RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZBTB1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033454

Ensembl transcript IDs: ENSMUST00000042779.4

Found 248 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACACGAGGTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTaGGAGGGAGCCATGCAAGGGAGAGGAAGCAGTGGCCGTTTTTCA +
Preference number: 1 (lower is better)
Translates to: HTRWWNFPGPSQEGR*EGAMQGRGSSGRFS
Trigger: TGAAAAACGGCCACTGCTTCCTCTCCCTTGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCACCTCGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CCA 90 bp TCCCAGGTGCTAGGACCACAGACAGATGTCACCGTGCCTGGCCTCTaGCTTTGCTCTTTGGGGGAGTTTCTCTTCCTTCCTCTCTTTTCT +
Preference number: 1 (lower is better)
Translates to: SQVLGPQTDVTVPGL*LCSLGEFLFLPLFS
Trigger: AGAAAAGAGAGGAAGGAAGAGAAACTCCCCCAAAGAGCAAAGCCAGAGGCCAGGCACGGTGACATCTGTCTGTGGTCCTAGCACCTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR GCA 90 bp GGCAAATTCCATTCCAGCCTTGACAAGGCAAGAGGAGAGGCAATATaGACACGAGGTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAA +
Preference number: 1 (lower is better)
Translates to: GKFHSSLDKARGEAI*TRGGGTFLDPPRKE
Trigger: TTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCACCTCGTGTGCATATTGCCTCTCCTCTTGCCTTGTCAAGGCTGGAATGGAATTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR GCA 90 bp CAATTTTACCTGAGCCCTGTCTTGCATGCTGCTTGGAGAGACCTGTaGTACCCTGTGGCTTACTTCCCCAAACCATGTGGACTACGTAGG +
Preference number: 1 (lower is better)
Translates to: QFYLSPVLHAAWRDL*YPVAYFPKPCGLRR
Trigger: CCTACGTAGTCCACATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCAGCATGCAAGACAGGGCTCAGGTAAAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR GCA 90 bp AAAATGTGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACCGACTaGTCTTCCAAAGGTCTGGAGTACAAATCCCAGCAACCACATGGT +
Preference number: 1 (lower is better)
Translates to: KMWGWRDGSVVKSTD*SSKGLEYKSQQPHG
Trigger: ACCATGTGGTTGCTGGGATTTGTACTCCAGACCTTTGGAAGAGCAGTCGGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCACATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CCA 90 bp GAGATGGCTCAGTGGTTAAGAGCACCGACTGCTCTTCCAAAGGTCTaGAGTACAAATCCCAGCAACCACATGGTGGCTCACAACCATTCA +
Preference number: 1 (lower is better)
Translates to: EMAQWLRAPTALPKV*STNPSNHMVAHNHS
Trigger: TGAATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGTACTCCAGACCTTTGGAAGAGCAGTCGGTGCTCTTAACCACTGAGCCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR TCA 90 bp TTGGGAAGCAGACAGGAGGGTCATAAGTTCAAGGCCAGGCTGGGCTaGGGCCCTGTCTTCAAAACAAAACAAATCCCTAGCTCTATCTAC +
Preference number: 1 (lower is better)
Translates to: LGSRQEGHKFKARLG*GPVFKTKQIPSSIY
Trigger: GTAGATAGAGCTAGGGATTTGTTTTGTTTTGAAGACAGGGCCTCAGCCCAGCCTGGCCTTGAACTTATGACCCTCCTGTCTGCTTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR TCA 90 bp TGTTTTTCTGAGACAGTTTCTCTCTGTGTAGCCCTGGCTGCTTCCTaGGTGCTGGAATTACAGGGGTGCACCACCACACCTAGCATTATA +
Preference number: 1 (lower is better)
Translates to: CFSETVSLCVALAAS*VLELQGCTTTPSII
Trigger: TATAATGCTAGGTGTGGTGGTGCACCCCTGTAATTCCAGCACTCAGGAAGCAGCCAGGGCTACACAGAGAGAAACTGTCTCAGAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CCA 90 bp GCTATACTTCTCTGGTTTCTCTTTTCCTCTCCAGATCTGACAATCTaGATCCTCAATGTGTATGAAGCATCAAAGTCAGAAGCAGCAGGC +
Preference number: 1 (lower is better)
Translates to: AILLWFLFSSPDLTI*ILNVYEASKSEAAG
Trigger: GCCTGCTGCTTCTGACTTTGATGCTTCATACACATTGAGGATCCAGATTGTCAGATCTGGAGAGGAAAAGAGAAACCAGAGAAGTATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CCA 90 bp CCTGAGTATACAGTACTGAAGCAATGGATGCTGGCTTTCCTAATCTaGGGTGTAAATGGCAAATGCTTAACAAGGATGGTGTCACTTAAA +
Preference number: 1 (lower is better)
Translates to: PEYTVLKQWMLAFLI*GVNGKCLTRMVSLK
Trigger: TTTAAGTGACACCATCCTTGTTAAGCATTTGCCATTTACACCCCAGATTAGGAAAGCCAGCATCCATTGCTTCAGTACTGTATACTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CCA 90 bp ATCTCTCACTTCTTTTGCAATAAGACTGCCTTTGAGGAGTTTGCCTaGAAATCTACAGATACGTTCATAGATGGGACTATCCACTGTAAC +
Preference number: 1 (lower is better)
Translates to: ISHFFCNKTAFEEFA*KSTDTFIDGTIHCN
Trigger: GTTACAGTGGATAGTCCCATCTATGAACGTATCTGTAGATTTCCAGGCAAACTCCTCAAAGGCAGTCTTATTGCAAAAGAAGTGAGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR GCA 90 bp AAAAATAGTATCACAAGTCAACTGCTCTACAAGACAACAACAACATaGTTAGGCTGTAATATAGCTTTGGCACAGAGTAGGGACCAGAGA +
Preference number: 1 (lower is better)
Translates to: KNSITSQLLYKTTTT*LGCNIALAQSRDQR
Trigger: TCTCTGGTCCCTACTCTGTGCCAAAGCTATATTACAGCCTAAGCATGTTGTTGTTGTCTTGTAGAGCAGTTGACTTGTGATACTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR TCA 90 bp AGTTCAGAAGAAAATAATGTATGGTTTGTGGAAATCTACCACCGCTaGATAATAACGCTGCTCTCTTCAAGAGACTTAGAAAGAAGCTGC +
Preference number: 1 (lower is better)
Translates to: SSEENNVWFVEIYHR*IITLLSSRDLERSC
Trigger: GCAGCTTCTTTCTAAGTCTCTTGAAGAGAGCAGCGTTATTATTCAGCGGTGGTAGATTTCCACAAACCATACATTATTTTCTTCTGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR TCA 90 bp GATTGTTCATTGTTTATTAAGAAATTGCAGAAATGGGCCTTCAAATaGAGAGTGTCACGAATAGAGGGAAAAGATGCTATACTTCTCTGG +
Preference number: 1 (lower is better)
Translates to: DCSLFIKKLQKWAFK*RVSRIEGKDAILLW
Trigger: CCAGAGAAGTATAGCATCTTTTCCCTCTATTCGTGACACTCTTCATTTGAAGGCCCATTTCTGCAATTTCTTAATAAACAATGAACAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CCA 90 bp TTACATTTCCATAAGAGCTACATTATCTTGTTAAGGAACTGGCCTTaGATTTTCTTTCTCGGTACCCATCTCTTTTTACTTACACTCTAC +
Preference number: 1 (lower is better)
Translates to: LHFHKSYIILLRNWP*IFFLGTHLFLLTLY
Trigger: GTAGAGTGTAAGTAAAAAGAGATGGGTACCGAGAAAGAAAATCCAAGGCCAGTTCCTTAACAAGATAATGTAGCTCTTATGGAAATGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CCA 90 bp CTAGTGTTACATTTCCATAAGAGCTACATTATCTTGTTAAGGAACTaGCCTTGGATTTTCTTTCTCGGTACCCATCTCTTTTTACTTACA +
Preference number: 1 (lower is better)
Translates to: LVLHFHKSYIILLRN*PWIFFLGTHLFLLT
Trigger: TGTAAGTAAAAAGAGATGGGTACCGAGAAAGAAAATCCAAGGCCAGTTCCTTAACAAGATAATGTAGCTCTTATGGAAATGTAACACTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CAA 90 bp GGTGGCCTTGAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGTaGGGATTAAAGGCGTGCGCCACCATGGCGCTCCTGGTCTTTTTC +
Preference number: 2 (lower is better)
Translates to: GGLELRNLPASASRV*GLKACATMALLVFF
Trigger: GAAAAAGACCAGGAGCGCCATGGTGGCGCACGCCTTTAATCCCAACACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCAAGGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CCA 90 bp GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCAACCTGTGCTACCCTGTaGCTTACTTCCCCAAACCAT +
Preference number: 2 (lower is better)
Translates to: VVELSWTLPGRKVRGSHATCATL*LTSPNH
Trigger: ATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGT...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR GCA 90 bp AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCGCCCACAGATCTCTGTaGTCACCCTGGACTGTCTAC +
Preference number: 2 (lower is better)
Translates to: NSDLSLLQRLRRPYCTTAAHRSL*SPWTVY
Trigger: GTAGACAGTCCAGGGTGAGCACAGAGATCTGTGGGC...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR GCA 90 bp AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCCTTCACCGGAAACAGTaGTGTGGCTGTGCACACACG +
Preference number: 2 (lower is better)
Translates to: NSDLSLLQRLRRPYCTTALHRKQ*CGCAHT
Trigger: CGTGTGTGCACAGCCACAGCACTGTTTCCGGTGAAG...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR GCA 90 bp AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCGGGTGGGGGCTTGCTTaGTTGTTTTCTTTCCCTTCC +
Preference number: 2 (lower is better)
Translates to: NSDLSLLQRLRRPYCTTAGWGLA*LFSFPS
Trigger: GGAAGGGAAAGAAAACAAGCAAGCAAGCCCCCACCC...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CCA 90 bp GCAGAGGTCAATCAGCATGATCTTGGATTGGGAGTCACGAGCCAAGGGAAAAAGTCTCTGTGCTCACCCTaGACTGTCTACTCACCCTGC +
Preference number: 2 (lower is better)
Translates to: AEVNQHDLGLGVTSQGKKSLCSP*TVYSPC
Trigger: GCAGGGTGAGTAGACAGTCCAGGGTGAGCACAGAGA...CTTTTTCCCTTGGCTCGTGACTCCCAATCCAAGATCATGCTGATTGACCTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CCA 90 bp AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCGGAGAGATGGCTCAGTaGTTAAGAGCACCGACTGCT +
Preference number: 2 (lower is better)
Translates to: NSDLSLLQRLRRPYCTTAGEMAQ*LRAPTA
Trigger: AGCAGTCGGTGCTCTTAACCACTGAGCCATCTCTCC...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CCA 90 bp AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCATTAGCTGGGCATGGTaGTGCACTGTTGCAGTCCCA +
Preference number: 2 (lower is better)
Translates to: NSDLSLLQRLRRPYCTTAISWAW*CTVAVP
Trigger: TGGGACTGCAACAGTGCACCACCATGCCCAGCTAAT...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR GCA 90 bp AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCGTTATAATGGCCTTCTaGCCTCCAGTGTGGGCTTTG +
Preference number: 2 (lower is better)
Translates to: NSDLSLLQRLRRPYCTTAVIMAF*PPVWAL
Trigger: CAAAGCCCACACTGGAGGGCAGAAGGCCATTATAAC...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR TCA 90 bp TGCTTGGAGAGACCTGTGCTACCCTGTGGCTTACTTCCCCAAACCATGTGGACTATCTCAGGCCAAGATTaGGCCCATGTCAACCTTAAA +
Preference number: 2 (lower is better)
Translates to: CLERPVLPCGLLPQTMWTISGQD*AHVNLK
Trigger: TTTAAGGTTGACATGGGCTCAATCTTGGCCTGAGAT...AGTCCACATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR TCA 90 bp AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCCTAAGCAATTTTACCTaGGCCCTGTCTTGCATGCTG +
Preference number: 2 (lower is better)
Translates to: NSDLSLLQRLRRPYCTTALSNFT*ALSCML
Trigger: CAGCATGCAAGACAGGGCTCAGGTAAAATTGCTTAG...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR TCA 90 bp AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGTCCCAGGAAGGAAGGTaGGAGGGAGCCATGCAAGGG +
Preference number: 2 (lower is better)
Translates to: KNLNALAQTFTTVEVEAESQEGR*EGAMQG
