGGC +
Preference number: 4 (lower is better)
Translates to: PLPPPPRKAHLRGGIHSPQAVHG*LGRTHG
Trigger: GCCATGAGTCCTACCAAGGCAGCCGTGGACAGCTTG...TGGGGAGTGAATGCCCCCTCTCAGGTGAGCTTTACGTGGTGGAGGTGGGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR GCA 90 bp GGCCTCCACTCAGATCCTGAATGGTCCACTTTTTCCTACAGCTTCCAGCCAGAGGTGTCGCCCACCCCCTaGCAGTGTGGGCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GLHSDPEWSTFSYSFQPEVSPTP*QCGLLR
Trigger: CCTGAGGAGCCCACACTGGCAGGGGGTGGGCGACAC...CTCTGGCTGGAAGCTGTAGGAAAAAGTGGACCATTCAGGATCTGAGTGGAGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR TCA 90 bp GGCAGTGGTTTGATAGCCAGATCACCTGGAGCCCCAGGAAATAATCCAAGGCCAAGCGAAGGTGGCGCTTaGGAGCCGTGTGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GSGLIARSPGAPGNNPRPSEGGA*EPCGWG
Trigger: TCCCCAGCCACACGGCTCTCAAGCGCCACCTTCGCT...TGGCCTTGGATTATTTCCTGGGGCTCCAGGTGATCTGGCTATCAAACCACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp CCACTCCCACCTCCACCACGTAAAGCTCACCTGAGAGGGGGCATTCACTCCCCACATCCCGGAAGCAGCTaGCGCAGAACTCACACTCAT +
Preference number: 4 (lower is better)
Translates to: PLPPPPRKAHLRGGIHSPHPGSS*RRTHTH
Trigger: ATGAGTGTGAGTTCTGCGGCAGCTGCTTCCGGGATG...TGGGGAGTGAATGCCCCCTCTCAGGTGAGCTTTACGTGGTGGAGGTGGGAGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CCA 90 bp GGCAGTGGTTTGATAGCCAGATCACCTGGAGCCCCAGGAAATAATCCAAGGCCAAGCAGCCCCGTGGGGTaGCTAGGGTTCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GSGLIARSPGAPGNNPRPSSPVG*LGFCSW
Trigger: CCAGCTGCAGAACCCTAGCCACCCCACGGGGCTGCT...TGGCCTTGGATTATTTCCTGGGGCTCCAGGTGATCTGGCTATCAAACCACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp GGGCCTTTCAATAGGATGATGAGATTCCTTCCCCTAGGGGCTGAGCTGCGGTTGGCTAGCACCGTCCGGTaGGCATGGAACTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GPFNRMMRFLPLGAELRLASTVR*AWNSWL
Trigger: CAGCCAGGAGTTCCATGCCCACCGGACGGTGCTAGC...CAACCGCAGCTCAGCCCCTAGGGGAAGGAATCTCATCATCCTATTGAAAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CCA 90 bp GGCTACAGCAGCGGCCACCCCTCGGACTTTCTGTTCCTTTTCATGGCCCTTTGCCCCCACCGTCAGCCATaGTGGCCTCTGTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: GYSSGHPSDFLFLFMALCPHRQP*WPLCHC
Trigger: ACAATGACACAGAGGCCACCATGGCTGACGGTGGGG...GCAAAGGGCCATGAAAAGGAACAGAAAGTCCGAGGGGTGGCCGCTGCTGTAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CCA 90 bp GGCAGTGGTTTGATAGCCAGATCACCTGGAGCCCCAGGAAATAATCCAAGGCCAGGCTCTGGTCCACCATaGGCCCAGGGAGGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GSGLIARSPGAPGNNPRPGSGPP*AQGGSV
Trigger: GACAGAGCCTCCCTGGGCCCATGGTGGACCAGAGCC...TGGCCTTGGATTATTTCCTGGGGCTCCAGGTGATCTGGCTATCAAACCACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp GGCTACAGCAGCGGCCACCCCTCGGACTTTCTGTTCCTTTTCATGGCCCTTTGCCTCAGGCCCTGCAGGTaGCTGAAGAGTTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: GYSSGHPSDFLFLFMALCLRPCR*LKSSLQ
Trigger: CTGCAAGGAACTCTTCAGCCACCTGCAGGGCCTGAG...GCAAAGGGCCATGAAAAGGAACAGAAAGTCCGAGGGGTGGCCGCTGCTGTAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CCA 90 bp CAGCTCAGCAGGACTCTTGCTCATGAGGGAGTTTGGGTGGGGTACAATGCCTGCCAAATGCTTCTCCACTaGGGGTGCCAGGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: QLSRTLAHEGVWVGYNACQMLLH*GCQGLL
Trigger: CAGGAGCCCCTGGCACCCCCAGTGGAGAAGCATTTG...GCAGGCATTGTACCCCACCCAAACTCCCTCATGAGCAAGAGTCCTGCTGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CCA 90 bp CTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTCCTGCCACTGCTCTACCATGTGCGCTTGAGAGCCGTGTaGCTGGGGAAGGTGCGGTTG +
Preference number: 4 (lower is better)
Translates to: LCLVLARLCWLLPLLYHVRLRAV*LGKVRL
Trigger: CAACCGCACCTTCCCCAGCCACACGGCTCTCAAGCG...CACATGGTAGAGCAGTGGCAGGAGCCAGCAAAGGCGAGCTAGAACCAGACAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp CCACTCCCACCTCCACCACGTAAAGCTCACCTGAGAGGGGGCATTCACTCCCCAGGATCTCAAACATCTTaGTGGTGCAGGCTAGCACCG +
Preference number: 4 (lower is better)
Translates to: PLPPPPRKAHLRGGIHSPGSQTS*WCRLAP
Trigger: CGGTGCTAGCCTGCACCAGCAAGATGTTTGAGATCC...TGGGGAGTGAATGCCCCCTCTCAGGTGAGCTTTACGTGGTGGAGGTGGGAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR GCA 90 bp TCTTTTCTCCGTAGTCTTTCCACTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTCTTCTCCACTGGGGGTaGCAGGGGCTCCTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: SFLRSLSTLSGSSSPLLALLHWG*QGLLPP
Trigger: GGGCGGCAGGAGCCCCTGGCACCCCCAGTGGAGAAG...AGCCAGCAAAGGCGAGCTAGAACCAGACAAAGTGGAAAGACTACGGAGAAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp GCAAACATGACAAGAGGCCAGAAGCGCCATCAGCTCCTCCCCTCTGCTCCCTGGTCACTGAAGACGGCATaGTCAACACAGCATCGGCCT +
Preference number: 4 (lower is better)
Translates to: ANMTRGQKRHQLLPSAPWSLKTA*STQHRP
Trigger: AGGCCGATGCTGTGTTGAGCATGCCGTCTTCAGTGA...CCAGGGAGCAGAGGGGAGGAGCTGATGGCGCTTCTGGCCTCTTGTCATGTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CCA 90 bp GGCAGTGGTTTGATAGCCAGATCACCTGGAGCCCCAGGAAATAATCCAAGGCCAACCGTCCGGTGGGCATaGAACTCCTGGCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: GSGLIARSPGAPGNNPRPTVRWA*NSWLST
Trigger: GGTGGACAGCCAGGAGTTCCATGCCCACCGGACGGT...TGGCCTTGGATTATTTCCTGGGGCTCCAGGTGATCTGGCTATCAAACCACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp GGCAGTGGTTTGATAGCCAGATCACCTGGAGCCCCAGGAAATAATCCAAGGCCACCAGGTCCTCCGCCTTaGCTTGCAGTGTGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: GSGLIARSPGAPGNNPRPPGPPP*LAVWPC
Trigger: ACACGGCCACACTGCAAGCCAAGGCGGAGGACCTGG...TGGCCTTGGATTATTTCCTGGGGCTCCAGGTGATCTGGCTATCAAACCACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp CCACTCCCACCTCCACCACGTAAAGCTCACCTGAGAGGGGGCATTCACTCCCCAGTGTGGATGCGCTTGTaGCTCTTGAGTGTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: PLPPPPRKAHLRGGIHSPVWMRL*LLSVLS
Trigger: TGAGAGCACACTCAAGAGCCACAAGCGCATCCACAC...TGGGGAGTGAATGCCCCCTCTCAGGTGAGCTTTACGTGGTGGAGGTGGGAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR TCA 90 bp GGCCTCCACTCAGATCCTGAATGGTCCACTTTTTCCTACAGCTTCCAGCCAGAGCCAGCCAGTCGCATCTaGTTGGCCTTGCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLHSDPEWSTFSYSFQPEPASRI*LALHSS
Trigger: GCTGCTGTGCAAGGCCAATCAGATGCGACTGGCTGG...CTCTGGCTGGAAGCTGTAGGAAAAAGTGGACCATTCAGGATCTGAGTGGAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR GCA 90 bp CTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTCCTGCCACTGCTCTACCATGTGCAAGCTGTCCACGGCTaGCTTGGTAGGACTCATGGC +
Preference number: 4 (lower is better)
Translates to: LCLVLARLCWLLPLLYHVQAVHG*LGRTHG
Trigger: GCCATGAGTCCTACCAAGGCAGCCGTGGACAGCTTG...CACATGGTAGAGCAGTGGCAGGAGCCAGCAAAGGCGAGCTAGAACCAGACAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp GGGCCTTTCAATAGGATGATGAGATTCCTTCCCCTAGGGGCTGAGCTGCGGTTGACAGGAGGCGAGAGCTaGTCACCACTCTCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: GPFNRMMRFLPLGAELRLTGGES*SPLSSL
Trigger: GAGAGAGGAGAGTGGTGAGCAGCTCTCGCCTCCTGT...CAACCGCAGCTCAGCCCCTAGGGGAAGGAATCTCATCATCCTATTGAAAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR GCA 90 bp CTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTCCTGCCACTGCTCTACCATGTGACAGGAGGCGAGAGCTaGTCACCACTCTCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LCLVLARLCWLLPLLYHVTGGES*SPLSSL
Trigger: GAGAGAGGAGAGTGGTGAGCAGCTCTCGCCTCCTGT...CACATGGTAGAGCAGTGGCAGGAGCCAGCAAAGGCGAGCTAGAACCAGACAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp GCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTCGACCCCACACACGCTaGACTGCTCCCCCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: APGNNPRPSNYQASFSFSRPHTR*TAPPEG
Trigger: GCCCTCTGGGGGAGCAGTGCAGCGTGTGTGGGGTCG...AGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp TTGGGAGGCAAGGGACCAGCCAGTTCTATGGAGGAGTCGAAAGGTTTTCTCTTTAGCAGCCCCGTGGGGTaGCTAGGGTTCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LGGKGPASSMEESKGFLFSSPVG*LGFCSW
Trigger: CCAGCTGCAGAACCCTAGCCACCCCACGGGGCTGCT...AAAGAGAAAACCTTTCGACTCCTCCATAGAACTGGCTGGTCCCTTGCCTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CCA 90 bp GGCCTCCACTCAGATCCTGAATGGTCCACTTTTTCCTACAGCTTCCAGCCAGAGCCAGTCGCATCTGATTaGCCTTGCACAGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: GLHSDPEWSTFSYSFQPEPVASD*PCTAAP
Trigger: CGGGGCTGCTGTGCAAGGCCAATCAGATGCGACTGG...CTCTGGCTGGAAGCTGTAGGAAAAAGTGGACCATTCAGGATCTGAGTGGAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CCA 90 bp GGCAGTGGTTTGATAGCCAGATCACCTGGAGCCCCAGGAAATAATCCAAGGCCATCTGTCCAGCCACACTaGCGTAGCCACTCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: GSGLIARSPGAPGNNPRPSVQPH*RSHSPR
Trigger: GCGAGGAGAGTGGCTACGCCAGTGTGGCTGGACAGA...TGGCCTTGGATTATTTCCTGGGGCTCCAGGTGATCTGGCTATCAAACCACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp GGAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCGGCTCTGGTCCACCATaGGCCCAGGGAGGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GAPGNNPRPSNYQASFSFGSGPP*AQGGSV
Trigger: GACAGAGCCTCCCTGGGCCCATGGTGGACCAGAGCC...GAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp CAGCTCAGCAGGACTCTTGCTCATGAGGGAGTTTGGGTGGGGTACAATGCCTGCAGAGACCGAAAGAGGTaGAGACTGAGGGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: QLSRTLAHEGVWVGYNACRDRKR*RLRGSG
Trigger: ACCAGAGCCCCTCAGTCTCCACCTCTTTCGGTCTCT...GCAGGCATTGTACCCCACCCAAACTCCCTCATGAGCAAGAGTCCTGCTGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CCA 90 bp CCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTCCACCCCCTGCCAGTGTaGGCTCCTCAGGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PQEIIQGQVTIRLPSPSLHPLPV*APQALQ
Trigger: CTGCAGGGCCTGAGGAGCCCACACTGGCAGGGGGTG...GAGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp GGCAGTGGTTTGATAGCCAGATCACCTGGAGCCCCAGGAAATAATCCAAGGCCACAAATGCTTCTCCACTaGGGGTGCCAGGGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GSGLIARSPGAPGNNPRPQMLLH*GCQGLL
