Pregenerated sensors for ZBTB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033454Ensembl transcript IDs: ENSMUST00000042779.4
Found 248 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CACACGAGGTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTaGGAGGGAGCCATGCAAGGGAGAGGAAGCAGTGGCCGTTTTTCA | + |
Preference number: 1 (lower is better) Translates to: HTRWWNFPGPSQEGR*EGAMQGRGSSGRFS Trigger: TGAAAAACGGCCACTGCTTCCTCTCCCTTGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCACCTCGTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CCA 90 bp | TCCCAGGTGCTAGGACCACAGACAGATGTCACCGTGCCTGGCCTCTaGCTTTGCTCTTTGGGGGAGTTTCTCTTCCTTCCTCTCTTTTCT | + |
Preference number: 1 (lower is better) Translates to: SQVLGPQTDVTVPGL*LCSLGEFLFLPLFS Trigger: AGAAAAGAGAGGAAGGAAGAGAAACTCCCCCAAAGAGCAAAGCCAGAGGCCAGGCACGGTGACATCTGTCTGTGGTCCTAGCACCTGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR GCA 90 bp | GGCAAATTCCATTCCAGCCTTGACAAGGCAAGAGGAGAGGCAATATaGACACGAGGTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAA | + |
Preference number: 1 (lower is better) Translates to: GKFHSSLDKARGEAI*TRGGGTFLDPPRKE Trigger: TTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCACCTCGTGTGCATATTGCCTCTCCTCTTGCCTTGTCAAGGCTGGAATGGAATTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR GCA 90 bp | CAATTTTACCTGAGCCCTGTCTTGCATGCTGCTTGGAGAGACCTGTaGTACCCTGTGGCTTACTTCCCCAAACCATGTGGACTACGTAGG | + |
Preference number: 1 (lower is better) Translates to: QFYLSPVLHAAWRDL*YPVAYFPKPCGLRR Trigger: CCTACGTAGTCCACATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCAGCATGCAAGACAGGGCTCAGGTAAAATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR GCA 90 bp | AAAATGTGGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACCGACTaGTCTTCCAAAGGTCTGGAGTACAAATCCCAGCAACCACATGGT | + |
Preference number: 1 (lower is better) Translates to: KMWGWRDGSVVKSTD*SSKGLEYKSQQPHG Trigger: ACCATGTGGTTGCTGGGATTTGTACTCCAGACCTTTGGAAGAGCAGTCGGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCCACATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CCA 90 bp | GAGATGGCTCAGTGGTTAAGAGCACCGACTGCTCTTCCAAAGGTCTaGAGTACAAATCCCAGCAACCACATGGTGGCTCACAACCATTCA | + |
Preference number: 1 (lower is better) Translates to: EMAQWLRAPTALPKV*STNPSNHMVAHNHS Trigger: TGAATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGTACTCCAGACCTTTGGAAGAGCAGTCGGTGCTCTTAACCACTGAGCCATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR TCA 90 bp | TTGGGAAGCAGACAGGAGGGTCATAAGTTCAAGGCCAGGCTGGGCTaGGGCCCTGTCTTCAAAACAAAACAAATCCCTAGCTCTATCTAC | + |
Preference number: 1 (lower is better) Translates to: LGSRQEGHKFKARLG*GPVFKTKQIPSSIY Trigger: GTAGATAGAGCTAGGGATTTGTTTTGTTTTGAAGACAGGGCCTCAGCCCAGCCTGGCCTTGAACTTATGACCCTCCTGTCTGCTTCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR TCA 90 bp | TGTTTTTCTGAGACAGTTTCTCTCTGTGTAGCCCTGGCTGCTTCCTaGGTGCTGGAATTACAGGGGTGCACCACCACACCTAGCATTATA | + |
Preference number: 1 (lower is better) Translates to: CFSETVSLCVALAAS*VLELQGCTTTPSII Trigger: TATAATGCTAGGTGTGGTGGTGCACCCCTGTAATTCCAGCACTCAGGAAGCAGCCAGGGCTACACAGAGAGAAACTGTCTCAGAAAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CCA 90 bp | GCTATACTTCTCTGGTTTCTCTTTTCCTCTCCAGATCTGACAATCTaGATCCTCAATGTGTATGAAGCATCAAAGTCAGAAGCAGCAGGC | + |
Preference number: 1 (lower is better) Translates to: AILLWFLFSSPDLTI*ILNVYEASKSEAAG Trigger: GCCTGCTGCTTCTGACTTTGATGCTTCATACACATTGAGGATCCAGATTGTCAGATCTGGAGAGGAAAAGAGAAACCAGAGAAGTATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CCA 90 bp | CCTGAGTATACAGTACTGAAGCAATGGATGCTGGCTTTCCTAATCTaGGGTGTAAATGGCAAATGCTTAACAAGGATGGTGTCACTTAAA | + |
Preference number: 1 (lower is better) Translates to: PEYTVLKQWMLAFLI*GVNGKCLTRMVSLK Trigger: TTTAAGTGACACCATCCTTGTTAAGCATTTGCCATTTACACCCCAGATTAGGAAAGCCAGCATCCATTGCTTCAGTACTGTATACTCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CCA 90 bp | ATCTCTCACTTCTTTTGCAATAAGACTGCCTTTGAGGAGTTTGCCTaGAAATCTACAGATACGTTCATAGATGGGACTATCCACTGTAAC | + |
Preference number: 1 (lower is better) Translates to: ISHFFCNKTAFEEFA*KSTDTFIDGTIHCN Trigger: GTTACAGTGGATAGTCCCATCTATGAACGTATCTGTAGATTTCCAGGCAAACTCCTCAAAGGCAGTCTTATTGCAAAAGAAGTGAGAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR GCA 90 bp | AAAAATAGTATCACAAGTCAACTGCTCTACAAGACAACAACAACATaGTTAGGCTGTAATATAGCTTTGGCACAGAGTAGGGACCAGAGA | + |
Preference number: 1 (lower is better) Translates to: KNSITSQLLYKTTTT*LGCNIALAQSRDQR Trigger: TCTCTGGTCCCTACTCTGTGCCAAAGCTATATTACAGCCTAAGCATGTTGTTGTTGTCTTGTAGAGCAGTTGACTTGTGATACTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR TCA 90 bp | AGTTCAGAAGAAAATAATGTATGGTTTGTGGAAATCTACCACCGCTaGATAATAACGCTGCTCTCTTCAAGAGACTTAGAAAGAAGCTGC | + |
Preference number: 1 (lower is better) Translates to: SSEENNVWFVEIYHR*IITLLSSRDLERSC Trigger: GCAGCTTCTTTCTAAGTCTCTTGAAGAGAGCAGCGTTATTATTCAGCGGTGGTAGATTTCCACAAACCATACATTATTTTCTTCTGAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR TCA 90 bp | GATTGTTCATTGTTTATTAAGAAATTGCAGAAATGGGCCTTCAAATaGAGAGTGTCACGAATAGAGGGAAAAGATGCTATACTTCTCTGG | + |
Preference number: 1 (lower is better) Translates to: DCSLFIKKLQKWAFK*RVSRIEGKDAILLW Trigger: CCAGAGAAGTATAGCATCTTTTCCCTCTATTCGTGACACTCTTCATTTGAAGGCCCATTTCTGCAATTTCTTAATAAACAATGAACAATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CCA 90 bp | TTACATTTCCATAAGAGCTACATTATCTTGTTAAGGAACTGGCCTTaGATTTTCTTTCTCGGTACCCATCTCTTTTTACTTACACTCTAC | + |
Preference number: 1 (lower is better) Translates to: LHFHKSYIILLRNWP*IFFLGTHLFLLTLY Trigger: GTAGAGTGTAAGTAAAAAGAGATGGGTACCGAGAAAGAAAATCCAAGGCCAGTTCCTTAACAAGATAATGTAGCTCTTATGGAAATGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CCA 90 bp | CTAGTGTTACATTTCCATAAGAGCTACATTATCTTGTTAAGGAACTaGCCTTGGATTTTCTTTCTCGGTACCCATCTCTTTTTACTTACA | + |
Preference number: 1 (lower is better) Translates to: LVLHFHKSYIILLRN*PWIFFLGTHLFLLT Trigger: TGTAAGTAAAAAGAGATGGGTACCGAGAAAGAAAATCCAAGGCCAGTTCCTTAACAAGATAATGTAGCTCTTATGGAAATGTAACACTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CAA 90 bp | GGTGGCCTTGAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGTaGGGATTAAAGGCGTGCGCCACCATGGCGCTCCTGGTCTTTTTC | + |
Preference number: 2 (lower is better) Translates to: GGLELRNLPASASRV*GLKACATMALLVFF Trigger: GAAAAAGACCAGGAGCGCCATGGTGGCGCACGCCTTTAATCCCAACACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCAAGGCCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CCA 90 bp | GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCAACCTGTGCTACCCTGTaGCTTACTTCCCCAAACCAT | + |
Preference number: 2 (lower is better) Translates to: VVELSWTLPGRKVRGSHATCATL*LTSPNH Trigger: ATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGT...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR GCA 90 bp | AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCGCCCACAGATCTCTGTaGTCACCCTGGACTGTCTAC | + |
Preference number: 2 (lower is better) Translates to: NSDLSLLQRLRRPYCTTAAHRSL*SPWTVY Trigger: GTAGACAGTCCAGGGTGAGCACAGAGATCTGTGGGC...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR GCA 90 bp | AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCCTTCACCGGAAACAGTaGTGTGGCTGTGCACACACG | + |
Preference number: 2 (lower is better) Translates to: NSDLSLLQRLRRPYCTTALHRKQ*CGCAHT Trigger: CGTGTGTGCACAGCCACAGCACTGTTTCCGGTGAAG...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR GCA 90 bp | AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCGGGTGGGGGCTTGCTTaGTTGTTTTCTTTCCCTTCC | + |
Preference number: 2 (lower is better) Translates to: NSDLSLLQRLRRPYCTTAGWGLA*LFSFPS Trigger: GGAAGGGAAAGAAAACAAGCAAGCAAGCCCCCACCC...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CCA 90 bp | GCAGAGGTCAATCAGCATGATCTTGGATTGGGAGTCACGAGCCAAGGGAAAAAGTCTCTGTGCTCACCCTaGACTGTCTACTCACCCTGC | + |
Preference number: 2 (lower is better) Translates to: AEVNQHDLGLGVTSQGKKSLCSP*TVYSPC Trigger: GCAGGGTGAGTAGACAGTCCAGGGTGAGCACAGAGA...CTTTTTCCCTTGGCTCGTGACTCCCAATCCAAGATCATGCTGATTGACCTCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CCA 90 bp | AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCGGAGAGATGGCTCAGTaGTTAAGAGCACCGACTGCT | + |
Preference number: 2 (lower is better) Translates to: NSDLSLLQRLRRPYCTTAGEMAQ*LRAPTA Trigger: AGCAGTCGGTGCTCTTAACCACTGAGCCATCTCTCC...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CCA 90 bp | AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCATTAGCTGGGCATGGTaGTGCACTGTTGCAGTCCCA | + |
Preference number: 2 (lower is better) Translates to: NSDLSLLQRLRRPYCTTAISWAW*CTVAVP Trigger: TGGGACTGCAACAGTGCACCACCATGCCCAGCTAAT...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR GCA 90 bp | AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCGTTATAATGGCCTTCTaGCCTCCAGTGTGGGCTTTG | + |
Preference number: 2 (lower is better) Translates to: NSDLSLLQRLRRPYCTTAVIMAF*PPVWAL Trigger: CAAAGCCCACACTGGAGGGCAGAAGGCCATTATAAC...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR TCA 90 bp | TGCTTGGAGAGACCTGTGCTACCCTGTGGCTTACTTCCCCAAACCATGTGGACTATCTCAGGCCAAGATTaGGCCCATGTCAACCTTAAA | + |
Preference number: 2 (lower is better) Translates to: CLERPVLPCGLLPQTMWTISGQD*AHVNLK Trigger: TTTAAGGTTGACATGGGCTCAATCTTGGCCTGAGAT...AGTCCACATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR TCA 90 bp | AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCCTAAGCAATTTTACCTaGGCCCTGTCTTGCATGCTG | + |
Preference number: 2 (lower is better) Translates to: NSDLSLLQRLRRPYCTTALSNFT*ALSCML Trigger: CAGCATGCAAGACAGGGCTCAGGTAAAATTGCTTAG...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR TCA 90 bp | AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGTCCCAGGAAGGAAGGTaGGAGGGAGCCATGCAAGGG | + |
Preference number: 2 (lower is better) Translates to: KNLNALAQTFTTVEVEAESQEGR*EGAMQG Trigger: CCCTTGCATGGCTCCCTCTCACCTTCCTTCCTGGGA...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR TCA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAAGACCAGGGTGGCCTTaGACTCAGAAATCTGCCTGC | + |