Trigger: CCCTTGCATGGCTCCCTCTCACCTTCCTTCCTGGGA...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR TCA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAAGACCAGGGTGGCCTTaGACTCAGAAATCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: CLPITGITAACHYTFHFLRPGWP*TQKSAC
Trigger: GCAGGCAGATTTCTGAGTTCAAGGCCACCCTGGTCT...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CCA 90 bp GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCACATAGATGTGTTTATTaGTGGGTTATTTGCCAGTGT +
Preference number: 2 (lower is better)
Translates to: VVELSWTLPGRKVRGSHAHRCVY*WVICQC
Trigger: ACACTGGCAAATAACCCACCAATAAACACATCTATG...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CCA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAGTGGTGGAACTTTCCTaGACCCTCCCAGGAAGGAAG +
Preference number: 2 (lower is better)
Translates to: CLPITGITAACHYTFHFLVVELS*TLPGRK
Trigger: CTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CCA 90 bp AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCCTATATAGTCCAGGCTaGCCTTGGGTTCTTAATGCT +
Preference number: 2 (lower is better)
Translates to: NSDLSLLQRLRRPYCTTALYSPG*PWVLNA
Trigger: AGCATTAAGAACCCAAGGCCAGCCTGGACTATATAG...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR GCA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTACTGGAATTACAGGGGTaGACCACCACACCTAGCATT +
Preference number: 2 (lower is better)
Translates to: CLPITGITAACHYTFHFLLELQG*TTTPSI
Trigger: AATGCTAGGTGTGGTGGTGCACCCCTGTAATTCCAG...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CCA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAAGCATGATCTTGGATTaGGAGTCACGAGCCAAGGGA +
Preference number: 2 (lower is better)
Translates to: CLPITGITAACHYTFHFLSMILD*ESRAKG
Trigger: TCCCTTGGCTCGTGACTCCCAATCCAAGATCATGCT...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR GCA 90 bp AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCTTTGCTTTGGTGTTCTaGCTACCAACTAAACATCTG +
Preference number: 2 (lower is better)
Translates to: NSDLSLLQRLRRPYCTTAFALVF*LPTKHL
Trigger: CAGATGTTTAGTTGGTAGGCAGAACACCAAAGCAAA...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR GCA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTACCCATTTGTGTTTTGTaGTTCTTCTCCCGGTCATGG +
Preference number: 2 (lower is better)
Translates to: CLPITGITAACHYTFHFLPICVL*FFSRSW
Trigger: CCATGACCGGGAGAAGAAGCACAAAACACAAATGGG...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR GCA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAGACGTCACTAGTGAGTaGAAAAGAAGTGCTCCCCTT +
Preference number: 2 (lower is better)
Translates to: CLPITGITAACHYTFHFLDVTSE*KRSAPL
Trigger: AAGGGGAGCACTTCTTTTGCACTCACTAGTGACGTC...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CCA 90 bp CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATTTCCAATTTTATCATTaGAAAGCACTTGGGAGAGAG +
Preference number: 2 (lower is better)
Translates to: PKDRILQTGSPYLPLLCNFQFYH*KALGRE
Trigger: CTCTCTCCCAAGTGCTTTCCAATGATAAAATTGGAA...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CAA 90 bp TTCACCTTAATTTTACAAGCTAAGCAATTTTACCTGAGCCCTGTCTaGCATGCTGCTTGGAGAGACCTGTGCTACCCTGTGGCTTACTTC +
Preference number: 2 (lower is better)
Translates to: FTLILQAKQFYLSPV*HAAWRDLCYPVAYF
Trigger: GAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCAGCATGCAAGACAGGGCTCAGGTAAAATTGCTTAGCTTGTAAAATTAAGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR TCA 90 bp AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTATTCCATTCCAGCCTTaGCAAGGCAAGAGGAGAGGC +
Preference number: 2 (lower is better)
Translates to: NLNLNFQLSTHCWAPKGSIPFQP*QGKRRG
Trigger: GCCTCTCCTCTTGCCTTGTCAAGGCTGGAATGGAAT...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR TCA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAGTTAGCATAGTCAAATaGCTTGGAAGCCTAACCCTC +
Preference number: 2 (lower is better)
Translates to: CLPITGITAACHYTFHFLVSIVK*LGSLTL
Trigger: GAGGGTTAGGCTTCCAAGTCATTTGACTATGCTAAC...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR TCA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTACTGGGAGAGTCACCGTaGATCAGTTTTGTTACAACA +
Preference number: 2 (lower is better)
Translates to: CLPITGITAACHYTFHFLLGESP*ISFVTT
Trigger: TGTTGTAACAAAACTGATTCACGGTGACTCTCCCAG...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR GCA 90 bp CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATAACAAAGAACCTGAATaGTTTAGCTCAAACCTTTAC +
Preference number: 2 (lower is better)
Translates to: PKDRILQTGSPYLPLLCNNKEPE*FSSNLY
Trigger: GTAAAGGTTTGAGCTAAAGCATTCAGGTTCTTTGTT...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR GCA 90 bp AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTCTGTGTAGCCCTGGCTaGTTCCTGAGTGCTGGAATT +
Preference number: 2 (lower is better)
Translates to: NLNLNFQLSTHCWAPKGSLCSPG*FLSAGI
Trigger: AATTCCAGCACTCAGGAAGCAGCCAGGGCTACACAG...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR GCA 90 bp AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTTTGAACTCAGAAATCTaGCTGCCTCTGCCTCCCGAG +
Preference number: 2 (lower is better)
Translates to: NLNLNFQLSTHCWAPKGSLNSEI*LPLPPE
Trigger: CTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCAA...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CCA 90 bp AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTTTCTTCTCCCGGTCATaGTTAACTGTCCCGGGCTCT +
Preference number: 2 (lower is better)
Translates to: NLNLNFQLSTHCWAPKGSFFSRS*LTVPGS
Trigger: AGAGCCCGGGACAGTTAACCATGACCGGGAGAAGAA...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CCA 90 bp AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGGACCACAAGAAAATGTaGGGCTGGAGAGATGGCTCA +
Preference number: 2 (lower is better)
Translates to: KNLNALAQTFTTVEVEAEDHKKM*GWRDGS
Trigger: TGAGCCATCTCTCCAGCCCCACATTTTCTTGTGGTC...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR TCA 90 bp AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTCCCTCATATTTTTCCTaGGGTCCCACTAGTTCCAGC +
Preference number: 2 (lower is better)
Translates to: NLNLNFQLSTHCWAPKGSPSYFS*GPTSSS
Trigger: GCTGGAACTAGTGGGACCTCAGGAAAAATATGAGGG...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR GCA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTACTTGAACATTTCATGTaGATCTGTCTCCTCTCTCCT +
Preference number: 2 (lower is better)
Translates to: CLPITGITAACHYTFHFLLEHFM*ICLLSP
Trigger: AGGAGAGAGGAGACAGATGCACATGAAATGTTCAAG...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CCA 90 bp AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGAAGAAAATGTGGGGCTaGAGAGATGGCTCAGTGGTT +
Preference number: 2 (lower is better)
Translates to: KNLNALAQTFTTVEVEAEKKMWG*RDGSVV
Trigger: AACCACTGAGCCATCTCTCCAGCCCCACATTTTCTT...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CCA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAAAACCTTTACAACTGTaGAAGTTGAGGCAGAGGTCA +
Preference number: 2 (lower is better)
Translates to: CLPITGITAACHYTFHFLKPLQL*KLRQRS
Trigger: TGACCTCTGCCTCAACTTCCACAGTTGTAAAGGTTT...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CCA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTATTCTGCCCTCCAGTGTaGGCTTTGATACAAAGAATA +
Preference number: 2 (lower is better)
Translates to: CLPITGITAACHYTFHFLFCPPV*ALIQRI
Trigger: TATTCTTTGTATCAAAGCCCACACTGGAGGGCAGAA...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR GCA 90 bp GCAGAGGTCAATCAGCATGATCTTGGATTGGGAGTCACGAGCCAAGGGAAAAAGCTGTGTCCGTTCATATaGTGTCATTATTTTATAGTC +
Preference number: 2 (lower is better)
Translates to: AEVNQHDLGLGVTSQGKKLCPFI*CHYFIV
Trigger: GACTATAAAATAATGACAGCATATGAACGGACACAG...CTTTTTCCCTTGGCTCGTGACTCCCAATCCAAGATCATGCTGATTGACCTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR GCA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAGTTTTCTTGGATCTTTaGAACTGGAACTTTGGGGAT +
Preference number: 2 (lower is better)
Translates to: CLPITGITAACHYTFHFLVFLDL*NWNFGD
Trigger: ATCCCCAAAGTTCCAGTTGCAAAGATCCAAGAAAAC...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR TCA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTATATGATTACTTTACCTaGAAAGTAGAAGCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: CLPITGITAACHYTFHFLYDYFT*KVEAVS
Trigger: GGACACAGCTTCTACTTTTCAGGTAAAGTAATCATA...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR GCA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTATCTCTTGGCAACTTGTaGTTTTATGCAAATAGCATG +
Preference number: 2 (lower is better)
Translates to: CLPITGITAACHYTFHFLSLGNL*FYANSM
Trigger: CATGCTATTTGCATAAAAGCACAAGTTGCCAAGAGA...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CCA 90 bp CCACATGGTGGCTCACAACCATTCATAATGGAATCTGACTCCCTCTTCTGGAGTAGATGTGTTTATTGGTaGGTTATTTGCCAGTGTTTT +
Preference number: 2 (lower is better)
Translates to: PHGGSQPFIMESDSLFWSRCVYW*VICQCF
Trigger: AAAACACTGGCAAATAACCCACCAATAAACACATCT...ACTCCAGAAGAGGGAGTCAGATTCCATTATGAATGGTTGTGAGCCACCATGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CCA 90 bp AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTCTCTCTCCCTTCTCTTaGCAACTTGTGCTTTTATGC +
Preference number: 2 (lower is better)
Translates to: NLNLNFQLSTHCWAPKGSLSPFS*QLVLLC
Trigger: GCATAAAAGCACAAGTTGCCAAGAGAAGGGAGAGAG...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CAA 90 bp CATCACCTTTCAGTTATAATGGCCTTCTGCCCTCCAGTGTGGGCTTaGATACAAAGAATATTATTACTAATTTGCCTCAGTGATTTAGTT +
Preference number: 2 (lower is better)
Translates to: HHLSVIMAFCPPVWA*IQRILLLICLSDLV
Trigger: AACTAAATCACTGAGGCAAATTAGTAATAATATTCTTTGTATCAAAGCCCACACTGGAGGGCAGAAGGCCATTATAACTGAAAGGTGATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR GCA 72 bp CTTCTTCTCCCGGTCATGGTTAACTGTCCCGGGCTCTaGGCTTCCCATCTGTCGTCCCTAGTGCACGCGCCC +
Preference number: 3 (lower is better)
Translates to: LLLPVMVNCPGL*ASHLSSLVHAP
Trigger: GGGCGCGTGCACTAGGGACGACAGATGGGAAGCGCAGAGCCCGGGACAGTTAACCATGACCGGGAGAAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR GCA 72 bp CCTGCCTCTGCCTCCCGAGTGTTGGGATTAAAGGCGTaGGCCACCATGGCGCTCCTGGTCTTTTTCTTTTGG +