Trigger: CAGGAGCCCCTGGCACCCCCAGTGGAGAAGCATTTG...TGGCCTTGGATTATTTCCTGGGGCTCCAGGTGATCTGGCTATCAAACCACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp GGAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCCTGCGCACGCCTGCGTaGACCTCCATGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GAPGNNPRPSNYQASFSFLRTPA*TSMCCW
Trigger: CCAGCAGCACATGGAGGTCCACGCAGGCGTGCGCAG...GAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp GGCTACAGCAGCGGCCACCCCTCGGACTTTCTGTTCCTTTTCATGGCCCTTTGCTCATGTGTTTCTGCATaGAGGAGAGGCTGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: GYSSGHPSDFLFLFMALCSCVSA*RRGWGS
Trigger: ACTGCCCCAGCCTCTCCTCCATGCAGAAACACATGA...GCAAAGGGCCATGAAAAGGAACAGAAAGTCCGAGGGGTGGCCGCTGCTGTAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR TCA 90 bp GGCCTCCACTCAGATCCTGAATGGTCCACTTTTTCCTACAGCTTCCAGCCAGAGCAGGGCATCCTCCTTTaGGAACTGGGCACCGCATTG +
Preference number: 4 (lower is better)
Translates to: GLHSDPEWSTFSYSFQPEQGILL*ELGTAL
Trigger: CAATGCGGTGCCCAGTTCTCAAAGGAGGATGCCCTG...CTCTGGCTGGAAGCTGTAGGAAAAAGTGGACCATTCAGGATCTGAGTGGAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR TCA 90 bp CTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTCCTGCCACTGCTCTACCATGTGAGTGCGCTTTGTGCCTaGAAGCGTTTCCCACACAGC +
Preference number: 4 (lower is better)
Translates to: LCLVLARLCWLLPLLYHVSALCA*KRFPHS
Trigger: GCTGTGTGGGAAACGCTTTCAGGCACAAAGCGCACT...CACATGGTAGAGCAGTGGCAGGAGCCAGCAAAGGCGAGCTAGAACCAGACAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp GGCCTCCACTCAGATCCTGAATGGTCCACTTTTTCCTACAGCTTCCAGCCAGAGTGGACCTCCATGTGCTaGTGGAGTGCGCTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: GLHSDPEWSTFSYSFQPEWTSMC*WSALCA
Trigger: GGCACAAAGCGCACTCCAGCAGCACATGGAGGTCCA...CTCTGGCTGGAAGCTGTAGGAAAAAGTGGACCATTCAGGATCTGAGTGGAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR GCA 90 bp GGCAGTGGTTTGATAGCCAGATCACCTGGAGCCCCAGGAAATAATCCAAGGCCAGCGTGGACCTCCATGTaGTGCTGGAGTGCGCTTTGT +
Preference number: 4 (lower is better)
Translates to: GSGLIARSPGAPGNNPRPAWTSM*CWSALC
Trigger: ACAAAGCGCACTCCAGCAGCACATGGAGGTCCACGC...TGGCCTTGGATTATTTCCTGGGGCTCCAGGTGATCTGGCTATCAAACCACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp GGAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCGCTAGCACCGTCCGGTaGGCATGGAACTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GAPGNNPRPSNYQASFSFASTVR*AWNSWL
Trigger: CAGCCAGGAGTTCCATGCCCACCGGACGGTGCTAGC...GAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp GGGCCTTTCAATAGGATGATGAGATTCCTTCCCCTAGGGGCTGAGCTGCGGTTGCATCGGCCTTGTGGTTaGGCAGCACCGAGTAGATAC +
Preference number: 4 (lower is better)
Translates to: GPFNRMMRFLPLGAELRLHRPCG*AAPSRY
Trigger: GTATCTACTCGGTGCTGCCCAACCACAAGGCCGATG...CAACCGCAGCTCAGCCCCTAGGGGAAGGAATCTCATCATCCTATTGAAAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CCA 90 bp CCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTCCTGCGCACGCCTGCGTaGACCTCCATGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PQEIIQGQVTIRLPSPSLLRTPA*TSMCCW
Trigger: CCAGCAGCACATGGAGGTCCACGCAGGCGTGCGCAG...GAGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp GGCAGTGGTTTGATAGCCAGATCACCTGGAGCCCCAGGAAATAATCCAAGGCCAGTATGTGAGCGAAGGTaGCGCTTGAGAGCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: GSGLIARSPGAPGNNPRPVCERR*RLRAVW
Trigger: CCACACGGCTCTCAAGCGCCACCTTCGCTCACATAC...TGGCCTTGGATTATTTCCTGGGGCTCCAGGTGATCTGGCTATCAAACCACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp CTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTCCTGCCACTGCTCTACCATGTGTCTCGGGAGCGCTGGTaGCAGAGTTTGCACTCAAAG +
Preference number: 4 (lower is better)
Translates to: LCLVLARLCWLLPLLYHVSRERW*QSLHSK
Trigger: CTTTGAGTGCAAACTCTGCCACCAGCGCTCCCGAGA...CACATGGTAGAGCAGTGGCAGGAGCCAGCAAAGGCGAGCTAGAACCAGACAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp CCACTGGGACCTTTCTCCAGAGTGTTTCCGGCTGAACTAAAGCTGGGCACTGATGCATGGAGGAGAGGCTaGGGCAGTATTCCGTGCAGA +
Preference number: 4 (lower is better)
Translates to: PLGPFSRVFPAELKLGTDAWRRG*GSIPCR
Trigger: TCTGCACGGAATACTGCCCCAGCCTCTCCTCCATGC...ATCAGTGCCCAGCTTTAGTTCAGCCGGAAACACTCTGGAGAAAGGTCCCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CCA 90 bp GGCAGTGGTTTGATAGCCAGATCACCTGGAGCCCCAGGAAATAATCCAAGGCCAGCATGGAGGAGAGGCTaGGGCAGTATTCCGTGCAGA +
Preference number: 4 (lower is better)
Translates to: GSGLIARSPGAPGNNPRPAWRRG*GSIPCR
Trigger: TCTGCACGGAATACTGCCCCAGCCTCTCCTCCATGC...TGGCCTTGGATTATTTCCTGGGGCTCCAGGTGATCTGGCTATCAAACCACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR TCA 90 bp GGAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCGGCCCTGCAGGTGGCTaGAGAGTTCCTTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: GAPGNNPRPSNYQASFSFGPAGG*RVPCRS
Trigger: ACTCCTGCAAGGAACTCTTCAGCCACCTGCAGGGCC...GAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR TCA 90 bp GGAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCGACCCCCGTAGGTGCTaGAGTCCATGGAGACTGCCA +
Preference number: 4 (lower is better)
Translates to: GAPGNNPRPSNYQASFSFDPRRC*SPWRLP
Trigger: TGGCAGTCTCCATGGACTTCAGCACCTACGGGGGTC...GAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp CCACTGGGACCTTTCTCCAGAGTGTTTCCGGCTGAACTAAAGCTGGGCACTGATCAAACATCTTGCTGGTaGAGGCTAGCACCGTCCGGT +
Preference number: 4 (lower is better)
Translates to: PLGPFSRVFPAELKLGTDQTSCW*RLAPSG
Trigger: ACCGGACGGTGCTAGCCTGCACCAGCAAGATGTTTG...ATCAGTGCCCAGCTTTAGTTCAGCCGGAAACACTCTGGAGAAAGGTCCCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR GCA 90 bp GCGTGGCTACAGCAGCGGCCACCCCTCGGACTTTCTGTTCCTTTTCATGGCCCTCTCTCCTCGCTGGAATaGTTCGAGATAAAGATGTTC +
Preference number: 4 (lower is better)
Translates to: AWLQQRPPLGLSVPFHGPLSSLE*FEIKMF
Trigger: GAACATCTTTATCTCGAAGCATTCCAGCGAGGAGAG...AGGGCCATGAAAAGGAACAGAAAGTCCGAGGGGTGGCCGCTGCTGTAGCCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR GCA 90 bp TTGGGAGGCAAGGGACCAGCCAGTTCTATGGAGGAGTCGAAAGGTTTTCTCTTTCCTGTGCTGCTCCACTaGCTCGTTGTCCGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LGGKGPASSMEESKGFLFPVLLH*LVVRKL
Trigger: GAGCTTCCGGACAACGAGGCAGTGGAGCAGCACAGG...AAAGAGAAAACCTTTCGACTCCTCCATAGAACTGGCTGGTCCCTTGCCTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR GCA 90 bp GGAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCATAGCTGCGCACGCCTaGGTGGACCTCCATGTGCTG +
Preference number: 4 (lower is better)
Translates to: GAPGNNPRPSNYQASFSFIAAHA*VDLHVL
Trigger: CAGCACATGGAGGTCCACGCAGGCGTGCGCAGCTAT...GAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp CCACTGGGACCTTTCTCCAGAGTGTTTCCGGCTGAACTAAAGCTGGGCACTGATTGGGCATGGAACTCCTaGCTGTCCACCATGATGACC +
Preference number: 4 (lower is better)
Translates to: PLGPFSRVFPAELKLGTDWAWNS*LSTMMT
Trigger: GGTCATCATGGTGGACAGCCAGGAGTTCCATGCCCA...ATCAGTGCCCAGCTTTAGTTCAGCCGGAAACACTCTGGAGAAAGGTCCCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CCA 90 bp GCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTACCGTCCGGTGGGCATaGAACTCCTGGCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: APGNNPRPSNYQASFSFSTVRWA*NSWLST
Trigger: GGTGGACAGCCAGGAGTTCCATGCCCACCGGACGGT...AGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp GGCTACAGCAGCGGCCACCCCTCGGACTTTCTGTTCCTTTTCATGGCCCTTTGCTGCTGGCTGTTTCGGTaGAAGAGGATCTCAAACATC +
Preference number: 4 (lower is better)
Translates to: GYSSGHPSDFLFLFMALCCWLFR*KRISNI
Trigger: GATGTTTGAGATCCTCTTCCACCGAAACAGCCAGCA...GCAAAGGGCCATGAAAAGGAACAGAAAGTCCGAGGGGTGGCCGCTGCTGTAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CCA 90 bp GGCAGTGGTTTGATAGCCAGATCACCTGGAGCCCCAGGAAATAATCCAAGGCCACATCGGCCTTGTGGTTaGGCAGCACCGAGTAGATAC +
Preference number: 4 (lower is better)
Translates to: GSGLIARSPGAPGNNPRPHRPCG*AAPSRY
Trigger: GTATCTACTCGGTGCTGCCCAACCACAAGGCCGATG...TGGCCTTGGATTATTTCCTGGGGCTCCAGGTGATCTGGCTATCAAACCACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp CTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTCCTGCCACTGCTCTACCATGTGGTGTGGATGCGCTTGTaGCTCTTGAGTGTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: LCLVLARLCWLLPLLYHVVWMRL*LLSVLS
Trigger: TGAGAGCACACTCAAGAGCCACAAGCGCATCCACAC...CACATGGTAGAGCAGTGGCAGGAGCCAGCAAAGGCGAGCTAGAACCAGACAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp GGCCTCCACTCAGATCCTGAATGGTCCACTTTTTCCTACAGCTTCCAGCCAGAGTCTCGGGAGCGCTGGTaGCAGAGTTTGCACTCAAAG +
Preference number: 4 (lower is better)
Translates to: GLHSDPEWSTFSYSFQPESRERW*QSLHSK
Trigger: CTTTGAGTGCAAACTCTGCCACCAGCGCTCCCGAGA...CTCTGGCTGGAAGCTGTAGGAAAAAGTGGACCATTCAGGATCTGAGTGGAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR TCA 90 bp GCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTCCAGCCAGTCGCATCTaGTTGGCCTTGCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: APGNNPRPSNYQASFSFSPASRI*LALHSS
Trigger: GCTGCTGTGCAAGGCCAATCAGATGCGACTGGCTGG...AGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR TCA 90 bp GGAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCGAAAGAGGTGGAGACTaGGGGGCTCTGGTCCACCAT +
Preference number: 4 (lower is better)
Translates to: GAPGNNPRPSNYQASFSFERGGD*GALVHH
Trigger: ATGGTGGACCAGAGCCCCTCAGTCTCCACCTCTTTC...GAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR TCA 90 bp AATGACACCCTCCCAGTTCCTCTAATATCTCTCACAACCAAAAGGGTGGGGAAGGTCCCCCATCCCTCCTaGGATGCTAGACTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: NDTLPVPLISLTTKRVGKVPHPS*DARLSC