Preference number: 2 (lower is better) Translates to: CLPITGITAACHYTFHFLRPGWP*TQKSAC Trigger: GCAGGCAGATTTCTGAGTTCAAGGCCACCCTGGTCT...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CCA 90 bp | GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCACATAGATGTGTTTATTaGTGGGTTATTTGCCAGTGT | + |
Preference number: 2 (lower is better) Translates to: VVELSWTLPGRKVRGSHAHRCVY*WVICQC Trigger: ACACTGGCAAATAACCCACCAATAAACACATCTATG...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CCA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAGTGGTGGAACTTTCCTaGACCCTCCCAGGAAGGAAG | + |
Preference number: 2 (lower is better) Translates to: CLPITGITAACHYTFHFLVVELS*TLPGRK Trigger: CTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CCA 90 bp | AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCCTATATAGTCCAGGCTaGCCTTGGGTTCTTAATGCT | + |
Preference number: 2 (lower is better) Translates to: NSDLSLLQRLRRPYCTTALYSPG*PWVLNA Trigger: AGCATTAAGAACCCAAGGCCAGCCTGGACTATATAG...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR GCA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTACTGGAATTACAGGGGTaGACCACCACACCTAGCATT | + |
Preference number: 2 (lower is better) Translates to: CLPITGITAACHYTFHFLLELQG*TTTPSI Trigger: AATGCTAGGTGTGGTGGTGCACCCCTGTAATTCCAG...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CCA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAAGCATGATCTTGGATTaGGAGTCACGAGCCAAGGGA | + |
Preference number: 2 (lower is better) Translates to: CLPITGITAACHYTFHFLSMILD*ESRAKG Trigger: TCCCTTGGCTCGTGACTCCCAATCCAAGATCATGCT...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR GCA 90 bp | AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCTTTGCTTTGGTGTTCTaGCTACCAACTAAACATCTG | + |
Preference number: 2 (lower is better) Translates to: NSDLSLLQRLRRPYCTTAFALVF*LPTKHL Trigger: CAGATGTTTAGTTGGTAGGCAGAACACCAAAGCAAA...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR GCA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTACCCATTTGTGTTTTGTaGTTCTTCTCCCGGTCATGG | + |
Preference number: 2 (lower is better) Translates to: CLPITGITAACHYTFHFLPICVL*FFSRSW Trigger: CCATGACCGGGAGAAGAAGCACAAAACACAAATGGG...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR GCA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAGACGTCACTAGTGAGTaGAAAAGAAGTGCTCCCCTT | + |
Preference number: 2 (lower is better) Translates to: CLPITGITAACHYTFHFLDVTSE*KRSAPL Trigger: AAGGGGAGCACTTCTTTTGCACTCACTAGTGACGTC...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CCA 90 bp | CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATTTCCAATTTTATCATTaGAAAGCACTTGGGAGAGAG | + |
Preference number: 2 (lower is better) Translates to: PKDRILQTGSPYLPLLCNFQFYH*KALGRE Trigger: CTCTCTCCCAAGTGCTTTCCAATGATAAAATTGGAA...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CAA 90 bp | TTCACCTTAATTTTACAAGCTAAGCAATTTTACCTGAGCCCTGTCTaGCATGCTGCTTGGAGAGACCTGTGCTACCCTGTGGCTTACTTC | + |
Preference number: 2 (lower is better) Translates to: FTLILQAKQFYLSPV*HAAWRDLCYPVAYF Trigger: GAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCAGCATGCAAGACAGGGCTCAGGTAAAATTGCTTAGCTTGTAAAATTAAGGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR TCA 90 bp | AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTATTCCATTCCAGCCTTaGCAAGGCAAGAGGAGAGGC | + |
Preference number: 2 (lower is better) Translates to: NLNLNFQLSTHCWAPKGSIPFQP*QGKRRG Trigger: GCCTCTCCTCTTGCCTTGTCAAGGCTGGAATGGAAT...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR TCA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAGTTAGCATAGTCAAATaGCTTGGAAGCCTAACCCTC | + |
Preference number: 2 (lower is better) Translates to: CLPITGITAACHYTFHFLVSIVK*LGSLTL Trigger: GAGGGTTAGGCTTCCAAGTCATTTGACTATGCTAAC...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR TCA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTACTGGGAGAGTCACCGTaGATCAGTTTTGTTACAACA | + |
Preference number: 2 (lower is better) Translates to: CLPITGITAACHYTFHFLLGESP*ISFVTT Trigger: TGTTGTAACAAAACTGATTCACGGTGACTCTCCCAG...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR GCA 90 bp | CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATAACAAAGAACCTGAATaGTTTAGCTCAAACCTTTAC | + |
Preference number: 2 (lower is better) Translates to: PKDRILQTGSPYLPLLCNNKEPE*FSSNLY Trigger: GTAAAGGTTTGAGCTAAAGCATTCAGGTTCTTTGTT...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR GCA 90 bp | AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTCTGTGTAGCCCTGGCTaGTTCCTGAGTGCTGGAATT | + |
Preference number: 2 (lower is better) Translates to: NLNLNFQLSTHCWAPKGSLCSPG*FLSAGI Trigger: AATTCCAGCACTCAGGAAGCAGCCAGGGCTACACAG...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR GCA 90 bp | AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTTTGAACTCAGAAATCTaGCTGCCTCTGCCTCCCGAG | + |
Preference number: 2 (lower is better) Translates to: NLNLNFQLSTHCWAPKGSLNSEI*LPLPPE Trigger: CTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCAA...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CCA 90 bp | AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTTTCTTCTCCCGGTCATaGTTAACTGTCCCGGGCTCT | + |
Preference number: 2 (lower is better) Translates to: NLNLNFQLSTHCWAPKGSFFSRS*LTVPGS Trigger: AGAGCCCGGGACAGTTAACCATGACCGGGAGAAGAA...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CCA 90 bp | AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGGACCACAAGAAAATGTaGGGCTGGAGAGATGGCTCA | + |
Preference number: 2 (lower is better) Translates to: KNLNALAQTFTTVEVEAEDHKKM*GWRDGS Trigger: TGAGCCATCTCTCCAGCCCCACATTTTCTTGTGGTC...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
||
3UTR-3UTR TCA 90 bp | AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTCCCTCATATTTTTCCTaGGGTCCCACTAGTTCCAGC | + |
Preference number: 2 (lower is better) Translates to: NLNLNFQLSTHCWAPKGSPSYFS*GPTSSS Trigger: GCTGGAACTAGTGGGACCTCAGGAAAAATATGAGGG...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
||
3UTR-3UTR GCA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTACTTGAACATTTCATGTaGATCTGTCTCCTCTCTCCT | + |
Preference number: 2 (lower is better) Translates to: CLPITGITAACHYTFHFLLEHFM*ICLLSP Trigger: AGGAGAGAGGAGACAGATGCACATGAAATGTTCAAG...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
||
3UTR-3UTR CCA 90 bp | AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGAAGAAAATGTGGGGCTaGAGAGATGGCTCAGTGGTT | + |
Preference number: 2 (lower is better) Translates to: KNLNALAQTFTTVEVEAEKKMWG*RDGSVV Trigger: AACCACTGAGCCATCTCTCCAGCCCCACATTTTCTT...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CCA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAAAACCTTTACAACTGTaGAAGTTGAGGCAGAGGTCA | + |
Preference number: 2 (lower is better) Translates to: CLPITGITAACHYTFHFLKPLQL*KLRQRS Trigger: TGACCTCTGCCTCAACTTCCACAGTTGTAAAGGTTT...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
||
3UTR-3UTR CCA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTATTCTGCCCTCCAGTGTaGGCTTTGATACAAAGAATA | + |
Preference number: 2 (lower is better) Translates to: CLPITGITAACHYTFHFLFCPPV*ALIQRI Trigger: TATTCTTTGTATCAAAGCCCACACTGGAGGGCAGAA...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
||
3UTR-3UTR GCA 90 bp | GCAGAGGTCAATCAGCATGATCTTGGATTGGGAGTCACGAGCCAAGGGAAAAAGCTGTGTCCGTTCATATaGTGTCATTATTTTATAGTC | + |
Preference number: 2 (lower is better) Translates to: AEVNQHDLGLGVTSQGKKLCPFI*CHYFIV Trigger: GACTATAAAATAATGACAGCATATGAACGGACACAG...CTTTTTCCCTTGGCTCGTGACTCCCAATCCAAGATCATGCTGATTGACCTCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
||
3UTR-3UTR GCA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAGTTTTCTTGGATCTTTaGAACTGGAACTTTGGGGAT | + |
Preference number: 2 (lower is better) Translates to: CLPITGITAACHYTFHFLVFLDL*NWNFGD Trigger: ATCCCCAAAGTTCCAGTTGCAAAGATCCAAGAAAAC...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
||
3UTR-3UTR TCA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTATATGATTACTTTACCTaGAAAGTAGAAGCTGTGTCC | + |
Preference number: 2 (lower is better) Translates to: CLPITGITAACHYTFHFLYDYFT*KVEAVS Trigger: GGACACAGCTTCTACTTTTCAGGTAAAGTAATCATA...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
||
3UTR-3UTR GCA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTATCTCTTGGCAACTTGTaGTTTTATGCAAATAGCATG | + |
Preference number: 2 (lower is better) Translates to: CLPITGITAACHYTFHFLSLGNL*FYANSM Trigger: CATGCTATTTGCATAAAAGCACAAGTTGCCAAGAGA...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
||
3UTR-3UTR CCA 90 bp | CCACATGGTGGCTCACAACCATTCATAATGGAATCTGACTCCCTCTTCTGGAGTAGATGTGTTTATTGGTaGGTTATTTGCCAGTGTTTT | + |
Preference number: 2 (lower is better) Translates to: PHGGSQPFIMESDSLFWSRCVYW*VICQCF Trigger: AAAACACTGGCAAATAACCCACCAATAAACACATCT...ACTCCAGAAGAGGGAGTCAGATTCCATTATGAATGGTTGTGAGCCACCATGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CCA 90 bp | AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTCTCTCTCCCTTCTCTTaGCAACTTGTGCTTTTATGC | + |
Preference number: 2 (lower is better) Translates to: NLNLNFQLSTHCWAPKGSLSPFS*QLVLLC Trigger: GCATAAAAGCACAAGTTGCCAAGAGAAGGGAGAGAG...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
||
3UTR CAA 90 bp | CATCACCTTTCAGTTATAATGGCCTTCTGCCCTCCAGTGTGGGCTTaGATACAAAGAATATTATTACTAATTTGCCTCAGTGATTTAGTT | + |
Preference number: 2 (lower is better) Translates to: HHLSVIMAFCPPVWA*IQRILLLICLSDLV Trigger: AACTAAATCACTGAGGCAAATTAGTAATAATATTCTTTGTATCAAAGCCCACACTGGAGGGCAGAAGGCCATTATAACTGAAAGGTGATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR GCA 72 bp | CTTCTTCTCCCGGTCATGGTTAACTGTCCCGGGCTCTaGGCTTCCCATCTGTCGTCCCTAGTGCACGCGCCC | + |
Preference number: 3 (lower is better) Translates to: LLLPVMVNCPGL*ASHLSSLVHAP Trigger: GGGCGCGTGCACTAGGGACGACAGATGGGAAGCGCAGAGCCCGGGACAGTTAACCATGACCGGGAGAAGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR GCA 72 bp | CCTGCCTCTGCCTCCCGAGTGTTGGGATTAAAGGCGTaGGCCACCATGGCGCTCCTGGTCTTTTTCTTTTGG | + |