Preference number: 3 (lower is better)
Translates to: PASASRVLGLKA*ATMALLVFFFW
Trigger: CCAAAAGAAAAAGACCAGGAGCGCCATGGTGGCGCACGCCTTTAATCCCAACACTCGGGAGGCAGAGGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CCA 72 bp CCACCGCCCACCACCAGGCTCTCTGGGGCAGATCCTTaGCATGTTCATAACCACTGTCCTGTTGGGTACTTC +
Preference number: 3 (lower is better)
Translates to: PPPTTRLSGADP*HVHNHCPVGYF
Trigger: GAAGTACCCAACAGGACAGTGGTTATGAACATGCCAAGGATCTGCCCCAGAGAGCCTGGTGGTGGGCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR TCA 72 bp CTGGCTGTTCTGCAACTCTGTAGACCAGGCTGGCCTTaGACTCAGTGGTCTGCACATGTCACCATGCCTAGC +
Preference number: 3 (lower is better)
Translates to: LAVLQLCRPGWP*TQWSAHVTMPS
Trigger: GCTAGGCATGGTGACATGTGCAGACCACTGAGTTCAAGGCCAGCCTGGTCTACAGAGTTGCAGAACAGCCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR GCA 72 bp CTGAGCCCTGTCTTGCATGCTGCTTGGAGAGACCTGTaGTACCCTGTGGCTTACTTCCCCAAACCATGTGGA +
Preference number: 3 (lower is better)
Translates to: LSPVLHAAWRDL*YPVAYFPKPCG
Trigger: TCCACATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCAGCATGCAAGACAGGGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR GCA 72 bp CATTCCAGCCTTGACAAGGCAAGAGGAGAGGCAATATaGACACGAGGTGGTGGAACTTTCCTGGACCCTCCC +
Preference number: 3 (lower is better)
Translates to: HSSLDKARGEAI*TRGGGTFLDPP
Trigger: GGGAGGGTCCAGGAAAGTTCCACCACCTCGTGTGCATATTGCCTCTCCTCTTGCCTTGTCAAGGCTGGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CCA 72 bp CTGTGGCTGTGCACACACGCTTGTGACACTGGCACTTaGGAAGCAGACAGGAGGGTCATAAGTTCAAGGCCA +
Preference number: 3 (lower is better)
Translates to: LWLCTHACDTGT*EADRRVISSRP
Trigger: TGGCCTTGAACTTATGACCCTCCTGTCTGCTTCCCAAGTGCCAGTGTCACAAGCGTGTGTGCACAGCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CCA 72 bp CTAGGACCACAGACAGATGTCACCGTGCCTGGCCTCTaGCTTTGCTCTTTGGGGGAGTTTCTCTTCCTTCCT +
Preference number: 3 (lower is better)
Translates to: LGPQTDVTVPGL*LCSLGEFLFLP
Trigger: AGGAAGGAAGAGAAACTCCCCCAAAGAGCAAAGCCAGAGGCCAGGCACGGTGACATCTGTCTGTGGTCCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR GCA 72 bp CCACAGACAGATGTCACCGTGCCTGGCCTCTGGCTTTaGTCTTTGGGGGAGTTTCTCTTCCTTCCTCTCTTT +
Preference number: 3 (lower is better)
Translates to: PQTDVTVPGLWL*SLGEFLFLPLF
Trigger: AAAGAGAGGAAGGAAGAGAAACTCCCCCAAAGAGCAAAGCCAGAGGCCAGGCACGGTGACATCTGTCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CCA 72 bp GAGCCCATTTGTGTTTTGTGCTTCTTCTCCCGGTCATaGTTAACTGTCCCGGGCTCTGCGCTTCCCATCTGT +
Preference number: 3 (lower is better)
Translates to: EPICVLCFFSRS*LTVPGSALPIC
Trigger: ACAGATGGGAAGCGCAGAGCCCGGGACAGTTAACCATGACCGGGAGAAGAAGCACAAAACACAAATGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CAA 90 bp GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCATCTCTCTCCCTTCTCTaGGCAACTTGTGCTTTTATG +
Preference number: 3 (lower is better)
Translates to: VVELSWTLPGRKVRGSHASLSLL*ATCAFM
Trigger: CATAAAAGCACAAGTTGCCAAGAGAAGGGAGAGAGA...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CAA 90 bp GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCATGCTCAAGAGCCCATTaGTGTTTTGTGCTTCTTCTC +
Preference number: 3 (lower is better)
Translates to: VVELSWTLPGRKVRGSHACSRAH*CFVLLL
Trigger: GAGAAGAAGCACAAAACACAAATGGGCTCTTGAGCA...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CAA 90 bp AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCTGTCTTGCATGCTGCTaGGAGAGACCTGTGCTACCC +
Preference number: 3 (lower is better)
Translates to: NSDLSLLQRLRRPYCTTACLACC*ERPVLP
Trigger: GGGTAGCACAGGTCTCTCCAAGCAGCATGCAAGACA...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR TCA 72 bp GGCTTTCTACGCTCAGACTCTCCCTCATATTTTTCCTaGGGTCCCACTAGTTCCAGCCACCTTACCAGGCAC +
Preference number: 3 (lower is better)
Translates to: GFLRSDSPSYFS*GPTSSSHLTRH
Trigger: GTGCCTGGTAAGGTGGCTGGAACTAGTGGGACCTCAGGAAAAATATGAGGGAGAGTCTGAGCGTAGAAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CCA 72 bp TCTTGCATGCTGCTTGGAGAGACCTGTGCTACCCTGTaGCTTACTTCCCCAAACCATGTGGACTACGTAGGA +
Preference number: 3 (lower is better)
Translates to: SCMLLGETCATL*LTSPNHVDYVG
Trigger: TCCTACGTAGTCCACATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCAGCATGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CCA 72 bp AAGCAATTTTACCTGAGCCCTGTCTTGCATGCTGCTTaGAGAGACCTGTGCTACCCTGTGGCTTACTTCCCC +
Preference number: 3 (lower is better)
Translates to: KQFYLSPVLHAA*RDLCYPVAYFP
Trigger: GGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCAGCATGCAAGACAGGGCTCAGGTAAAATTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR TCA 72 bp AGACAGGAGGGTCATAAGTTCAAGGCCAGGCTGGGCTaGGGCCCTGTCTTCAAAACAAAACAAATCCCTAGC +
Preference number: 3 (lower is better)
Translates to: RQEGHKFKARLG*GPVFKTKQIPS
Trigger: GCTAGGGATTTGTTTTGTTTTGAAGACAGGGCCTCAGCCCAGCCTGGCCTTGAACTTATGACCCTCCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR TCA 72 bp GGAGCACAGCCTCACGTGATCCTAAGTGTCCTATGCTaGAAGGCACTTCTTTGTAGATGGAGTGGAACGTCA +
Preference number: 3 (lower is better)
Translates to: GAQPHVILSVLC*KALLCRWSGTS
Trigger: TGACGTTCCACTCCATCTACAAAGAAGTGCCTTTCAGCATAGGACACTTAGGATCACGTGAGGCTGTGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR GCA 72 bp AGCCTGCCTCTGCCTCCCAATTACTGGGATTACAGCTaGGTGTCACTACACGTTTCATTTCCTAAGATAGGG +
Preference number: 3 (lower is better)
Translates to: SLPLPPNYWDYS*VSLHVSFPKIG
Trigger: CCCTATCTTAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCAGAGGCAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR GCA 72 bp ACTTTAAAAATATGGAAAATTAGCTGGGCATGGTGGTaGACTGTTGCAGTCCCAGCACTCCCAAAGGAGGGC +
Preference number: 3 (lower is better)
Translates to: TLKIWKISWAWW*TVAVPALPKEG
Trigger: GCCCTCCTTTGGGAGTGCTGGGACTGCAACAGTGCACCACCATGCCCAGCTAATTTTCCATATTTTTAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR GCA 72 bp GATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTaGACCACTGCCACACAGAAAAAGACAAAACTCAAG +
Preference number: 3 (lower is better)
Translates to: DLSLLQRLRRPY*TTATQKKTKLK
Trigger: CTTGAGTTTTGTCTTTTTCTGTGTGGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CAA 90 bp TGCTTGGAGAGACCTGTGCTACCCTGTGGCTTACTTCCCCAAACCATGTGGACTTTCAGTGCACCTCACTaGCCTAATAAGTTTGTCAAT +
Preference number: 3 (lower is better)
Translates to: CLERPVLPCGLLPQTMWTFSAPH*PNKFVN
Trigger: ATTGACAAACTTATTAGGCAAGTGAGGTGCACTGAA...AGTCCACATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CAA 90 bp AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCCCTTCTCTTGGCAACTaGTGCTTTTATGCAAATAGC +
Preference number: 3 (lower is better)
Translates to: NSDLSLLQRLRRPYCTTAPSLGN*CFYANS
Trigger: GCTATTTGCATAAAAGCACAAGTTGCCAAGAGAAGG...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CAA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAGAGCCCATTTGTGTTTaGTGCTTCTTCTCCCGGTCA +
Preference number: 3 (lower is better)
Translates to: CLPITGITAACHYTFHFLEPICV*CFFSRS
Trigger: TGACCGGGAGAAGAAGCACAAAACACAAATGGGCTC...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CAA 90 bp AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGTACCTGAGCCCTGTCTaGCATGCTGCTTGGAGAGAC +
Preference number: 3 (lower is better)
Translates to: KNLNALAQTFTTVEVEAEYLSPV*HAAWRD
Trigger: GTCTCTCCAAGCAGCATGCAAGACAGGGCTCAGGTA...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CAA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTATGGGGGCTTGCTTGCTaGTTTTCTTTCCCTTCCTTC +
Preference number: 3 (lower is better)
Translates to: CLPITGITAACHYTFHFLWGLAC*FSFPSF
Trigger: GAAGGAAGGGAAAGAAAACAAGCAAGCAAGCCCCCA...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR TCA 72 bp ACCACATGGTGGCTCACAACCATTCATAATGGAATCTaGCTCCCTCTTCTGGAGTGTCTGAAGACAGCTACA +
Preference number: 3 (lower is better)
Translates to: TTWWLTTIHNGI*LPLLECLKTAT
Trigger: TGTAGCTGTCTTCAGACACTCCAGAAGAGGGAGTCAGATTCCATTATGAATGGTTGTGAGCCACCATGTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CCA 72 bp TTAAATAACGATGGCTGCATCCATCAGTGTGATGGATaGGACGTCACTAGTGAGTGCAAAAGAAGTGCTCCC +
Preference number: 3 (lower is better)
Translates to: LNNDGCIHQCDG*DVTSECKRSAP
Trigger: GGGAGCACTTCTTTTGCACTCACTAGTGACGTCCCATCCATCACACTGATGGATGCAGCCATCGTTATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR GCA 72 bp ATCCATCAGTGTGATGGATGGGACGTCACTAGTGAGTaGAAAAGAAGTGCTCCCCTTCAAACAAGACAGTTT +
Preference number: 3 (lower is better)
Translates to: IHQCDGWDVTSE*KRSAPLQTRQF
Trigger: AAACTGTCTTGTTTGAAGGGGAGCACTTCTTTTGCACTCACTAGTGACGTCCCATCCATCACACTGATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CCA 72 bp ACAGTACTGAAGCAATGGATGCTGGCTTTCCTAATCTaGGGTGTAAATGGCAAATGCTTAACAAGGATGGTG +
Preference number: 3 (lower is better)
Translates to: TVLKQWMLAFLI*GVNGKCLTRMV
Trigger: CACCATCCTTGTTAAGCATTTGCCATTTACACCCCAGATTAGGAAAGCCAGCATCCATTGCTTCAGTACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CCA 72 bp GCCTTCCCTGATGATCAGCACATTGACACATTTGAATaGACCCAAGTACTGAATTGTATGTCCACATCACCT +
Preference number: 3 (lower is better)
Translates to: AFPDDQHIDTFE*TQVLNCMSTSP
Trigger: AGGTGATGTGGACATACAATTCAGTACTTGGGTCCATTCAAATGTGTCAATGTGCTGATCATCAGGGAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CAA 90 bp AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTATAACCACTGTCCTGTaGGGTACTTCACAGTCACAG +
Preference number: 3 (lower is better)
Translates to: NLNLNFQLSTHCWAPKGSITTVL*GTSQSQ
Trigger: CTGTGACTGTGAAGTACCCAACAGGACAGTGGTTAT...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR TCA 72 bp TGGAAAGCACTTGGGAGAGAGGATGGTGAACACATTTaGGGAACTGATCAAAACAGATCAATAGGATTAGGG +
Preference number: 3 (lower is better)
Translates to: WKALGREDGEHI*GTDQNRSIGLG
Trigger: CCCTAATCCTATTGATCTGTTTTGATCAGTTCCTCAAATGTGTTCACCATCCTCTCTCCCAAGTGCTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CAA 90 bp AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTCATAGCCTTTTTGCTTaGGTGTTCTGCCTACCAACT +