Trigger: GCAGCTGAGTCTAGCATCTCAGGAGGGATGGGGGAC...CTTCCCCACCCTTTTGGTTGTGAGAGATATTAGAGGAACTGGGAGGGTGTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR TCA 90 bp GCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTGTCCCCCATCCCTCCTaGGATGCTAGACTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: APGNNPRPSNYQASFSFSVPHPS*DARLSC
Trigger: GCAGCTGAGTCTAGCATCTCAGGAGGGATGGGGGAC...AGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR TCA 90 bp GGAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCCAGGGCATCCTCCTTTaGGAACTGGGCACCGCATTG +
Preference number: 4 (lower is better)
Translates to: GAPGNNPRPSNYQASFSFQGILL*ELGTAL
Trigger: CAATGCGGTGCCCAGTTCTCAAAGGAGGATGCCCTG...GAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp TACAGTTTGAAAAGATCAGCTCAGCCCTCTCCAGCTTTTATGGTTGGGCGGGGGGAAGTCCATGGAGACTaGCAGGGCAGGTTGCACATG +
Preference number: 4 (lower is better)
Translates to: YSLKRSAQPSPAFMVGRGEVHGD*QGRLHM
Trigger: CATGTGCAACCTGCCCTGGCAGTCTCCATGGACTTC...CCCCCGCCCAACCATAAAAGCTGGAGAGGGCTGAGCTGATCTTTTCAAACTGTA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR GCA 90 bp GAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCCTGTGCTGCTCCACTaGCTCGTTGTCCGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: EPQEIIQGQVTIRLPSPSPVLLH*LVVRKL
Trigger: GAGCTTCCGGACAACGAGGCAGTGGAGCAGCACAGG...AGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp CTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTCCTGCCACTGCTCTACCATGTGGTTTTCATCCCACTGTaGAGTTTCCTGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LCLVLARLCWLLPLLYHVVFIPL*SFLCCS
Trigger: GGAGCAGCACAGGAAACTGCACAGTGGGATGAAAAC...CACATGGTAGAGCAGTGGCAGGAGCCAGCAAAGGCGAGCTAGAACCAGACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp AGGCCTTCAGATAAGATGGATGAAATTGTAGGGGGTAAAAATGGGCGGGATGGGATAGCTGCGCACGCCTaGGTGGACCTCCATGTGCTG +
Preference number: 4 (lower is better)
Translates to: RPSDKMDEIVGGKNGRDGIAAHA*VDLHVL
Trigger: CAGCACATGGAGGTCCACGCAGGCGTGCGCAGCTAT...CCCATCCCGCCCATTTTTACCCCCTACAATTTCATCCATCTTATCTGAAGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR GCA 90 bp CTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTCCTGCCACTGCTCTACCATGTGTGGGGAAGGTGCGGTTaGACTCACTGCAAATATAGC +
Preference number: 4 (lower is better)
Translates to: LCLVLARLCWLLPLLYHVWGRCG*THCKYS
Trigger: GCTATATTTGCAGTGAGTGCAACCGCACCTTCCCCA...CACATGGTAGAGCAGTGGCAGGAGCCAGCAAAGGCGAGCTAGAACCAGACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp TCTTTTCTCCGTAGTCTTTCCACTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTCCAGTCGCATCTGATTaGCCTTGCACAGCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: SFLRSLSTLSGSSSPLLAPVASD*PCTAAP
Trigger: CGGGGCTGCTGTGCAAGGCCAATCAGATGCGACTGG...AGCCAGCAAAGGCGAGCTAGAACCAGACAAAGTGGAAAGACTACGGAGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp GGAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCCCCCACCGTCAGCCATaGTGGCCTCTGTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: GAPGNNPRPSNYQASFSFPHRQP*WPLCHC
Trigger: ACAATGACACAGAGGCCACCATGGCTGACGGTGGGG...GAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp CCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTCTCTGTCCAGCCACACTaGCGTAGCCACTCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: PQEIIQGQVTIRLPSPSLSVQPH*RSHSPR
Trigger: GCGAGGAGAGTGGCTACGCCAGTGTGGCTGGACAGA...GAGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp CCACTGGGACCTTTCTCCAGAGTGTTTCCGGCTGAACTAAAGCTGGGCACTGATCACACACAAAGGCTTTaGCACCCGCTGAATGAGCCA +
Preference number: 4 (lower is better)
Translates to: PLGPFSRVFPAELKLGTDHTQRL*HPLNEP
Trigger: TGGCTCATTCAGCGGGTGCCAAAGCCTTTGTGTGTG...ATCAGTGCCCAGCTTTAGTTCAGCCGGAAACACTCTGGAGAAAGGTCCCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CCA 90 bp GGCAGTGGTTTGATAGCCAGATCACCTGGAGCCCCAGGAAATAATCCAAGGCCACACACACAAAGGCTTTaGCACCCGCTGAATGAGCCA +
Preference number: 4 (lower is better)
Translates to: GSGLIARSPGAPGNNPRPHTQRL*HPLNEP
Trigger: TGGCTCATTCAGCGGGTGCCAAAGCCTTTGTGTGTG...TGGCCTTGGATTATTTCCTGGGGCTCCAGGTGATCTGGCTATCAAACCACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp GGCCTCCACTCAGATCCTGAATGGTCCACTTTTTCCTACAGCTTCCAGCCAGAGATCTCCTCCGGCTTGTaGCCCTTCATGTGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: GLHSDPEWSTFSYSFQPEISSGL*PFMCFC
Trigger: GCAGAAACACATGAAGGGCCACAAGCCGGAGGAGAT...CTCTGGCTGGAAGCTGTAGGAAAAAGTGGACCATTCAGGATCTGAGTGGAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR TCA 90 bp CCACTGGGACCTTTCTCCAGAGTGTTTCCGGCTGAACTAAAGCTGGGCACTGATAACTGGGCACCGCATTaGTCACACACAAAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: PLGPFSRVFPAELKLGTDNWAPH*SHTKAL
Trigger: CAAAGCCTTTGTGTGTGATCAATGCGGTGCCCAGTT...ATCAGTGCCCAGCTTTAGTTCAGCCGGAAACACTCTGGAGAAAGGTCCCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR GCA 90 bp TCTTTTCTCCGTAGTCTTTCCACTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTGGGTGGCTAGGGTTCTaGAGCTGGATCATCCCCATC +
Preference number: 4 (lower is better)
Translates to: SFLRSLSTLSGSSSPLLAGWLGF*SWIIPI
Trigger: GATGGGGATGATCCAGCTGCAGAACCCTAGCCACCC...AGCCAGCAAAGGCGAGCTAGAACCAGACAAAGTGGAAAGACTACGGAGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp GGCCTCCACTCAGATCCTGAATGGTCCACTTTTTCCTACAGCTTCCAGCCAGAGGTTTTCATCCCACTGTaGAGTTTCCTGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GLHSDPEWSTFSYSFQPEVFIPL*SFLCCS
Trigger: GGAGCAGCACAGGAAACTGCACAGTGGGATGAAAAC...CTCTGGCTGGAAGCTGTAGGAAAAAGTGGACCATTCAGGATCTGAGTGGAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR GCA 90 bp GAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTTGGACCTCCATGTGCTaGTGGAGTGCGCTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: EPQEIIQGQVTIRLPSPSWTSMC*WSALCA
Trigger: GGCACAAAGCGCACTCCAGCAGCACATGGAGGTCCA...AGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp TCTTTTCTCCGTAGTCTTTCCACTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTGCGTGGACCTCCATGTaGTGCTGGAGTGCGCTTTGT +
Preference number: 4 (lower is better)
Translates to: SFLRSLSTLSGSSSPLLAAWTSM*CWSALC
Trigger: ACAAAGCGCACTCCAGCAGCACATGGAGGTCCACGC...AGCCAGCAAAGGCGAGCTAGAACCAGACAAAGTGGAAAGACTACGGAGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp TACAGTTTGAAAAGATCAGCTCAGCCCTCTCCAGCTTTTATGGTTGGGCGGGGGTGCGGTTGCACTCACTaGAAATATAGCTGCGCACGC +
Preference number: 4 (lower is better)
Translates to: YSLKRSAQPSPAFMVGRGCGCTH*KYSCAR
Trigger: GCGTGCGCAGCTATATTTGCAGTGAGTGCAACCGCA...CCCCCGCCCAACCATAAAAGCTGGAGAGGGCTGAGCTGATCTTTTCAAACTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CCA 90 bp AATGACACCCTCCCAGTTCCTCTAATATCTCTCACAACCAAAAGGGTGGGGAAGCCTTGGCTTGCAGTGTaGCCGTGTAGGCGTACTCCA +
Preference number: 4 (lower is better)
Translates to: NDTLPVPLISLTTKRVGKPWLAV*PCRRTP
Trigger: TGGAGTACGCCTACACGGCCACACTGCAAGCCAAGG...CTTCCCCACCCTTTTGGTTGTGAGAGATATTAGAGGAACTGGGAGGGTGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CCA 90 bp CCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTCCCTTGGCTTGCAGTGTaGCCGTGTAGGCGTACTCCA +
Preference number: 4 (lower is better)
Translates to: PQEIIQGQVTIRLPSPSLPWLAV*PCRRTP
Trigger: TGGAGTACGCCTACACGGCCACACTGCAAGCCAAGG...GAGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp CTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTCCTGCCACTGCTCTACCATGTGTTGTCATCAGATGCCTaGATGGTCTCCAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: LCLVLARLCWLLPLLYHVLSSDA*MVSRIF
Trigger: GAAGATCCTGGAGACCATCCAGGCATCTGATGACAA...CACATGGTAGAGCAGTGGCAGGAGCCAGCAAAGGCGAGCTAGAACCAGACAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp TCTTTTCTCCGTAGTCTTTCCACTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTCTCAGGCCCTGCAGGTaGCTGAAGAGTTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: SFLRSLSTLSGSSSPLLALRPCR*LKSSLQ
Trigger: CTGCAAGGAACTCTTCAGCCACCTGCAGGGCCTGAG...AGCCAGCAAAGGCGAGCTAGAACCAGACAAAGTGGAAAGACTACGGAGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp GAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTGTATGTGAGCGAAGGTaGCGCTTGAGAGCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: EPQEIIQGQVTIRLPSPSVCERR*RLRAVW
Trigger: CCACACGGCTCTCAAGCGCCACCTTCGCTCACATAC...AGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp CCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTCCAAACATCTTGCTGGTaGAGGCTAGCACCGTCCGGT +
Preference number: 4 (lower is better)
Translates to: PQEIIQGQVTIRLPSPSLQTSCW*RLAPSG
Trigger: ACCGGACGGTGCTAGCCTGCACCAGCAAGATGTTTG...GAGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp GGCAGTGGTTTGATAGCCAGATCACCTGGAGCCCCAGGAAATAATCCAAGGCCAGTCATTGTCATCAGATaGCTGGATGGTCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: GSGLIARSPGAPGNNPRPVIVIR*LDGLQD
Trigger: ATCCTGGAGACCATCCAGGCATCTGATGACAATGAC...TGGCCTTGGATTATTTCCTGGGGCTCCAGGTGATCTGGCTATCAAACCACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp GGCAGTGGTTTGATAGCCAGATCACCTGGAGCCCCAGGAAATAATCCAAGGCCAGGGGCTTCATCTACCTaGATCATTTCCATCTTCACC +
Preference number: 4 (lower is better)
Translates to: GSGLIARSPGAPGNNPRPGASST*IISIFT
Trigger: GGTGAAGATGGAAATGATGCAGGTAGATGAAGCCCC...TGGCCTTGGATTATTTCCTGGGGCTCCAGGTGATCTGGCTATCAAACCACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp TCTTTTCTCCGTAGTCTTTCCACTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTGAAGTCCATGGAGACTaGCAGGGCAGGTTGCACATG +
Preference number: 4 (lower is better)
Translates to: SFLRSLSTLSGSSSPLLAEVHGD*QGRLHM
