Pregenerated sensors for ZBP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027514Ensembl transcript IDs: ENSMUST00000029018.14, ENSMUST00000109116.3
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTTTCATTCATTCAACATGGTGGCCTCTGGTCACATCCTCTTCTaGCCAATGACAGCCTCAGTATTTCCCATGGCTGTGTGCATACTC | + |
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Preference number: 1 (lower is better) Translates to: GFHSFNMVASGHILF*PMTASVFPMAVCIL Trigger: GAGTATGCACACAGCCATGGGAAATACTGAGGCTGTCATTGGCCAGAAGAGGATGTGACCAGAGGCCACCATGTTGAATGAATGAAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| 3UTR-3UTR TCA 90 bp | CTTTCATTCATTCAACATGGTGGCCTCTGGTCACATCCTCTTCTGGCCAATGACACTTTTGCCTTTGGGTaGGCATCCAGGAGTGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: LSFIQHGGLWSHPLLANDTFAFG*ASRSGR Trigger: TCTACCACTCCTGGATGCTCACCCAAAGGCAAAAGT...GTCATTGGCCAGAAGAGGATGTGACCAGAGGCCACCATGTTGAATGAATGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| 3UTR-3UTR GCA 90 bp | CTTTCATTCATTCAACATGGTGGCCTCTGGTCACATCCTCTTCTGGCCAATGACCTCTGTGTTGACTTTTaGCTTTGGGTGAGCATCCAG | + |
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Preference number: 2 (lower is better) Translates to: LSFIQHGGLWSHPLLANDLCVDF*LWVSIQ Trigger: CTGGATGCTCACCCAAAGGCAAAAGTCAACACAGAG...GTCATTGGCCAGAAGAGGATGTGACCAGAGGCCACCATGTTGAATGAATGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| 3UTR-3UTR TCA 90 bp | TTTCATTCATTCAACATGGTGGCCTCTGGTCACATCCTCTTCTGGCCAATGACAGAGATCTCTCTGTGTTaGCTTTTGCCTTTGGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: FHSFNMVASGHILFWPMTEISLC*LLPLGE Trigger: CTCACCCAAAGGCAAAAGTCAACACAGAGAGATCTC...TGTCATTGGCCAGAAGAGGATGTGACCAGAGGCCACCATGTTGAATGAATGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| 3UTR-3UTR CCA 90 bp | ATGCACCATCCTCATCCCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGTTCATTCATTCAACATaGTGGCCTCTGGTCACATCC | + |
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Preference number: 2 (lower is better) Translates to: MHHPHPLVGVTCTFMSHLFIHST*WPLVTS Trigger: GGATGTGACCAGAGGCCACCATGTTGAATGAATGAA...CAGATGTGACATGAAAGTACATGTAACACCAACCAGGGGATGAGGATGGTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| 3UTR-3UTR TCA 90 bp | GAGCCACAACAGAGAAAATGTGGCCCTTGTCTTTCTAAGATGGCTTTCATTCATCTGCGGTTGATCGATTaGTTGATCTTGAGGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: EPQQRKCGPCLSKMAFIHLRLID*LILRQE Trigger: TTCCTGCCTCAAGATCAATCAATCGATCAACCGCAG...ATGAATGAAAGCCATCTTAGAAAGACAAGGGCCACATTTTCTCTGTTGTGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| 3UTR-3UTR CCA 90 bp | TCCCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGTGTATATGATTTTAGGTCACATCCTCTTCTaGCCAATGACAGCCTCAGTA | + |
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Preference number: 2 (lower is better) Translates to: SPGWCYMYFHVTSVYMILGHILF*PMTASV Trigger: TACTGAGGCTGTCATTGGCCAGAAGAGGATGTGACC...TAAAATCATATACACAGATGTGACATGAAAGTACATGTAACACCAACCAGGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| 3UTR-3UTR TCA 90 bp | TCCCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGTGTATATGATTTTACAGGAAAGGTTGATTTaGCTTATAGTGGCAGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: SPGWCYMYFHVTSVYMILQERLI*LIVAEG Trigger: CCCCTCTGCCACTATAAGTCAAATCAACCTTTCCTG...TAAAATCATATACACAGATGTGACATGAAAGTACATGTAACACCAACCAGGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| 3UTR-3UTR CCA 90 bp | TCCCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGTGTATATGATTTTACCTCAGTATTTCCCATaGCTGTGTGCATACTCCAAT | + |
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Preference number: 2 (lower is better) Translates to: SPGWCYMYFHVTSVYMILPQYFP*LCAYSN Trigger: ATTGGAGTATGCACACAGCCATGGGAAATACTGAGG...TAAAATCATATACACAGATGTGACATGAAAGTACATGTAACACCAACCAGGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| 3UTR-3UTR GCA 90 bp | TCCCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGTGTATATGATTTTACAATCTACATGGATATaGGGAGATCTCTCTGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: SPGWCYMYFHVTSVYMILQSTWI*GDLSVL Trigger: CAACACAGAGAGATCTCCGCATATCCATGTAGATTG...TAAAATCATATACACAGATGTGACATGAAAGTACATGTAACACCAACCAGGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| 3UTR-3UTR CCA 90 bp | CCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGTGTATATGATTTTATAATTCATTCAACATGGTaGCCTCTGGTCACATCCTCT | + |
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Preference number: 2 (lower is better) Translates to: PWLVLHVLSCHICVYDFIIHSTW*PLVTSS Trigger: AGAGGATGTGACCAGAGGCCACCATGTTGAATGAAT...TATAAAATCATATACACAGATGTGACATGAAAGTACATGTAACACCAACCAGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| 3UTR TCA 72 bp | TGCGGAGATCTCTCTGTGTTGACTTTTGCCTTTGGGTaGGCATCCAGGAGTGGTAGAACTGGCTCCTGCGGT | + |