Preference number: 3 (lower is better)
Translates to: NLNLNFQLSTHCWAPKGSHSLFA*VFCLPT
Trigger: AGTTGGTAGGCAGAACACCAAAGCAAAAAGGCTATG...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CAA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTATCCTTACACTACTCTTaGATGTCTGGCTTTGTTAAA +
Preference number: 3 (lower is better)
Translates to: CLPITGITAACHYTFHFLSLHYS*MSGFVK
Trigger: TTTAACAAAGCCAGACATCAAAGAGTAGTGTAAGGA...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CAA 90 bp AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTTTGAGTCCTAGCCTTTaGCTGTCTTGTTTCTACCTC +
Preference number: 3 (lower is better)
Translates to: NLNLNFQLSTHCWAPKGSLSPSL*LSCFYL
Trigger: GAGGTAGAAACAAGACAGCAAAAGGCTAGGACTCAA...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CAA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAAACACTGACCAACTTTaGTTTATAAGCAGATGCCTT +
Preference number: 3 (lower is better)
Translates to: CLPITGITAACHYTFHFLNTDQL*FISRCL
Trigger: AAGGCATCTGCTTATAAACAAAAGTTGGTCAGTGTT...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR TCA 72 bp CTTGCTCTTTTCTCGGGGAGATTTGCTCAGGAAATCTaGCTTCTTCAGCTCATTAGTTCCATAACCAATATG +
Preference number: 3 (lower is better)
Translates to: LALFSGRFAQEI*LLQLISSITNM
Trigger: CATATTGGTTATGGAACTAATGAGCTGAAGAAGTCAGATTTCCTGAGCAAATCTCCCCGAGAAAAGAGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR GCA 72 bp GTATGTCCACATCACCTTTCAGTTATAATGGCCTTCTaGCCTCCAGTGTGGGCTTTGATACAAAGAATATTA +
Preference number: 3 (lower is better)
Translates to: VCPHHLSVIMAF*PPVWALIQRIL
Trigger: TAATATTCTTTGTATCAAAGCCCACACTGGAGGGCAGAAGGCCATTATAACTGAAAGGTGATGTGGACATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR GCA 72 bp ATCACAAGTCAACTGCTCTACAAGACAACAACAACATaGTTAGGCTGTAATATAGCTTTGGCACAGAGTAGG +
Preference number: 3 (lower is better)
Translates to: ITSQLLYKTTTT*LGCNIALAQSR
Trigger: CCTACTCTGTGCCAAAGCTATATTACAGCCTAAGCATGTTGTTGTTGTCTTGTAGAGCAGTTGACTTGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CAA 90 bp AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGCCCTTCAGACATAACTaGAACATTTCATGTGCATCT +
Preference number: 3 (lower is better)
Translates to: KNLNALAQTFTTVEVEAEPFRHN*NISCAS
Trigger: AGATGCACATGAAATGTTCAAGTTATGTCTGAAGGG...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CAA 90 bp AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTATTTCTCTAGGGTCTTaGCTGTTTCCAGAAGGGAAA +
Preference number: 3 (lower is better)
Translates to: NLNLNFQLSTHCWAPKGSISLGS*LFPEGK
Trigger: TTTCCCTTCTGGAAACAGCAAAGACCCTAGAGAAAT...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CCA 72 bp GAAACAACTCATTTAATGACTCGTGACAATCAAGTGTaGCTTTCTACGCTCAGACTCTCCCTCATATTTTTC +
Preference number: 3 (lower is better)
Translates to: ETTHLMTRDNQV*LSTLRLSLIFF
Trigger: GAAAAATATGAGGGAGAGTCTGAGCGTAGAAAGCCACACTTGATTGTCACGAGTCATTAAATGAGTTGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CCA 72 bp AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTaGGCCCCCAAAGGAAGTAACTATCCTGCCAAACTT +
Preference number: 3 (lower is better)
Translates to: NLNLNFQLSTHC*APKGSNYPAKL
Trigger: AAGTTTGGCAGGATAGTTACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CCA 72 bp TTCTTTTGCAATAAGACTGCCTTTGAGGAGTTTGCCTaGAAATCTACAGATACGTTCATAGATGGGACTATC +
Preference number: 3 (lower is better)
Translates to: FFCNKTAFEEFA*KSTDTFIDGTI
Trigger: GATAGTCCCATCTATGAACGTATCTGTAGATTTCCAGGCAAACTCCTCAAAGGCAGTCTTATTGCAAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR-3UTR CAA 90 bp AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTCATTTGCTTGCGAAATaGTTGTTAGCACACACTAAA +
Preference number: 3 (lower is better)
Translates to: NLNLNFQLSTHCWAPKGSHLLAK*LLAHTK
Trigger: TTTAGTGTGTGCTAACAACAATTTCGCAAGCAAATG...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR TCA 72 bp GGAATGGAACAGACATTATCATCAAACATACCGTTCTaGAGCAAGTGTCATAGCTGGGTAAAGCTAGATTAT +
Preference number: 3 (lower is better)
Translates to: GMEQTLSSNIPF*SKCHSWVKLDY
Trigger: ATAATCTAGCTTTACCCAGCTATGACACTTGCTTCAGAACGGTATGTTTGATGATAATGTCTGTTCCATTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR GCA 72 bp AGAACCTTCTCCACTGTTCTTTTACTTAGAAGACAGTaGATACTGTTCTCCTTAAAGCATTACTTAACGACC +
Preference number: 3 (lower is better)
Translates to: RTFSTVLLLRRQ*ILFSLKHYLTT
Trigger: GGTCGTTAAGTAATGCTTTAAGGAGAACAGTATGCACTGTCTTCTAAGTAAAAGAACAGTGGAGAAGGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CCA 72 bp AATACCACGAGAGCAAAGAGCAATGCTTTTAAACTGTaGTCCACAATCAAAGCCTTACTTTTCACTACAGAT +
Preference number: 3 (lower is better)
Translates to: NTTRAKSNAFKL*STIKALLFTTD
Trigger: ATCTGTAGTGAAAAGTAAGGCTTTGATTGTGGACCACAGTTTAAAAGCATTGCTCTTTGCTCTCGTGGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CCA 72 bp CATTTCCATAAGAGCTACATTATCTTGTTAAGGAACTaGCCTTGGATTTTCTTTCTCGGTACCCATCTCTTT +
Preference number: 3 (lower is better)
Translates to: HFHKSYIILLRN*PWIFFLGTHLF
Trigger: AAAGAGATGGGTACCGAGAAAGAAAATCCAAGGCCAGTTCCTTAACAAGATAATGTAGCTCTTATGGAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR TCA 72 bp TTGTTTATTAAGAAATTGCAGAAATGGGCCTTCAAATaGAGAGTGTCACGAATAGAGGGAAAAGATGCTATA +
Preference number: 3 (lower is better)
Translates to: LFIKKLQKWAFK*RVSRIEGKDAI
Trigger: TATAGCATCTTTTCCCTCTATTCGTGACACTCTTCATTTGAAGGCCCATTTCTGCAATTTCTTAATAAACAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR TCA 72 bp AACAAATCCCTAGCTCTATCTACTAACTTGATAGAGTaGAACTGTTGGTTTAAGGAGAAAATACAACAGTCT +
Preference number: 3 (lower is better)
Translates to: NKSLALSTNLIE*NCWFKEKIQQS
Trigger: AGACTGTTGTATTTTCTCCTTAAACCAACAGTTTCACTCTATCAAGTTAGTAGATAGAGCTAGGGATTTGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CAA 72 bp GAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGTaGGGATTAAAGGCGTGCGCCACCATGGCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: ELRNLPASASRV*GLKACATMALL
Trigger: CAGGAGCGCCATGGTGGCGCACGCCTTTAATCCCAACACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CCA 90 bp GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCAAAGCCCCACTCTCTTTaGTTGTTGAGCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VVELSWTLPGRKVRGSHAKPHSL*LLSCCR
Trigger: CCTGCAGCAGCTCAACAACCAAAGAGAGTGGGGCTT...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR GCA 90 bp GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCAGCTGAGGTTCAGTTGTaGAGTACTGTGCTGATGGTT +
Preference number: 4 (lower is better)
Translates to: VVELSWTLPGRKVRGSHAAEVQL*STVLMV
Trigger: AACCATCAGCACAGTACTGCACAACTGAACCTCAGC...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR GCA 90 bp CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATTCTTGCTGCTCTGCCTaGTGGAGGCAGAAGACGAAC +
Preference number: 4 (lower is better)
Translates to: PKDRILQTGSPYLPLLCNSCCSA*WRQKTN
Trigger: GTTCGTCTTCTGCCTCCAGCAGGCAGAGCAGCAAGA...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CAA 72 bp ACCACAGACAGATGTCACCGTGCCTGGCCTCTGGCTTaGCTCTTTGGGGGAGTTTCTCTTCCTTCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: TTDRCHRAWPLA*LFGGVSLPSSL
Trigger: AAGAGAGGAAGGAAGAGAAACTCCCCCAAAGAGCAAAGCCAGAGGCCAGGCACGGTGACATCTGTCTGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR GCA 90 bp CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATCCCCAAAAATCATCTTaGTGCTCTGCCTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PKDRILQTGSPYLPLLCNPQKSS*CSACWR
Trigger: CCTCCAGCAGGCAGAGCAGCAAGATGATTTTTGGGG...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR GCA 90 bp TGCTTGGAGAGACCTGTGCTACCCTGTGGCTTACTTCCCCAAACCATGTGGACTTCCCCACCAGACAGGTaGGAGATCATATGCCGTACA +
Preference number: 4 (lower is better)
Translates to: CLERPVLPCGLLPQTMWTSPPDR*EIICRT
Trigger: TGTACGGCATATGATCTCGCACCTGTCTGGTGGGGA...AGTCCACATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CCA 90 bp GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCATTGTGTAGACGCAACTaGCGCTCTCTTAAAAACTGC +
Preference number: 4 (lower is better)
Translates to: VVELSWTLPGRKVRGSHALCRRN*RSLKNC
Trigger: GCAGTTTTTAAGAGAGCGCCAGTTGCGTCTACACAA...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR GCA 90 bp CCACATGGTGGCTCACAACCATTCATAATGGAATCTGACTCCCTCTTCTGGAGTGCTGCAGGACATAGCTaGTGTGGCTGGGCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: PHGGSQPFIMESDSLFWSAAGHS*CGWALP
Trigger: TGGCAAAGCCCAGCCACAGCAGCTATGTCCTGCAGC...ACTCCAGAAGAGGGAGTCAGATTCCATTATGAATGGTTGTGAGCCACCATGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR GCA 90 bp CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATCAAAAATCATCTTGCTaGTCTGCCTGCTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PKDRILQTGSPYLPLLCNQKSSC*SACWRQ
Trigger: CTGCCTCCAGCAGGCAGAGCAGCAAGATGATTTTTG...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CCA 90 bp TGCTTGGAGAGACCTGTGCTACCCTGTGGCTTACTTCCCCAAACCATGTGGACTCATCAGGCGCCTGGTTaGCGTCTTCTCTGTATTTGT +
Preference number: 4 (lower is better)
Translates to: CLERPVLPCGLLPQTMWTHQAPG*RLLCIC
Trigger: ACAAATACAGAGAAGACGCCAACCAGGCGCCTGATG...AGTCCACATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CCA 90 bp GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCACCCTTGAACATATCTTaGTCTAGGCAGCTAGACATA +
Preference number: 4 (lower is better)
Translates to: VVELSWTLPGRKVRGSHAPLNIS*SRQLDI
Trigger: TATGTCTAGCTGCCTAGACCAAGATATGTTCAAGGG...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR TCA 90 bp GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCATTTCGGAAGTTTCCTTaGTCACAAATGGAACAGACA +
Preference number: 4 (lower is better)
Translates to: VVELSWTLPGRKVRGSHAFRKFP*SQMEQT
Trigger: TGTCTGTTCCATTTGTGATCAAGGAAACTTCCGAAA...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR GCA 90 bp CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATATTGCCACTTTGAACTaGTCGAAACTGGAAGGAGCG +