Trigger: CATGTGCAACCTGCCCTGGCAGTCTCCATGGACTTC...AGCCAGCAAAGGCGAGCTAGAACCAGACAAAGTGGAAAGACTACGGAGAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp AATGACACCCTCCCAGTTCCTCTAATATCTCTCACAACCAAAAGGGTGGGGAAGTGCAGTTTCCTGTGCTaGTCCACTGCCTCGTTGTCC +
Preference number: 4 (lower is better)
Translates to: NDTLPVPLISLTTKRVGKCSFLC*STASLS
Trigger: GGACAACGAGGCAGTGGAGCAGCACAGGAAACTGCA...CTTCCCCACCCTTTTGGTTGTGAGAGATATTAGAGGAACTGGGAGGGTGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR GCA 90 bp GCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTTGCAGTTTCCTGTGCTaGTCCACTGCCTCGTTGTCC +
Preference number: 4 (lower is better)
Translates to: APGNNPRPSNYQASFSFSCSFLC*STASLS
Trigger: GGACAACGAGGCAGTGGAGCAGCACAGGAAACTGCA...AGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp GGAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCCTGGAGTGCGCTTTGTaGCTGAAAGCGTTTCCCACA +
Preference number: 4 (lower is better)
Translates to: GAPGNNPRPSNYQASFSFLECAL*LKAFPT
Trigger: TGTGGGAAACGCTTTCAGGCACAAAGCGCACTCCAG...GAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp AATGACACCCTCCCAGTTCCTCTAATATCTCTCACAACCAAAAGGGTGGGGAAGTGTGGCTGGGGAAGGTaGGGTTGCACTCACTGCAAA +
Preference number: 4 (lower is better)
Translates to: NDTLPVPLISLTTKRVGKCGWGR*GCTHCK
Trigger: TTTGCAGTGAGTGCAACCGCACCTTCCCCAGCCACA...CTTCCCCACCCTTTTGGTTGTGAGAGATATTAGAGGAACTGGGAGGGTGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR GCA 90 bp GAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTTGTGGCTGGGGAAGGTaGGGTTGCACTCACTGCAAA +
Preference number: 4 (lower is better)
Translates to: EPQEIIQGQVTIRLPSPSCGWGR*GCTHCK
Trigger: TTTGCAGTGAGTGCAACCGCACCTTCCCCAGCCACA...AGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp GCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTCATCCCGGAAGCAGCTaGCGCAGAACTCACACTCAT +
Preference number: 4 (lower is better)
Translates to: APGNNPRPSNYQASFSFSHPGSS*RRTHTH
Trigger: ATGAGTGTGAGTTCTGCGGCAGCTGCTTCCGGGATG...AGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp TCTTTTCTCCGTAGTCTTTCCACTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTTGGGCATGGAACTCCTaGCTGTCCACCATGATGACC +
Preference number: 4 (lower is better)
Translates to: SFLRSLSTLSGSSSPLLAWAWNS*LSTMMT
Trigger: GGTCATCATGGTGGACAGCCAGGAGTTCCATGCCCA...AGCCAGCAAAGGCGAGCTAGAACCAGACAAAGTGGAAAGACTACGGAGAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp GGAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCCACCGTCAGCCATGGTaGCCTCTGTGTCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: GAPGNNPRPSNYQASFSFHRQPW*PLCHCH
Trigger: ATGACAATGACACAGAGGCCACCATGGCTGACGGTG...GAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp TCTTTTCTCCGTAGTCTTTCCACTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTAGAGACCGAAAGAGGTaGAGACTGAGGGGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: SFLRSLSTLSGSSSPLLARDRKR*RLRGSG
Trigger: ACCAGAGCCCCTCAGTCTCCACCTCTTTCGGTCTCT...AGCCAGCAAAGGCGAGCTAGAACCAGACAAAGTGGAAAGACTACGGAGAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp TCTTTTCTCCGTAGTCTTTCCACTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTGTGCAGATGGTACACTaGTATGGCGAGGCACCGTTG +
Preference number: 4 (lower is better)
Translates to: SFLRSLSTLSGSSSPLLAVQMVH*YGEAPL
Trigger: CAACGGTGCCTCGCCATACCAGTGTACCATCTGCAC...AGCCAGCAAAGGCGAGCTAGAACCAGACAAAGTGGAAAGACTACGGAGAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp GAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTGTGCAGATGGTACACTaGTATGGCGAGGCACCGTTG +
Preference number: 4 (lower is better)
Translates to: EPQEIIQGQVTIRLPSPSVQMVH*YGEAPL
Trigger: CAACGGTGCCTCGCCATACCAGTGTACCATCTGCAC...AGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp GGAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCATCTCCTCCGGCTTGTaGCCCTTCATGTGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: GAPGNNPRPSNYQASFSFISSGL*PFMCFC
Trigger: GCAGAAACACATGAAGGGCCACAAGCCGGAGGAGAT...GAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp GCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTTATCCTCCAGTCAGGTaGGATCTCCTCCGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: APGNNPRPSNYQASFSFSYPPVR*DLLRLV
Trigger: CACAAGCCGGAGGAGATCCCACCTGACTGGAGGATA...AGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp TCTTTTCTCCGTAGTCTTTCCACTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTTATCCTCCAGTCAGGTaGGATCTCCTCCGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: SFLRSLSTLSGSSSPLLAYPPVR*DLLRLV
Trigger: CACAAGCCGGAGGAGATCCCACCTGACTGGAGGATA...AGCCAGCAAAGGCGAGCTAGAACCAGACAAAGTGGAAAGACTACGGAGAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp TTGGGAGGCAAGGGACCAGCCAGTTCTATGGAGGAGTCGAAAGGTTTTCTCTTTAGGATCTTCAGGCACTaGTCCTCCAGGTATTCGATC +
Preference number: 4 (lower is better)
Translates to: LGGKGPASSMEESKGFLFRIFRH*SSRYSI
Trigger: GATCGAATACCTGGAGGAGCAGTGCCTGAAGATCCT...AAAGAGAAAACCTTTCGACTCCTCCATAGAACTGGCTGGTCCCTTGCCTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR GCA 90 bp TCTTTTCTCCGTAGTCTTTCCACTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTTCCCAGGCCCCTCTTTaGTCCTCTCTTCAAGCTTGT +
Preference number: 4 (lower is better)
Translates to: SFLRSLSTLSGSSSPLLASQAPL*SSLQAC
Trigger: ACAAGCTTGAAGAGAGGAGCAAAGAGGGGCCTGGGA...AGCCAGCAAAGGCGAGCTAGAACCAGACAAAGTGGAAAGACTACGGAGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp GAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTTCACTGAAGACGGCATaGTCAACACAGCATCGGCCT +
Preference number: 4 (lower is better)
Translates to: EPQEIIQGQVTIRLPSPSSLKTA*STQHRP
Trigger: AGGCCGATGCTGTGTTGAGCATGCCGTCTTCAGTGA...AGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp GAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTGGAGTGCGCTTTGTaGCTGAAAGCGTTTCCCACA +
Preference number: 4 (lower is better)
Translates to: EPQEIIQGQVTIRLPSPSLECAL*LKAFPT
Trigger: TGTGGGAAACGCTTTCAGGCACAAAGCGCACTCCAG...AGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp TCTTTTCTCCGTAGTCTTTCCACTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTTGCGGTTGCACTCACTaGAAATATAGCTGCGCACGC +
Preference number: 4 (lower is better)
Translates to: SFLRSLSTLSGSSSPLLACGCTH*KYSCAR
Trigger: GCGTGCGCAGCTATATTTGCAGTGAGTGCAACCGCA...AGCCAGCAAAGGCGAGCTAGAACCAGACAAAGTGGAAAGACTACGGAGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp AATGACACCCTCCCAGTTCCTCTAATATCTCTCACAACCAAAAGGGTGGGGAAGTCTCAAACATCTTGCTaGTGCAGGCTAGCACCGTCC +
Preference number: 4 (lower is better)
Translates to: NDTLPVPLISLTTKRVGKSQTSC*CRLAPS
Trigger: GGACGGTGCTAGCCTGCACCAGCAAGATGTTTGAGA...CTTCCCCACCCTTTTGGTTGTGAGAGATATTAGAGGAACTGGGAGGGTGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CCA 90 bp GCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTTCTCAAACATCTTGCTaGTGCAGGCTAGCACCGTCC +
Preference number: 4 (lower is better)
Translates to: APGNNPRPSNYQASFSFSSQTSC*CRLAPS
Trigger: GGACGGTGCTAGCCTGCACCAGCAAGATGTTTGAGA...AGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp GAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCATCAGATGCCTGGATaGTCTCCAGGATCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: EPQEIIQGQVTIRLPSPSHQMPG*SPGSSG
Trigger: GCCTGAAGATCCTGGAGACCATCCAGGCATCTGATG...AGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp TCTTTTCTCCGTAGTCTTTCCACTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTCATCAGATGCCTGGATaGTCTCCAGGATCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: SFLRSLSTLSGSSSPLLAHQMPG*SPGSSG
Trigger: GCCTGAAGATCCTGGAGACCATCCAGGCATCTGATG...AGCCAGCAAAGGCGAGCTAGAACCAGACAAAGTGGAAAGACTACGGAGAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp AATGACACCCTCCCAGTTCCTCTAATATCTCTCACAACCAAAAGGGTGGGGAAGCACCGTCAGCCATGGTaGCCTCTGTGTCATTGTCAT +
Preference number: 4 (lower is better)
Translates to: NDTLPVPLISLTTKRVGKHRQPW*PLCHCH
Trigger: ATGACAATGACACAGAGGCCACCATGGCTGACGGTG...CTTCCCCACCCTTTTGGTTGTGAGAGATATTAGAGGAACTGGGAGGGTGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CCA 90 bp GAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTTCATGTGTTTCTGCATaGAGGAGAGGCTGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: EPQEIIQGQVTIRLPSPSSCVSA*RRGWGS
Trigger: ACTGCCCCAGCCTCTCCTCCATGCAGAAACACATGA...AGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR TCA 90 bp TCTTTTCTCCGTAGTCTTTCCACTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTAACTGGGCACCGCATTaGTCACACACAAAGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SFLRSLSTLSGSSSPLLANWAPH*SHTKAL
Trigger: CAAAGCCTTTGTGTGTGATCAATGCGGTGCCCAGTT...AGCCAGCAAAGGCGAGCTAGAACCAGACAAAGTGGAAAGACTACGGAGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp CCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTCAGGATCTTCAGGCACTaGTCCTCCAGGTATTCGATC +
Preference number: 4 (lower is better)
Translates to: PQEIIQGQVTIRLPSPSLRIFRH*SSRYSI
Trigger: GATCGAATACCTGGAGGAGCAGTGCCTGAAGATCCT...GAGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp GCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTTGGGGAAGGTGCGGTTaGACTCACTGCAAATATAGC +
Preference number: 4 (lower is better)
Translates to: APGNNPRPSNYQASFSFSWGRCG*THCKYS
Trigger: GCTATATTTGCAGTGAGTGCAACCGCACCTTCCCCA...AGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp TCTTTTCTCCGTAGTCTTTCCACTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTTGCGTCTCCAACTGGTaGTTGAGGCTGAACTTCTTG +
Preference number: 4 (lower is better)
Translates to: SFLRSLSTLSGSSSPLLACVSNW*LRLNFL