Preference number: 3 (lower is better) Translates to: PASASRVLGLKA*ATMALLVFFFW Trigger: CCAAAAGAAAAAGACCAGGAGCGCCATGGTGGCGCACGCCTTTAATCCCAACACTCGGGAGGCAGAGGCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CCA 72 bp | CCACCGCCCACCACCAGGCTCTCTGGGGCAGATCCTTaGCATGTTCATAACCACTGTCCTGTTGGGTACTTC | + |
Preference number: 3 (lower is better) Translates to: PPPTTRLSGADP*HVHNHCPVGYF Trigger: GAAGTACCCAACAGGACAGTGGTTATGAACATGCCAAGGATCTGCCCCAGAGAGCCTGGTGGTGGGCGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR TCA 72 bp | CTGGCTGTTCTGCAACTCTGTAGACCAGGCTGGCCTTaGACTCAGTGGTCTGCACATGTCACCATGCCTAGC | + |
Preference number: 3 (lower is better) Translates to: LAVLQLCRPGWP*TQWSAHVTMPS Trigger: GCTAGGCATGGTGACATGTGCAGACCACTGAGTTCAAGGCCAGCCTGGTCTACAGAGTTGCAGAACAGCCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR GCA 72 bp | CTGAGCCCTGTCTTGCATGCTGCTTGGAGAGACCTGTaGTACCCTGTGGCTTACTTCCCCAAACCATGTGGA | + |
Preference number: 3 (lower is better) Translates to: LSPVLHAAWRDL*YPVAYFPKPCG Trigger: TCCACATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCAGCATGCAAGACAGGGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR GCA 72 bp | CATTCCAGCCTTGACAAGGCAAGAGGAGAGGCAATATaGACACGAGGTGGTGGAACTTTCCTGGACCCTCCC | + |
Preference number: 3 (lower is better) Translates to: HSSLDKARGEAI*TRGGGTFLDPP Trigger: GGGAGGGTCCAGGAAAGTTCCACCACCTCGTGTGCATATTGCCTCTCCTCTTGCCTTGTCAAGGCTGGAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CCA 72 bp | CTGTGGCTGTGCACACACGCTTGTGACACTGGCACTTaGGAAGCAGACAGGAGGGTCATAAGTTCAAGGCCA | + |
Preference number: 3 (lower is better) Translates to: LWLCTHACDTGT*EADRRVISSRP Trigger: TGGCCTTGAACTTATGACCCTCCTGTCTGCTTCCCAAGTGCCAGTGTCACAAGCGTGTGTGCACAGCCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CCA 72 bp | CTAGGACCACAGACAGATGTCACCGTGCCTGGCCTCTaGCTTTGCTCTTTGGGGGAGTTTCTCTTCCTTCCT | + |
Preference number: 3 (lower is better) Translates to: LGPQTDVTVPGL*LCSLGEFLFLP Trigger: AGGAAGGAAGAGAAACTCCCCCAAAGAGCAAAGCCAGAGGCCAGGCACGGTGACATCTGTCTGTGGTCCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR GCA 72 bp | CCACAGACAGATGTCACCGTGCCTGGCCTCTGGCTTTaGTCTTTGGGGGAGTTTCTCTTCCTTCCTCTCTTT | + |
Preference number: 3 (lower is better) Translates to: PQTDVTVPGLWL*SLGEFLFLPLF Trigger: AAAGAGAGGAAGGAAGAGAAACTCCCCCAAAGAGCAAAGCCAGAGGCCAGGCACGGTGACATCTGTCTGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CCA 72 bp | GAGCCCATTTGTGTTTTGTGCTTCTTCTCCCGGTCATaGTTAACTGTCCCGGGCTCTGCGCTTCCCATCTGT | + |
Preference number: 3 (lower is better) Translates to: EPICVLCFFSRS*LTVPGSALPIC Trigger: ACAGATGGGAAGCGCAGAGCCCGGGACAGTTAACCATGACCGGGAGAAGAAGCACAAAACACAAATGGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CAA 90 bp | GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCATCTCTCTCCCTTCTCTaGGCAACTTGTGCTTTTATG | + |
Preference number: 3 (lower is better) Translates to: VVELSWTLPGRKVRGSHASLSLL*ATCAFM Trigger: CATAAAAGCACAAGTTGCCAAGAGAAGGGAGAGAGA...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CAA 90 bp | GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCATGCTCAAGAGCCCATTaGTGTTTTGTGCTTCTTCTC | + |
Preference number: 3 (lower is better) Translates to: VVELSWTLPGRKVRGSHACSRAH*CFVLLL Trigger: GAGAAGAAGCACAAAACACAAATGGGCTCTTGAGCA...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CAA 90 bp | AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCTGTCTTGCATGCTGCTaGGAGAGACCTGTGCTACCC | + |
Preference number: 3 (lower is better) Translates to: NSDLSLLQRLRRPYCTTACLACC*ERPVLP Trigger: GGGTAGCACAGGTCTCTCCAAGCAGCATGCAAGACA...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR TCA 72 bp | GGCTTTCTACGCTCAGACTCTCCCTCATATTTTTCCTaGGGTCCCACTAGTTCCAGCCACCTTACCAGGCAC | + |
Preference number: 3 (lower is better) Translates to: GFLRSDSPSYFS*GPTSSSHLTRH Trigger: GTGCCTGGTAAGGTGGCTGGAACTAGTGGGACCTCAGGAAAAATATGAGGGAGAGTCTGAGCGTAGAAAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CCA 72 bp | TCTTGCATGCTGCTTGGAGAGACCTGTGCTACCCTGTaGCTTACTTCCCCAAACCATGTGGACTACGTAGGA | + |
Preference number: 3 (lower is better) Translates to: SCMLLGETCATL*LTSPNHVDYVG Trigger: TCCTACGTAGTCCACATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCAGCATGCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CCA 72 bp | AAGCAATTTTACCTGAGCCCTGTCTTGCATGCTGCTTaGAGAGACCTGTGCTACCCTGTGGCTTACTTCCCC | + |
Preference number: 3 (lower is better) Translates to: KQFYLSPVLHAA*RDLCYPVAYFP Trigger: GGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCAGCATGCAAGACAGGGCTCAGGTAAAATTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR TCA 72 bp | AGACAGGAGGGTCATAAGTTCAAGGCCAGGCTGGGCTaGGGCCCTGTCTTCAAAACAAAACAAATCCCTAGC | + |
Preference number: 3 (lower is better) Translates to: RQEGHKFKARLG*GPVFKTKQIPS Trigger: GCTAGGGATTTGTTTTGTTTTGAAGACAGGGCCTCAGCCCAGCCTGGCCTTGAACTTATGACCCTCCTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR TCA 72 bp | GGAGCACAGCCTCACGTGATCCTAAGTGTCCTATGCTaGAAGGCACTTCTTTGTAGATGGAGTGGAACGTCA | + |
Preference number: 3 (lower is better) Translates to: GAQPHVILSVLC*KALLCRWSGTS Trigger: TGACGTTCCACTCCATCTACAAAGAAGTGCCTTTCAGCATAGGACACTTAGGATCACGTGAGGCTGTGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR GCA 72 bp | AGCCTGCCTCTGCCTCCCAATTACTGGGATTACAGCTaGGTGTCACTACACGTTTCATTTCCTAAGATAGGG | + |
Preference number: 3 (lower is better) Translates to: SLPLPPNYWDYS*VSLHVSFPKIG Trigger: CCCTATCTTAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCAGAGGCAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR GCA 72 bp | ACTTTAAAAATATGGAAAATTAGCTGGGCATGGTGGTaGACTGTTGCAGTCCCAGCACTCCCAAAGGAGGGC | + |
Preference number: 3 (lower is better) Translates to: TLKIWKISWAWW*TVAVPALPKEG Trigger: GCCCTCCTTTGGGAGTGCTGGGACTGCAACAGTGCACCACCATGCCCAGCTAATTTTCCATATTTTTAAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR GCA 72 bp | GATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTaGACCACTGCCACACAGAAAAAGACAAAACTCAAG | + |
Preference number: 3 (lower is better) Translates to: DLSLLQRLRRPY*TTATQKKTKLK Trigger: CTTGAGTTTTGTCTTTTTCTGTGTGGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CAA 90 bp | TGCTTGGAGAGACCTGTGCTACCCTGTGGCTTACTTCCCCAAACCATGTGGACTTTCAGTGCACCTCACTaGCCTAATAAGTTTGTCAAT | + |
Preference number: 3 (lower is better) Translates to: CLERPVLPCGLLPQTMWTFSAPH*PNKFVN Trigger: ATTGACAAACTTATTAGGCAAGTGAGGTGCACTGAA...AGTCCACATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CAA 90 bp | AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCCCTTCTCTTGGCAACTaGTGCTTTTATGCAAATAGC | + |
Preference number: 3 (lower is better) Translates to: NSDLSLLQRLRRPYCTTAPSLGN*CFYANS Trigger: GCTATTTGCATAAAAGCACAAGTTGCCAAGAGAAGG...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CAA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAGAGCCCATTTGTGTTTaGTGCTTCTTCTCCCGGTCA | + |
Preference number: 3 (lower is better) Translates to: CLPITGITAACHYTFHFLEPICV*CFFSRS Trigger: TGACCGGGAGAAGAAGCACAAAACACAAATGGGCTC...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CAA 90 bp | AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGTACCTGAGCCCTGTCTaGCATGCTGCTTGGAGAGAC | + |
Preference number: 3 (lower is better) Translates to: KNLNALAQTFTTVEVEAEYLSPV*HAAWRD Trigger: GTCTCTCCAAGCAGCATGCAAGACAGGGCTCAGGTA...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CAA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTATGGGGGCTTGCTTGCTaGTTTTCTTTCCCTTCCTTC | + |
Preference number: 3 (lower is better) Translates to: CLPITGITAACHYTFHFLWGLAC*FSFPSF Trigger: GAAGGAAGGGAAAGAAAACAAGCAAGCAAGCCCCCA...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR TCA 72 bp | ACCACATGGTGGCTCACAACCATTCATAATGGAATCTaGCTCCCTCTTCTGGAGTGTCTGAAGACAGCTACA | + |
Preference number: 3 (lower is better) Translates to: TTWWLTTIHNGI*LPLLECLKTAT Trigger: TGTAGCTGTCTTCAGACACTCCAGAAGAGGGAGTCAGATTCCATTATGAATGGTTGTGAGCCACCATGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CCA 72 bp | TTAAATAACGATGGCTGCATCCATCAGTGTGATGGATaGGACGTCACTAGTGAGTGCAAAAGAAGTGCTCCC | + |
Preference number: 3 (lower is better) Translates to: LNNDGCIHQCDG*DVTSECKRSAP Trigger: GGGAGCACTTCTTTTGCACTCACTAGTGACGTCCCATCCATCACACTGATGGATGCAGCCATCGTTATTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR GCA 72 bp | ATCCATCAGTGTGATGGATGGGACGTCACTAGTGAGTaGAAAAGAAGTGCTCCCCTTCAAACAAGACAGTTT | + |
Preference number: 3 (lower is better) Translates to: IHQCDGWDVTSE*KRSAPLQTRQF Trigger: AAACTGTCTTGTTTGAAGGGGAGCACTTCTTTTGCACTCACTAGTGACGTCCCATCCATCACACTGATGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CCA 72 bp | ACAGTACTGAAGCAATGGATGCTGGCTTTCCTAATCTaGGGTGTAAATGGCAAATGCTTAACAAGGATGGTG | + |
Preference number: 3 (lower is better) Translates to: TVLKQWMLAFLI*GVNGKCLTRMV Trigger: CACCATCCTTGTTAAGCATTTGCCATTTACACCCCAGATTAGGAAAGCCAGCATCCATTGCTTCAGTACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CCA 72 bp | GCCTTCCCTGATGATCAGCACATTGACACATTTGAATaGACCCAAGTACTGAATTGTATGTCCACATCACCT | + |
Preference number: 3 (lower is better) Translates to: AFPDDQHIDTFE*TQVLNCMSTSP Trigger: AGGTGATGTGGACATACAATTCAGTACTTGGGTCCATTCAAATGTGTCAATGTGCTGATCATCAGGGAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CAA 90 bp | AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTATAACCACTGTCCTGTaGGGTACTTCACAGTCACAG | + |
Preference number: 3 (lower is better) Translates to: NLNLNFQLSTHCWAPKGSITTVL*GTSQSQ Trigger: CTGTGACTGTGAAGTACCCAACAGGACAGTGGTTAT...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR TCA 72 bp | TGGAAAGCACTTGGGAGAGAGGATGGTGAACACATTTaGGGAACTGATCAAAACAGATCAATAGGATTAGGG | + |
Preference number: 3 (lower is better) Translates to: WKALGREDGEHI*GTDQNRSIGLG Trigger: CCCTAATCCTATTGATCTGTTTTGATCAGTTCCTCAAATGTGTTCACCATCCTCTCTCCCAAGTGCTTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CAA 90 bp | AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTCATAGCCTTTTTGCTTaGGTGTTCTGCCTACCAACT | + |