Preference number: 4 (lower is better)
Translates to: PKDRILQTGSPYLPLLCNIATLN*SKLEGA
Trigger: CGCTCCTTCCAGTTTCGAGCAGTTCAAAGTGGCAAT...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR GCA 90 bp GCAGAGGTCAATCAGCATGATCTTGGATTGGGAGTCACGAGCCAAGGGAAAAAGATCATCTTGCTGCTCTaGCTGCTGGAGGCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: AEVNQHDLGLGVTSQGKKIILLL*LLEAED
Trigger: GTCTTCTGCCTCCAGCAGGCAGAGCAGCAAGATGAT...CTTTTTCCCTTGGCTCGTGACTCCCAATCCAAGATCATGCTGATTGACCTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CCA 90 bp AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCCCACACGTGTACAGATaGACATCCATATGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: NSDLSLLQRLRRPYCTTAPHVYR*TSICCS
Trigger: GGAGCAGCATATGGATGTCCATCTGTACACGTGTGG...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR TCA 90 bp TGCTTGGAGAGACCTGTGCTACCCTGTGGCTTACTTCCCCAAACCATGTGGACTAGTTCATTGCCACTTTaGACTGCTCGAAACTGGAAG +
Preference number: 4 (lower is better)
Translates to: CLERPVLPCGLLPQTMWTSSLPL*TARNWK
Trigger: CTTCCAGTTTCGAGCAGTTCAAAGTGGCAATGAACT...AGTCCACATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR TCA 90 bp GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCACAGCAAGTTCAGCTTTaGTGTTACTATCTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: VVELSWTLPGRKVRGSHAQQVQL*CYYLFH
Trigger: ATGGAAAAGATAGTAACATCAAAGCTGAACTTGCTG...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR TCA 90 bp AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCGAAGCTGTCTGCCCTTaGCAAGTATCTGTCCACATT +
Preference number: 4 (lower is better)
Translates to: NSDLSLLQRLRRPYCTTAEAVCP*QVSVHI
Trigger: AATGTGGACAGATACTTGTCAAGGGCAGACAGCTTC...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR GCA 90 bp TGCTTGGAGAGACCTGTGCTACCCTGTGGCTTACTTCCCCAAACCATGTGGACTCTGGAGGTAGTTCATTaGCACTTTGAACTGCTCGAA +
Preference number: 4 (lower is better)
Translates to: CLERPVLPCGLLPQTMWTLEVVH*HFELLE
Trigger: TTCGAGCAGTTCAAAGTGGCAATGAACTACCTCCAG...AGTCCACATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR GCA 90 bp GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCAGTATTTGTCCGGCTGTaGAGAAAATGTTTTAGAAGA +
Preference number: 4 (lower is better)
Translates to: VVELSWTLPGRKVRGSHAVFVRL*RKCFRR
Trigger: TCTTCTAAAACATTTTCTGCACAGCCGGACAAATAC...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CCA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTATGCTGCTCTGCCTGCTaGAGGCAGAAGACGAACACT +
Preference number: 4 (lower is better)
Translates to: CLPITGITAACHYTFHFLCCSAC*RQKTNT
Trigger: AGTGTTCGTCTTCTGCCTCCAGCAGGCAGAGCAGCA...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CCA 90 bp CCACATGGTGGCTCACAACCATTCATAATGGAATCTGACTCCCTCTTCTGGAGTTATTCACCGTTGAACTaGGCTCCGCACACCACCTGT +
Preference number: 4 (lower is better)
Translates to: PHGGSQPFIMESDSLFWSYSPLN*APHTTC
Trigger: ACAGGTGGTGTGCGGAGCCCAGTTCAACGGTGAATA...ACTCCAGAAGAGGGAGTCAGATTCCATTATGAATGGTTGTGAGCCACCATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CCA 90 bp GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCAATAGTATCTATAAAATaGCTCCTCGGGTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: VVELSWTLPGRKVRGSHAIVSIK*LLGFIF
Trigger: GAAGATGAACCCGAGGAGCCATTTTATAGATACTAT...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CCA 90 bp CCACATGGTGGCTCACAACCATTCATAATGGAATCTGACTCCCTCTTCTGGAGTCTGCATCCTCTTGTATaGGGCTGGTGTTATTCGGGG +
Preference number: 4 (lower is better)
Translates to: PHGGSQPFIMESDSLFWSLHPLV*GWCYSG
Trigger: CCCCGAATAACACCAGCCCCATACAAGAGGATGCAG...ACTCCAGAAGAGGGAGTCAGATTCCATTATGAATGGTTGTGAGCCACCATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CAA 72 bp CAAAGTCAGAAGCAGCAGGCAAATTCCATTCCAGCCTaGACAAGGCAAGAGGAGAGGCAATATGCACACGAG +
Preference number: 4 (lower is better)
Translates to: QSQKQQANSIPA*TRQEERQYAHE
Trigger: CTCGTGTGCATATTGCCTCTCCTCTTGCCTTGTCAAGGCTGGAATGGAATTTGCCTGCTGCTTCTGACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CAA 72 bp GGCGTGCGCCACCATGGCGCTCCTGGTCTTTTTCTTTaGGCACTGATTTATCTTTTGTTAGTGACAGGTTCC +
Preference number: 4 (lower is better)
Translates to: GVRHHGAPGLFL*ALIYLLLVTGS
Trigger: GGAACCTGTCACTAACAAAAGATAAATCAGTGCCAAAAGAAAAAGACCAGGAGCGCCATGGTGGCGCACGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR GCA 90 bp AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCACAAGATGCATTCTCTaGATCCTCTTGTATGGGGCT +
Preference number: 4 (lower is better)
Translates to: NSDLSLLQRLRRPYCTTATRCIL*ILLYGA
Trigger: AGCCCCATACAAGAGGATGCAGAGAATGCATCTTGT...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR GCA 90 bp TGCTTGGAGAGACCTGTGCTACCCTGTGGCTTACTTCCCCAAACCATGTGGACTAGACATACCTGGCCATaGCTTTGTGCATATCATTGT +
Preference number: 4 (lower is better)
Translates to: CLERPVLPCGLLPQTMWTRHTWP*LCAYHC
Trigger: ACAATGATATGCACAAAGGCATGGCCAGGTATGTCT...AGTCCACATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CCA 90 bp CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATGCTCTTGTCGTGTTTTaGTATGAGTGTCTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: PKDRILQTGSPYLPLLCNALVVF*YECLLV
Trigger: TACCAACAGACACTCATACCAAAACACGACAAGAGC...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CCA 90 bp AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCTGGAACAGACATACCTaGCCATGCCTTTGTGCATAT +
Preference number: 4 (lower is better)
Translates to: NSDLSLLQRLRRPYCTTAWNRHT*PCLCAY
Trigger: ATATGCACAAAGGCATGGCCAGGTATGTCTGTTCCA...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CAA 72 bp GAAGTTGAGGCAGAGGTCAATCAGCATGATCTTGGATaGGGAGTCACGAGCCAAGGGAAAAAGATAGAAGGG +
Preference number: 4 (lower is better)
Translates to: EVEAEVNQHDLG*GVTSQGKKIEG
Trigger: CCCTTCTATCTTTTTCCCTTGGCTCGTGACTCCCAATCCAAGATCATGCTGATTGACCTCTGCCTCAACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CAA 72 bp AAATATGGAAAATTAGCTGGGCATGGTGGTGCACTGTaGCAGTCCCAGCACTCCCAAAGGAGGGCTAAAAGA +
Preference number: 4 (lower is better)
Translates to: KYGKLAGHGGAL*QSQHSQRRAKR
Trigger: TCTTTTAGCCCTCCTTTGGGAGTGCTGGGACTGCAACAGTGCACCACCATGCCCAGCTAATTTTCCATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR TCA 90 bp AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCTGTGCAGTACTGTGCTaGTGGTTCATGAAAAACATC +
Preference number: 4 (lower is better)
Translates to: NSDLSLLQRLRRPYCTTACAVLC*WFMKNI
Trigger: GATGTTTTTCATGAACCATCAGCACAGTACTGCACA...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR TCA 90 bp GCAGAGGTCAATCAGCATGATCTTGGATTGGGAGTCACGAGCCAAGGGAAAAAGTGTCGTGTTTTGGTATaGGTGTCTGTTGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: AEVNQHDLGLGVTSQGKKCRVLV*VSVGTG
Trigger: ACCTGTACCAACAGACACTCATACCAAAACACGACA...CTTTTTCCCTTGGCTCGTGACTCCCAATCCAAGATCATGCTGATTGACCTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR TCA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTACCTCCTCAGTTATTGTaGGTCCACACAGCTCACAAG +
Preference number: 4 (lower is better)
Translates to: CLPITGITAACHYTFHFLPPQLL*VHTAHK
Trigger: CTTGTGAGCTGTGTGGACTCACAATAACTGAGGAGG...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR GCA 90 bp AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCAGGTGCGAGATCATATaGCGTACATGGTCATGTTTT +
Preference number: 4 (lower is better)
Translates to: NSDLSLLQRLRRPYCTTARCEII*RTWSCF
Trigger: AAAACATGACCATGTACGGCATATGATCTCGCACCT...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CCA 90 bp CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATTGCAGGGATATCTTCTaGCTCCATCTTGATGATAAT +
Preference number: 4 (lower is better)
Translates to: PKDRILQTGSPYLPLLCNCRDIF*LHLDDN
Trigger: ATTATCATCAAGATGGAGCCAGAAGATATCCCTGCA...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR TCA 90 bp GCAGAGGTCAATCAGCATGATCTTGGATTGGGAGTCACGAGCCAAGGGAAAAAGTTATCTTCATGTTGCTaGGGTTCAGTTGTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: AEVNQHDLGLGVTSQGKKLSSCC*GSVVQY
Trigger: GTACTGCACAACTGAACCTCAGCAACATGAAGATAA...CTTTTTCCCTTGGCTCGTGACTCCCAATCCAAGATCATGCTGATTGACCTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR GCA 90 bp TGCTTGGAGAGACCTGTGCTACCCTGTGGCTTACTTCCCCAAACCATGTGGACTTGGACATCCATATGCTaGTCCAGTTGTTCATTATTT +
Preference number: 4 (lower is better)
Translates to: CLERPVLPCGLLPQTMWTWTSIC*SSCSLF
Trigger: AAATAATGAACAACTGGAGCAGCATATGGATGTCCA...AGTCCACATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR GCA 90 bp CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATCCTCAAATTAAACTTTaGTCCACATATTCCACACGT +
Preference number: 4 (lower is better)
Translates to: PKDRILQTGSPYLPLLCNPQIKL*STYSTR
Trigger: ACGTGTGGAATATGTGGAGCAAAGTTTAATTTGAGG...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CAA 72 bp ATTTTACAAGCTAAGCAATTTTACCTGAGCCCTGTCTaGCATGCTGCTTGGAGAGACCTGTGCTACCCTGTG +
Preference number: 4 (lower is better)
Translates to: ILQAKQFYLSPV*HAAWRDLCYPV
Trigger: CACAGGGTAGCACAGGTCTCTCCAAGCAGCATGCAAGACAGGGCTCAGGTAAAATTGCTTAGCTTGTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CAA 72 bp AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAGATaGATTCAGTATGTAGCCCTGGCTGTTCTGCAACTC +
Preference number: 4 (lower is better)
Translates to: REREREREREKR*IQYVALAVLQL
Trigger: GAGTTGCAGAACAGCCAGGGCTACATACTGAATCAATCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR GCA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAACACAGCTCACAAGATaGATTCTCTGCATCCTCTTG +
Preference number: 4 (lower is better)
Translates to: CLPITGITAACHYTFHFLTQLTR*ILCILL
Trigger: CAAGAGGATGCAGAGAATGCATCTTGTGAGCTGTGT...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CCA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAGGTATGAGTGTCTGTTaGTACAGGTCAGCACATGTT +
Preference number: 4 (lower is better)
Translates to: CLPITGITAACHYTFHFLGMSVC*YRSAHV
Trigger: AACATGTGCTGACCTGTACCAACAGACACTCATACC...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CAA 72 bp AACAAAACAAAAGCTGCTCAAGAGCCCATTTGTGTTTaGTGCTTCTTCTCCCGGTCATGGTTAACTGTCCCG +