Trigger: CAAGAAGTTCAGCCTCAAGCACCAGTTGGAGACGCA...AGCCAGCAAAGGCGAGCTAGAACCAGACAAAGTGGAAAGACTACGGAGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp GAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTTGCGTCTCCAACTGGTaGTTGAGGCTGAACTTCTTG +
Preference number: 4 (lower is better)
Translates to: EPQEIIQGQVTIRLPSPSCVSNW*LRLNFL
Trigger: CAAGAAGTTCAGCCTCAAGCACCAGTTGGAGACGCA...AGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp CCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTCCTAGGGTTCTGCAGCTaGATCATCCCCATCTTTGTC +
Preference number: 4 (lower is better)
Translates to: PQEIIQGQVTIRLPSPSLLGFCS*IIPIFV
Trigger: GACAAAGATGGGGATGATCCAGCTGCAGAACCCTAG...GAGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp AATGACACCCTCCCAGTTCCTCTAATATCTCTCACAACCAAAAGGGTGGGGAAGTACTCCAGGATCTGCTaGAAGGTTTTTGGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: NDTLPVPLISLTTKRVGKYSRIC*KVFGER
Trigger: CCTCTCGCCAAAAACCTTCCAGCAGATCCTGGAGTA...CTTCCCCACCCTTTTGGTTGTGAGAGATATTAGAGGAACTGGGAGGGTGTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CCA 90 bp GAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTTACTCCAGGATCTGCTaGAAGGTTTTTGGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: EPQEIIQGQVTIRLPSPSYSRIC*KVFGER
Trigger: CCTCTCGCCAAAAACCTTCCAGCAGATCCTGGAGTA...AGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp AATGACACCCTCCCAGTTCCTCTAATATCTCTCACAACCAAAAGGGTGGGGAAGGTCATTGTCATCAGATaGCTGGATGGTCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: NDTLPVPLISLTTKRVGKVIVIR*LDGLQD
Trigger: ATCCTGGAGACCATCCAGGCATCTGATGACAATGAC...CTTCCCCACCCTTTTGGTTGTGAGAGATATTAGAGGAACTGGGAGGGTGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CCA 90 bp GCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTTGCTGGCTGTTTCGGTaGAAGAGGATCTCAAACATC +
Preference number: 4 (lower is better)
Translates to: APGNNPRPSNYQASFSFSCWLFR*KRISNI
Trigger: GATGTTTGAGATCCTCTTCCACCGAAACAGCCAGCA...AGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CCA 90 bp TCTTTTCTCCGTAGTCTTTCCACTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTTTGTCATCAGATGCCTaGATGGTCTCCAGGATCTTC +
Preference number: 4 (lower is better)
Translates to: SFLRSLSTLSGSSSPLLALSSDA*MVSRIF
Trigger: GAAGATCCTGGAGACCATCCAGGCATCTGATGACAA...AGCCAGCAAAGGCGAGCTAGAACCAGACAAAGTGGAAAGACTACGGAGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR GCA 90 bp GAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTCTCCTCGCTGGAATaGTTCGAGATAAAGATGTTC +
Preference number: 4 (lower is better)
Translates to: EPQEIIQGQVTIRLPSPSLSSLE*FEIKMF
Trigger: GAACATCTTTATCTCGAAGCATTCCAGCGAGGAGAG...AGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
3UTR CAA 72 bp CAGCCAGTTCTATGGAGGAGTCGAAAGGTTTTCTCTTaGTCACCGATCTTGAATGACATCTTCCTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: QPVLWRSRKVFS*SPILNDIFLLK
Trigger: TTTTAACAGGAAGATGTCATTCAAGATCGGTGACAAAGAGAAAACCTTTCGACTCCTCCATAGAACTGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS GCA 90 bp TCCACTGCCTCGTTGTCCGGAAGCTCGACCCCACACACGCTGCACTaGTCCCCCAGAGGGCGGCTCTCAGCCTTCATGCCCACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: STASLSGSSTPHTLH*SPRGRLSAFMPTAS
Trigger: GCTGGCTGTGGGCATGAAGGCTGAGAGCCGCCCTCTGGGGGAGCAGTGCAGCGTGTGTGGGGTCGAGCTTCCGGACAACGAGGCAGTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS GCA 90 bp GCTGCTCCACTGCCTCGTTGTCCGGAAGCTCGACCCCACACACGCTaGACTGCTCCCCCAGAGGGCGGCTCTCAGCCTTCATGCCCACAG +
Preference number: 5 (lower is better)
Translates to: AAPLPRCPEARPHTR*TAPPEGGSQPSCPQ
Trigger: CTGTGGGCATGAAGGCTGAGAGCCGCCCTCTGGGGGAGCAGTGCAGCGTGTGTGGGGTCGAGCTTCCGGACAACGAGGCAGTGGAGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CAA 90 bp GAAAGCCTCTCCCGCCATGACGCCAGAGCTGCCACTCTGAGCATCAGCTGGGGAGAGCGAAGGTGGCGCTaGAGAGCCGTGTGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: ESLSRHDARAATLSISWGERRWR*RAVWLG
Trigger: CCCCAGCCACACGGCTCTCAAGCGCCACCTTCGCTC...TCCCCAGCTGATGCTCAGAGTGGCAGCTCTGGCGTCATGGCGGGAGAGGCTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CAA 90 bp GAAAGCCTCTCCCGCCATGACGCCAGAGCTGCCACTCTGAGCATCAGCTGGGGAGTCCTCCGCCTTGGCTaGCAGTGTGGCCGTGTAGGC +
Preference number: 5 (lower is better)
Translates to: ESLSRHDARAATLSISWGVLRLG*QCGRVG
Trigger: GCCTACACGGCCACACTGCAAGCCAAGGCGGAGGAC...TCCCCAGCTGATGCTCAGAGTGGCAGCTCTGGCGTCATGGCGGGAGAGGCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS CCA 90 bp CTGAGAGACCGAAAGAGGTGGAGACTGAGGGGCTCTGGTCCACCATaGGCCCAGGGAGGCTCTGTCCAGCCACACTGGCGTAGCCACTCT +
Preference number: 5 (lower is better)
Translates to: LRDRKRWRLRGSGPP*AQGGSVQPHWRSHS
Trigger: AGAGTGGCTACGCCAGTGTGGCTGGACAGAGCCTCCCTGGGCCCATGGTGGACCAGAGCCCCTCAGTCTCCACCTCTTTCGGTCTCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CAA 90 bp CCACTCCCACCTCCACCACGTAAAGCTCACCTGAGAGGGGGCATTCACTCCCCATCCAGGTCCTCCGCCTaGGCTTGCAGTGTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: PLPPPPRKAHLRGGIHSPSRSSA*ACSVAV
Trigger: CACGGCCACACTGCAAGCCAAGGCGGAGGACCTGGA...TGGGGAGTGAATGCCCCCTCTCAGGTGAGCTTTACGTGGTGGAGGTGGGAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS GCA 90 bp CCGTGTGGCTGGGGAAGGTGCGGTTGCACTCACTGCAAATATAGCTaGGCACGCCTGCGTGGACCTCCATGTGCTGCTGGAGTGCGCTTT +
Preference number: 5 (lower is better)
Translates to: PCGWGRCGCTHCKYS*ARLRGPPCAAGVRF
Trigger: AAAGCGCACTCCAGCAGCACATGGAGGTCCACGCAGGCGTGCGCAGCTATATTTGCAGTGAGTGCAACCGCACCTTCCCCAGCCACACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS TCA 90 bp TCCACCATGATGACCACATCGCACAAAGTCCCAGCCAGTCGCATCTaGTTGGCCTTGCACAGCAGCCCCGTGGGGTGGCTAGGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: STMMTTSHKVPASRI*LALHSSPVGWLGFC
Trigger: GCAGAACCCTAGCCACCCCACGGGGCTGCTGTGCAAGGCCAATCAGATGCGACTGGCTGGGACTTTGTGCGATGTGGTCATCATGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS TCA 90 bp CATGGAGACTGCCAGGGCAGGTTGCACATGGAGACCGGACGTCACTaGAGACGGCATGCTCAACACAGCATCGGCCTTGTGGTTGGGCAG +
Preference number: 5 (lower is better)
Translates to: HGDCQGRLHMETGRH*RRHAQHSIGLVVGQ
Trigger: CTGCCCAACCACAAGGCCGATGCTGTGTTGAGCATGCCGTCTTCAGTGACGTCCGGTCTCCATGTGCAACCTGCCCTGGCAGTCTCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS GCA 90 bp CCAGGGCAGGTTGCACATGGAGACCGGACGTCACTGAAGACGGCATaGTCAACACAGCATCGGCCTTGTGGTTGGGCAGCACCGAGTAGA +
Preference number: 5 (lower is better)
Translates to: PGQVAHGDRTSLKTA*STQHRPCGWAAPSR
Trigger: TCTACTCGGTGCTGCCCAACCACAAGGCCGATGCTGTGTTGAGCATGCCGTCTTCAGTGACGTCCGGTCTCCATGTGCAACCTGCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS GCA 90 bp GCGCACGCCTGCGTGGACCTCCATGTGCTGCTGGAGTGCGCTTTGTaGCTGAAAGCGTTTCCCACACAGCAGACAGAAGACAGCCATGTC +
Preference number: 5 (lower is better)
Translates to: AHACVDLHVLLECAL*LKAFPTQQTEDSHV
Trigger: GACATGGCTGTCTTCTGTCTGCTGTGTGGGAAACGCTTTCAGGCACAAAGCGCACTCCAGCAGCACATGGAGGTCCACGCAGGCGTGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CAA 90 bp CTTTGTCTGGTTCTAGCTCGCCTTTGCTGGCTCCTGCCACTGCTCTACCATGTGTCCAGGTCCTCCGCCTaGGCTTGCAGTGTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: LCLVLARLCWLLPLLYHVSRSSA*ACSVAV
Trigger: CACGGCCACACTGCAAGCCAAGGCGGAGGACCTGGA...CACATGGTAGAGCAGTGGCAGGAGCCAGCAAAGGCGAGCTAGAACCAGACAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CAA 90 bp GCGTGGCTACAGCAGCGGCCACCCCTCGGACTTTCTGTTCCTTTTCATGGCCCTCCAGGGCATCCTCCTTaGAGAACTGGGCACCGCATT +
Preference number: 5 (lower is better)
Translates to: AWLQQRPPLGLSVPFHGPPGHPP*RTGHRI
Trigger: AATGCGGTGCCCAGTTCTCAAAGGAGGATGCCCTGG...AGGGCCATGAAAAGGAACAGAAAGTCCGAGGGGTGGCCGCTGCTGTAGCCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS TCA 90 bp ACGCCTGCGTGGACCTCCATGTGCTGCTGGAGTGCGCTTTGTGCCTaGAAGCGTTTCCCACACAGCAGACAGAAGACAGCCATGTCCGTG +
Preference number: 5 (lower is better)
Translates to: TPAWTSMCCWSALCA*KRFPHSRQKTAMSV
Trigger: CACGGACATGGCTGTCTTCTGTCTGCTGTGTGGGAAACGCTTTCAGGCACAAAGCGCACTCCAGCAGCACATGGAGGTCCACGCAGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS GCA 90 bp GCCCCCACCGTCAGCCATGGTGGCCTCTGTGTCATTGTCATCAGATaGCTGGATGGTCTCCAGGATCTTCAGGCACTGCTCCTCCAGGTA +
Preference number: 5 (lower is better)
Translates to: APTVSHGGLCVIVIR*LDGLQDLQALLLQV
Trigger: TACCTGGAGGAGCAGTGCCTGAAGATCCTGGAGACCATCCAGGCATCTGATGACAATGACACAGAGGCCACCATGGCTGACGGTGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS GCA 90 bp GGGGAAGGTGCGGTTGCACTCACTGCAAATATAGCTGCGCACGCCTaGGTGGACCTCCATGTGCTGCTGGAGTGCGCTTTGTGCCTGAAA +
Preference number: 5 (lower is better)
Translates to: GEGAVALTANIAAHA*VDLHVLLECALCLK
Trigger: TTTCAGGCACAAAGCGCACTCCAGCAGCACATGGAGGTCCACGCAGGCGTGCGCAGCTATATTTGCAGTGAGTGCAACCGCACCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 90 bp ATCTTGCTGGTGCAGGCTAGCACCGTCCGGTGGGCATGGAACTCCTaGCTGTCCACCATGATGACCACATCGCACAAAGTCCCAGCCAGT +
Preference number: 5 (lower is better)
Translates to: ILLVQASTVRWAWNS*LSTMMTTSHKVPAS
Trigger: ACTGGCTGGGACTTTGTGCGATGTGGTCATCATGGTGGACAGCCAGGAGTTCCATGCCCACCGGACGGTGCTAGCCTGCACCAGCAAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 90 bp CCTCCGGCTTGTGGCCCTTCATGTGTTTCTGCATGGAGGAGAGGCTaGGGCAGTATTCCGTGCAGATGGTACACTGGTATGGCGAGGCAC +
Preference number: 5 (lower is better)
Translates to: PPACGPSCVSAWRRG*GSIPCRWYTGMARH
Trigger: GTGCCTCGCCATACCAGTGTACCATCTGCACGGAATACTGCCCCAGCCTCTCCTCCATGCAGAAACACATGAAGGGCCACAAGCCGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS TCA 90 bp CACACTCATATGGGTGGTCACCTGTATGTGAGCGAAGGTGGCGCTTaGGAGCCGTGTGGCTGGGGAAGGTGCGGTTGCACTCACTGCAAA +
Preference number: 5 (lower is better)
Translates to: HTHMGGHLYVSEGGA*EPCGWGRCGCTHCK