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Preference number: 3 (lower is better) Translates to: CGDLSVLTFAFG*ASRSGRTGSCG Trigger: ACCGCAGGAGCCAGTTCTACCACTCCTGGATGCTCACCCAAAGGCAAAAGTCAACACAGAGAGATCTCCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| 3UTR TCA 72 bp | CCCAATCTACATGGATATGCGGAGATCTCTCTGTGTTaGCTTTTGCCTTTGGGTGAGCATCCAGGAGTGGTA | + |
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Preference number: 3 (lower is better) Translates to: PNLHGYAEISLC*LLPLGEHPGVV Trigger: TACCACTCCTGGATGCTCACCCAAAGGCAAAAGTCAACACAGAGAGATCTCCGCATATCCATGTAGATTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR CCA 90 bp | GGTGGCCTCTGGTCACATCCTCTTCTGGCCAATGACAGCCTCAGTATTTCCCATGAGGGTGAGAGGTCCTaGGACCTGGCTCACCACAGG | + |
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Preference number: 4 (lower is better) Translates to: GGLWSHPLLANDSLSISHEGERS*DLAHHR Trigger: CCTGTGGTGAGCCAGGTCCCAGGACCTCTCACCCTC...ATGGGAAATACTGAGGCTGTCATTGGCCAGAAGAGGATGTGACCAGAGGCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR TCA 90 bp | AGATGGCTTTCATTCATTCAACATGGTGGCCTCTGGTCACATCCTCTTCTGGCCGTGTCTCCCTCAGGGTaGGGGCCTGGCTCAGATGTT | + |
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Preference number: 4 (lower is better) Translates to: RWLSFIQHGGLWSHPLLAVSPSG*GPGSDV Trigger: AACATCTGAGCCAGGCCCTCACCCTGAGGGAGACAC...GGCCAGAAGAGGATGTGACCAGAGGCCACCATGTTGAATGAATGAAAGCCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR GCA 90 bp | GGTGAGCATCCAGGAGTGGTAGAACTGGCTCCTGCGGTTGATCGATTGATTGATGGAGTTCTCAGGGATTaGAGGAGCCCCATCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: GEHPGVVELAPAVDRLIDGVLRD*RSPISR Trigger: TCTGGAGATGGGGCTCCTGCAATCCCTGAGAACTCC...ATCAATCAATCGATCAACCGCAGGAGCCAGTTCTACCACTCCTGGATGCTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR CCA 90 bp | GGTGGCCTCTGGTCACATCCTCTTCTGGCCAATGACAGCCTCAGTATTTCCCATCTCATCTCGTTGTGGTaGCCAAGCTGCACTTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: GGLWSHPLLANDSLSISHLISLW*PSCTCW Trigger: CCAACAAGTGCAGCTTGGCCACCACAACGAGATGAG...ATGGGAAATACTGAGGCTGTCATTGGCCAGAAGAGGATGTGACCAGAGGCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR TCA 90 bp | GAGCCACAACAGAGAAAATGTGGCCCTTGTCTTTCTAAGATGGCTTTCATTCATATGTGCAGGGCCCTGTaGGGCCCATTGGCTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: EPQQRKCGPCLSKMAFIHMCRAL*GPLASR Trigger: CCTGGAAGCCAATGGGCCTCACAGGGCCCTGCACAT...ATGAATGAAAGCCATCTTAGAAAGACAAGGGCCACATTTTCTCTGTTGTGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR TCA 90 bp | CATCCAGGAGTGGTAGAACTGGCTCCTGCGGTTGATCGATTGATTGATCTTGAGTTGGCCTTCCTGACGTaGGTGGTAGATCTTCCACGT | + |
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Preference number: 4 (lower is better) Translates to: HPGVVELAPAVDRLIDLELAFLT*VVDLPR Trigger: ACGTGGAAGATCTACCACTCACGTCAGGAAGGCCAA...CTCAAGATCAATCAATCGATCAACCGCAGGAGCCAGTTCTACCACTCCTGGATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR TCA 90 bp | GGTGGCCTCTGGTCACATCCTCTTCTGGCCAATGACAGCCTCAGTATTTCCCATTGTTTGCATGTTGAATaGAGCTCCTGGGTCAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: GGLWSHPLLANDSLSISHCLHVE*SSWVSS Trigger: ACTGCTGACCCAGGAGCTTCATTCAACATGCAAACA...ATGGGAAATACTGAGGCTGTCATTGGCCAGAAGAGGATGTGACCAGAGGCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR CCA 90 bp | GGTGGCCTCTGGTCACATCCTCTTCTGGCCAATGACAGCCTCAGTATTTCCCATGTTTTCTTGGGCACTTaGCATTTCTTCACCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GGLWSHPLLANDSLSISHVFLGT*HFFTSW Trigger: CCAGCTGGTGAAGAAATGCCAAGTGCCCAAGAAAAC...ATGGGAAATACTGAGGCTGTCATTGGCCAGAAGAGGATGTGACCAGAGGCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR CCA 90 bp | TGGCTTTCATTCATTCAACATGGTGGCCTCTGGTCACATCCTCTTCTGGCCAATTCATCAAGGCTAGGCTaGGCACTGGAGTTCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: WLSFIQHGGLWSHPLLANSSRLG*ALEFSG Trigger: CCCTGAGAACTCCAGTGCCCAGCCTAGCCTTGATGA...ATTGGCCAGAAGAGGATGTGACCAGAGGCCACCATGTTGAATGAATGAAAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR CCA 90 bp | CTTTCATTCATTCAACATGGTGGCCTCTGGTCACATCCTCTTCTGGCCAATGACCTGGCAGCTTCTGGGTaGAGTGGCTTCAGAGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LSFIQHGGLWSHPLLANDLAASG*SGFRAC Trigger: ACAAGCTCTGAAGCCACTCCACCCAGAAGCTGCCAG...GTCATTGGCCAGAAGAGGATGTGACCAGAGGCCACCATGTTGAATGAATGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR CCA 90 bp | ATGCACCATCCTCATCCCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGTGTGCTGGCAGCTTCTaGGTGGAGTGGCTTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: MHHPHPLVGVTCTFMSHLCAGSF*VEWLQS Trigger: GCTCTGAAGCCACTCCACCCAGAAGCTGCCAGCACA...CAGATGTGACATGAAAGTACATGTAACACCAACCAGGGGATGAGGATGGTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR CCA 90 bp | ATGCACCATCCTCATCCCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGCTCTCAGCTCAGAGGTaGGCAGCATGGAGTCACTGG | + |