Preference number: 4 (lower is better)
Translates to: NKTKAAQEPICV*CFFSRSWLTVP
Trigger: CGGGACAGTTAACCATGACCGGGAGAAGAAGCACAAAACACAAATGGGCTCTTGAGCAGCTTTTGTTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR TCA 90 bp AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGCTCTCTCATCCACGCTaGTGGACATACGAGGTTTTA +
Preference number: 4 (lower is better)
Translates to: KNLNALAQTFTTVEVEAELSHPR*WTYEVL
Trigger: TAAAACCTCGTATGTCCATCAGCGTGGATGAGAGAG...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR TCA 90 bp GCAGAGGTCAATCAGCATGATCTTGGATTGGGAGTCACGAGCCAAGGGAAAAAGTTATTTGGGAATATCTaGAAGCAGACCTGGCATATA +
Preference number: 4 (lower is better)
Translates to: AEVNQHDLGLGVTSQGKKLFGNI*KQTWHI
Trigger: TATATGCCAGGTCTGCTTTCAGATATTCCCAAATAA...CTTTTTCCCTTGGCTCGTGACTCCCAATCCAAGATCATGCTGATTGACCTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR GCA 90 bp AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTGGGAAGTTGGCCAACTaGAAAGACTCTTCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: NLNLNFQLSTHCWAPKGSGKLAN*KDSSSG
Trigger: ACCTGAGGAAGAGTCTTTGCAGTTGGCCAACTTCCC...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CAA 72 bp AAGACAACAACAACATGCTTAGGCTGTAATATAGCTTaGGCACAGAGTAGGGACCAGAGAACGGTTCCTAGA +
Preference number: 4 (lower is better)
Translates to: KTTTTCLGCNIA*AQSRDQRTVPR
Trigger: TCTAGGAACCGTTCTCTGGTCCCTACTCTGTGCCAAAGCTATATTACAGCCTAAGCATGTTGTTGTTGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR GCA 90 bp AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTCTGGCCATGCCTTTGTaGATATCATTGTGTAGACGC +
Preference number: 4 (lower is better)
Translates to: NLNLNFQLSTHCWAPKGSLAMPL*ISLCRR
Trigger: GCGTCTACACAATGATATGCACAAAGGCATGGCCAG...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR GCA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAAGATGGACATCCATATaGTGCTCCAGTTGTTCATTA +
Preference number: 4 (lower is better)
Translates to: CLPITGITAACHYTFHFLRWTSI*CSSCSL
Trigger: TAATGAACAACTGGAGCAGCATATGGATGTCCATCT...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CCA 90 bp AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTTTTTCCTGCTTCCAGTaGTCGAGGCTGAATCATCAG +
Preference number: 4 (lower is better)
Translates to: NLNLNFQLSTHCWAPKGSFSCFQ*SRLNHQ
Trigger: CTGATGATTCAGCCTCGACCACTGGAAGCAGGAAAA...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CAA 72 bp AACTCAAGTGGTAACCCTGACCCTAGTCTAGCCTCTTaGCACGTTGGAATTACAGATATAAACTACCACTCA +
Preference number: 4 (lower is better)
Translates to: NSSGNPDPSLAS*HVGITDINYHS
Trigger: TGAGTGGTAGTTTATATCTGTAATTCCAACGTGCAAAGAGGCTAGACTAGGGTCAGGGTTACCACTTGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CAA 72 bp GCGTCATCTCTCACTTCTTTTGCAATAAGACTGCCTTaGAGGAGTTTGCCTGGAAATCTACAGATACGTTCA +
Preference number: 4 (lower is better)
Translates to: ASSLTSFAIRLP*RSLPGNLQIRS
Trigger: TGAACGTATCTGTAGATTTCCAGGCAAACTCCTCAAAGGCAGTCTTATTGCAAAAGAAGTGAGAGATGACGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CCA 90 bp AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGATTCATCATTGTCGGTaGACTCGTTGCAGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: KNLNALAQTFTTVEVEAEIHHCR*TRCSLS
Trigger: AGAAAGACTGCAACGAGTCCACCGACAATGATGAAT...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CCA 90 bp AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTTCAGTTTCAAAACGCTaGCCACAATTAGGACATCGG +
Preference number: 4 (lower is better)
Translates to: NLNLNFQLSTHCWAPKGSSVSKR*PQLGHR
Trigger: CCGATGTCCTAATTGTGGCCAGCGTTTTGAAACTGA...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CCA 90 bp TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAATCATATGCCGTACATaGTCATGTTTTCGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: CLPITGITAACHYTFHFLIICRT*SCFRKF
Trigger: AAACTTCCGAAAACATGACCATGTACGGCATATGAT...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CAA 72 bp CATGTGCATCTGTCTCCTCTCTCCTTACACTACTCTTaGATGTCTGGCTTTGTTAAAGAAGTTATCAGGTTC +
Preference number: 4 (lower is better)
Translates to: HVHLSPLSLHYS*MSGFVKEVIRF
Trigger: GAACCTGATAACTTCTTTAACAAAGCCAGACATCAAAGAGTAGTGTAAGGAGAGAGGAGACAGATGCACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CAA 72 bp GGTAGAGAACTTTCCAATTTTATCATTGGAAAGCACTaGGGAGAGAGGATGGTGAACACATTTGAGGAACTG +
Preference number: 4 (lower is better)
Translates to: GRELSNFIIGKH*GERMVNTFEEL
Trigger: CAGTTCCTCAAATGTGTTCACCATCCTCTCTCCCAAGTGCTTTCCAATGATAAAATTGGAAAGTTCTCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR TCA 90 bp AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGGGTAATGATTGTCTCTaGAATCATCCAGCATTTCAA +
Preference number: 4 (lower is better)
Translates to: KNLNALAQTFTTVEVEAEGNDCL*NHPAFQ
Trigger: TTGAAATGCTGGATGATTTCAGAGACAATCATTACC...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CCA 90 bp AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGTATTTTCAATGTGCTTaGCCAAGTAATGAGACGACA +
Preference number: 4 (lower is better)
Translates to: KNLNALAQTFTTVEVEAEYFQCA*PSNETT
Trigger: TGTCGTCTCATTACTTGGCCAAGCACATTGAAAATA...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CAA 72 bp AGTTATTCTGCTATCTTGCTCTTTTCTCGGGGAGATTaGCTCAGGAAATCTGACTTCTTCAGCTCATTAGTT +
Preference number: 4 (lower is better)
Translates to: SYSAILLFSRGD*LRKSDFFSSLV
Trigger: AACTAATGAGCTGAAGAAGTCAGATTTCCTGAGCAAATCTCCCCGAGAAAAGAGCAAGATAGCAGAATAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
3UTR CAA 72 bp TCAGTTATAATGGCCTTCTGCCCTCCAGTGTGGGCTTaGATACAAAGAATATTATTACTAATTTGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SVIMAFCPPVWA*IQRILLLICLS
Trigger: ACTGAGGCAAATTAGTAATAATATTCTTTGTATCAAAGCCCACACTGGAGGGCAGAAGGCCATTATAACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS GCA 90 bp TGCTTTTCTCCTCACCAGCTATCCCAGCCTCCACGGTGCTTTTCCTaGTTCCAGTGGTCGAGGCTGAATCATCAGGCGCCTGGTTGGCGT +
Preference number: 5 (lower is better)
Translates to: CFSPHQLSQPPRCFS*FQWSRLNHQAPGWR
Trigger: ACGCCAACCAGGCGCCTGATGATTCAGCCTCGACCACTGGAAGCAGGAAAAGCACCGTGGAGGCTGGGATAGCTGGTGAGGAGAAAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS TCA 90 bp TCGGGGAAGTTGGCCAACTGCAAAGACTCTTCCTCAGGTTCTCTGTaGTGCGGCGTATTCACCGTTGAACTGGGCTCCGCACACCACCTG +
Preference number: 5 (lower is better)
Translates to: SGKLANCKDSSSGSL*CGVFTVELGSAHHL
Trigger: CAGGTGGTGTGCGGAGCCCAGTTCAACGGTGAATACGCCGCATCACAGAGAACCTGAGGAAGAGTCTTTGCAGTTGGCCAACTTCCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CAA 90 bp GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCATCCATGATGGCACCCTaGAACATATCTTGGTCTAGG +
Preference number: 5 (lower is better)
Translates to: VVELSWTLPGRKVRGSHASMMAP*NISWSR
Trigger: CCTAGACCAAGATATGTTCAAGGGTGCCATCATGGA...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CAA 90 bp GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCAGCACTTATCTTCATGTaGCTGAGGTTCAGTTGTGCA +
Preference number: 5 (lower is better)
Translates to: VVELSWTLPGRKVRGSHAALIFM*LRFSCA
Trigger: TGCACAACTGAACCTCAGCAACATGAAGATAAGTGC...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CAA 90 bp GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCATTCGGTGGTAAGCTCTaGTCGTGTTTTGGTATGAGT +
Preference number: 5 (lower is better)
Translates to: VVELSWTLPGRKVRGSHAFGGKL*SCFGMS
Trigger: ACTCATACCAAAACACGACAAGAGCTTACCACCGAA...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CAA 90 bp CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATTCCCTAGCCCATTCATaGTCAGATCCTGGGGTTCTC +
Preference number: 5 (lower is better)
Translates to: PKDRILQTGSPYLPLLCNSLAHS*SDPGVL
Trigger: GAGAACCCCAGGATCTGACAATGAATGGGCTAGGGA...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS TCA 90 bp CAAAGACTCTTCCTCAGGTTCTCTGTGATGCGGCGTATTCACCGTTaGACTGGGCTCCGCACACCACCTGTTGGCTTCATTGCCATTTCT +
Preference number: 5 (lower is better)
Translates to: QRLFLRFSVMRRIHR*TGLRTPPVGFIAIS
Trigger: AGAAATGGCAATGAAGCCAACAGGTGGTGTGCGGAGCCCAGTTCAACGGTGAATACGCCGCATCACAGAGAACCTGAGGAAGAGTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS GCA 90 bp CGACAGGTCCTCCTCAGTTATTGTGAGTCCACACAGCTCACAAGATaGATTCTCTGCATCCTCTTGTATGGGGCTGGTGTTATTCGGGGG +
Preference number: 5 (lower is better)
Translates to: RQVLLSYCESTQLTR*ILCILLYGAGVIRG
Trigger: CCCCCGAATAACACCAGCCCCATACAAGAGGATGCAGAGAATGCATCTTGTGAGCTGTGTGGACTCACAATAACTGAGGAGGACCTGTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CCA 90 bp GTGCTTTTCCTGCTTCCAGTGGTCGAGGCTGAATCATCAGGCGCCTaGTTGGCGTCTTCTCTGTATTTGTCCGGCTGTGCAGAAAATGTT +
Preference number: 5 (lower is better)
Translates to: VLFLLPVVEAESSGA*LASSLYLSGCAENV
Trigger: AACATTTTCTGCACAGCCGGACAAATACAGAGAAGACGCCAACCAGGCGCCTGATGATTCAGCCTCGACCACTGGAAGCAGGAAAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CAA 90 bp CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATGACGGCTTTGTGTGCTaGGAAGTAGATGTCGTCGAT +
Preference number: 5 (lower is better)
Translates to: PKDRILQTGSPYLPLLCNDGFVC*EVDVVD
Trigger: ATCGACGACATCTACTTCCAAGCACACAAAGCCGTC...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CAA 90 bp GCAGAGGTCAATCAGCATGATCTTGGATTGGGAGTCACGAGCCAAGGGAAAAAGAAAGCCCCACTCTCTTaGGTTGTTGAGCTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: AEVNQHDLGLGVTSQGKKKAPLS*VVELLQ
Trigger: CTGCAGCAGCTCAACAACCAAAGAGAGTGGGGCTTT...CTTTTTCCCTTGGCTCGTGACTCCCAATCCAAGATCATGCTGATTGACCTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CAA 90 bp AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCTCCGCACACCACCTGTaGGCTTCATTGCCATTTCTA +
Preference number: 5 (lower is better)
Translates to: NSDLSLLQRLRRPYCTTASAHHL*ASLPFL
Trigger: TAGAAATGGCAATGAAGCCAACAGGTGGTGTGCGGA...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CCA 90 bp CACACAGCTCACAAGATGCATTCTCTGCATCCTCTTGTATGGGGCTaGTGTTATTCGGGGGTCTCATGTTCTCTAAGCCACCTCTCTCAT +