Trigger: TTTGCAGTGAGTGCAACCGCACCTTCCCCAGCCACACGGCTCTCAAGCGCCACCTTCGCTCACATACAGGTGACCACCCATATGAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS GCA 90 bp AGTGCTGGCTGTTTCGGTGGAAGAGGATCTCAAACATCTTGCTGGTaGAGGCTAGCACCGTCCGGTGGGCATGGAACTCCTGGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: SAGCFGGRGSQTSCW*RLAPSGGHGTPGCP
Trigger: TGGACAGCCAGGAGTTCCATGCCCACCGGACGGTGCTAGCCTGCACCAGCAAGATGTTTGAGATCCTCTTCCACCGAAACAGCCAGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS GCA 90 bp CAGTCAGGTGGGATCTCCTCCGGCTTGTGGCCCTTCATGTGTTTCTaGATGGAGGAGAGGCTGGGGCAGTATTCCGTGCAGATGGTACAC +
Preference number: 5 (lower is better)
Translates to: QSGGISSGLWPFMCF*MEERLGQYSVQMVH
Trigger: GTGTACCATCTGCACGGAATACTGCCCCAGCCTCTCCTCCATGCAGAAACACATGAAGGGCCACAAGCCGGAGGAGATCCCACCTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 90 bp GAGCCTTACGGTCCTCTTCTTCTTCGCCCCCACCGTCAGCCATGGTaGCCTCTGTGTCATTGTCATCAGATGCCTGGATGGTCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: EPYGPLLLRPHRQPW*PLCHCHQMPGWSPG
Trigger: TCCTGGAGACCATCCAGGCATCTGATGACAATGACACAGAGGCCACCATGGCTGACGGTGGGGGCGAAGAAGAAGAGGACCGTAAGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 90 bp GGAGGAGAGGCTGGGGCAGTATTCCGTGCAGATGGTACACTGGTATaGCGAGGCACCGTTGTGTGTTCTCAGGTGCTTGATCATGGCCGA +
Preference number: 5 (lower is better)
Translates to: GGEAGAVFRADGTLV*RGTVVCSQVLDHGR
Trigger: TCGGCCATGATCAAGCACCTGAGAACACACAACGGTGCCTCGCCATACCAGTGTACCATCTGCACGGAATACTGCCCCAGCCTCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS GCA 90 bp GAGTATAGTGCTGGCTGTTTCGGTGGAAGAGGATCTCAAACATCTTaGTGGTGCAGGCTAGCACCGTCCGGTGGGCATGGAACTCCTGGC +
Preference number: 5 (lower is better)
Translates to: EYSAGCFGGRGSQTS*WCRLAPSGGHGTPG
Trigger: GCCAGGAGTTCCATGCCCACCGGACGGTGCTAGCCTGCACCAGCAAGATGTTTGAGATCCTCTTCCACCGAAACAGCCAGCACTATACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 90 bp AAGAGGATCTCAAACATCTTGCTGGTGCAGGCTAGCACCGTCCGGTaGGCATGGAACTCCTGGCTGTCCACCATGATGACCACATCGCAC +
Preference number: 5 (lower is better)
Translates to: KRISNILLVQASTVR*AWNSWLSTMMTTSH
Trigger: GTGCGATGTGGTCATCATGGTGGACAGCCAGGAGTTCCATGCCCACCGGACGGTGCTAGCCTGCACCAGCAAGATGTTTGAGATCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 90 bp CTAAAATCTCAGCTGCATACAGCAGGTCATCCAGGTCCTCCGCCTTaGCTTGCAGTGTGGCCGTGTAGGCGTACTCCAGGATCTGCTGGA +
Preference number: 5 (lower is better)
Translates to: LKSQLHTAGHPGPPP*LAVWPCRRTPGSAG
Trigger: TCCAGCAGATCCTGGAGTACGCCTACACGGCCACACTGCAAGCCAAGGCGGAGGACCTGGATGACCTGCTGTATGCAGCTGAGATTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 90 bp CCACCGTCAGCCATGGTGGCCTCTGTGTCATTGTCATCAGATGCCTaGATGGTCTCCAGGATCTTCAGGCACTGCTCCTCCAGGTATTCG +
Preference number: 5 (lower is better)
Translates to: PPSAMVASVSLSSDA*MVSRIFRHCSSRYS
Trigger: CGAATACCTGGAGGAGCAGTGCCTGAAGATCCTGGAGACCATCCAGGCATCTGATGACAATGACACAGAGGCCACCATGGCTGACGGTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 90 bp ACGTCACTGAAGACGGCATGCTCAACACAGCATCGGCCTTGTGGTTaGGCAGCACCGAGTAGATACCCAAATGCTTCTCCACTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: TSLKTACSTQHRPCG*AAPSRYPNASPLGV
Trigger: CACCCCCAGTGGAGAAGCATTTGGGTATCTACTCGGTGCTGCCCAACCACAAGGCCGATGCTGTGTTGAGCATGCCGTCTTCAGTGACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CAA 90 bp CCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTCGAGCGAAGGTGGCGCTaGAGAGCCGTGTGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: PQEIIQGQVTIRLPSPSLERRWR*RAVWLG
Trigger: CCCCAGCCACACGGCTCTCAAGCGCCACCTTCGCTC...GAGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CAA 90 bp CAGCTCAGCAGGACTCTTGCTCATGAGGGAGTTTGGGTGGGGTACAATGCCTGCTATGGCGAGGCACCGTaGTGTGTTCTCAGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: QLSRTLAHEGVWVGYNACYGEAP*CVLRCL
Trigger: CAAGCACCTGAGAACACACAACGGTGCCTCGCCATA...GCAGGCATTGTACCCCACCCAAACTCCCTCATGAGCAAGAGTCCTGCTGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS CCA 90 bp ATCTCAAACATCTTGCTGGTGCAGGCTAGCACCGTCCGGTGGGCATaGAACTCCTGGCTGTCCACCATGATGACCACATCGCACAAAGTC +
Preference number: 5 (lower is better)
Translates to: ISNILLVQASTVRWA*NSWLSTMMTTSHKV
Trigger: GACTTTGTGCGATGTGGTCATCATGGTGGACAGCCAGGAGTTCCATGCCCACCGGACGGTGCTAGCCTGCACCAGCAAGATGTTTGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 90 bp TATAGTGCTGGCTGTTTCGGTGGAAGAGGATCTCAAACATCTTGCTaGTGCAGGCTAGCACCGTCCGGTGGGCATGGAACTCCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: YSAGCFGGRGSQTSC*CRLAPSGGHGTPGC
Trigger: ACAGCCAGGAGTTCCATGCCCACCGGACGGTGCTAGCCTGCACCAGCAAGATGTTTGAGATCCTCTTCCACCGAAACAGCCAGCACTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 90 bp TGCATGGAGGAGAGGCTGGGGCAGTATTCCGTGCAGATGGTACACTaGTATGGCGAGGCACCGTTGTGTGTTCTCAGGTGCTTGATCATG +
Preference number: 5 (lower is better)
Translates to: CMEERLGQYSVQMVH*YGEAPLCVLRCLIM
Trigger: CATGATCAAGCACCTGAGAACACACAACGGTGCCTCGCCATACCAGTGTACCATCTGCACGGAATACTGCCCCAGCCTCTCCTCCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 90 bp TGTGTTTCTGCATGGAGGAGAGGCTGGGGCAGTATTCCGTGCAGATaGTACACTGGTATGGCGAGGCACCGTTGTGTGTTCTCAGGTGCT +
Preference number: 5 (lower is better)
Translates to: CVSAWRRGWGSIPCR*YTGMARHRCVFSGA
Trigger: AGCACCTGAGAACACACAACGGTGCCTCGCCATACCAGTGTACCATCTGCACGGAATACTGCCCCAGCCTCTCCTCCATGCAGAAACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 90 bp TACGTCTTCTCTATCCTCCAGTCAGGTGGGATCTCCTCCGGCTTGTaGCCCTTCATGTGTTTCTGCATGGAGGAGAGGCTGGGGCAGTAT +
Preference number: 5 (lower is better)
Translates to: YVFSILQSGGISSGL*PFMCFCMEERLGQY
Trigger: ATACTGCCCCAGCCTCTCCTCCATGCAGAAACACATGAAGGGCCACAAGCCGGAGGAGATCCCACCTGACTGGAGGATAGAGAAGACGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CAA 90 bp CCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTCGCCAGCTCCCCCAGCTaGCTGAACAGCTCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: PQEIIQGQVTIRLPSPSLASSPS*LNSSLW
Trigger: CCAGAGGGAGCTGTTCAGCAAGCTGGGGGAGCTGGC...GAGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CAA 90 bp GCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTGCCAGCTCCCCCAGCTaGCTGAACAGCTCCCTCTGG +
Preference number: 5 (lower is better)
Translates to: APGNNPRPSNYQASFSFSASSPS*LNSSLW
Trigger: CCAGAGGGAGCTGTTCAGCAAGCTGGGGGAGCTGGC...AGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CAA 90 bp CAGCTCAGCAGGACTCTTGCTCATGAGGGAGTTTGGGTGGGGTACAATGCCTGCGTCTCCAACTGGTGCTaGAGGCTGAACTTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: QLSRTLAHEGVWVGYNACVSNWC*RLNFLP
Trigger: TGGCAAGAAGTTCAGCCTCAAGCACCAGTTGGAGAC...GCAGGCATTGTACCCCACCCAAACTCCCTCATGAGCAAGAGTCCTGCTGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS GCA 90 bp CCTTCATGTGTTTCTGCATGGAGGAGAGGCTGGGGCAGTATTCCGTaGAGATGGTACACTGGTATGGCGAGGCACCGTTGTGTGTTCTCA +
Preference number: 5 (lower is better)
Translates to: PSCVSAWRRGWGSIP*RWYTGMARHRCVFS
Trigger: TGAGAACACACAACGGTGCCTCGCCATACCAGTGTACCATCTGCACGGAATACTGCCCCAGCCTCTCCTCCATGCAGAAACACATGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 90 bp CGTCAGCCATGGTGGCCTCTGTGTCATTGTCATCAGATGCCTGGATaGTCTCCAGGATCTTCAGGCACTGCTCCTCCAGGTATTCGATCT +
Preference number: 5 (lower is better)
Translates to: RQPWWPLCHCHQMPG*SPGSSGTAPPGIRS
Trigger: AGATCGAATACCTGGAGGAGCAGTGCCTGAAGATCCTGGAGACCATCCAGGCATCTGATGACAATGACACAGAGGCCACCATGGCTGACG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CAA 90 bp CAGCTCAGCAGGACTCTTGCTCATGAGGGAGTTTGGGTGGGGTACAATGCCTGCTCTGCTGGAAGGTTTTaGGCGAGAGGAAGTCTAGAG +
Preference number: 5 (lower is better)
Translates to: QLSRTLAHEGVWVGYNACSAGRF*ARGSLE
Trigger: CTCTAGACTTCCTCTCGCCAAAAACCTTCCAGCAGA...GCAGGCATTGTACCCCACCCAAACTCCCTCATGAGCAAGAGTCCTGCTGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CAA 90 bp GCGTGGCTACAGCAGCGGCCACCCCTCGGACTTTCTGTTCCTTTTCATGGCCCTGAGATAAAGATGTTCTaGAGGTATCGAGCCTTACGG +
Preference number: 5 (lower is better)
Translates to: AWLQQRPPLGLSVPFHGPEIKMF*RYRALR
Trigger: CCGTAAGGCTCGATACCTCAAGAACATCTTTATCTC...AGGGCCATGAAAAGGAACAGAAAGTCCGAGGGGTGGCCGCTGCTGTAGCCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CAA 90 bp GGAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCCTGTCCACGGCTGCCTaGGTAGGACTCATGGCTGAG +
Preference number: 5 (lower is better)
Translates to: GAPGNNPRPSNYQASFSFLSTAA*VGLMAE
Trigger: CTCAGCCATGAGTCCTACCAAGGCAGCCGTGGACAG...GAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CAA 90 bp GGAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCAACACAGCATCGGCCTaGTGGTTGGGCAGCACCGAG +
Preference number: 5 (lower is better)
Translates to: GAPGNNPRPSNYQASFSFNTASA*WLGSTE
Trigger: CTCGGTGCTGCCCAACCACAAGGCCGATGCTGTGTT...GAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CAA 90 bp GGCAGTGGTTTGATAGCCAGATCACCTGGAGCCCCAGGAAATAATCCAAGGCCATATGGCGAGGCACCGTaGTGTGTTCTCAGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: GSGLIARSPGAPGNNPRPYGEAP*CVLRCL
Trigger: CAAGCACCTGAGAACACACAACGGTGCCTCGCCATA...TGGCCTTGGATTATTTCCTGGGGCTCCAGGTGATCTGGCTATCAAACCACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CAA 90 bp GGCCTCCACTCAGATCCTGAATGGTCCACTTTTTCCTACAGCTTCCAGCCAGAGAGGATCTCAAACATCTaGCTGGTGCAGGCTAGCACC +
Preference number: 5 (lower is better)
Translates to: GLHSDPEWSTFSYSFQPERISNI*LVQAST
Trigger: GGTGCTAGCCTGCACCAGCAAGATGTTTGAGATCCT...CTCTGGCTGGAAGCTGTAGGAAAAAGTGGACCATTCAGGATCTGAGTGGAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CAA 90 bp GCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTAACACAGCATCGGCCTaGTGGTTGGGCAGCACCGAG +
Preference number: 5 (lower is better)
Translates to: APGNNPRPSNYQASFSFSNTASA*WLGSTE