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Preference number: 4 (lower is better) Translates to: MHHPHPLVGVTCTFMSHLLSAQR*AAWSHW Trigger: CCAGTGACTCCATGCTGCCCACCTCTGAGCTGAGAG...CAGATGTGACATGAAAGTACATGTAACACCAACCAGGGGATGAGGATGGTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR CCA 90 bp | GGTGAGCATCCAGGAGTGGTAGAACTGGCTCCTGCGGTTGATCGATTGATTGATCCCTGTGAGGCCCATTaGCTTCCAGGAATCTTAATA | + |
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Preference number: 4 (lower is better) Translates to: GEHPGVVELAPAVDRLIDPCEAH*LPGILI Trigger: TATTAAGATTCCTGGAAGCCAATGGGCCTCACAGGG...ATCAATCAATCGATCAACCGCAGGAGCCAGTTCTACCACTCCTGGATGCTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR CCA 90 bp | GAGCCACAACAGAGAAAATGTGGCCCTTGTCTTTCTAAGATGGCTTTCATTCATGCAGCATGGAGTCACTaGGCGTGTGCTGGCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: EPQQRKCGPCLSKMAFIHAAWSH*ACAGSF Trigger: GAAGCTGCCAGCACACGCCCAGTGACTCCATGCTGC...ATGAATGAAAGCCATCTTAGAAAGACAAGGGCCACATTTTCTCTGTTGTGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR TCA 90 bp | AGATGGCTTTCATTCATTCAACATGGTGGCCTCTGGTCACATCCTCTTCTGGCCGTTGGCAGATCATGTTaGCCGGATTGTGCTGACAAA | + |
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Preference number: 4 (lower is better) Translates to: RWLSFIQHGGLWSHPLLAVGRSC*PDCADK Trigger: TTTGTCAGCACAATCCGGTCAACATGATCTGCCAAC...GGCCAGAAGAGGATGTGACCAGAGGCCACCATGTTGAATGAATGAAAGCCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR TCA 90 bp | CATCCAGGAGTGGTAGAACTGGCTCCTGCGGTTGATCGATTGATTGATCTTGAGACTATGACATTCCCGTaGCCAATCTGGATGGCGTTT | + |
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Preference number: 4 (lower is better) Translates to: HPGVVELAPAVDRLIDLETMTFP*PIWMAF Trigger: AAACGCCATCCAGATTGGTCACGGGAATGTCATAGT...CTCAAGATCAATCAATCGATCAACCGCAGGAGCCAGTTCTACCACTCCTGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR TCA 90 bp | TCCCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGTGTATATGATTTTAGCCAAGGGTAGAGGGTaGGAGGTCCTGGGACCTGGC | + |
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Preference number: 4 (lower is better) Translates to: SPGWCYMYFHVTSVYMILAKGRG*EVLGPG Trigger: GCCAGGTCCCAGGACCTCTCACCCTCTACCCTTGGC...TAAAATCATATACACAGATGTGACATGAAAGTACATGTAACACCAACCAGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR GCA 90 bp | CTTTCATTCATTCAACATGGTGGCCTCTGGTCACATCCTCTTCTGGCCAATGACGGATGGTCATCTTGTTaGCGTTACCAATGGTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: LSFIQHGGLWSHPLLANDGWSSC*RYQWWR Trigger: ACGCCACCATTGGTAACGGCAACAAGATGACCATCC...GTCATTGGCCAGAAGAGGATGTGACCAGAGGCCACCATGTTGAATGAATGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR CCA 90 bp | TGGCTTTCATTCATTCAACATGGTGGCCTCTGGTCACATCCTCTTCTGGCCAATTTGGCAATGGAGATGTaGCTGTTGGCTCCTTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: WLSFIQHGGLWSHPLLANLAMEM*LLAPCW Trigger: CCAACAAGGAGCCAACAGCCACATCTCCATTGCCAA...ATTGGCCAGAAGAGGATGTGACCAGAGGCCACCATGTTGAATGAATGAAAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR CCA 90 bp | ATGCACCATCCTCATCCCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGTTGATGTGGACTGTCTaGACTGTGTCTCCCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: MHHPHPLVGVTCTFMSHLLMWTV*TVSPSG Trigger: CCCTGAGGGAGACACAGTCCAGACAGTCCACATCAA...CAGATGTGACATGAAAGTACATGTAACACCAACCAGGGGATGAGGATGGTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR GCA 90 bp | TGGCTTTCATTCATTCAACATGGTGGCCTCTGGTCACATCCTCTTCTGGCCAATCCAGATTGTCTCCTGTaGTCAAGTCAACAGGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: WLSFIQHGGLWSHPLLANPDCLL*SSQQEL Trigger: AAGCTCCTGTTGACTTGAGCACAGGAGACAATCTGG...ATTGGCCAGAAGAGGATGTGACCAGAGGCCACCATGTTGAATGAATGAAAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR GCA 90 bp | CATCCAGGAGTGGTAGAACTGGCTCCTGCGGTTGATCGATTGATTGATCTTGAGATGTCCTGGACTTCATaGTCTCTAAGCACAGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: HPGVVELAPAVDRLIDLEMSWTS*SLSTGS Trigger: AGAACCTGTGCTTAGAGAGCATGAAGTCCAGGACAT...CTCAAGATCAATCAATCGATCAACCGCAGGAGCCAGTTCTACCACTCCTGGATG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR CCA 90 bp | TTTCATTCATTCAACATGGTGGCCTCTGGTCACATCCTCTTCTGGCCAATGACACTGTTGGCTCCTTGTTaGCAGATCATGTTGACCGGA | + |
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Preference number: 4 (lower is better) Translates to: FHSFNMVASGHILFWPMTLLAPC*QIMLTG Trigger: TCCGGTCAACATGATCTGCCAACAAGGAGCCAACAG...TGTCATTGGCCAGAAGAGGATGTGACCAGAGGCCACCATGTTGAATGAATGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR CCA 90 bp | ATGCACCATCCTCATCCCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGCCAAGCTGCACTTGTTaGAGCAAGGACTTGTCCATG | + |