Preference number: 3 (lower is better) Translates to: NLNLNFQLSTHCWAPKGSHSLFA*VFCLPT Trigger: AGTTGGTAGGCAGAACACCAAAGCAAAAAGGCTATG...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CAA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTATCCTTACACTACTCTTaGATGTCTGGCTTTGTTAAA | + |
Preference number: 3 (lower is better) Translates to: CLPITGITAACHYTFHFLSLHYS*MSGFVK Trigger: TTTAACAAAGCCAGACATCAAAGAGTAGTGTAAGGA...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CAA 90 bp | AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTTTGAGTCCTAGCCTTTaGCTGTCTTGTTTCTACCTC | + |
Preference number: 3 (lower is better) Translates to: NLNLNFQLSTHCWAPKGSLSPSL*LSCFYL Trigger: GAGGTAGAAACAAGACAGCAAAAGGCTAGGACTCAA...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
||
3UTR-3UTR CAA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAAACACTGACCAACTTTaGTTTATAAGCAGATGCCTT | + |
Preference number: 3 (lower is better) Translates to: CLPITGITAACHYTFHFLNTDQL*FISRCL Trigger: AAGGCATCTGCTTATAAACAAAAGTTGGTCAGTGTT...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
||
3UTR TCA 72 bp | CTTGCTCTTTTCTCGGGGAGATTTGCTCAGGAAATCTaGCTTCTTCAGCTCATTAGTTCCATAACCAATATG | + |
Preference number: 3 (lower is better) Translates to: LALFSGRFAQEI*LLQLISSITNM Trigger: CATATTGGTTATGGAACTAATGAGCTGAAGAAGTCAGATTTCCTGAGCAAATCTCCCCGAGAAAAGAGCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR GCA 72 bp | GTATGTCCACATCACCTTTCAGTTATAATGGCCTTCTaGCCTCCAGTGTGGGCTTTGATACAAAGAATATTA | + |
Preference number: 3 (lower is better) Translates to: VCPHHLSVIMAF*PPVWALIQRIL Trigger: TAATATTCTTTGTATCAAAGCCCACACTGGAGGGCAGAAGGCCATTATAACTGAAAGGTGATGTGGACATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR GCA 72 bp | ATCACAAGTCAACTGCTCTACAAGACAACAACAACATaGTTAGGCTGTAATATAGCTTTGGCACAGAGTAGG | + |
Preference number: 3 (lower is better) Translates to: ITSQLLYKTTTT*LGCNIALAQSR Trigger: CCTACTCTGTGCCAAAGCTATATTACAGCCTAAGCATGTTGTTGTTGTCTTGTAGAGCAGTTGACTTGTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CAA 90 bp | AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGCCCTTCAGACATAACTaGAACATTTCATGTGCATCT | + |
Preference number: 3 (lower is better) Translates to: KNLNALAQTFTTVEVEAEPFRHN*NISCAS Trigger: AGATGCACATGAAATGTTCAAGTTATGTCTGAAGGG...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CAA 90 bp | AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTATTTCTCTAGGGTCTTaGCTGTTTCCAGAAGGGAAA | + |
Preference number: 3 (lower is better) Translates to: NLNLNFQLSTHCWAPKGSISLGS*LFPEGK Trigger: TTTCCCTTCTGGAAACAGCAAAGACCCTAGAGAAAT...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CCA 72 bp | GAAACAACTCATTTAATGACTCGTGACAATCAAGTGTaGCTTTCTACGCTCAGACTCTCCCTCATATTTTTC | + |
Preference number: 3 (lower is better) Translates to: ETTHLMTRDNQV*LSTLRLSLIFF Trigger: GAAAAATATGAGGGAGAGTCTGAGCGTAGAAAGCCACACTTGATTGTCACGAGTCATTAAATGAGTTGTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CCA 72 bp | AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTaGGCCCCCAAAGGAAGTAACTATCCTGCCAAACTT | + |
Preference number: 3 (lower is better) Translates to: NLNLNFQLSTHC*APKGSNYPAKL Trigger: AAGTTTGGCAGGATAGTTACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CCA 72 bp | TTCTTTTGCAATAAGACTGCCTTTGAGGAGTTTGCCTaGAAATCTACAGATACGTTCATAGATGGGACTATC | + |
Preference number: 3 (lower is better) Translates to: FFCNKTAFEEFA*KSTDTFIDGTI Trigger: GATAGTCCCATCTATGAACGTATCTGTAGATTTCCAGGCAAACTCCTCAAAGGCAGTCTTATTGCAAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR-3UTR CAA 90 bp | AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTCATTTGCTTGCGAAATaGTTGTTAGCACACACTAAA | + |
Preference number: 3 (lower is better) Translates to: NLNLNFQLSTHCWAPKGSHLLAK*LLAHTK Trigger: TTTAGTGTGTGCTAACAACAATTTCGCAAGCAAATG...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR TCA 72 bp | GGAATGGAACAGACATTATCATCAAACATACCGTTCTaGAGCAAGTGTCATAGCTGGGTAAAGCTAGATTAT | + |
Preference number: 3 (lower is better) Translates to: GMEQTLSSNIPF*SKCHSWVKLDY Trigger: ATAATCTAGCTTTACCCAGCTATGACACTTGCTTCAGAACGGTATGTTTGATGATAATGTCTGTTCCATTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR GCA 72 bp | AGAACCTTCTCCACTGTTCTTTTACTTAGAAGACAGTaGATACTGTTCTCCTTAAAGCATTACTTAACGACC | + |
Preference number: 3 (lower is better) Translates to: RTFSTVLLLRRQ*ILFSLKHYLTT Trigger: GGTCGTTAAGTAATGCTTTAAGGAGAACAGTATGCACTGTCTTCTAAGTAAAAGAACAGTGGAGAAGGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CCA 72 bp | AATACCACGAGAGCAAAGAGCAATGCTTTTAAACTGTaGTCCACAATCAAAGCCTTACTTTTCACTACAGAT | + |
Preference number: 3 (lower is better) Translates to: NTTRAKSNAFKL*STIKALLFTTD Trigger: ATCTGTAGTGAAAAGTAAGGCTTTGATTGTGGACCACAGTTTAAAAGCATTGCTCTTTGCTCTCGTGGTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CCA 72 bp | CATTTCCATAAGAGCTACATTATCTTGTTAAGGAACTaGCCTTGGATTTTCTTTCTCGGTACCCATCTCTTT | + |
Preference number: 3 (lower is better) Translates to: HFHKSYIILLRN*PWIFFLGTHLF Trigger: AAAGAGATGGGTACCGAGAAAGAAAATCCAAGGCCAGTTCCTTAACAAGATAATGTAGCTCTTATGGAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR TCA 72 bp | TTGTTTATTAAGAAATTGCAGAAATGGGCCTTCAAATaGAGAGTGTCACGAATAGAGGGAAAAGATGCTATA | + |
Preference number: 3 (lower is better) Translates to: LFIKKLQKWAFK*RVSRIEGKDAI Trigger: TATAGCATCTTTTCCCTCTATTCGTGACACTCTTCATTTGAAGGCCCATTTCTGCAATTTCTTAATAAACAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR TCA 72 bp | AACAAATCCCTAGCTCTATCTACTAACTTGATAGAGTaGAACTGTTGGTTTAAGGAGAAAATACAACAGTCT | + |
Preference number: 3 (lower is better) Translates to: NKSLALSTNLIE*NCWFKEKIQQS Trigger: AGACTGTTGTATTTTCTCCTTAAACCAACAGTTTCACTCTATCAAGTTAGTAGATAGAGCTAGGGATTTGTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CAA 72 bp | GAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGTaGGGATTAAAGGCGTGCGCCACCATGGCGCTCCTG | + |
Preference number: 4 (lower is better) Translates to: ELRNLPASASRV*GLKACATMALL Trigger: CAGGAGCGCCATGGTGGCGCACGCCTTTAATCCCAACACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CCA 90 bp | GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCAAAGCCCCACTCTCTTTaGTTGTTGAGCTGCTGCAGG | + |
Preference number: 4 (lower is better) Translates to: VVELSWTLPGRKVRGSHAKPHSL*LLSCCR Trigger: CCTGCAGCAGCTCAACAACCAAAGAGAGTGGGGCTT...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR GCA 90 bp | GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCAGCTGAGGTTCAGTTGTaGAGTACTGTGCTGATGGTT | + |
Preference number: 4 (lower is better) Translates to: VVELSWTLPGRKVRGSHAAEVQL*STVLMV Trigger: AACCATCAGCACAGTACTGCACAACTGAACCTCAGC...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR GCA 90 bp | CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATTCTTGCTGCTCTGCCTaGTGGAGGCAGAAGACGAAC | + |
Preference number: 4 (lower is better) Translates to: PKDRILQTGSPYLPLLCNSCCSA*WRQKTN Trigger: GTTCGTCTTCTGCCTCCAGCAGGCAGAGCAGCAAGA...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CAA 72 bp | ACCACAGACAGATGTCACCGTGCCTGGCCTCTGGCTTaGCTCTTTGGGGGAGTTTCTCTTCCTTCCTCTCTT | + |
Preference number: 4 (lower is better) Translates to: TTDRCHRAWPLA*LFGGVSLPSSL Trigger: AAGAGAGGAAGGAAGAGAAACTCCCCCAAAGAGCAAAGCCAGAGGCCAGGCACGGTGACATCTGTCTGTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR GCA 90 bp | CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATCCCCAAAAATCATCTTaGTGCTCTGCCTGCTGGAGG | + |
Preference number: 4 (lower is better) Translates to: PKDRILQTGSPYLPLLCNPQKSS*CSACWR Trigger: CCTCCAGCAGGCAGAGCAGCAAGATGATTTTTGGGG...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR GCA 90 bp | TGCTTGGAGAGACCTGTGCTACCCTGTGGCTTACTTCCCCAAACCATGTGGACTTCCCCACCAGACAGGTaGGAGATCATATGCCGTACA | + |
Preference number: 4 (lower is better) Translates to: CLERPVLPCGLLPQTMWTSPPDR*EIICRT Trigger: TGTACGGCATATGATCTCGCACCTGTCTGGTGGGGA...AGTCCACATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CCA 90 bp | GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCATTGTGTAGACGCAACTaGCGCTCTCTTAAAAACTGC | + |
Preference number: 4 (lower is better) Translates to: VVELSWTLPGRKVRGSHALCRRN*RSLKNC Trigger: GCAGTTTTTAAGAGAGCGCCAGTTGCGTCTACACAA...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR GCA 90 bp | CCACATGGTGGCTCACAACCATTCATAATGGAATCTGACTCCCTCTTCTGGAGTGCTGCAGGACATAGCTaGTGTGGCTGGGCTTTGCCA | + |
Preference number: 4 (lower is better) Translates to: PHGGSQPFIMESDSLFWSAAGHS*CGWALP Trigger: TGGCAAAGCCCAGCCACAGCAGCTATGTCCTGCAGC...ACTCCAGAAGAGGGAGTCAGATTCCATTATGAATGGTTGTGAGCCACCATGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR GCA 90 bp | CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATCAAAAATCATCTTGCTaGTCTGCCTGCTGGAGGCAG | + |
Preference number: 4 (lower is better) Translates to: PKDRILQTGSPYLPLLCNQKSSC*SACWRQ Trigger: CTGCCTCCAGCAGGCAGAGCAGCAAGATGATTTTTG...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CCA 90 bp | TGCTTGGAGAGACCTGTGCTACCCTGTGGCTTACTTCCCCAAACCATGTGGACTCATCAGGCGCCTGGTTaGCGTCTTCTCTGTATTTGT | + |
Preference number: 4 (lower is better) Translates to: CLERPVLPCGLLPQTMWTHQAPG*RLLCIC Trigger: ACAAATACAGAGAAGACGCCAACCAGGCGCCTGATG...AGTCCACATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CCA 90 bp | GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCACCCTTGAACATATCTTaGTCTAGGCAGCTAGACATA | + |
Preference number: 4 (lower is better) Translates to: VVELSWTLPGRKVRGSHAPLNIS*SRQLDI Trigger: TATGTCTAGCTGCCTAGACCAAGATATGTTCAAGGG...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR TCA 90 bp | GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCATTTCGGAAGTTTCCTTaGTCACAAATGGAACAGACA | + |
Preference number: 4 (lower is better) Translates to: VVELSWTLPGRKVRGSHAFRKFP*SQMEQT Trigger: TGTCTGTTCCATTTGTGATCAAGGAAACTTCCGAAA...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR GCA 90 bp | CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATATTGCCACTTTGAACTaGTCGAAACTGGAAGGAGCG | + |
Preference number: 4 (lower is better) Translates to: PKDRILQTGSPYLPLLCNIATLN*SKLEGA Trigger: CGCTCCTTCCAGTTTCGAGCAGTTCAAAGTGGCAAT...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR GCA 90 bp | GCAGAGGTCAATCAGCATGATCTTGGATTGGGAGTCACGAGCCAAGGGAAAAAGATCATCTTGCTGCTCTaGCTGCTGGAGGCAGAAGAC | + |