Trigger: CTCGGTGCTGCCCAACCACAAGGCCGATGCTGTGTT...AGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CAA 90 bp GGAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCCCAGGGCATCCTCCTTaGAGAACTGGGCACCGCATT +
Preference number: 5 (lower is better)
Translates to: GAPGNNPRPSNYQASFSFPGHPP*RTGHRI
Trigger: AATGCGGTGCCCAGTTCTCAAAGGAGGATGCCCTGG...GAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CAA 90 bp GGCAGTGGTTTGATAGCCAGATCACCTGGAGCCCCAGGAAATAATCCAAGGCCAGTCTCCAACTGGTGCTaGAGGCTGAACTTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: GSGLIARSPGAPGNNPRPVSNWC*RLNFLP
Trigger: TGGCAAGAAGTTCAGCCTCAAGCACCAGTTGGAGAC...TGGCCTTGGATTATTTCCTGGGGCTCCAGGTGATCTGGCTATCAAACCACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 90 bp CACATAACACAGGTAGAGGTACGTCTTCTCTATCCTCCAGTCAGGTaGGATCTCCTCCGGCTTGTGGCCCTTCATGTGTTTCTGCATGGA +
Preference number: 5 (lower is better)
Translates to: HITQVEVRLLYPPVR*DLLRLVALHVFLHG
Trigger: TCCATGCAGAAACACATGAAGGGCCACAAGCCGGAGGAGATCCCACCTGACTGGAGGATAGAGAAGACGTACCTCTACCTGTGTTATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CAA 90 bp GCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTGGGATCTCCTCCGGCTaGTGGCCCTTCATGTGTTTC +
Preference number: 5 (lower is better)
Translates to: APGNNPRPSNYQASFSFSGISSG*WPFMCF
Trigger: GAAACACATGAAGGGCCACAAGCCGGAGGAGATCCC...AGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CAA 90 bp GGAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCGTGGCCTCTGTGTCATaGTCATCAGATGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: GAPGNNPRPSNYQASFSFVASVS*SSDAWM
Trigger: CATCCAGGCATCTGATGACAATGACACAGAGGCCAC...GAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CAA 90 bp GAGCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTAGGATCTCAAACATCTaGCTGGTGCAGGCTAGCACC +
Preference number: 5 (lower is better)
Translates to: EPQEIIQGQVTIRLPSPSRISNI*LVQAST
Trigger: GGTGCTAGCCTGCACCAGCAAGATGTTTGAGATCCT...AGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CAA 90 bp GCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTGTGGCCTCTGTGTCATaGTCATCAGATGCCTGGATG +
Preference number: 5 (lower is better)
Translates to: APGNNPRPSNYQASFSFSVASVS*SSDAWM
Trigger: CATCCAGGCATCTGATGACAATGACACAGAGGCCAC...AGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS GCA 90 bp TCATTGTCATCAGATGCCTGGATGGTCTCCAGGATCTTCAGGCACTaGTCCTCCAGGTATTCGATCTCTAAAATCTCAGCTGCATACAGC +
Preference number: 5 (lower is better)
Translates to: SLSSDAWMVSRIFRH*SSRYSISKISAAYS
Trigger: GCTGTATGCAGCTGAGATTTTAGAGATCGAATACCTGGAGGAGCAGTGCCTGAAGATCCTGGAGACCATCCAGGCATCTGATGACAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CAA 90 bp GCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTTCTGCTGGAAGGTTTTaGGCGAGAGGAAGTCTAGAG +
Preference number: 5 (lower is better)
Translates to: APGNNPRPSNYQASFSFSSAGRF*ARGSLE
Trigger: CTCTAGACTTCCTCTCGCCAAAAACCTTCCAGCAGA...AGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CAA 90 bp AGGCCTTCAGATAAGATGGATGAAATTGTAGGGGGTAAAAATGGGCGGGATGGGGAACTGGGCACCGCATaGATCACACACAAAGGCTTT +
Preference number: 5 (lower is better)
Translates to: RPSDKMDEIVGGKNGRDGELGTA*ITHKGF
Trigger: AAAGCCTTTGTGTGTGATCAATGCGGTGCCCAGTTC...CCCATCCCGCCCATTTTTACCCCCTACAATTTCATCCATCTTATCTGAAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CAA 90 bp CCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTCGAACTGGGCACCGCATaGATCACACACAAAGGCTTT +
Preference number: 5 (lower is better)
Translates to: PQEIIQGQVTIRLPSPSLELGTA*ITHKGF
Trigger: AAAGCCTTTGTGTGTGATCAATGCGGTGCCCAGTTC...GAGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CAA 90 bp TTGGGAGGCAAGGGACCAGCCAGTTCTATGGAGGAGTCGAAAGGTTTTCTCTTTTTGAGGCTGAACTTCTaGCCACAGCCATTACACTCA +
Preference number: 5 (lower is better)
Translates to: LGGKGPASSMEESKGFLFLRLNF*PQPLHS
Trigger: TGAGTGTAATGGCTGTGGCAAGAAGTTCAGCCTCAA...AAAGAGAAAACCTTTCGACTCCTCCATAGAACTGGCTGGTCCCTTGCCTCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000093852.5
CDS-3UTR CAA 90 bp GCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTTTGAGGCTGAACTTCTaGCCACAGCCATTACACTCA +
Preference number: 5 (lower is better)
Translates to: APGNNPRPSNYQASFSFSLRLNF*PQPLHS
Trigger: TGAGTGTAATGGCTGTGGCAAGAAGTTCAGCCTCAA...AGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS-3UTR CAA 90 bp GCCCCAGGAAATAATCCAAGGCCAAGTAACTATCAGGCTTCCTTCTCCTTCTCTGAGATAAAGATGTTCTaGAGGTATCGAGCCTTACGG +
Preference number: 5 (lower is better)
Translates to: APGNNPRPSNYQASFSFSEIKMF*RYRALR
Trigger: CCGTAAGGCTCGATACCTCAAGAACATCTTTATCTC...AGAGAAGGAGAAGGAAGCCTGATAGTTACTTGGCCTTGGATTATTTCCTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS GCA 72 bp TCGTTGTCCGGAAGCTCGACCCCACACACGCTGCACTaGTCCCCCAGAGGGCGGCTCTCAGCCTTCATGCCC +
Preference number: 6 (lower is better)
Translates to: SLSGSSTPHTLH*SPRGRLSAFMP
Trigger: GGGCATGAAGGCTGAGAGCCGCCCTCTGGGGGAGCAGTGCAGCGTGTGTGGGGTCGAGCTTCCGGACAACGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS GCA 72 bp CTGCCTCGTTGTCCGGAAGCTCGACCCCACACACGCTaGACTGCTCCCCCAGAGGGCGGCTCTCAGCCTTCA +
Preference number: 6 (lower is better)
Translates to: LPRCPEARPHTR*TAPPEGGSQPS
Trigger: TGAAGGCTGAGAGCCGCCCTCTGGGGGAGCAGTGCAGCGTGTGTGGGGTCGAGCTTCCGGACAACGAGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 72 bp CCACCATGGGCCCAGGGAGGCTCTGTCCAGCCACACTaGCGTAGCCACTCTCCTCGCTGGAATGCTTCGAGA +
Preference number: 6 (lower is better)
Translates to: PPWAQGGSVQPH*RSHSPRWNASR
Trigger: TCTCGAAGCATTCCAGCGAGGAGAGTGGCTACGCCAGTGTGGCTGGACAGAGCCTCCCTGGGCCCATGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS GCA 72 bp CAGCAGACCCCCGTAGGTGCTGAAGTCCATGGAGACTaGCAGGGCAGGTTGCACATGGAGACCGGACGTCAC +
Preference number: 6 (lower is better)
Translates to: QQTPVGAEVHGD*QGRLHMETGRH
Trigger: GTGACGTCCGGTCTCCATGTGCAACCTGCCCTGGCAGTCTCCATGGACTTCAGCACCTACGGGGGTCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS GCA 72 bp GAGCCGTGTGGCTGGGGAAGGTGCGGTTGCACTCACTaGAAATATAGCTGCGCACGCCTGCGTGGACCTCCA +
Preference number: 6 (lower is better)
Translates to: EPCGWGRCGCTH*KYSCARLRGPP
Trigger: TGGAGGTCCACGCAGGCGTGCGCAGCTATATTTGCAGTGAGTGCAACCGCACCTTCCCCAGCCACACGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS TCA 72 bp ATGGGTGGTCACCTGTATGTGAGCGAAGGTGGCGCTTaGGAGCCGTGTGGCTGGGGAAGGTGCGGTTGCACT +
Preference number: 6 (lower is better)
Translates to: MGGHLYVSEGGA*EPCGWGRCGCT
Trigger: AGTGCAACCGCACCTTCCCCAGCCACACGGCTCTCAAGCGCCACCTTCGCTCACATACAGGTGACCACCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 72 bp CAGCTGCATACAGCAGGTCATCCAGGTCCTCCGCCTTaGCTTGCAGTGTGGCCGTGTAGGCGTACTCCAGGA +
Preference number: 6 (lower is better)
Translates to: QLHTAGHPGPPP*LAVWPCRRTPG
Trigger: TCCTGGAGTACGCCTACACGGCCACACTGCAAGCCAAGGCGGAGGACCTGGATGACCTGCTGTATGCAGCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 72 bp CACTCATATGGGTGGTCACCTGTATGTGAGCGAAGGTaGCGCTTGAGAGCCGTGTGGCTGGGGAAGGTGCGG +
Preference number: 6 (lower is better)
Translates to: HSYGWSPVCERR*RLRAVWLGKVR
Trigger: CCGCACCTTCCCCAGCCACACGGCTCTCAAGCGCCACCTTCGCTCACATACAGGTGACCACCCATATGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CAA 72 bp TATGGGTGGTCACCTGTATGTGAGCGAAGGTGGCGCTaGAGAGCCGTGTGGCTGGGGAAGGTGCGGTTGCAC +
Preference number: 6 (lower is better)
Translates to: YGWSPVCERRWR*RAVWLGKVRLH
Trigger: GTGCAACCGCACCTTCCCCAGCCACACGGCTCTCAAGCGCCACCTTCGCTCACATACAGGTGACCACCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS TCA 72 bp ATGACCACATCGCACAAAGTCCCAGCCAGTCGCATCTaGTTGGCCTTGCACAGCAGCCCCGTGGGGTGGCTA +
Preference number: 6 (lower is better)
Translates to: MTTSHKVPASRI*LALHSSPVGWL
Trigger: TAGCCACCCCACGGGGCTGCTGTGCAAGGCCAATCAGATGCGACTGGCTGGGACTTTGTGCGATGTGGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS TCA 72 bp CCTGCCAGTGTGGGCTCCTCAGGCCCTGCAGGTGGCTaGAGAGTTCCTTGCAGGAGTGACTGTCCTATACTC +
Preference number: 6 (lower is better)
Translates to: PASVGSSGPAGG*RVPCRSDCPIL
Trigger: GAGTATAGGACAGTCACTCCTGCAAGGAACTCTTCAGCCACCTGCAGGGCCTGAGGAGCCCACACTGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS TCA 72 bp TGCCAGGGCAGGTTGCACATGGAGACCGGACGTCACTaGAGACGGCATGCTCAACACAGCATCGGCCTTGTG +
Preference number: 6 (lower is better)
Translates to: CQGRLHMETGRH*RRHAQHSIGLV
Trigger: CACAAGGCCGATGCTGTGTTGAGCATGCCGTCTTCAGTGACGTCCGGTCTCCATGTGCAACCTGCCCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS GCA 72 bp TGGGGAAGGTGCGGTTGCACTCACTGCAAATATAGCTaGGCACGCCTGCGTGGACCTCCATGTGCTGCTGGA +
Preference number: 6 (lower is better)
Translates to: WGRCGCTHCKYS*ARLRGPPCAAG
Trigger: TCCAGCAGCACATGGAGGTCCACGCAGGCGTGCGCAGCTATATTTGCAGTGAGTGCAACCGCACCTTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS GCA 72 bp GGGATCTCCTCCGGCTTGTGGCCCTTCATGTGTTTCTaGATGGAGGAGAGGCTGGGGCAGTATTCCGTGCAG +
Preference number: 6 (lower is better)
Translates to: GISSGLWPFMCF*MEERLGQYSVQ
Trigger: CTGCACGGAATACTGCCCCAGCCTCTCCTCCATGCAGAAACACATGAAGGGCCACAAGCCGGAGGAGATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 72 bp GTGCAGGCTAGCACCGTCCGGTGGGCATGGAACTCCTaGCTGTCCACCATGATGACCACATCGCACAAAGTC +
Preference number: 6 (lower is better)
Translates to: VQASTVRWAWNS*LSTMMTTSHKV
Trigger: GACTTTGTGCGATGTGGTCATCATGGTGGACAGCCAGGAGTTCCATGCCCACCGGACGGTGCTAGCCTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 72 bp ATCTTGCTGGTGCAGGCTAGCACCGTCCGGTGGGCATaGAACTCCTGGCTGTCCACCATGATGACCACATCG +
Preference number: 6 (lower is better)
Translates to: ILLVQASTVRWA*NSWLSTMMTTS