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Preference number: 4 (lower is better) Translates to: MHHPHPLVGVTCTFMSHLPSCTC*SKDLSM Trigger: CATGGACAAGTCCTTGCTCCAACAAGTGCAGCTTGG...CAGATGTGACATGAAAGTACATGTAACACCAACCAGGGGATGAGGATGGTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR CCA 90 bp | GAGCCACAACAGAGAAAATGTGGCCCTTGTCTTTCTAAGATGGCTTTCATTCATACAGGTTCTGTGGTCTaGGGGCTACTGTCTCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: EPQQRKCGPCLSKMAFIHTGSVV*GLLSPR Trigger: TCTGGGAGACAGTAGCCCCCAGACCACAGAACCTGT...ATGAATGAAAGCCATCTTAGAAAGACAAGGGCCACATTTTCTCTGTTGTGGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR GCA 90 bp | ATGCACCATCCTCATCCCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGTCATCGCTCAACACCTaGAGGATCTTTTGCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: MHHPHPLVGVTCTFMSHLSSLNT*RIFCSR Trigger: TCTGGAGCAAAAGATCCTGCAGGTGTTGAGCGATGA...CAGATGTGACATGAAAGTACATGTAACACCAACCAGGGGATGAGGATGGTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR CCA 90 bp | TGGCTTTCATTCATTCAACATGGTGGCCTCTGGTCACATCCTCTTCTGGCCAATGAGCTTTCTATGTCCTaGACTTCATGCTCTCTAAGC | + |
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Preference number: 4 (lower is better) Translates to: WLSFIQHGGLWSHPLLANELSMS*TSCSLS Trigger: GCTTAGAGAGCATGAAGTCCAGGACATAGAAAGCTC...ATTGGCCAGAAGAGGATGTGACCAGAGGCCACCATGTTGAATGAATGAAAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| 3UTR CAA 72 bp | GATCGATTGATTGATCTTGAGGCAGGAAAGGTTGATTaGACTTATAGTGGCAGAGGGGTCAGCCTATGGTCC | + |
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Preference number: 4 (lower is better) Translates to: DRLIDLEAGKVD*TYSGRGVSLWS Trigger: GGACCATAGGCTGACCCCTCTGCCACTATAAGTCAAATCAACCTTTCCTGCCTCAAGATCAATCAATCGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR TCA 90 bp | TGGCTTTCATTCATTCAACATGGTGGCCTCTGGTCACATCCTCTTCTGGCCAATCTTTCTCTCTTACTATaGCATTCCCGTGACCAATCT | + |
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Preference number: 4 (lower is better) Translates to: WLSFIQHGGLWSHPLLANLSLLL*HSRDQS Trigger: AGATTGGTCACGGGAATGTCATAGTAAGAGAGAAAG...ATTGGCCAGAAGAGGATGTGACCAGAGGCCACCATGTTGAATGAATGAAAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR GCA 90 bp | CCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGTGTATATGATTTTATAGAGTCACTGGGCGTGTaGTGGCAGCTTCTGGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: PWLVLHVLSCHICVYDFIESLGV*WQLLGG Trigger: TCCACCCAGAAGCTGCCAGCACACGCCCAGTGACTC...TATAAAATCATATACACAGATGTGACATGAAAGTACATGTAACACCAACCAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR CCA 90 bp | TTTCATTCATTCAACATGGTGGCCTCTGGTCACATCCTCTTCTGGCCAATGACAAAGCAGGATTTGATGTaGACTGTCTGGACTGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: FHSFNMVASGHILFWPMTKQDLM*TVWTVS Trigger: AGACACAGTCCAGACAGTCCACATCAAATCCTGCTT...TGTCATTGGCCAGAAGAGGATGTGACCAGAGGCCACCATGTTGAATGAATGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR TCA 90 bp | CTCATCCCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGTGTATATGATCAGGGGACTCTTGTGTaGCTCCAGAATGAGCTATGT | + |
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Preference number: 4 (lower is better) Translates to: LIPWLVLHVLSCHICVYDQGTLV*LQNELC Trigger: ACATAGCTCATTCTGGAGTCACACAAGAGTCCCCTG...ATCATATACACAGATGTGACATGAAAGTACATGTAACACCAACCAGGGGATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR CCA 90 bp | CTCATCCCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGTGTATATGATTGTTGCCGTTACCAATaGTGGCGTCCTCTAGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: LIPWLVLHVLSCHICVYDCCRYQ*WRPLES Trigger: GCTTTCTAGAGGACGCCACCATTGGTAACGGCAACA...ATCATATACACAGATGTGACATGAAAGTACATGTAACACCAACCAGGGGATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS-3UTR TCA 90 bp | CTTGTCTTTCTAAGATGGCTTTCATTCATTCAACATGGTGGCCTCTGGTCACATGGTAAAGGACTTGATTaGGGGTTTTCTTGGGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: LVFLRWLSFIQHGGLWSHGKGLD*GFSWAL Trigger: AAGTGCCCAAGAAAACCCTCAATCAAGTCCTTTACC...ATGTGACCAGAGGCCACCATGTTGAATGAATGAAAGCCATCTTAGAAAGACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS-3UTR GCA 90 bp | CTCATCCCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGTGTATATGATCCTGGCTCAGATGTTTaGATGTTGAATGAAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LIPWLVLHVLSCHICVYDPGSDV*MLNEAP Trigger: AGGAGCTTCATTCAACATGCAAACATCTGAGCCAGG...ATCATATACACAGATGTGACATGAAAGTACATGTAACACCAACCAGGGGATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS-3UTR CCA 90 bp | CCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGTGTATATGATTTTATAAGGCTCATCTCGTTGTaGTGGCCAAGCTGCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PWLVLHVLSCHICVYDFIRLISL*WPSCTC Trigger: ACAAGTGCAGCTTGGCCACCACAACGAGATGAGCCT...TATAAAATCATATACACAGATGTGACATGAAAGTACATGTAACACCAACCAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS-3UTR CCA 90 bp | CCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGTGTATATGATTTTATAAGCTTCTGGGTGGAGTaGCTTCAGAGCTTGTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: PWLVLHVLSCHICVYDFISFWVE*LQSLYL Trigger: CAGGTACAAGCTCTGAAGCCACTCCACCCAGAAGCT...TATAAAATCATATACACAGATGTGACATGAAAGTACATGTAACACCAACCAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS-3UTR CCA 90 bp | TCCCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGTGTATATGATTTTACGTTTGAATTGGCAATaGAGATGTGGCTGTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPGWCYMYFHVTSVYMILRLNWQ*RCGCWL Trigger: GAGCCAACAGCCACATCTCCATTGCCAATTCAAACG...TAAAATCATATACACAGATGTGACATGAAAGTACATGTAACACCAACCAGGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS-3UTR CCA 90 bp | TCCCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGTGTATATGATTTTAGGATGGCGTTTGAATTaGCAATGGAGATGTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPGWCYMYFHVTSVYMILGWRLN*QWRCGC Trigger: ACAGCCACATCTCCATTGCCAATTCAAACGCCATCC...TAAAATCATATACACAGATGTGACATGAAAGTACATGTAACACCAACCAGGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS-3UTR GCA 90 bp | CCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGTGTATATGATTTTATAACCTGCAGGATCTTTTaGTCCAGATTGTCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PWLVLHVLSCHICVYDFITCRIF*SRLSPV Trigger: CACAGGAGACAATCTGGAGCAAAAGATCCTGCAGGT...TATAAAATCATATACACAGATGTGACATGAAAGTACATGTAACACCAACCAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS-3UTR CCA 90 bp | CCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGTGTATATGATTTTATAGGTGCTTATTTCTCATaGAATACAGGAGTGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PWLVLHVLSCHICVYDFIGAYFS*NTGVGS Trigger: TGAACCCACTCCTGTATTCCATGAGAAATAAGCACC...TATAAAATCATATACACAGATGTGACATGAAAGTACATGTAACACCAACCAGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS CCA 90 bp | GGTGGGCAGCATGGAGTCACTGGGCGTGTGCTGGCAGCTTCTGGGTaGAGTGGCTTCAGAGCTTGTACCTGTGTCTTCCTTCTTCGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GGQHGVTGRVLAASG*SGFRACTCVFLLRL Trigger: GAGCCGAAGAAGGAAGACACAGGTACAAGCTCTGAAGCCACTCCACCCAGAAGCTGCCAGCACACGCCCAGTGACTCCATGCTGCCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS CCA 90 bp | GCTCTCAGCTCAGAGGTGGGCAGCATGGAGTCACTGGGCGTGTGCTaGCAGCTTCTGGGTGGAGTGGCTTCAGAGCTTGTACCTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALSSEVGSMESLGVC*QLLGGVASELVPVS Trigger: AGACACAGGTACAAGCTCTGAAGCCACTCCACCCAGAAGCTGCCAGCACACGCCCAGTGACTCCATGCTGCCCACCTCTGAGCTGAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS GCA 90 bp | ATAGCTCTCAGCTCAGAGGTGGGCAGCATGGAGTCACTGGGCGTGTaGTGGCAGCTTCTGGGTGGAGTGGCTTCAGAGCTTGTACCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: IALSSEVGSMESLGV*WQLLGGVASELVPV Trigger: CACAGGTACAAGCTCTGAAGCCACTCCACCCAGAAGCTGCCAGCACACGCCCAGTGACTCCATGCTGCCCACCTCTGAGCTGAGAGCTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS CCA 90 bp | CCCATCTCCAGAAGCAGCCCCGCCTATGCTCCATGTTGCAGGCTCTaGGGAGGACACTCTGTCCTCCTTCTTCAGGCGGTAAAGGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: PISRSSPAYAPCCRL*GGHSVLLLQAVKDL Trigger: CAAGTCCTTTACCGCCTGAAGAAGGAGGACAGAGTGTCCTCCCCAGAGCCTGCAACATGGAGCATAGGCGGGGCTGCTTCTGGAGATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029018.14 ENSMUST00000109116.3 |
||
| CDS CCA 90 bp | CAGAGGTGGGCAGCATGGAGTCACTGGGCGTGTGCTGGCAGCTTCTaGGTGGAGTGGCTTCAGAGCTTGTACCTGTGTCTTCCTTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: QRWAAWSHWACAGSF*VEWLQSLYLCLPSS Trigger: CGAAGAAGGAAGACACAGGTACAAGCTCTGAAGCCACTCCACCCAGAAGCTGCCAGCACACGCCCAGTGACTCCATGCTGCCCACCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS CCA 90 bp | ACAGGAGTGGGTTCACTTCTTTGGCTGTCGTCATTCCCAGAGCCTTaGCGATGTGCAGGGCCCTGTGAGGCCCATTGGCTTCCAGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: TGVGSLLWLSSFPEP*RCAGPCEAHWLPGI Trigger: GATTCCTGGAAGCCAATGGGCCTCACAGGGCCCTGCACATCGCCAAGGCTCTGGGAATGACGACAGCCAAAGAAGTGAACCCACTCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029018.14 ENSMUST00000109116.3 |
||
| CDS-3UTR CAA 90 bp | GGTGGCCTCTGGTCACATCCTCTTCTGGCCAATGACAGCCTCAGTATTTCCCATGTCATTCCCAGAGCCTaGGCGATGTGCAGGGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGLWSHPLLANDSLSISHVIPRA*AMCRAL Trigger: CAGGGCCCTGCACATCGCCAAGGCTCTGGGAATGAC...ATGGGAAATACTGAGGCTGTCATTGGCCAGAAGAGGATGTGACCAGAGGCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS TCA 90 bp | TCTTGTTGCCGTTACCAATGGTGGCGTCCTCTAGAAAGCAGGATTTaGTGTGGACTGTCTGGACTGTGTCTCCCTCAGGGTGAGGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SCCRYQWWRPLESRI*CGLSGLCLPQGEGL Trigger: CAGGCCCTCACCCTGAGGGAGACACAGTCCAGACAGTCCACATCAAATCCTGCTTTCTAGAGGACGCCACCATTGGTAACGGCAACAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS-3UTR CAA 90 bp | GGTGAGCATCCAGGAGTGGTAGAACTGGCTCCTGCGGTTGATCGATTGATTGATTGGAGTTCTCAGGGATaGCAGGAGCCCCATCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GEHPGVVELAPAVDRLIDWSSQG*QEPHLQ Trigger: CTGGAGATGGGGCTCCTGCAATCCCTGAGAACTCCA...ATCAATCAATCGATCAACCGCAGGAGCCAGTTCTACCACTCCTGGATGCTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS-3UTR CAA 90 bp | GGTGAGCATCCAGGAGTGGTAGAACTGGCTCCTGCGGTTGATCGATTGATTGATGCTGTTGGCTCCTTGTaGGCAGATCATGTTGACCGG | + |
|