Preference number: 5 (lower is better)
Translates to: HTAHKMHSLHPLVWG*CYSGVSCSLSHLSH
Trigger: ATGAGAGAGGTGGCTTAGAGAACATGAGACCCCCGAATAACACCAGCCCCATACAAGAGGATGCAGAGAATGCATCTTGTGAGCTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CAA 90 bp CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATTACCTGGCCATGCCTTaGTGCATATCATTGTGTAGA +
Preference number: 5 (lower is better)
Translates to: PKDRILQTGSPYLPLLCNYLAMP*CISLCR
Trigger: TCTACACAATGATATGCACAAAGGCATGGCCAGGTA...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS GCA 90 bp CTCCTCAGTTATTGTGAGTCCACACAGCTCACAAGATGCATTCTCTaGATCCTCTTGTATGGGGCTGGTGTTATTCGGGGGTCTCATGTT +
Preference number: 5 (lower is better)
Translates to: LLSYCESTQLTRCIL*ILLYGAGVIRGSHV
Trigger: AACATGAGACCCCCGAATAACACCAGCCCCATACAAGAGGATGCAGAGAATGCATCTTGTGAGCTGTGTGGACTCACAATAACTGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CAA 90 bp CCACATGGTGGCTCACAACCATTCATAATGGAATCTGACTCCCTCTTCTGGAGTCCTTTGTGCATATCATaGTGTAGACGCAACTGGCGC +
Preference number: 5 (lower is better)
Translates to: PHGGSQPFIMESDSLFWSPLCIS*CRRNWR
Trigger: GCGCCAGTTGCGTCTACACAATGATATGCACAAAGG...ACTCCAGAAGAGGGAGTCAGATTCCATTATGAATGGTTGTGAGCCACCATGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS GCA 90 bp GTCTTCCAAGCAGTCAGGAACATTGTACAGCTGGAGGTAGTTCATTaGCACTTTGAACTGCTCGAAACTGGAAGGAGCGGTCATGATCTT +
Preference number: 5 (lower is better)
Translates to: VFQAVRNIVQLEVVH*HFELLETGRSGHDL
Trigger: AAGATCATGACCGCTCCTTCCAGTTTCGAGCAGTTCAAAGTGGCAATGAACTACCTCCAGCTGTACAATGTTCCTGACTGCTTGGAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CAA 90 bp AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTAGCGGCTCGGGGAAGTaGGCCAACTGCAAAGACTCT +
Preference number: 5 (lower is better)
Translates to: NLNLNFQLSTHCWAPKGSSGSGK*ANCKDS
Trigger: AGAGTCTTTGCAGTTGGCCAACTTCCCCGAGCCGCT...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS GCA 90 bp ACCGTGTCTTCATACATTCTCACCCCAAAAATCATCTTGCTGCTCTaGCTGCTGGAGGCAGAAGACGAACACTTTGAACTAGAACAGTCT +
Preference number: 5 (lower is better)
Translates to: TVSSYILTPKIILLL*LLEAEDEHFELEQS
Trigger: AGACTGTTCTAGTTCAAAGTGTTCGTCTTCTGCCTCCAGCAGGCAGAGCAGCAAGATGATTTTTGGGGTGAGAATGTATGAAGACACGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CAA 90 bp AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCTCTTCTGGCTCCATCTaGATGATAATTCGTTTTGTC +
Preference number: 5 (lower is better)
Translates to: NSDLSLLQRLRRPYCTTASSGSI*MIIRFV
Trigger: GACAAAACGAATTATCATCAAGATGGAGCCAGAAGA...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CAA 90 bp AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCTTTTCGGAAGTTTCCTaGATCACAAATGGAACAGAC +
Preference number: 5 (lower is better)
Translates to: NSDLSLLQRLRRPYCTTAFSEVS*ITNGTD
Trigger: GTCTGTTCCATTTGTGATCAAGGAAACTTCCGAAAA...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CAA 90 bp CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATCATATGCTGCTCCAGTaGTTCATTATTTGGGAATAT +
Preference number: 5 (lower is better)
Translates to: PKDRILQTGSPYLPLLCNHMLLQ*FIIWEY
Trigger: ATATTCCCAAATAATGAACAACTGGAGCAGCATATG...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS GCA 90 bp CTGAAATCATCCAGCATTTCAACAAACATGTCTCTTATCTCAGACTaGTCGTCGGGGTTCTCTTCCATGTCCATTTTCTCGTCAGCGTTC +
Preference number: 5 (lower is better)
Translates to: LKSSSISTNMSLISD*SSGFSSMSIFSSAF
Trigger: GAACGCTGACGAGAAAATGGACATGGAAGAGAACCCCGACGAGCAGTCTGAGATAAGAGACATGTTTGTTGAAATGCTGGATGATTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CCA 90 bp CATGTTTTCGGAAGTTTCCTTGATCACAAATGGAACAGACATACCTaGCCATGCCTTTGTGCATATCATTGTGTAGACGCAACTGGCGCT +
Preference number: 5 (lower is better)
Translates to: HVFGSFLDHKWNRHT*PCLCAYHCVDATGA
Trigger: AGCGCCAGTTGCGTCTACACAATGATATGCACAAAGGCATGGCCAGGTATGTCTGTTCCATTTGTGATCAAGGAAACTTCCGAAAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CAA 90 bp AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGGTTGCTGAGGTTCAGTaGTGCAGTACTGTGCTGATG +
Preference number: 5 (lower is better)
Translates to: KNLNALAQTFTTVEVEAEVAEVQ*CSTVLM
Trigger: CATCAGCACAGTACTGCACAACTGAACCTCAGCAAC...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS TCA 90 bp TGCGAGATCATATGCCGTACATGGTCATGTTTTCGGAAGTTTCCTTaGTCACAAATGGAACAGACATACCTGGCCATGCCTTTGTGCATA +
Preference number: 5 (lower is better)
Translates to: CEIICRTWSCFRKFP*SQMEQTYLAMPLCI
Trigger: TATGCACAAAGGCATGGCCAGGTATGTCTGTTCCATTTGTGATCAAGGAAACTTCCGAAAACATGACCATGTACGGCATATGATCTCGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CAA 90 bp AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGGCGTCTTCTCTGTATTaGTCCGGCTGTGCAGAAAAT +
Preference number: 5 (lower is better)
Translates to: KNLNALAQTFTTVEVEAEASSLY*SGCAEN
Trigger: ATTTTCTGCACAGCCGGACAAATACAGAGAAGACGC...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CAA 90 bp CCACATGGTGGCTCACAACCATTCATAATGGAATCTGACTCCCTCTTCTGGAGTTCAGCAAGTTCAGCTTaGATGTTACTATCTTTTCCA +
Preference number: 5 (lower is better)
Translates to: PHGGSQPFIMESDSLFWSSASSA*MLLSFP
Trigger: TGGAAAAGATAGTAACATCAAAGCTGAACTTGCTGA...ACTCCAGAAGAGGGAGTCAGATTCCATTATGAATGGTTGTGAGCCACCATGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CAA 90 bp AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGTCTTCTAATTCATCATaGTCGGTGGACTCGTTGCAG +
Preference number: 5 (lower is better)
Translates to: KNLNALAQTFTTVEVEAESSNSS*SVDSLQ
Trigger: CTGCAACGAGTCCACCGACAATGATGAATTAGAAGA...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS-3UTR CAA 90 bp AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGATTCTCTGCATCCTCTaGTATGGGGCTGGTGTTATT +
Preference number: 5 (lower is better)
Translates to: KNLNALAQTFTTVEVEAEILCIL*YGAGVI
Trigger: AATAACACCAGCCCCATACAAGAGGATGCAGAGAAT...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CCA 90 bp TATGCCGTACATGGTCATGTTTTCGGAAGTTTCCTTGATCACAAATaGAACAGACATACCTGGCCATGCCTTTGTGCATATCATTGTGTA +
Preference number: 5 (lower is better)
Translates to: YAVHGHVFGSFLDHK*NRHTWPCLCAYHCV
Trigger: TACACAATGATATGCACAAAGGCATGGCCAGGTATGTCTGTTCCATTTGTGATCAAGGAAACTTCCGAAAACATGACCATGTACGGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS GCA 90 bp TCGAAACTGGAAGGAGCGGTCATGATCTTTCCTAAATACATGAACTaGAAAATGAGATCAAAGCACTCAGCACTTATCTTCATGTTGCTG +
Preference number: 5 (lower is better)
Translates to: SKLEGAVMIFPKYMN*KMRSKHSALIFMLL
Trigger: CAGCAACATGAAGATAAGTGCTGAGTGCTTTGATCTCATTTTGCAGTTCATGTATTTAGGAAAGATCATGACCGCTCCTTCCAGTTTCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS GCA 90 bp CTTGGCATTATAATGCGATCTCATATCCTTCCTCAAATTAAACTTTaGTCCACATATTCCACACGTGTACAGATGGACATCCATATGCTG +
Preference number: 5 (lower is better)
Translates to: LGIIMRSHILPQIKL*STYSTRVQMDIHML
Trigger: CAGCATATGGATGTCCATCTGTACACGTGTGGAATATGTGGAGCAAAGTTTAATTTGAGGAAGGATATGAGATCGCATTATAATGCCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CCA 90 bp CAGCTAGACATATGTTCGACCACTAAATTTTCAGTTTCAAAACGCTaGCCACAATTAGGACATCGGAAAGGACAGGCAGAATGTTTAAAT +
Preference number: 5 (lower is better)
Translates to: QLDICSTTKFSVSKR*PQLGHRKGQAECLN
Trigger: ATTTAAACATTCTGCCTGTCCTTTCCGATGTCCTAATTGTGGCCAGCGTTTTGAAACTGAAAATTTAGTGGTCGAACATATGTCTAGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CCA 90 bp TTCCTCAAATTAAACTTTGCTCCACATATTCCACACGTGTACAGATaGACATCCATATGCTGCTCCAGTTGTTCATTATTTGGGAATATC +
Preference number: 5 (lower is better)
Translates to: FLKLNFAPHIPHVYR*TSICCSSCSLFGNI
Trigger: GATATTCCCAAATAATGAACAACTGGAGCAGCATATGGATGTCCATCTGTACACGTGTGGAATATGTGGAGCAAAGTTTAATTTGAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS GCA 90 bp GTCTTTCTCAGTAACTTTAATAATGTTGAAGTCTTTCATGTCATCTaGAGGGATATCTTCTGGCTCCATCTTGATGATAATTCGTTTTGT +
Preference number: 5 (lower is better)
Translates to: VFLSNFNNVEVFHVI*RDIFWLHLDDNSFC
Trigger: ACAAAACGAATTATCATCAAGATGGAGCCAGAAGATATCCCTGCAGATGACATGAAAGACTTCAACATTATTAAAGTTACTGAGAAAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS GCA 72 bp CCTCACCAGCTATCCCAGCCTCCACGGTGCTTTTCCTaGTTCCAGTGGTCGAGGCTGAATCATCAGGCGCCT +
Preference number: 6 (lower is better)
Translates to: PHQLSQPPRCFS*FQWSRLNHQAP
Trigger: AGGCGCCTGATGATTCAGCCTCGACCACTGGAAGCAGGAAAAGCACCGTGGAGGCTGGGATAGCTGGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS TCA 72 bp CTCCACGGTGCTTTTCCTGCTTCCAGTGGTCGAGGCTaGATCATCAGGCGCCTGGTTGGCGTCTTCTCTGTA +
Preference number: 6 (lower is better)
Translates to: LHGAFPASSGRG*IIRRLVGVFSV
Trigger: TACAGAGAAGACGCCAACCAGGCGCCTGATGATTCAGCCTCGACCACTGGAAGCAGGAAAAGCACCGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CCA 72 bp CTGCTTCCAGTGGTCGAGGCTGAATCATCAGGCGCCTaGTTGGCGTCTTCTCTGTATTTGTCCGGCTGTGCA +
Preference number: 6 (lower is better)
Translates to: LLPVVEAESSGA*LASSLYLSGCA
Trigger: TGCACAGCCGGACAAATACAGAGAAGACGCCAACCAGGCGCCTGATGATTCAGCCTCGACCACTGGAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CCA 72 bp CAGGTTCTCTGTGATGCGGCGTATTCACCGTTGAACTaGGCTCCGCACACCACCTGTTGGCTTCATTGCCAT +
Preference number: 6 (lower is better)
Translates to: QVLCDAAYSPLN*APHTTCWLHCH
Trigger: ATGGCAATGAAGCCAACAGGTGGTGTGCGGAGCCCAGTTCAACGGTGAATACGCCGCATCACAGAGAACCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CAA 72 bp CTTCCTCAGGTTCTCTGTGATGCGGCGTATTCACCGTaGAACTGGGCTCCGCACACCACCTGTTGGCTTCAT +
Preference number: 6 (lower is better)
Translates to: LPQVLCDAAYSP*NWAPHTTCWLH
Trigger: ATGAAGCCAACAGGTGGTGTGCGGAGCCCAGTTCAACGGTGAATACGCCGCATCACAGAGAACCTGAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CAA 72 bp CTTCCAGTGGTCGAGGCTGAATCATCAGGCGCCTGGTaGGCGTCTTCTCTGTATTTGTCCGGCTGTGCAGAA +
Preference number: 6 (lower is better)
Translates to: LPVVEAESSGAW*ASSLYLSGCAE
Trigger: TTCTGCACAGCCGGACAAATACAGAGAAGACGCCAACCAGGCGCCTGATGATTCAGCCTCGACCACTGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS TCA 72 bp TTCCTCAGGTTCTCTGTGATGCGGCGTATTCACCGTTaGACTGGGCTCCGCACACCACCTGTTGGCTTCATT +