Preference number: 4 (lower is better) Translates to: AEVNQHDLGLGVTSQGKKIILLL*LLEAED Trigger: GTCTTCTGCCTCCAGCAGGCAGAGCAGCAAGATGAT...CTTTTTCCCTTGGCTCGTGACTCCCAATCCAAGATCATGCTGATTGACCTCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CCA 90 bp | AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCCCACACGTGTACAGATaGACATCCATATGCTGCTCC | + |
Preference number: 4 (lower is better) Translates to: NSDLSLLQRLRRPYCTTAPHVYR*TSICCS Trigger: GGAGCAGCATATGGATGTCCATCTGTACACGTGTGG...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR TCA 90 bp | TGCTTGGAGAGACCTGTGCTACCCTGTGGCTTACTTCCCCAAACCATGTGGACTAGTTCATTGCCACTTTaGACTGCTCGAAACTGGAAG | + |
Preference number: 4 (lower is better) Translates to: CLERPVLPCGLLPQTMWTSSLPL*TARNWK Trigger: CTTCCAGTTTCGAGCAGTTCAAAGTGGCAATGAACT...AGTCCACATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR TCA 90 bp | GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCACAGCAAGTTCAGCTTTaGTGTTACTATCTTTTCCAT | + |
Preference number: 4 (lower is better) Translates to: VVELSWTLPGRKVRGSHAQQVQL*CYYLFH Trigger: ATGGAAAAGATAGTAACATCAAAGCTGAACTTGCTG...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR TCA 90 bp | AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCGAAGCTGTCTGCCCTTaGCAAGTATCTGTCCACATT | + |
Preference number: 4 (lower is better) Translates to: NSDLSLLQRLRRPYCTTAEAVCP*QVSVHI Trigger: AATGTGGACAGATACTTGTCAAGGGCAGACAGCTTC...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR GCA 90 bp | TGCTTGGAGAGACCTGTGCTACCCTGTGGCTTACTTCCCCAAACCATGTGGACTCTGGAGGTAGTTCATTaGCACTTTGAACTGCTCGAA | + |
Preference number: 4 (lower is better) Translates to: CLERPVLPCGLLPQTMWTLEVVH*HFELLE Trigger: TTCGAGCAGTTCAAAGTGGCAATGAACTACCTCCAG...AGTCCACATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR GCA 90 bp | GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCAGTATTTGTCCGGCTGTaGAGAAAATGTTTTAGAAGA | + |
Preference number: 4 (lower is better) Translates to: VVELSWTLPGRKVRGSHAVFVRL*RKCFRR Trigger: TCTTCTAAAACATTTTCTGCACAGCCGGACAAATAC...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CCA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTATGCTGCTCTGCCTGCTaGAGGCAGAAGACGAACACT | + |
Preference number: 4 (lower is better) Translates to: CLPITGITAACHYTFHFLCCSAC*RQKTNT Trigger: AGTGTTCGTCTTCTGCCTCCAGCAGGCAGAGCAGCA...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CCA 90 bp | CCACATGGTGGCTCACAACCATTCATAATGGAATCTGACTCCCTCTTCTGGAGTTATTCACCGTTGAACTaGGCTCCGCACACCACCTGT | + |
Preference number: 4 (lower is better) Translates to: PHGGSQPFIMESDSLFWSYSPLN*APHTTC Trigger: ACAGGTGGTGTGCGGAGCCCAGTTCAACGGTGAATA...ACTCCAGAAGAGGGAGTCAGATTCCATTATGAATGGTTGTGAGCCACCATGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CCA 90 bp | GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCAATAGTATCTATAAAATaGCTCCTCGGGTTCATCTTC | + |
Preference number: 4 (lower is better) Translates to: VVELSWTLPGRKVRGSHAIVSIK*LLGFIF Trigger: GAAGATGAACCCGAGGAGCCATTTTATAGATACTAT...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CCA 90 bp | CCACATGGTGGCTCACAACCATTCATAATGGAATCTGACTCCCTCTTCTGGAGTCTGCATCCTCTTGTATaGGGCTGGTGTTATTCGGGG | + |
Preference number: 4 (lower is better) Translates to: PHGGSQPFIMESDSLFWSLHPLV*GWCYSG Trigger: CCCCGAATAACACCAGCCCCATACAAGAGGATGCAG...ACTCCAGAAGAGGGAGTCAGATTCCATTATGAATGGTTGTGAGCCACCATGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CAA 72 bp | CAAAGTCAGAAGCAGCAGGCAAATTCCATTCCAGCCTaGACAAGGCAAGAGGAGAGGCAATATGCACACGAG | + |
Preference number: 4 (lower is better) Translates to: QSQKQQANSIPA*TRQEERQYAHE Trigger: CTCGTGTGCATATTGCCTCTCCTCTTGCCTTGTCAAGGCTGGAATGGAATTTGCCTGCTGCTTCTGACTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CAA 72 bp | GGCGTGCGCCACCATGGCGCTCCTGGTCTTTTTCTTTaGGCACTGATTTATCTTTTGTTAGTGACAGGTTCC | + |
Preference number: 4 (lower is better) Translates to: GVRHHGAPGLFL*ALIYLLLVTGS Trigger: GGAACCTGTCACTAACAAAAGATAAATCAGTGCCAAAAGAAAAAGACCAGGAGCGCCATGGTGGCGCACGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR GCA 90 bp | AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCACAAGATGCATTCTCTaGATCCTCTTGTATGGGGCT | + |
Preference number: 4 (lower is better) Translates to: NSDLSLLQRLRRPYCTTATRCIL*ILLYGA Trigger: AGCCCCATACAAGAGGATGCAGAGAATGCATCTTGT...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR GCA 90 bp | TGCTTGGAGAGACCTGTGCTACCCTGTGGCTTACTTCCCCAAACCATGTGGACTAGACATACCTGGCCATaGCTTTGTGCATATCATTGT | + |
Preference number: 4 (lower is better) Translates to: CLERPVLPCGLLPQTMWTRHTWP*LCAYHC Trigger: ACAATGATATGCACAAAGGCATGGCCAGGTATGTCT...AGTCCACATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CCA 90 bp | CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATGCTCTTGTCGTGTTTTaGTATGAGTGTCTGTTGGTA | + |
Preference number: 4 (lower is better) Translates to: PKDRILQTGSPYLPLLCNALVVF*YECLLV Trigger: TACCAACAGACACTCATACCAAAACACGACAAGAGC...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CCA 90 bp | AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCTGGAACAGACATACCTaGCCATGCCTTTGTGCATAT | + |
Preference number: 4 (lower is better) Translates to: NSDLSLLQRLRRPYCTTAWNRHT*PCLCAY Trigger: ATATGCACAAAGGCATGGCCAGGTATGTCTGTTCCA...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CAA 72 bp | GAAGTTGAGGCAGAGGTCAATCAGCATGATCTTGGATaGGGAGTCACGAGCCAAGGGAAAAAGATAGAAGGG | + |
Preference number: 4 (lower is better) Translates to: EVEAEVNQHDLG*GVTSQGKKIEG Trigger: CCCTTCTATCTTTTTCCCTTGGCTCGTGACTCCCAATCCAAGATCATGCTGATTGACCTCTGCCTCAACTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CAA 72 bp | AAATATGGAAAATTAGCTGGGCATGGTGGTGCACTGTaGCAGTCCCAGCACTCCCAAAGGAGGGCTAAAAGA | + |
Preference number: 4 (lower is better) Translates to: KYGKLAGHGGAL*QSQHSQRRAKR Trigger: TCTTTTAGCCCTCCTTTGGGAGTGCTGGGACTGCAACAGTGCACCACCATGCCCAGCTAATTTTCCATATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR TCA 90 bp | AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCTGTGCAGTACTGTGCTaGTGGTTCATGAAAAACATC | + |
Preference number: 4 (lower is better) Translates to: NSDLSLLQRLRRPYCTTACAVLC*WFMKNI Trigger: GATGTTTTTCATGAACCATCAGCACAGTACTGCACA...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR TCA 90 bp | GCAGAGGTCAATCAGCATGATCTTGGATTGGGAGTCACGAGCCAAGGGAAAAAGTGTCGTGTTTTGGTATaGGTGTCTGTTGGTACAGGT | + |
Preference number: 4 (lower is better) Translates to: AEVNQHDLGLGVTSQGKKCRVLV*VSVGTG Trigger: ACCTGTACCAACAGACACTCATACCAAAACACGACA...CTTTTTCCCTTGGCTCGTGACTCCCAATCCAAGATCATGCTGATTGACCTCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR TCA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTACCTCCTCAGTTATTGTaGGTCCACACAGCTCACAAG | + |
Preference number: 4 (lower is better) Translates to: CLPITGITAACHYTFHFLPPQLL*VHTAHK Trigger: CTTGTGAGCTGTGTGGACTCACAATAACTGAGGAGG...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR GCA 90 bp | AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCAGGTGCGAGATCATATaGCGTACATGGTCATGTTTT | + |
Preference number: 4 (lower is better) Translates to: NSDLSLLQRLRRPYCTTARCEII*RTWSCF Trigger: AAAACATGACCATGTACGGCATATGATCTCGCACCT...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CCA 90 bp | CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATTGCAGGGATATCTTCTaGCTCCATCTTGATGATAAT | + |
Preference number: 4 (lower is better) Translates to: PKDRILQTGSPYLPLLCNCRDIF*LHLDDN Trigger: ATTATCATCAAGATGGAGCCAGAAGATATCCCTGCA...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR TCA 90 bp | GCAGAGGTCAATCAGCATGATCTTGGATTGGGAGTCACGAGCCAAGGGAAAAAGTTATCTTCATGTTGCTaGGGTTCAGTTGTGCAGTAC | + |
Preference number: 4 (lower is better) Translates to: AEVNQHDLGLGVTSQGKKLSSCC*GSVVQY Trigger: GTACTGCACAACTGAACCTCAGCAACATGAAGATAA...CTTTTTCCCTTGGCTCGTGACTCCCAATCCAAGATCATGCTGATTGACCTCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR GCA 90 bp | TGCTTGGAGAGACCTGTGCTACCCTGTGGCTTACTTCCCCAAACCATGTGGACTTGGACATCCATATGCTaGTCCAGTTGTTCATTATTT | + |
Preference number: 4 (lower is better) Translates to: CLERPVLPCGLLPQTMWTWTSIC*SSCSLF Trigger: AAATAATGAACAACTGGAGCAGCATATGGATGTCCA...AGTCCACATGGTTTGGGGAAGTAAGCCACAGGGTAGCACAGGTCTCTCCAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR GCA 90 bp | CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATCCTCAAATTAAACTTTaGTCCACATATTCCACACGT | + |
Preference number: 4 (lower is better) Translates to: PKDRILQTGSPYLPLLCNPQIKL*STYSTR Trigger: ACGTGTGGAATATGTGGAGCAAAGTTTAATTTGAGG...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
||
3UTR CAA 72 bp | ATTTTACAAGCTAAGCAATTTTACCTGAGCCCTGTCTaGCATGCTGCTTGGAGAGACCTGTGCTACCCTGTG | + |
Preference number: 4 (lower is better) Translates to: ILQAKQFYLSPV*HAAWRDLCYPV Trigger: CACAGGGTAGCACAGGTCTCTCCAAGCAGCATGCAAGACAGGGCTCAGGTAAAATTGCTTAGCTTGTAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CAA 72 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAGATaGATTCAGTATGTAGCCCTGGCTGTTCTGCAACTC | + |
Preference number: 4 (lower is better) Translates to: REREREREREKR*IQYVALAVLQL Trigger: GAGTTGCAGAACAGCCAGGGCTACATACTGAATCAATCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR GCA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAACACAGCTCACAAGATaGATTCTCTGCATCCTCTTG | + |
Preference number: 4 (lower is better) Translates to: CLPITGITAACHYTFHFLTQLTR*ILCILL Trigger: CAAGAGGATGCAGAGAATGCATCTTGTGAGCTGTGT...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CCA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAGGTATGAGTGTCTGTTaGTACAGGTCAGCACATGTT | + |
Preference number: 4 (lower is better) Translates to: CLPITGITAACHYTFHFLGMSVC*YRSAHV Trigger: AACATGTGCTGACCTGTACCAACAGACACTCATACC...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CAA 72 bp | AACAAAACAAAAGCTGCTCAAGAGCCCATTTGTGTTTaGTGCTTCTTCTCCCGGTCATGGTTAACTGTCCCG | + |