Preference number: 5 (lower is better) Translates to: GEHPGVVELAPAVDRLIDAVGSL*ADHVDR Trigger: CCGGTCAACATGATCTGCCAACAAGGAGCCAACAGC...ATCAATCAATCGATCAACCGCAGGAGCCAGTTCTACCACTCCTGGATGCTCACC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS TCA 90 bp | GGGAGGACACTCTGTCCTCCTTCTTCAGGCGGTAAAGGACTTGATTaGGGGTTTTCTTGGGCACTTGGCATTTCTTCACCAGCTGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GRTLCPPSSGGKGLD*GFSWALGISSPAGQ Trigger: TTGGCCAGCTGGTGAAGAAATGCCAAGTGCCCAAGAAAACCCTCAATCAAGTCCTTTACCGCCTGAAGAAGGAGGACAGAGTGTCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029018.14 ENSMUST00000109116.3 |
||
| CDS TCA 90 bp | GAGAGGTCCTGGGACCTGGCTCACCACAGGCTTTCTCTCTTACTATaGCATTCCCGTGACCAATCTGGATGGCGTTTGAATTGGCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: ERSWDLAHHRLSLLL*HSRDQSGWRLNWQW Trigger: CCATTGCCAATTCAAACGCCATCCAGATTGGTCACGGGAATGTCATAGTAAGAGAGAAAGCCTGTGGTGAGCCAGGTCCCAGGACCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS TCA 90 bp | ACATCCAGGGCTACATGGCAAGACTATGTCTTGGCCTTCCTGACGTaGGTGGTAGATCTTCCACGTCTGTCCGTCATAGCTCAGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TSRATWQDYVLAFLT*VVDLPRLSVIAQKV Trigger: CACCTTCTGAGCTATGACGGACAGACGTGGAAGATCTACCACTCACGTCAGGAAGGCCAAGACATAGTCTTGCCATGTAGCCCTGGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109116.3 |
||
| CDS TCA 90 bp | CTCTTGTGTGACTCCAGAATGAGCTATGTCTTGGCCTTCCTGACGTaGGTGGTAGATCTTCCACGTCTGTCCGTCATAGCTCAGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLCDSRMSYVLAFLT*VVDLPRLSVIAQKV Trigger: CACCTTCTGAGCTATGACGGACAGACGTGGAAGATCTACCACTCACGTCAGGAAGGCCAAGACATAGCTCATTCTGGAGTCACACAAGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS TCA 90 bp | GGACCTGGCTCACCACAGGCTTTCTCTCTTACTATGACATTCCCGTaGCCAATCTGGATGGCGTTTGAATTGGCAATGGAGATGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GPGSPQAFSLTMTFP*PIWMAFELAMEMWL Trigger: CAGCCACATCTCCATTGCCAATTCAAACGCCATCCAGATTGGTCACGGGAATGTCATAGTAAGAGAGAAAGCCTGTGGTGAGCCAGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS-3UTR CAA 90 bp | CATCCAGGAGTGGTAGAACTGGCTCCTGCGGTTGATCGATTGATTGATCTTGAGGTGGCTGTTGGCTCCTaGTTGGCAGATCATGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: HPGVVELAPAVDRLIDLEVAVGS*LADHVD Trigger: GTCAACATGATCTGCCAACAAGGAGCCAACAGCCAC...CTCAAGATCAATCAATCGATCAACCGCAGGAGCCAGTTCTACCACTCCTGGATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS-3UTR CAA 90 bp | GGTGAGCATCCAGGAGTGGTAGAACTGGCTCCTGCGGTTGATCGATTGATTGATGCTCAGTCCTGTGTCTaGAGAGCTTTCTATGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GEHPGVVELAPAVDRLIDAQSCV*RAFYVL Trigger: CAGGACATAGAAAGCTCTCAAGACACAGGACTGAGC...ATCAATCAATCGATCAACCGCAGGAGCCAGTTCTACCACTCCTGGATGCTCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS-3UTR CAA 90 bp | CTTGTCTTTCTAAGATGGCTTTCATTCATTCAACATGGTGGCCTCTGGTCACATCGCCTATGCTCCATGTaGCAGGCTCTGGGGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LVFLRWLSFIQHGGLWSHRLCSM*QALGRT Trigger: TGTCCTCCCCAGAGCCTGCAACATGGAGCATAGGCG...ATGTGACCAGAGGCCACCATGTTGAATGAATGAAAGCCATCTTAGAAAGACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS-3UTR CAA 90 bp | TTTCATTCATTCAACATGGTGGCCTCTGGTCACATCCTCTTCTGGCCAATGACAGTGGCCAAGCTGCACTaGTTGGAGCAAGGACTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: FHSFNMVASGHILFWPMTVAKLH*LEQGLV Trigger: GACAAGTCCTTGCTCCAACAAGTGCAGCTTGGCCAC...TGTCATTGGCCAGAAGAGGATGTGACCAGAGGCCACCATGTTGAATGAATGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS-3UTR CAA 90 bp | TGGCTTTCATTCATTCAACATGGTGGCCTCTGGTCACATCCTCTTCTGGCCAATTGGATGGTCATCTTGTaGCCGTTACCAATGGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: WLSFIQHGGLWSHPLLANWMVIL*PLPMVA Trigger: CGCCACCATTGGTAACGGCAACAAGATGACCATCCA...ATTGGCCAGAAGAGGATGTGACCAGAGGCCACCATGTTGAATGAATGAAAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS TCA 90 bp | AGCAAGAAGATCTCTGTGGGTTCAAGACCAGCTTGGTCTACATGGTaGGTTCTAGGACATCCAGGGCTACATGGCAAGACTATGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SKKISVGSRPAWSTW*VLGHPGLHGKTMSW Trigger: CCAAGACATAGTCTTGCCATGTAGCCCTGGATGTCCTAGAACTCACCATGTAGACCAAGCTGGTCTTGAACCCACAGAGATCTTCTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109116.3 |
||
| CDS-3UTR CAA 90 bp | TGGCTTTCATTCATTCAACATGGTGGCCTCTGGTCACATCCTCTTCTGGCCAATCAGGCGGTAAAGGACTaGATTGAGGGTTTTCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: WLSFIQHGGLWSHPLLANQAVKD*IEGFLG Trigger: CCCAAGAAAACCCTCAATCAAGTCCTTTACCGCCTG...ATTGGCCAGAAGAGGATGTGACCAGAGGCCACCATGTTGAATGAATGAAAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS-3UTR CAA 90 bp | TTTCATTCATTCAACATGGTGGCCTCTGGTCACATCCTCTTCTGGCCAATGACAATGGAGATGTGGCTGTaGGCTCCTTGTTGGCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: FHSFNMVASGHILFWPMTMEMWL*APCWQI Trigger: GATCTGCCAACAAGGAGCCAACAGCCACATCTCCAT...TGTCATTGGCCAGAAGAGGATGTGACCAGAGGCCACCATGTTGAATGAATGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS CCA 90 bp | TCTTCCACGTCTGTCCGTCATAGCTCAGAAGGTGCTTATTTCTCATaGAATACAGGAGTGGGTTCACTTCTTTGGCTGTCGTCATTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSTSVRHSSEGAYFS*NTGVGSLLWLSSFP Trigger: TGGGAATGACGACAGCCAAAGAAGTGAACCCACTCCTGTATTCCATGAGAAATAAGCACCTTCTGAGCTATGACGGACAGACGTGGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029018.14 ENSMUST00000109116.3 |