Preference number: 6 (lower is better)
Translates to: FLRFSVMRRIHR*TGLRTPPVGFI
Trigger: AATGAAGCCAACAGGTGGTGTGCGGAGCCCAGTTCAACGGTGAATACGCCGCATCACAGAGAACCTGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS GCA 72 bp TGCTTTTCTCCTCACCAGCTATCCCAGCCTCCACGGTaGTTTTCCTGCTTCCAGTGGTCGAGGCTGAATCAT +
Preference number: 6 (lower is better)
Translates to: CFSPHQLSQPPR*FSCFQWSRLNH
Trigger: ATGATTCAGCCTCGACCACTGGAAGCAGGAAAAGCACCGTGGAGGCTGGGATAGCTGGTGAGGAGAAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CCA 72 bp TTCCAGTGGTCGAGGCTGAATCATCAGGCGCCTGGTTaGCGTCTTCTCTGTATTTGTCCGGCTGTGCAGAAA +
Preference number: 6 (lower is better)
Translates to: FQWSRLNHQAPG*RLLCICPAVQK
Trigger: TTTCTGCACAGCCGGACAAATACAGAGAAGACGCCAACCAGGCGCCTGATGATTCAGCCTCGACCACTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CAA 90 bp GCAAAGACTCTTCCTCAGGTTCTCTGTGATGCGGCGTATTCACCGTaGAACTGGGCTCCGCACACCACCTGTTGGCTTCATTGCCATTTC +
Preference number: 6 (lower is better)
Translates to: AKTLPQVLCDAAYSP*NWAPHTTCWLHCHF
Trigger: GAAATGGCAATGAAGCCAACAGGTGGTGTGCGGAGCCCAGTTCAACGGTGAATACGCCGCATCACAGAGAACCTGAGGAAGAGTCTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CAA 72 bp GTATTCACCGTTGAACTGGGCTCCGCACACCACCTGTaGGCTTCATTGCCATTTCTAGCCACCGTGTCTTCA +
Preference number: 6 (lower is better)
Translates to: VFTVELGSAHHL*ASLPFLATVSS
Trigger: TGAAGACACGGTGGCTAGAAATGGCAATGAAGCCAACAGGTGGTGTGCGGAGCCCAGTTCAACGGTGAATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CAA 72 bp TGTCCATTTTCTCGTCAGCGTTCCCTAGCCCATTCATaGTCAGATCCTGGGGTTCTCCGCACCTCTGAGCAT +
Preference number: 6 (lower is better)
Translates to: CPFSRQRSLAHS*SDPGVLRTSEH
Trigger: ATGCTCAGAGGTGCGGAGAACCCCAGGATCTGACAATGAATGGGCTAGGGAACGCTGACGAGAAAATGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CAA 90 bp TCTCTTCCATGTCCATTTTCTCGTCAGCGTTCCCTAGCCCATTCATaGTCAGATCCTGGGGTTCTCCGCACCTCTGAGCATGTTCCTGAA +
Preference number: 6 (lower is better)
Translates to: SLPCPFSRQRSLAHS*SDPGVLRTSEHVPE
Trigger: TTCAGGAACATGCTCAGAGGTGCGGAGAACCCCAGGATCTGACAATGAATGGGCTAGGGAACGCTGACGAGAAAATGGACATGGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS TCA 72 bp CGCACCTCTGAGCATGTTCCTGAAGCTGTCTGCCCTTaGCAAGTATCTGTCCACATTTACCACATGCACAGA +
Preference number: 6 (lower is better)
Translates to: RTSEHVPEAVCP*QVSVHIYHMHR
Trigger: TCTGTGCATGTGGTAAATGTGGACAGATACTTGTCAAGGGCAGACAGCTTCAGGAACATGCTCAGAGGTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS GCA 72 bp GCAGTCAGGAACATTGTACAGCTGGAGGTAGTTCATTaGCACTTTGAACTGCTCGAAACTGGAAGGAGCGGT +
Preference number: 6 (lower is better)
Translates to: AVRNIVQLEVVH*HFELLETGRSG
Trigger: ACCGCTCCTTCCAGTTTCGAGCAGTTCAAAGTGGCAATGAACTACCTCCAGCTGTACAATGTTCCTGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS GCA 72 bp CCGTGTCTTCATACATTCTCACCCCAAAAATCATCTTaGTGCTCTGCCTGCTGGAGGCAGAAGACGAACACT +
Preference number: 6 (lower is better)
Translates to: PCLHTFSPQKSS*CSACWRQKTNT
Trigger: AGTGTTCGTCTTCTGCCTCCAGCAGGCAGAGCAGCAAGATGATTTTTGGGGTGAGAATGTATGAAGACACGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CCA 72 bp CACAAGATGCATTCTCTGCATCCTCTTGTATGGGGCTaGTGTTATTCGGGGGTCTCATGTTCTCTAAGCCAC +
Preference number: 6 (lower is better)
Translates to: HKMHSLHPLVWG*CYSGVSCSLSH
Trigger: GTGGCTTAGAGAACATGAGACCCCCGAATAACACCAGCCCCATACAAGAGGATGCAGAGAATGCATCTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CAA 72 bp TCCACACAGCTCACAAGATGCATTCTCTGCATCCTCTaGTATGGGGCTGGTGTTATTCGGGGGTCTCATGTT +
Preference number: 6 (lower is better)
Translates to: STQLTRCILCIL*YGAGVIRGSHV
Trigger: AACATGAGACCCCCGAATAACACCAGCCCCATACAAGAGGATGCAGAGAATGCATCTTGTGAGCTGTGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CCA 72 bp ACAGCTCACAAGATGCATTCTCTGCATCCTCTTGTATaGGGCTGGTGTTATTCGGGGGTCTCATGTTCTCTA +
Preference number: 6 (lower is better)
Translates to: TAHKMHSLHPLV*GWCYSGVSCSL
Trigger: TAGAGAACATGAGACCCCCGAATAACACCAGCCCCATACAAGAGGATGCAGAGAATGCATCTTGTGAGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CAA 90 bp TTTCTAGCCACCGTGTCTTCATACATTCTCACCCCAAAAATCATCTaGCTGCTCTGCCTGCTGGAGGCAGAAGACGAACACTTTGAACTA +
Preference number: 6 (lower is better)
Translates to: FLATVSSYILTPKII*LLCLLEAEDEHFEL
Trigger: TAGTTCAAAGTGTTCGTCTTCTGCCTCCAGCAGGCAGAGCAGCAAGATGATTTTTGGGGTGAGAATGTATGAAGACACGGTGGCTAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS GCA 72 bp TGTCTTCATACATTCTCACCCCAAAAATCATCTTGCTaGTCTGCCTGCTGGAGGCAGAAGACGAACACTTTG +
Preference number: 6 (lower is better)
Translates to: CLHTFSPQKSSC*SACWRQKTNTL
Trigger: CAAAGTGTTCGTCTTCTGCCTCCAGCAGGCAGAGCAGCAAGATGATTTTTGGGGTGAGAATGTATGAAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CAA 72 bp GAATCATCAGGCGCCTGGTTGGCGTCTTCTCTGTATTaGTCCGGCTGTGCAGAAAATGTTTTAGAAGAATCC +
Preference number: 6 (lower is better)
Translates to: ESSGAWLASSLY*SGCAENVLEES
Trigger: GGATTCTTCTAAAACATTTTCTGCACAGCCGGACAAATACAGAGAAGACGCCAACCAGGCGCCTGATGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CAA 72 bp GAACAGACATACCTGGCCATGCCTTTGTGCATATCATaGTGTAGACGCAACTGGCGCTCTCTTAAAAACTGC +
Preference number: 6 (lower is better)
Translates to: EQTYLAMPLCIS*CRRNWRSLKNC
Trigger: GCAGTTTTTAAGAGAGCGCCAGTTGCGTCTACACAATGATATGCACAAAGGCATGGCCAGGTATGTCTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CAA 90 bp GTGCGAGATCATATGCCGTACATGGTCATGTTTTCGGAAGTTTCCTaGATCACAAATGGAACAGACATACCTGGCCATGCCTTTGTGCAT +
Preference number: 6 (lower is better)
Translates to: VRDHMPYMVMFSEVS*ITNGTDIPGHAFVH
Trigger: ATGCACAAAGGCATGGCCAGGTATGTCTGTTCCATTTGTGATCAAGGAAACTTCCGAAAACATGACCATGTACGGCATATGATCTCGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS TCA 72 bp TACTATTCGGTGGTAAGCTCTTGTCGTGTTTTGGTATaGGTGTCTGTTGGTACAGGTCAGCACATGTTCGTC +
Preference number: 6 (lower is better)
Translates to: YYSVVSSCRVLV*VSVGTGQHMFV
Trigger: GACGAACATGTGCTGACCTGTACCAACAGACACTCATACCAAAACACGACAAGAGCTTACCACCGAATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS GCA 72 bp TCCAGCATTTCAACAAACATGTCTCTTATCTCAGACTaGTCGTCGGGGTTCTCTTCCATGTCCATTTTCTCG +
Preference number: 6 (lower is better)
Translates to: SSISTNMSLISD*SSGFSSMSIFS
Trigger: CGAGAAAATGGACATGGAAGAGAACCCCGACGAGCAGTCTGAGATAAGAGACATGTTTGTTGAAATGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CAA 90 bp TCACAAATGGAACAGACATACCTGGCCATGCCTTTGTGCATATCATaGTGTAGACGCAACTGGCGCTCTCTTAAAAACTGCTTTCCACAT +
Preference number: 6 (lower is better)
Translates to: SQMEQTYLAMPLCIS*CRRNWRSLKNCFPH
Trigger: ATGTGGAAAGCAGTTTTTAAGAGAGCGCCAGTTGCGTCTACACAATGATATGCACAAAGGCATGGCCAGGTATGTCTGTTCCATTTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CCA 72 bp GGAAGTTTCCTTGATCACAAATGGAACAGACATACCTaGCCATGCCTTTGTGCATATCATTGTGTAGACGCA +
Preference number: 6 (lower is better)
Translates to: GSFLDHKWNRHT*PCLCAYHCVDA
Trigger: TGCGTCTACACAATGATATGCACAAAGGCATGGCCAGGTATGTCTGTTCCATTTGTGATCAAGGAAACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CCA 72 bp GGTAAGCTCTTGTCGTGTTTTGGTATGAGTGTCTGTTaGTACAGGTCAGCACATGTTCGTCTAGTAACTTTT +
Preference number: 6 (lower is better)
Translates to: GKLLSCFGMSVC*YRSAHVRLVTF
Trigger: AAAAGTTACTAGACGAACATGTGCTGACCTGTACCAACAGACACTCATACCAAAACACGACAAGAGCTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CCA 72 bp CACATTTACCACATGCACAGATATTTTCAATGTGCTTaGCCAAGTAATGAGACGACAGGTCCTCCTCAGTTA +
Preference number: 6 (lower is better)
Translates to: HIYHMHRYFQCA*PSNETTGPPQL
Trigger: TAACTGAGGAGGACCTGTCGTCTCATTACTTGGCCAAGCACATTGAAAATATCTGTGCATGTGGTAAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CCA 72 bp ATATGTTCGACCACTAAATTTTCAGTTTCAAAACGCTaGCCACAATTAGGACATCGGAAAGGACAGGCAGAA +
Preference number: 6 (lower is better)
Translates to: ICSTTKFSVSKR*PQLGHRKGQAE
Trigger: TTCTGCCTGTCCTTTCCGATGTCCTAATTGTGGCCAGCGTTTTGAAACTGAAAATTTAGTGGTCGAACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CAA 90 bp GAGATCAAAGCACTCAGCACTTATCTTCATGTTGCTGAGGTTCAGTaGTGCAGTACTGTGCTGATGGTTCATGAAAAACATCCTAAAGTA +
Preference number: 6 (lower is better)
Translates to: EIKALSTYLHVAEVQ*CSTVLMVHEKHPKV
Trigger: TACTTTAGGATGTTTTTCATGAACCATCAGCACAGTACTGCACAACTGAACCTCAGCAACATGAAGATAAGTGCTGAGTGCTTTGATCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CAA 90 bp TTGAAGTCTTTCATGTCATCTGCAGGGATATCTTCTGGCTCCATCTaGATGATAATTCGTTTTGTCTCAGTAGCTCTGCTTTTCTCCTCA +
Preference number: 6 (lower is better)
Translates to: LKSFMSSAGISSGSI*MIIRFVSVALLFSS
Trigger: TGAGGAGAAAAGCAGAGCTACTGAGACAAAACGAATTATCATCAAGATGGAGCCAGAAGATATCCCTGCAGATGACATGAAAGACTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CAA 90 bp GGCTCCTCGGGTTCATCTTCTAATTCATCATTGTCGGTGGACTCGTaGCAGTCTTTCTCAGTAACTTTAATAATGTTGAAGTCTTTCATG +
Preference number: 6 (lower is better)
Translates to: GSSGSSSNSSLSVDS*QSFSVTLIMLKSFM
Trigger: CATGAAAGACTTCAACATTATTAAAGTTACTGAGAAAGACTGCAACGAGTCCACCGACAATGATGAATTAGAAGATGAACCCGAGGAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CCA 72 bp GTTGAAGTCTTTCATGTCATCTGCAGGGATATCTTCTaGCTCCATCTTGATGATAATTCGTTTTGTCTCAGT +
Preference number: 6 (lower is better)
Translates to: VEVFHVICRDIF*LHLDDNSFCLS
Trigger: ACTGAGACAAAACGAATTATCATCAAGATGGAGCCAGAAGATATCCCTGCAGATGACATGAAAGACTTCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS GCA 72 bp ATAATGCGATCTCATATCCTTCCTCAAATTAAACTTTaGTCCACATATTCCACACGTGTACAGATGGACATC +
Preference number: 6 (lower is better)
Translates to: IMRSHILPQIKL*STYSTRVQMDI
Trigger: GATGTCCATCTGTACACGTGTGGAATATGTGGAGCAAAGTTTAATTTGAGGAAGGATATGAGATCGCATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4
CDS CCA 72 bp TTAAACTTTGCTCCACATATTCCACACGTGTACAGATaGACATCCATATGCTGCTCCAGTTGTTCATTATTT +
Preference number: 6 (lower is better)
Translates to: LNFAPHIPHVYR*TSICCSSCSLF
Trigger: AAATAATGAACAACTGGAGCAGCATATGGATGTCCATCTGTACACGTGTGGAATATGTGGAGCAAAGTTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042779.4