Preference number: 4 (lower is better) Translates to: NKTKAAQEPICV*CFFSRSWLTVP Trigger: CGGGACAGTTAACCATGACCGGGAGAAGAAGCACAAAACACAAATGGGCTCTTGAGCAGCTTTTGTTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR TCA 90 bp | AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGCTCTCTCATCCACGCTaGTGGACATACGAGGTTTTA | + |
Preference number: 4 (lower is better) Translates to: KNLNALAQTFTTVEVEAELSHPR*WTYEVL Trigger: TAAAACCTCGTATGTCCATCAGCGTGGATGAGAGAG...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR TCA 90 bp | GCAGAGGTCAATCAGCATGATCTTGGATTGGGAGTCACGAGCCAAGGGAAAAAGTTATTTGGGAATATCTaGAAGCAGACCTGGCATATA | + |
Preference number: 4 (lower is better) Translates to: AEVNQHDLGLGVTSQGKKLFGNI*KQTWHI Trigger: TATATGCCAGGTCTGCTTTCAGATATTCCCAAATAA...CTTTTTCCCTTGGCTCGTGACTCCCAATCCAAGATCATGCTGATTGACCTCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR GCA 90 bp | AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTGGGAAGTTGGCCAACTaGAAAGACTCTTCCTCAGGT | + |
Preference number: 4 (lower is better) Translates to: NLNLNFQLSTHCWAPKGSGKLAN*KDSSSG Trigger: ACCTGAGGAAGAGTCTTTGCAGTTGGCCAACTTCCC...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CAA 72 bp | AAGACAACAACAACATGCTTAGGCTGTAATATAGCTTaGGCACAGAGTAGGGACCAGAGAACGGTTCCTAGA | + |
Preference number: 4 (lower is better) Translates to: KTTTTCLGCNIA*AQSRDQRTVPR Trigger: TCTAGGAACCGTTCTCTGGTCCCTACTCTGTGCCAAAGCTATATTACAGCCTAAGCATGTTGTTGTTGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR GCA 90 bp | AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTCTGGCCATGCCTTTGTaGATATCATTGTGTAGACGC | + |
Preference number: 4 (lower is better) Translates to: NLNLNFQLSTHCWAPKGSLAMPL*ISLCRR Trigger: GCGTCTACACAATGATATGCACAAAGGCATGGCCAG...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR GCA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAAGATGGACATCCATATaGTGCTCCAGTTGTTCATTA | + |
Preference number: 4 (lower is better) Translates to: CLPITGITAACHYTFHFLRWTSI*CSSCSL Trigger: TAATGAACAACTGGAGCAGCATATGGATGTCCATCT...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CCA 90 bp | AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTTTTTCCTGCTTCCAGTaGTCGAGGCTGAATCATCAG | + |
Preference number: 4 (lower is better) Translates to: NLNLNFQLSTHCWAPKGSFSCFQ*SRLNHQ Trigger: CTGATGATTCAGCCTCGACCACTGGAAGCAGGAAAA...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CAA 72 bp | AACTCAAGTGGTAACCCTGACCCTAGTCTAGCCTCTTaGCACGTTGGAATTACAGATATAAACTACCACTCA | + |
Preference number: 4 (lower is better) Translates to: NSSGNPDPSLAS*HVGITDINYHS Trigger: TGAGTGGTAGTTTATATCTGTAATTCCAACGTGCAAAGAGGCTAGACTAGGGTCAGGGTTACCACTTGAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CAA 72 bp | GCGTCATCTCTCACTTCTTTTGCAATAAGACTGCCTTaGAGGAGTTTGCCTGGAAATCTACAGATACGTTCA | + |
Preference number: 4 (lower is better) Translates to: ASSLTSFAIRLP*RSLPGNLQIRS Trigger: TGAACGTATCTGTAGATTTCCAGGCAAACTCCTCAAAGGCAGTCTTATTGCAAAAGAAGTGAGAGATGACGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CCA 90 bp | AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGATTCATCATTGTCGGTaGACTCGTTGCAGTCTTTCT | + |
Preference number: 4 (lower is better) Translates to: KNLNALAQTFTTVEVEAEIHHCR*TRCSLS Trigger: AGAAAGACTGCAACGAGTCCACCGACAATGATGAAT...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CCA 90 bp | AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTTCAGTTTCAAAACGCTaGCCACAATTAGGACATCGG | + |
Preference number: 4 (lower is better) Translates to: NLNLNFQLSTHCWAPKGSSVSKR*PQLGHR Trigger: CCGATGTCCTAATTGTGGCCAGCGTTTTGAAACTGA...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CCA 90 bp | TGCCTCCCAATTACTGGGATTACAGCTGCGTGTCACTACACGTTTCATTTCCTAATCATATGCCGTACATaGTCATGTTTTCGGAAGTTT | + |
Preference number: 4 (lower is better) Translates to: CLPITGITAACHYTFHFLIICRT*SCFRKF Trigger: AAACTTCCGAAAACATGACCATGTACGGCATATGAT...TAGGAAATGAAACGTGTAGTGACACGCAGCTGTAATCCCAGTAATTGGGAGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CAA 72 bp | CATGTGCATCTGTCTCCTCTCTCCTTACACTACTCTTaGATGTCTGGCTTTGTTAAAGAAGTTATCAGGTTC | + |
Preference number: 4 (lower is better) Translates to: HVHLSPLSLHYS*MSGFVKEVIRF Trigger: GAACCTGATAACTTCTTTAACAAAGCCAGACATCAAAGAGTAGTGTAAGGAGAGAGGAGACAGATGCACATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CAA 72 bp | GGTAGAGAACTTTCCAATTTTATCATTGGAAAGCACTaGGGAGAGAGGATGGTGAACACATTTGAGGAACTG | + |
Preference number: 4 (lower is better) Translates to: GRELSNFIIGKH*GERMVNTFEEL Trigger: CAGTTCCTCAAATGTGTTCACCATCCTCTCTCCCAAGTGCTTTCCAATGATAAAATTGGAAAGTTCTCTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR TCA 90 bp | AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGGGTAATGATTGTCTCTaGAATCATCCAGCATTTCAA | + |
Preference number: 4 (lower is better) Translates to: KNLNALAQTFTTVEVEAEGNDCL*NHPAFQ Trigger: TTGAAATGCTGGATGATTTCAGAGACAATCATTACC...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CCA 90 bp | AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGTATTTTCAATGTGCTTaGCCAAGTAATGAGACGACA | + |
Preference number: 4 (lower is better) Translates to: KNLNALAQTFTTVEVEAEYFQCA*PSNETT Trigger: TGTCGTCTCATTACTTGGCCAAGCACATTGAAAATA...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CAA 72 bp | AGTTATTCTGCTATCTTGCTCTTTTCTCGGGGAGATTaGCTCAGGAAATCTGACTTCTTCAGCTCATTAGTT | + |
Preference number: 4 (lower is better) Translates to: SYSAILLFSRGD*LRKSDFFSSLV Trigger: AACTAATGAGCTGAAGAAGTCAGATTTCCTGAGCAAATCTCCCCGAGAAAAGAGCAAGATAGCAGAATAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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3UTR CAA 72 bp | TCAGTTATAATGGCCTTCTGCCCTCCAGTGTGGGCTTaGATACAAAGAATATTATTACTAATTTGCCTCAGT | + |
Preference number: 4 (lower is better) Translates to: SVIMAFCPPVWA*IQRILLLICLS Trigger: ACTGAGGCAAATTAGTAATAATATTCTTTGTATCAAAGCCCACACTGGAGGGCAGAAGGCCATTATAACTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS GCA 90 bp | TGCTTTTCTCCTCACCAGCTATCCCAGCCTCCACGGTGCTTTTCCTaGTTCCAGTGGTCGAGGCTGAATCATCAGGCGCCTGGTTGGCGT | + |
Preference number: 5 (lower is better) Translates to: CFSPHQLSQPPRCFS*FQWSRLNHQAPGWR Trigger: ACGCCAACCAGGCGCCTGATGATTCAGCCTCGACCACTGGAAGCAGGAAAAGCACCGTGGAGGCTGGGATAGCTGGTGAGGAGAAAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS TCA 90 bp | TCGGGGAAGTTGGCCAACTGCAAAGACTCTTCCTCAGGTTCTCTGTaGTGCGGCGTATTCACCGTTGAACTGGGCTCCGCACACCACCTG | + |
Preference number: 5 (lower is better) Translates to: SGKLANCKDSSSGSL*CGVFTVELGSAHHL Trigger: CAGGTGGTGTGCGGAGCCCAGTTCAACGGTGAATACGCCGCATCACAGAGAACCTGAGGAAGAGTCTTTGCAGTTGGCCAACTTCCCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CAA 90 bp | GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCATCCATGATGGCACCCTaGAACATATCTTGGTCTAGG | + |
Preference number: 5 (lower is better) Translates to: VVELSWTLPGRKVRGSHASMMAP*NISWSR Trigger: CCTAGACCAAGATATGTTCAAGGGTGCCATCATGGA...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CAA 90 bp | GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCAGCACTTATCTTCATGTaGCTGAGGTTCAGTTGTGCA | + |
Preference number: 5 (lower is better) Translates to: VVELSWTLPGRKVRGSHAALIFM*LRFSCA Trigger: TGCACAACTGAACCTCAGCAACATGAAGATAAGTGC...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CAA 90 bp | GTGGTGGAACTTTCCTGGACCCTCCCAGGAAGGAAGGTGAGAGGGAGCCATGCATTCGGTGGTAAGCTCTaGTCGTGTTTTGGTATGAGT | + |
Preference number: 5 (lower is better) Translates to: VVELSWTLPGRKVRGSHAFGGKL*SCFGMS Trigger: ACTCATACCAAAACACGACAAGAGCTTACCACCGAA...TGCATGGCTCCCTCTCACCTTCCTTCCTGGGAGGGTCCAGGAAAGTTCCACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CAA 90 bp | CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATTCCCTAGCCCATTCATaGTCAGATCCTGGGGTTCTC | + |
Preference number: 5 (lower is better) Translates to: PKDRILQTGSPYLPLLCNSLAHS*SDPGVL Trigger: GAGAACCCCAGGATCTGACAATGAATGGGCTAGGGA...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS TCA 90 bp | CAAAGACTCTTCCTCAGGTTCTCTGTGATGCGGCGTATTCACCGTTaGACTGGGCTCCGCACACCACCTGTTGGCTTCATTGCCATTTCT | + |
Preference number: 5 (lower is better) Translates to: QRLFLRFSVMRRIHR*TGLRTPPVGFIAIS Trigger: AGAAATGGCAATGAAGCCAACAGGTGGTGTGCGGAGCCCAGTTCAACGGTGAATACGCCGCATCACAGAGAACCTGAGGAAGAGTCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS GCA 90 bp | CGACAGGTCCTCCTCAGTTATTGTGAGTCCACACAGCTCACAAGATaGATTCTCTGCATCCTCTTGTATGGGGCTGGTGTTATTCGGGGG | + |
Preference number: 5 (lower is better) Translates to: RQVLLSYCESTQLTR*ILCILLYGAGVIRG Trigger: CCCCCGAATAACACCAGCCCCATACAAGAGGATGCAGAGAATGCATCTTGTGAGCTGTGTGGACTCACAATAACTGAGGAGGACCTGTCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CCA 90 bp | GTGCTTTTCCTGCTTCCAGTGGTCGAGGCTGAATCATCAGGCGCCTaGTTGGCGTCTTCTCTGTATTTGTCCGGCTGTGCAGAAAATGTT | + |
Preference number: 5 (lower is better) Translates to: VLFLLPVVEAESSGA*LASSLYLSGCAENV Trigger: AACATTTTCTGCACAGCCGGACAAATACAGAGAAGACGCCAACCAGGCGCCTGATGATTCAGCCTCGACCACTGGAAGCAGGAAAAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CAA 90 bp | CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATGACGGCTTTGTGTGCTaGGAAGTAGATGTCGTCGAT | + |
Preference number: 5 (lower is better) Translates to: PKDRILQTGSPYLPLLCNDGFVC*EVDVVD Trigger: ATCGACGACATCTACTTCCAAGCACACAAAGCCGTC...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CAA 90 bp | GCAGAGGTCAATCAGCATGATCTTGGATTGGGAGTCACGAGCCAAGGGAAAAAGAAAGCCCCACTCTCTTaGGTTGTTGAGCTGCTGCAG | + |
Preference number: 5 (lower is better) Translates to: AEVNQHDLGLGVTSQGKKKAPLS*VVELLQ Trigger: CTGCAGCAGCTCAACAACCAAAGAGAGTGGGGCTTT...CTTTTTCCCTTGGCTCGTGACTCCCAATCCAAGATCATGCTGATTGACCTCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CAA 90 bp | AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCTCCGCACACCACCTGTaGGCTTCATTGCCATTTCTA | + |
Preference number: 5 (lower is better) Translates to: NSDLSLLQRLRRPYCTTASAHHL*ASLPFL Trigger: TAGAAATGGCAATGAAGCCAACAGGTGGTGTGCGGA...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CCA 90 bp | CACACAGCTCACAAGATGCATTCTCTGCATCCTCTTGTATGGGGCTaGTGTTATTCGGGGGTCTCATGTTCTCTAAGCCACCTCTCTCAT | + |