||
| CDS-3UTR CAA 90 bp | TTTCATTCATTCAACATGGTGGCCTCTGGTCACATCCTCTTCTGGCCAATGACAGGTTTTCTTGGGCACTaGGCATTTCTTCACCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FHSFNMVASGHILFWPMTGFLGH*AFLHQL Trigger: CAGCTGGTGAAGAAATGCCAAGTGCCCAAGAAAACC...TGTCATTGGCCAGAAGAGGATGTGACCAGAGGCCACCATGTTGAATGAATGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS-3UTR CAA 90 bp | AGATGGCTTTCATTCATTCAACATGGTGGCCTCTGGTCACATCCTCTTCTGGCCCAATCTGGATGGCGTTaGAATTGGCAATGGAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: RWLSFIQHGGLWSHPLLAQSGWR*NWQWRC Trigger: ACATCTCCATTGCCAATTCAAACGCCATCCAGATTG...GGCCAGAAGAGGATGTGACCAGAGGCCACCATGTTGAATGAATGAAAGCCATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS-3UTR CAA 90 bp | TGGCTTTCATTCATTCAACATGGTGGCCTCTGGTCACATCCTCTTCTGGCCAATATCTTTTGCTCCAGATaGTCTCCTGTGCTCAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: WLSFIQHGGLWSHPLLANIFCSR*SPVLKS Trigger: TGACTTGAGCACAGGAGACAATCTGGAGCAAAAGAT...ATTGGCCAGAAGAGGATGTGACCAGAGGCCACCATGTTGAATGAATGAAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS-3UTR CAA 90 bp | CTCATCCCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGTGTATATGATGAGTGGCTTCAGAGCTaGTACCTGTGTCTTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LIPWLVLHVLSCHICVYDEWLQS*YLCLPS Trigger: AGAAGGAAGACACAGGTACAAGCTCTGAAGCCACTC...ATCATATACACAGATGTGACATGAAAGTACATGTAACACCAACCAGGGGATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS-3UTR CAA 90 bp | CCCTGGTTGGTGTTACATGTACTTTCATGTCACATCTGTGTATATGATTTTATATCAGATGTTTGCATGTaGAATGAAGCTCCTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PWLVLHVLSCHICVYDFISDVCM*NEAPGS Trigger: TGACCCAGGAGCTTCATTCAACATGCAAACATCTGA...TATAAAATCATATACACAGATGTGACATGAAAGTACATGTAACACCAACCAGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS GCA 72 bp | AGCTCAGAGGTGGGCAGCATGGAGTCACTGGGCGTGTaGTGGCAGCTTCTGGGTGGAGTGGCTTCAGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SSEVGSMESLGV*WQLLGGVASEL Trigger: AAGCTCTGAAGCCACTCCACCCAGAAGCTGCCAGCACACGCCCAGTGACTCCATGCTGCCCACCTCTGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS CCA 72 bp | TCAGAGGTGGGCAGCATGGAGTCACTGGGCGTGTGCTaGCAGCTTCTGGGTGGAGTGGCTTCAGAGCTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: SEVGSMESLGVC*QLLGGVASELV Trigger: TACAAGCTCTGAAGCCACTCCACCCAGAAGCTGCCAGCACACGCCCAGTGACTCCATGCTGCCCACCTCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS CCA 72 bp | GGTTCACTTCTTTGGCTGTCGTCATTCCCAGAGCCTTaGCGATGTGCAGGGCCCTGTGAGGCCCATTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GSLLWLSSFPEP*RCAGPCEAHWL Trigger: AAGCCAATGGGCCTCACAGGGCCCTGCACATCGCCAAGGCTCTGGGAATGACGACAGCCAAAGAAGTGAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029018.14 ENSMUST00000109116.3 |
||
| CDS CCA 72 bp | AGGCGTCCCATGCCAAGGGTAGAGGGTGAGAGGTCCTaGGACCTGGCTCACCACAGGCTTTCTCTCTTACTA | + |
|
Preference number: 6 (lower is better) Translates to: RRPMPRVEGERS*DLAHHRLSLLL Trigger: TAGTAAGAGAGAAAGCCTGTGGTGAGCCAGGTCCCAGGACCTCTCACCCTCTACCCTTGGCATGGGACGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS CAA 90 bp | TGCATCCCCCACGAGGCTCATCTCGTTGTGGTGGCCAAGCTGCACTaGTTGGAGCAAGGACTTGTCCATGTAGATGTACTGAGCTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: CIPHEAHLVVVAKLH*LEQGLVHVDVLSSV Trigger: CACGGAGCTCAGTACATCTACATGGACAAGTCCTTGCTCCAACAAGTGCAGCTTGGCCACCACAACGAGATGAGCCTCGTGGGGGATGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS TCA 72 bp | CCTCAGGGTGAGGGCCTGGCTCAGATGTTTGCATGTTaGATGAAGCTCCTGGGTCAGCAGTGGTGGTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: PQGEGLAQMFAC*MKLLGQQWWLT Trigger: TGTCAACCACCACTGCTGACCCAGGAGCTTCATTCAACATGCAAACATCTGAGCCAGGCCCTCACCCTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
||
| CDS GCA 72 bp | GGGCCGCCGTCATCGCTCAACACCTGCAGGATCTTTTaGTCCAGATTGTCTCCTGTGCTCAAGTCAACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GPPSSLNTCRIF*SRLSPVLKSTG Trigger: TCCTGTTGACTTGAGCACAGGAGACAATCTGGAGCAAAAGATCCTGCAGGTGTTGAGCGATGACGGCGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029018.14 ENSMUST00000109116.3 |
||
| CDS CCA 72 bp | AGGGTTTTCTTGGGCACTTGGCATTTCTTCACCAGCTaGCCAATCTTCACAGGGCCGCCGTCATCGCTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: RVFLGTWHFFTS*PIFTGPPSSLN Trigger: GTTGAGCGATGACGGCGGCCCTGTGAAGATTGGCCAGCTGGTGAAGAAATGCCAAGTGCCCAAGAAAACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029018.14 ENSMUST00000109116.3 |
||
| CDS CAA 72 bp | AGGGCCGCCGTCATCGCTCAACACCTGCAGGATCTTTaGCTCCAGATTGTCTCCTGTGCTCAAGTCAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: RAAVIAQHLQDL*LQIVSCAQVNR Trigger: CCTGTTGACTTGAGCACAGGAGACAATCTGGAGCAAAAGATCCTGCAGGTGTTGAGCGATGACGGCGGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029018.14 ENSMUST00000109116.3 |