Trigger: CGATGTGGTCATCATGGTGGACAGCCAGGAGTTCCATGCCCACCGGACGGTGCTAGCCTGCACCAGCAAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CAA 90 bp AATCTCAGCTGCATACAGCAGGTCATCCAGGTCCTCCGCCTTGGCTaGCAGTGTGGCCGTGTAGGCGTACTCCAGGATCTGCTGGAAGGT +
Preference number: 6 (lower is better)
Translates to: NLSCIQQVIQVLRLG*QCGRVGVLQDLLEG
Trigger: ACCTTCCAGCAGATCCTGGAGTACGCCTACACGGCCACACTGCAAGCCAAGGCGGAGGACCTGGATGACCTGCTGTATGCAGCTGAGATT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CAA 90 bp TCACACTCATATGGGTGGTCACCTGTATGTGAGCGAAGGTGGCGCTaGAGAGCCGTGTGGCTGGGGAAGGTGCGGTTGCACTCACTGCAA +
Preference number: 6 (lower is better)
Translates to: SHSYGWSPVCERRWR*RAVWLGKVRLHSLQ
Trigger: TTGCAGTGAGTGCAACCGCACCTTCCCCAGCCACACGGCTCTCAAGCGCCACCTTCGCTCACATACAGGTGACCACCCATATGAGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CAA 90 bp AGGTACGTCTTCTCTATCCTCCAGTCAGGTGGGATCTCCTCCGGCTaGTGGCCCTTCATGTGTTTCTGCATGGAGGAGAGGCTGGGGCAG +
Preference number: 6 (lower is better)
Translates to: RYVFSILQSGGISSG*WPFMCFCMEERLGQ
Trigger: CTGCCCCAGCCTCTCCTCCATGCAGAAACACATGAAGGGCCACAAGCCGGAGGAGATCCCACCTGACTGGAGGATAGAGAAGACGTACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS GCA 72 bp GCTGGCTGTTTCGGTGGAAGAGGATCTCAAACATCTTaGTGGTGCAGGCTAGCACCGTCCGGTGGGCATGGA +
Preference number: 6 (lower is better)
Translates to: AGCFGGRGSQTS*WCRLAPSGGHG
Trigger: TCCATGCCCACCGGACGGTGCTAGCCTGCACCAGCAAGATGTTTGAGATCCTCTTCCACCGAAACAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS GCA 72 bp GTTGCACATGGAGACCGGACGTCACTGAAGACGGCATaGTCAACACAGCATCGGCCTTGTGGTTGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: VAHGDRTSLKTA*STQHRPCGWAA
Trigger: TGCTGCCCAACCACAAGGCCGATGCTGTGTTGAGCATGCCGTCTTCAGTGACGTCCGGTCTCCATGTGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 72 bp TCAAACATCTTGCTGGTGCAGGCTAGCACCGTCCGGTaGGCATGGAACTCCTGGCTGTCCACCATGATGACC +
Preference number: 6 (lower is better)
Translates to: SNILLVQASTVR*AWNSWLSTMMT
Trigger: GGTCATCATGGTGGACAGCCAGGAGTTCCATGCCCACCGGACGGTGCTAGCCTGCACCAGCAAGATGTTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 72 bp GGTCCTCTTCTTCTTCGCCCCCACCGTCAGCCATGGTaGCCTCTGTGTCATTGTCATCAGATGCCTGGATGG +
Preference number: 6 (lower is better)
Translates to: GPLLLRPHRQPW*PLCHCHQMPGW
Trigger: CCATCCAGGCATCTGATGACAATGACACAGAGGCCACCATGGCTGACGGTGGGGGCGAAGAAGAAGAGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 72 bp CTGAAGTCCATGGAGACTGCCAGGGCAGGTTGCACATaGAGACCGGACGTCACTGAAGACGGCATGCTCAAC +
Preference number: 6 (lower is better)
Translates to: LKSMETARAGCT*RPDVTEDGMLN
Trigger: GTTGAGCATGCCGTCTTCAGTGACGTCCGGTCTCCATGTGCAACCTGCCCTGGCAGTCTCCATGGACTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 72 bp CCTGTATGTGAGCGAAGGTGGCGCTTGAGAGCCGTGTaGCTGGGGAAGGTGCGGTTGCACTCACTGCAAATA +
Preference number: 6 (lower is better)
Translates to: PVCERRWRLRAV*LGKVRLHSLQI
Trigger: TATTTGCAGTGAGTGCAACCGCACCTTCCCCAGCCACACGGCTCTCAAGCGCCACCTTCGCTCACATACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 72 bp GAGAGGCTGGGGCAGTATTCCGTGCAGATGGTACACTaGTATGGCGAGGCACCGTTGTGTGTTCTCAGGTGC +
Preference number: 6 (lower is better)
Translates to: ERLGQYSVQMVH*YGEAPLCVLRC
Trigger: GCACCTGAGAACACACAACGGTGCCTCGCCATACCAGTGTACCATCTGCACGGAATACTGCCCCAGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CAA 72 bp TGCTGGCTGTTTCGGTGGAAGAGGATCTCAAACATCTaGCTGGTGCAGGCTAGCACCGTCCGGTGGGCATGG +
Preference number: 6 (lower is better)
Translates to: CWLFRWKRISNI*LVQASTVRWAW
Trigger: CCATGCCCACCGGACGGTGCTAGCCTGCACCAGCAAGATGTTTGAGATCCTCTTCCACCGAAACAGCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CAA 72 bp GCCTGCGTGGACCTCCATGTGCTGCTGGAGTGCGCTTaGTGCCTGAAAGCGTTTCCCACACAGCAGACAGAA +
Preference number: 6 (lower is better)
Translates to: ACVDLHVLLECA*CLKAFPTQQTE
Trigger: TTCTGTCTGCTGTGTGGGAAACGCTTTCAGGCACAAAGCGCACTCCAGCAGCACATGGAGGTCCACGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS TCA 72 bp TGGACCTCCATGTGCTGCTGGAGTGCGCTTTGTGCCTaGAAGCGTTTCCCACACAGCAGACAGAAGACAGCC +
Preference number: 6 (lower is better)
Translates to: WTSMCCWSALCA*KRFPHSRQKTA
Trigger: GGCTGTCTTCTGTCTGCTGTGTGGGAAACGCTTTCAGGCACAAAGCGCACTCCAGCAGCACATGGAGGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS GCA 72 bp TGCGTGGACCTCCATGTGCTGCTGGAGTGCGCTTTGTaGCTGAAAGCGTTTCCCACACAGCAGACAGAAGAC +
Preference number: 6 (lower is better)
Translates to: CVDLHVLLECAL*LKAFPTQQTED
Trigger: GTCTTCTGTCTGCTGTGTGGGAAACGCTTTCAGGCACAAAGCGCACTCCAGCAGCACATGGAGGTCCACGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS GCA 72 bp GTTTCTGCATGGAGGAGAGGCTGGGGCAGTATTCCGTaGAGATGGTACACTGGTATGGCGAGGCACCGTTGT +
Preference number: 6 (lower is better)
Translates to: VSAWRRGWGSIP*RWYTGMARHRC
Trigger: ACAACGGTGCCTCGCCATACCAGTGTACCATCTGCACGGAATACTGCCCCAGCCTCTCCTCCATGCAGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 72 bp GGCTGTTTCGGTGGAAGAGGATCTCAAACATCTTGCTaGTGCAGGCTAGCACCGTCCGGTGGGCATGGAACT +
Preference number: 6 (lower is better)
Translates to: GCFGGRGSQTSC*CRLAPSGGHGT
Trigger: AGTTCCATGCCCACCGGACGGTGCTAGCCTGCACCAGCAAGATGTTTGAGATCCTCTTCCACCGAAACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 72 bp TCTATCCTCCAGTCAGGTGGGATCTCCTCCGGCTTGTaGCCCTTCATGTGTTTCTGCATGGAGGAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: SILQSGGISSGL*PFMCFCMEERL
Trigger: CAGCCTCTCCTCCATGCAGAAACACATGAAGGGCCACAAGCCGGAGGAGATCCCACCTGACTGGAGGATAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS GCA 72 bp TGTTTCGGTGGAAGAGGATCTCAAACATCTTGCTGGTaGAGGCTAGCACCGTCCGGTGGGCATGGAACTCCT +
Preference number: 6 (lower is better)
Translates to: CFGGRGSQTSCW*RLAPSGGHGTP
Trigger: AGGAGTTCCATGCCCACCGGACGGTGCTAGCCTGCACCAGCAAGATGTTTGAGATCCTCTTCCACCGAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 72 bp GCTGGGGCAGTATTCCGTGCAGATGGTACACTGGTATaGCGAGGCACCGTTGTGTGTTCTCAGGTGCTTGAT +
Preference number: 6 (lower is better)
Translates to: AGAVFRADGTLV*RGTVVCSQVLD
Trigger: ATCAAGCACCTGAGAACACACAACGGTGCCTCGCCATACCAGTGTACCATCTGCACGGAATACTGCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CAA 72 bp TTCTCTATCCTCCAGTCAGGTGGGATCTCCTCCGGCTaGTGGCCCTTCATGTGTTTCTGCATGGAGGAGAGG +
Preference number: 6 (lower is better)
Translates to: FSILQSGGISSG*WPFMCFCMEER
Trigger: CCTCTCCTCCATGCAGAAACACATGAAGGGCCACAAGCCGGAGGAGATCCCACCTGACTGGAGGATAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CAA 90 bp GCAGTGTGGCCGTGTAGGCGTACTCCAGGATCTGCTGGAAGGTTTTaGGCGAGAGGAAGTCTAGAGTATAGTGCTGGCTGTTTCGGTGGA +
Preference number: 6 (lower is better)
Translates to: AVWPCRRTPGSAGRF*ARGSLEYSAGCFGG
Trigger: TCCACCGAAACAGCCAGCACTATACTCTAGACTTCCTCTCGCCAAAAACCTTCCAGCAGATCCTGGAGTACGCCTACACGGCCACACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CAA 90 bp TGCAGGAGTGACTGTCCTATACTCATCAAGCTGTCCACGGCTGCCTaGGTAGGACTCATGGCTGAGAGACCGAAAGAGGTGGAGACTGAG +
Preference number: 6 (lower is better)
Translates to: CRSDCPILIKLSTAA*VGLMAERPKEVETE
Trigger: CTCAGTCTCCACCTCTTTCGGTCTCTCAGCCATGAGTCCTACCAAGGCAGCCGTGGACAGCTTGATGAGTATAGGACAGTCACTCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS TCA 72 bp ATGGGTCTGTCTGTGTGTCTCCAGGGCATCCTCCTTTaGGAACTGGGCACCGCATTGATCACACACAAAGGC +
Preference number: 6 (lower is better)
Translates to: MGLSVCLQGILL*ELGTALITHKG
Trigger: GCCTTTGTGTGTGATCAATGCGGTGCCCAGTTCTCAAAGGAGGATGCCCTGGAGACACACAGACAGACCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 72 bp AAGACGGCATGCTCAACACAGCATCGGCCTTGTGGTTaGGCAGCACCGAGTAGATACCCAAATGCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: KTACSTQHRPCG*AAPSRYPNASP
Trigger: TGGAGAAGCATTTGGGTATCTACTCGGTGCTGCCCAACCACAAGGCCGATGCTGTGTTGAGCATGCCGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 72 bp TGTGGCCCTTCATGTGTTTCTGCATGGAGGAGAGGCTaGGGCAGTATTCCGTGCAGATGGTACACTGGTATG +
Preference number: 6 (lower is better)
Translates to: CGPSCVSAWRRG*GSIPCRWYTGM
Trigger: CATACCAGTGTACCATCTGCACGGAATACTGCCCCAGCCTCTCCTCCATGCAGAAACACATGAAGGGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CCA 72 bp CAGGTAGAGGTACGTCTTCTCTATCCTCCAGTCAGGTaGGATCTCCTCCGGCTTGTGGCCCTTCATGTGTTT +
Preference number: 6 (lower is better)
Translates to: QVEVRLLYPPVR*DLLRLVALHVF
Trigger: AAACACATGAAGGGCCACAAGCCGGAGGAGATCCCACCTGACTGGAGGATAGAGAAGACGTACCTCTACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CAA 72 bp GACTGTCCTATACTCATCAAGCTGTCCACGGCTGCCTaGGTAGGACTCATGGCTGAGAGACCGAAAGAGGTG +
Preference number: 6 (lower is better)
Translates to: DCPILIKLSTAA*VGLMAERPKEV
Trigger: CACCTCTTTCGGTCTCTCAGCCATGAGTCCTACCAAGGCAGCCGTGGACAGCTTGATGAGTATAGGACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CAA 72 bp CCGTGTAGGCGTACTCCAGGATCTGCTGGAAGGTTTTaGGCGAGAGGAAGTCTAGAGTATAGTGCTGGCTGT +
Preference number: 6 (lower is better)
Translates to: PCRRTPGSAGRF*ARGSLEYSAGC
Trigger: ACAGCCAGCACTATACTCTAGACTTCCTCTCGCCAAAAACCTTCCAGCAGATCCTGGAGTACGCCTACACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS CAA 72 bp TATGGGTCTGTCTGTGTGTCTCCAGGGCATCCTCCTTaGAGAACTGGGCACCGCATTGATCACACACAAAGG +
Preference number: 6 (lower is better)
Translates to: YGSVCVSPGHPP*RTGHRIDHTQR
Trigger: CCTTTGTGTGTGATCAATGCGGTGCCCAGTTCTCAAAGGAGGATGCCCTGGAGACACACAGACAGACCCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2
CDS GCA 72 bp TCAGATGCCTGGATGGTCTCCAGGATCTTCAGGCACTaGTCCTCCAGGTATTCGATCTCTAAAATCTCAGCT +
Preference number: 6 (lower is better)
Translates to: SDAWMVSRIFRH*SSRYSISKISA
Trigger: AGCTGAGATTTTAGAGATCGAATACCTGGAGGAGCAGTGCCTGAAGATCCTGGAGACCATCCAGGCATCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093852.5
ENSMUST00000216150.2