Preference number: 5 (lower is better) Translates to: HTAHKMHSLHPLVWG*CYSGVSCSLSHLSH Trigger: ATGAGAGAGGTGGCTTAGAGAACATGAGACCCCCGAATAACACCAGCCCCATACAAGAGGATGCAGAGAATGCATCTTGTGAGCTGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CAA 90 bp | CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATTACCTGGCCATGCCTTaGTGCATATCATTGTGTAGA | + |
Preference number: 5 (lower is better) Translates to: PKDRILQTGSPYLPLLCNYLAMP*CISLCR Trigger: TCTACACAATGATATGCACAAAGGCATGGCCAGGTA...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS GCA 90 bp | CTCCTCAGTTATTGTGAGTCCACACAGCTCACAAGATGCATTCTCTaGATCCTCTTGTATGGGGCTGGTGTTATTCGGGGGTCTCATGTT | + |
Preference number: 5 (lower is better) Translates to: LLSYCESTQLTRCIL*ILLYGAGVIRGSHV Trigger: AACATGAGACCCCCGAATAACACCAGCCCCATACAAGAGGATGCAGAGAATGCATCTTGTGAGCTGTGTGGACTCACAATAACTGAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CAA 90 bp | CCACATGGTGGCTCACAACCATTCATAATGGAATCTGACTCCCTCTTCTGGAGTCCTTTGTGCATATCATaGTGTAGACGCAACTGGCGC | + |
Preference number: 5 (lower is better) Translates to: PHGGSQPFIMESDSLFWSPLCIS*CRRNWR Trigger: GCGCCAGTTGCGTCTACACAATGATATGCACAAAGG...ACTCCAGAAGAGGGAGTCAGATTCCATTATGAATGGTTGTGAGCCACCATGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS GCA 90 bp | GTCTTCCAAGCAGTCAGGAACATTGTACAGCTGGAGGTAGTTCATTaGCACTTTGAACTGCTCGAAACTGGAAGGAGCGGTCATGATCTT | + |
Preference number: 5 (lower is better) Translates to: VFQAVRNIVQLEVVH*HFELLETGRSGHDL Trigger: AAGATCATGACCGCTCCTTCCAGTTTCGAGCAGTTCAAAGTGGCAATGAACTACCTCCAGCTGTACAATGTTCCTGACTGCTTGGAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CAA 90 bp | AATCTGAACCTAAACTTTCAACTTTCAACTCATTGTTGGGCCCCCAAAGGAAGTAGCGGCTCGGGGAAGTaGGCCAACTGCAAAGACTCT | + |
Preference number: 5 (lower is better) Translates to: NLNLNFQLSTHCWAPKGSSGSGK*ANCKDS Trigger: AGAGTCTTTGCAGTTGGCCAACTTCCCCGAGCCGCT...ACTTCCTTTGGGGGCCCAACAATGAGTTGAAAGTTGAAAGTTTAGGTTCAGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS GCA 90 bp | ACCGTGTCTTCATACATTCTCACCCCAAAAATCATCTTGCTGCTCTaGCTGCTGGAGGCAGAAGACGAACACTTTGAACTAGAACAGTCT | + |
Preference number: 5 (lower is better) Translates to: TVSSYILTPKIILLL*LLEAEDEHFELEQS Trigger: AGACTGTTCTAGTTCAAAGTGTTCGTCTTCTGCCTCCAGCAGGCAGAGCAGCAAGATGATTTTTGGGGTGAGAATGTATGAAGACACGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CAA 90 bp | AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCTCTTCTGGCTCCATCTaGATGATAATTCGTTTTGTC | + |
Preference number: 5 (lower is better) Translates to: NSDLSLLQRLRRPYCTTASSGSI*MIIRFV Trigger: GACAAAACGAATTATCATCAAGATGGAGCCAGAAGA...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CAA 90 bp | AATTCAGATCTGTCACTTCTCCAGAGGCTTAGAAGGCCCTACTGCACCACTGCCTTTTCGGAAGTTTCCTaGATCACAAATGGAACAGAC | + |
Preference number: 5 (lower is better) Translates to: NSDLSLLQRLRRPYCTTAFSEVS*ITNGTD Trigger: GTCTGTTCCATTTGTGATCAAGGAAACTTCCGAAAA...GGCAGTGGTGCAGTAGGGCCTTCTAAGCCTCTGGAGAAGTGACAGATCTGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CAA 90 bp | CCCAAGGACAGGATTCTACAAACAGGCTCCCCCTACCTGCCACTACTCTGCAATCATATGCTGCTCCAGTaGTTCATTATTTGGGAATAT | + |
Preference number: 5 (lower is better) Translates to: PKDRILQTGSPYLPLLCNHMLLQ*FIIWEY Trigger: ATATTCCCAAATAATGAACAACTGGAGCAGCATATG...ATTGCAGAGTAGTGGCAGGTAGGGGGAGCCTGTTTGTAGAATCCTGTCCTTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS GCA 90 bp | CTGAAATCATCCAGCATTTCAACAAACATGTCTCTTATCTCAGACTaGTCGTCGGGGTTCTCTTCCATGTCCATTTTCTCGTCAGCGTTC | + |
Preference number: 5 (lower is better) Translates to: LKSSSISTNMSLISD*SSGFSSMSIFSSAF Trigger: GAACGCTGACGAGAAAATGGACATGGAAGAGAACCCCGACGAGCAGTCTGAGATAAGAGACATGTTTGTTGAAATGCTGGATGATTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CCA 90 bp | CATGTTTTCGGAAGTTTCCTTGATCACAAATGGAACAGACATACCTaGCCATGCCTTTGTGCATATCATTGTGTAGACGCAACTGGCGCT | + |
Preference number: 5 (lower is better) Translates to: HVFGSFLDHKWNRHT*PCLCAYHCVDATGA Trigger: AGCGCCAGTTGCGTCTACACAATGATATGCACAAAGGCATGGCCAGGTATGTCTGTTCCATTTGTGATCAAGGAAACTTCCGAAAACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CAA 90 bp | AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGGTTGCTGAGGTTCAGTaGTGCAGTACTGTGCTGATG | + |
Preference number: 5 (lower is better) Translates to: KNLNALAQTFTTVEVEAEVAEVQ*CSTVLM Trigger: CATCAGCACAGTACTGCACAACTGAACCTCAGCAAC...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS TCA 90 bp | TGCGAGATCATATGCCGTACATGGTCATGTTTTCGGAAGTTTCCTTaGTCACAAATGGAACAGACATACCTGGCCATGCCTTTGTGCATA | + |
Preference number: 5 (lower is better) Translates to: CEIICRTWSCFRKFP*SQMEQTYLAMPLCI Trigger: TATGCACAAAGGCATGGCCAGGTATGTCTGTTCCATTTGTGATCAAGGAAACTTCCGAAAACATGACCATGTACGGCATATGATCTCGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CAA 90 bp | AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGGCGTCTTCTCTGTATTaGTCCGGCTGTGCAGAAAAT | + |
Preference number: 5 (lower is better) Translates to: KNLNALAQTFTTVEVEAEASSLY*SGCAEN Trigger: ATTTTCTGCACAGCCGGACAAATACAGAGAAGACGC...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CAA 90 bp | CCACATGGTGGCTCACAACCATTCATAATGGAATCTGACTCCCTCTTCTGGAGTTCAGCAAGTTCAGCTTaGATGTTACTATCTTTTCCA | + |
Preference number: 5 (lower is better) Translates to: PHGGSQPFIMESDSLFWSSASSA*MLLSFP Trigger: TGGAAAAGATAGTAACATCAAAGCTGAACTTGCTGA...ACTCCAGAAGAGGGAGTCAGATTCCATTATGAATGGTTGTGAGCCACCATGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CAA 90 bp | AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGTCTTCTAATTCATCATaGTCGGTGGACTCGTTGCAG | + |
Preference number: 5 (lower is better) Translates to: KNLNALAQTFTTVEVEAESSNSS*SVDSLQ Trigger: CTGCAACGAGTCCACCGACAATGATGAATTAGAAGA...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS-3UTR CAA 90 bp | AAGAACCTGAATGCTTTAGCTCAAACCTTTACAACTGTGGAAGTTGAGGCAGAGATTCTCTGCATCCTCTaGTATGGGGCTGGTGTTATT | + |
Preference number: 5 (lower is better) Translates to: KNLNALAQTFTTVEVEAEILCIL*YGAGVI Trigger: AATAACACCAGCCCCATACAAGAGGATGCAGAGAAT...CTCTGCCTCAACTTCCACAGTTGTAAAGGTTTGAGCTAAAGCATTCAGGTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CCA 90 bp | TATGCCGTACATGGTCATGTTTTCGGAAGTTTCCTTGATCACAAATaGAACAGACATACCTGGCCATGCCTTTGTGCATATCATTGTGTA | + |
Preference number: 5 (lower is better) Translates to: YAVHGHVFGSFLDHK*NRHTWPCLCAYHCV Trigger: TACACAATGATATGCACAAAGGCATGGCCAGGTATGTCTGTTCCATTTGTGATCAAGGAAACTTCCGAAAACATGACCATGTACGGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS GCA 90 bp | TCGAAACTGGAAGGAGCGGTCATGATCTTTCCTAAATACATGAACTaGAAAATGAGATCAAAGCACTCAGCACTTATCTTCATGTTGCTG | + |
Preference number: 5 (lower is better) Translates to: SKLEGAVMIFPKYMN*KMRSKHSALIFMLL Trigger: CAGCAACATGAAGATAAGTGCTGAGTGCTTTGATCTCATTTTGCAGTTCATGTATTTAGGAAAGATCATGACCGCTCCTTCCAGTTTCGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS GCA 90 bp | CTTGGCATTATAATGCGATCTCATATCCTTCCTCAAATTAAACTTTaGTCCACATATTCCACACGTGTACAGATGGACATCCATATGCTG | + |
Preference number: 5 (lower is better) Translates to: LGIIMRSHILPQIKL*STYSTRVQMDIHML Trigger: CAGCATATGGATGTCCATCTGTACACGTGTGGAATATGTGGAGCAAAGTTTAATTTGAGGAAGGATATGAGATCGCATTATAATGCCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CCA 90 bp | CAGCTAGACATATGTTCGACCACTAAATTTTCAGTTTCAAAACGCTaGCCACAATTAGGACATCGGAAAGGACAGGCAGAATGTTTAAAT | + |
Preference number: 5 (lower is better) Translates to: QLDICSTTKFSVSKR*PQLGHRKGQAECLN Trigger: ATTTAAACATTCTGCCTGTCCTTTCCGATGTCCTAATTGTGGCCAGCGTTTTGAAACTGAAAATTTAGTGGTCGAACATATGTCTAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CCA 90 bp | TTCCTCAAATTAAACTTTGCTCCACATATTCCACACGTGTACAGATaGACATCCATATGCTGCTCCAGTTGTTCATTATTTGGGAATATC | + |
Preference number: 5 (lower is better) Translates to: FLKLNFAPHIPHVYR*TSICCSSCSLFGNI Trigger: GATATTCCCAAATAATGAACAACTGGAGCAGCATATGGATGTCCATCTGTACACGTGTGGAATATGTGGAGCAAAGTTTAATTTGAGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS GCA 90 bp | GTCTTTCTCAGTAACTTTAATAATGTTGAAGTCTTTCATGTCATCTaGAGGGATATCTTCTGGCTCCATCTTGATGATAATTCGTTTTGT | + |
Preference number: 5 (lower is better) Translates to: VFLSNFNNVEVFHVI*RDIFWLHLDDNSFC Trigger: ACAAAACGAATTATCATCAAGATGGAGCCAGAAGATATCCCTGCAGATGACATGAAAGACTTCAACATTATTAAAGTTACTGAGAAAGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS GCA 72 bp | CCTCACCAGCTATCCCAGCCTCCACGGTGCTTTTCCTaGTTCCAGTGGTCGAGGCTGAATCATCAGGCGCCT | + |
Preference number: 6 (lower is better) Translates to: PHQLSQPPRCFS*FQWSRLNHQAP Trigger: AGGCGCCTGATGATTCAGCCTCGACCACTGGAAGCAGGAAAAGCACCGTGGAGGCTGGGATAGCTGGTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS TCA 72 bp | CTCCACGGTGCTTTTCCTGCTTCCAGTGGTCGAGGCTaGATCATCAGGCGCCTGGTTGGCGTCTTCTCTGTA | + |
Preference number: 6 (lower is better) Translates to: LHGAFPASSGRG*IIRRLVGVFSV Trigger: TACAGAGAAGACGCCAACCAGGCGCCTGATGATTCAGCCTCGACCACTGGAAGCAGGAAAAGCACCGTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CCA 72 bp | CTGCTTCCAGTGGTCGAGGCTGAATCATCAGGCGCCTaGTTGGCGTCTTCTCTGTATTTGTCCGGCTGTGCA | + |
Preference number: 6 (lower is better) Translates to: LLPVVEAESSGA*LASSLYLSGCA Trigger: TGCACAGCCGGACAAATACAGAGAAGACGCCAACCAGGCGCCTGATGATTCAGCCTCGACCACTGGAAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CCA 72 bp | CAGGTTCTCTGTGATGCGGCGTATTCACCGTTGAACTaGGCTCCGCACACCACCTGTTGGCTTCATTGCCAT | + |
Preference number: 6 (lower is better) Translates to: QVLCDAAYSPLN*APHTTCWLHCH Trigger: ATGGCAATGAAGCCAACAGGTGGTGTGCGGAGCCCAGTTCAACGGTGAATACGCCGCATCACAGAGAACCTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CAA 72 bp | CTTCCTCAGGTTCTCTGTGATGCGGCGTATTCACCGTaGAACTGGGCTCCGCACACCACCTGTTGGCTTCAT | + |
Preference number: 6 (lower is better) Translates to: LPQVLCDAAYSP*NWAPHTTCWLH Trigger: ATGAAGCCAACAGGTGGTGTGCGGAGCCCAGTTCAACGGTGAATACGCCGCATCACAGAGAACCTGAGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CAA 72 bp | CTTCCAGTGGTCGAGGCTGAATCATCAGGCGCCTGGTaGGCGTCTTCTCTGTATTTGTCCGGCTGTGCAGAA | + |
Preference number: 6 (lower is better) Translates to: LPVVEAESSGAW*ASSLYLSGCAE Trigger: TTCTGCACAGCCGGACAAATACAGAGAAGACGCCAACCAGGCGCCTGATGATTCAGCCTCGACCACTGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS TCA 72 bp | TTCCTCAGGTTCTCTGTGATGCGGCGTATTCACCGTTaGACTGGGCTCCGCACACCACCTGTTGGCTTCATT | + |
Preference number: 6 (lower is better) Translates to: FLRFSVMRRIHR*TGLRTPPVGFI Trigger: AATGAAGCCAACAGGTGGTGTGCGGAGCCCAGTTCAACGGTGAATACGCCGCATCACAGAGAACCTGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS GCA 72 bp | TGCTTTTCTCCTCACCAGCTATCCCAGCCTCCACGGTaGTTTTCCTGCTTCCAGTGGTCGAGGCTGAATCAT | + |
Preference number: 6 (lower is better) Translates to: CFSPHQLSQPPR*FSCFQWSRLNH Trigger: ATGATTCAGCCTCGACCACTGGAAGCAGGAAAAGCACCGTGGAGGCTGGGATAGCTGGTGAGGAGAAAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CCA 72 bp | TTCCAGTGGTCGAGGCTGAATCATCAGGCGCCTGGTTaGCGTCTTCTCTGTATTTGTCCGGCTGTGCAGAAA | + |
Preference number: 6 (lower is better) Translates to: FQWSRLNHQAPG*RLLCICPAVQK Trigger: TTTCTGCACAGCCGGACAAATACAGAGAAGACGCCAACCAGGCGCCTGATGATTCAGCCTCGACCACTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CAA 90 bp | GCAAAGACTCTTCCTCAGGTTCTCTGTGATGCGGCGTATTCACCGTaGAACTGGGCTCCGCACACCACCTGTTGGCTTCATTGCCATTTC | + |
Preference number: 6 (lower is better) Translates to: AKTLPQVLCDAAYSP*NWAPHTTCWLHCHF Trigger: GAAATGGCAATGAAGCCAACAGGTGGTGTGCGGAGCCCAGTTCAACGGTGAATACGCCGCATCACAGAGAACCTGAGGAAGAGTCTTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CAA 72 bp | GTATTCACCGTTGAACTGGGCTCCGCACACCACCTGTaGGCTTCATTGCCATTTCTAGCCACCGTGTCTTCA | + |
Preference number: 6 (lower is better) Translates to: VFTVELGSAHHL*ASLPFLATVSS Trigger: TGAAGACACGGTGGCTAGAAATGGCAATGAAGCCAACAGGTGGTGTGCGGAGCCCAGTTCAACGGTGAATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CAA 72 bp | TGTCCATTTTCTCGTCAGCGTTCCCTAGCCCATTCATaGTCAGATCCTGGGGTTCTCCGCACCTCTGAGCAT | + |
Preference number: 6 (lower is better) Translates to: CPFSRQRSLAHS*SDPGVLRTSEH Trigger: ATGCTCAGAGGTGCGGAGAACCCCAGGATCTGACAATGAATGGGCTAGGGAACGCTGACGAGAAAATGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CAA 90 bp | TCTCTTCCATGTCCATTTTCTCGTCAGCGTTCCCTAGCCCATTCATaGTCAGATCCTGGGGTTCTCCGCACCTCTGAGCATGTTCCTGAA | + |
Preference number: 6 (lower is better) Translates to: SLPCPFSRQRSLAHS*SDPGVLRTSEHVPE Trigger: TTCAGGAACATGCTCAGAGGTGCGGAGAACCCCAGGATCTGACAATGAATGGGCTAGGGAACGCTGACGAGAAAATGGACATGGAAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS TCA 72 bp | CGCACCTCTGAGCATGTTCCTGAAGCTGTCTGCCCTTaGCAAGTATCTGTCCACATTTACCACATGCACAGA | + |
Preference number: 6 (lower is better) Translates to: RTSEHVPEAVCP*QVSVHIYHMHR Trigger: TCTGTGCATGTGGTAAATGTGGACAGATACTTGTCAAGGGCAGACAGCTTCAGGAACATGCTCAGAGGTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS GCA 72 bp | GCAGTCAGGAACATTGTACAGCTGGAGGTAGTTCATTaGCACTTTGAACTGCTCGAAACTGGAAGGAGCGGT | + |
Preference number: 6 (lower is better) Translates to: AVRNIVQLEVVH*HFELLETGRSG Trigger: ACCGCTCCTTCCAGTTTCGAGCAGTTCAAAGTGGCAATGAACTACCTCCAGCTGTACAATGTTCCTGACTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS GCA 72 bp | CCGTGTCTTCATACATTCTCACCCCAAAAATCATCTTaGTGCTCTGCCTGCTGGAGGCAGAAGACGAACACT | + |
Preference number: 6 (lower is better) Translates to: PCLHTFSPQKSS*CSACWRQKTNT Trigger: AGTGTTCGTCTTCTGCCTCCAGCAGGCAGAGCAGCAAGATGATTTTTGGGGTGAGAATGTATGAAGACACGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CCA 72 bp | CACAAGATGCATTCTCTGCATCCTCTTGTATGGGGCTaGTGTTATTCGGGGGTCTCATGTTCTCTAAGCCAC | + |
Preference number: 6 (lower is better) Translates to: HKMHSLHPLVWG*CYSGVSCSLSH Trigger: GTGGCTTAGAGAACATGAGACCCCCGAATAACACCAGCCCCATACAAGAGGATGCAGAGAATGCATCTTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CAA 72 bp | TCCACACAGCTCACAAGATGCATTCTCTGCATCCTCTaGTATGGGGCTGGTGTTATTCGGGGGTCTCATGTT | + |
Preference number: 6 (lower is better) Translates to: STQLTRCILCIL*YGAGVIRGSHV Trigger: AACATGAGACCCCCGAATAACACCAGCCCCATACAAGAGGATGCAGAGAATGCATCTTGTGAGCTGTGTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CCA 72 bp | ACAGCTCACAAGATGCATTCTCTGCATCCTCTTGTATaGGGCTGGTGTTATTCGGGGGTCTCATGTTCTCTA | + |
Preference number: 6 (lower is better) Translates to: TAHKMHSLHPLV*GWCYSGVSCSL Trigger: TAGAGAACATGAGACCCCCGAATAACACCAGCCCCATACAAGAGGATGCAGAGAATGCATCTTGTGAGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CAA 90 bp | TTTCTAGCCACCGTGTCTTCATACATTCTCACCCCAAAAATCATCTaGCTGCTCTGCCTGCTGGAGGCAGAAGACGAACACTTTGAACTA | + |
Preference number: 6 (lower is better) Translates to: FLATVSSYILTPKII*LLCLLEAEDEHFEL Trigger: TAGTTCAAAGTGTTCGTCTTCTGCCTCCAGCAGGCAGAGCAGCAAGATGATTTTTGGGGTGAGAATGTATGAAGACACGGTGGCTAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS GCA 72 bp | TGTCTTCATACATTCTCACCCCAAAAATCATCTTGCTaGTCTGCCTGCTGGAGGCAGAAGACGAACACTTTG | + |
Preference number: 6 (lower is better) Translates to: CLHTFSPQKSSC*SACWRQKTNTL Trigger: CAAAGTGTTCGTCTTCTGCCTCCAGCAGGCAGAGCAGCAAGATGATTTTTGGGGTGAGAATGTATGAAGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CAA 72 bp | GAATCATCAGGCGCCTGGTTGGCGTCTTCTCTGTATTaGTCCGGCTGTGCAGAAAATGTTTTAGAAGAATCC | + |
Preference number: 6 (lower is better) Translates to: ESSGAWLASSLY*SGCAENVLEES Trigger: GGATTCTTCTAAAACATTTTCTGCACAGCCGGACAAATACAGAGAAGACGCCAACCAGGCGCCTGATGATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CAA 72 bp | GAACAGACATACCTGGCCATGCCTTTGTGCATATCATaGTGTAGACGCAACTGGCGCTCTCTTAAAAACTGC | + |
Preference number: 6 (lower is better) Translates to: EQTYLAMPLCIS*CRRNWRSLKNC Trigger: GCAGTTTTTAAGAGAGCGCCAGTTGCGTCTACACAATGATATGCACAAAGGCATGGCCAGGTATGTCTGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CAA 90 bp | GTGCGAGATCATATGCCGTACATGGTCATGTTTTCGGAAGTTTCCTaGATCACAAATGGAACAGACATACCTGGCCATGCCTTTGTGCAT | + |
Preference number: 6 (lower is better) Translates to: VRDHMPYMVMFSEVS*ITNGTDIPGHAFVH Trigger: ATGCACAAAGGCATGGCCAGGTATGTCTGTTCCATTTGTGATCAAGGAAACTTCCGAAAACATGACCATGTACGGCATATGATCTCGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS TCA 72 bp | TACTATTCGGTGGTAAGCTCTTGTCGTGTTTTGGTATaGGTGTCTGTTGGTACAGGTCAGCACATGTTCGTC | + |
Preference number: 6 (lower is better) Translates to: YYSVVSSCRVLV*VSVGTGQHMFV Trigger: GACGAACATGTGCTGACCTGTACCAACAGACACTCATACCAAAACACGACAAGAGCTTACCACCGAATAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS GCA 72 bp | TCCAGCATTTCAACAAACATGTCTCTTATCTCAGACTaGTCGTCGGGGTTCTCTTCCATGTCCATTTTCTCG | + |
Preference number: 6 (lower is better) Translates to: SSISTNMSLISD*SSGFSSMSIFS Trigger: CGAGAAAATGGACATGGAAGAGAACCCCGACGAGCAGTCTGAGATAAGAGACATGTTTGTTGAAATGCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CAA 90 bp | TCACAAATGGAACAGACATACCTGGCCATGCCTTTGTGCATATCATaGTGTAGACGCAACTGGCGCTCTCTTAAAAACTGCTTTCCACAT | + |
Preference number: 6 (lower is better) Translates to: SQMEQTYLAMPLCIS*CRRNWRSLKNCFPH Trigger: ATGTGGAAAGCAGTTTTTAAGAGAGCGCCAGTTGCGTCTACACAATGATATGCACAAAGGCATGGCCAGGTATGTCTGTTCCATTTGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CCA 72 bp | GGAAGTTTCCTTGATCACAAATGGAACAGACATACCTaGCCATGCCTTTGTGCATATCATTGTGTAGACGCA | + |
Preference number: 6 (lower is better) Translates to: GSFLDHKWNRHT*PCLCAYHCVDA Trigger: TGCGTCTACACAATGATATGCACAAAGGCATGGCCAGGTATGTCTGTTCCATTTGTGATCAAGGAAACTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CCA 72 bp | GGTAAGCTCTTGTCGTGTTTTGGTATGAGTGTCTGTTaGTACAGGTCAGCACATGTTCGTCTAGTAACTTTT | + |
Preference number: 6 (lower is better) Translates to: GKLLSCFGMSVC*YRSAHVRLVTF Trigger: AAAAGTTACTAGACGAACATGTGCTGACCTGTACCAACAGACACTCATACCAAAACACGACAAGAGCTTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CCA 72 bp | CACATTTACCACATGCACAGATATTTTCAATGTGCTTaGCCAAGTAATGAGACGACAGGTCCTCCTCAGTTA | + |
Preference number: 6 (lower is better) Translates to: HIYHMHRYFQCA*PSNETTGPPQL Trigger: TAACTGAGGAGGACCTGTCGTCTCATTACTTGGCCAAGCACATTGAAAATATCTGTGCATGTGGTAAATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CCA 72 bp | ATATGTTCGACCACTAAATTTTCAGTTTCAAAACGCTaGCCACAATTAGGACATCGGAAAGGACAGGCAGAA | + |
Preference number: 6 (lower is better) Translates to: ICSTTKFSVSKR*PQLGHRKGQAE Trigger: TTCTGCCTGTCCTTTCCGATGTCCTAATTGTGGCCAGCGTTTTGAAACTGAAAATTTAGTGGTCGAACATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CAA 90 bp | GAGATCAAAGCACTCAGCACTTATCTTCATGTTGCTGAGGTTCAGTaGTGCAGTACTGTGCTGATGGTTCATGAAAAACATCCTAAAGTA | + |
Preference number: 6 (lower is better) Translates to: EIKALSTYLHVAEVQ*CSTVLMVHEKHPKV Trigger: TACTTTAGGATGTTTTTCATGAACCATCAGCACAGTACTGCACAACTGAACCTCAGCAACATGAAGATAAGTGCTGAGTGCTTTGATCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CAA 90 bp | TTGAAGTCTTTCATGTCATCTGCAGGGATATCTTCTGGCTCCATCTaGATGATAATTCGTTTTGTCTCAGTAGCTCTGCTTTTCTCCTCA | + |
Preference number: 6 (lower is better) Translates to: LKSFMSSAGISSGSI*MIIRFVSVALLFSS Trigger: TGAGGAGAAAAGCAGAGCTACTGAGACAAAACGAATTATCATCAAGATGGAGCCAGAAGATATCCCTGCAGATGACATGAAAGACTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CAA 90 bp | GGCTCCTCGGGTTCATCTTCTAATTCATCATTGTCGGTGGACTCGTaGCAGTCTTTCTCAGTAACTTTAATAATGTTGAAGTCTTTCATG | + |
Preference number: 6 (lower is better) Translates to: GSSGSSSNSSLSVDS*QSFSVTLIMLKSFM Trigger: CATGAAAGACTTCAACATTATTAAAGTTACTGAGAAAGACTGCAACGAGTCCACCGACAATGATGAATTAGAAGATGAACCCGAGGAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CCA 72 bp | GTTGAAGTCTTTCATGTCATCTGCAGGGATATCTTCTaGCTCCATCTTGATGATAATTCGTTTTGTCTCAGT | + |
Preference number: 6 (lower is better) Translates to: VEVFHVICRDIF*LHLDDNSFCLS Trigger: ACTGAGACAAAACGAATTATCATCAAGATGGAGCCAGAAGATATCCCTGCAGATGACATGAAAGACTTCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS GCA 72 bp | ATAATGCGATCTCATATCCTTCCTCAAATTAAACTTTaGTCCACATATTCCACACGTGTACAGATGGACATC | + |
Preference number: 6 (lower is better) Translates to: IMRSHILPQIKL*STYSTRVQMDI Trigger: GATGTCCATCTGTACACGTGTGGAATATGTGGAGCAAAGTTTAATTTGAGGAAGGATATGAGATCGCATTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |
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CDS CCA 72 bp | TTAAACTTTGCTCCACATATTCCACACGTGTACAGATaGACATCCATATGCTGCTCCAGTTGTTCATTATTT | + |
Preference number: 6 (lower is better) Translates to: LNFAPHIPHVYR*TSICCSSCSLF Trigger: AAATAATGAACAACTGGAGCAGCATATGGATGTCCATCTGTACACGTGTGGAATATGTGGAGCAAAGTTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042779.4 |