||
| CDS CAA 72 bp | CCGTTACCAATGGTGGCGTCCTCTAGAAAGCAGGATTaGATGTGGACTGTCTGGACTGTGTCTCCCTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PLPMVASSRKQD*MWTVWTVSPSG Trigger: CCCTGAGGGAGACACAGTCCAGACAGTCCACATCAAATCCTGCTTTCTAGAGGACGCCACCATTGGTAACGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS TCA 72 bp | CGTTACCAATGGTGGCGTCCTCTAGAAAGCAGGATTTaGTGTGGACTGTCTGGACTGTGTCTCCCTCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: RYQWWRPLESRI*CGLSGLCLPQG Trigger: ACCCTGAGGGAGACACAGTCCAGACAGTCCACATCAAATCCTGCTTTCTAGAGGACGCCACCATTGGTAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS CAA 72 bp | CACGAGGCTCATCTCGTTGTGGTGGCCAAGCTGCACTaGTTGGAGCAAGGACTTGTCCATGTAGATGTACTG | + |
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Preference number: 6 (lower is better) Translates to: HEAHLVVVAKLH*LEQGLVHVDVL Trigger: CAGTACATCTACATGGACAAGTCCTTGCTCCAACAAGTGCAGCTTGGCCACCACAACGAGATGAGCCTCGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS CAA 90 bp | CTCTGGGGAGGACACTCTGTCCTCCTTCTTCAGGCGGTAAAGGACTaGATTGAGGGTTTTCTTGGGCACTTGGCATTTCTTCACCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LWGGHSVLLLQAVKD*IEGFLGHLAFLHQL Trigger: CAGCTGGTGAAGAAATGCCAAGTGCCCAAGAAAACCCTCAATCAAGTCCTTTACCGCCTGAAGAAGGAGGACAGAGTGTCCTCCCCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029018.14 ENSMUST00000109116.3 |
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| CDS TCA 72 bp | GACTCCAGAATGAGCTATGTCTTGGCCTTCCTGACGTaGGTGGTAGATCTTCCACGTCTGTCCGTCATAGCT | + |
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Preference number: 6 (lower is better) Translates to: DSRMSYVLAFLT*VVDLPRLSVIA Trigger: AGCTATGACGGACAGACGTGGAAGATCTACCACTCACGTCAGGAAGGCCAAGACATAGCTCATTCTGGAGTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS TCA 72 bp | TTGATGTGGACTGTCTGGACTGTGTCTCCCTCAGGGTaGGGGCCTGGCTCAGATGTTTGCATGTTGAATGAA | + |
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Preference number: 6 (lower is better) Translates to: LMWTVWTVSPSG*GPGSDVCMLNE Trigger: TTCATTCAACATGCAAACATCTGAGCCAGGCCCTCACCCTGAGGGAGACACAGTCCAGACAGTCCACATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS TCA 72 bp | GCTACATGGCAAGACTATGTCTTGGCCTTCCTGACGTaGGTGGTAGATCTTCCACGTCTGTCCGTCATAGCT | + |
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Preference number: 6 (lower is better) Translates to: ATWQDYVLAFLT*VVDLPRLSVIA Trigger: AGCTATGACGGACAGACGTGGAAGATCTACCACTCACGTCAGGAAGGCCAAGACATAGTCTTGCCATGTAGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109116.3 |
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| CDS CCA 72 bp | TCTCCAGACTCCATGACTTCACCCTTTGACCTAAGGTaGATGGTCATCTTGTTGCCGTTACCAATGGTGGCG | + |
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Preference number: 6 (lower is better) Translates to: SPDSMTSPFDLR*MVILLPLPMVA Trigger: CGCCACCATTGGTAACGGCAACAAGATGACCATCCACCTTAGGTCAAAGGGTGAAGTCATGGAGTCTGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS CAA 72 bp | TCATCGCTCAACACCTGCAGGATCTTTTGCTCCAGATaGTCTCCTGTGCTCAAGTCAACAGGAGCTTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SSLNTCRIFCSR*SPVLKSTGASA Trigger: GGCAGAAGCTCCTGTTGACTTGAGCACAGGAGACAATCTGGAGCAAAAGATCCTGCAGGTGTTGAGCGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029018.14 ENSMUST00000109116.3 |
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| CDS CAA 90 bp | CCAGACTCCATGACTTCACCCTTTGACCTAAGGTGGATGGTCATCTaGTTGCCGTTACCAATGGTGGCGTCCTCTAGAAAGCAGGATTTG | + |
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Preference number: 6 (lower is better) Translates to: PDSMTSPFDLRWMVI*LPLPMVASSRKQDL Trigger: CAAATCCTGCTTTCTAGAGGACGCCACCATTGGTAACGGCAACAAGATGACCATCCACCTTAGGTCAAAGGGTGAAGTCATGGAGTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS TCA 72 bp | GCTCCTTGTTGGCAGATCATGTTGACCGGATTGTGCTaGCAAATAATCGCAGGGGACTCTTGTGTGACTCCA | + |
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Preference number: 6 (lower is better) Translates to: APCWQIMLTGLC*QIIAGDSCVTP Trigger: TGGAGTCACACAAGAGTCCCCTGCGATTATTTGTCAGCACAATCCGGTCAACATGATCTGCCAACAAGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS TCA 72 bp | TGGGACCTGGCTCACCACAGGCTTTCTCTCTTACTATaGCATTCCCGTGACCAATCTGGATGGCGTTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: WDLAHHRLSLLL*HSRDQSGWRLN Trigger: ATTCAAACGCCATCCAGATTGGTCACGGGAATGTCATAGTAAGAGAGAAAGCCTGTGGTGAGCCAGGTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS TCA 72 bp | CTCTTCACTGTCTCCAGACTCCATGACTTCACCCTTTaGCCTAAGGTGGATGGTCATCTTGTTGCCGTTACC | + |
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Preference number: 6 (lower is better) Translates to: LFTVSRLHDFTL*PKVDGHLVAVT Trigger: GGTAACGGCAACAAGATGACCATCCACCTTAGGTCAAAGGGTGAAGTCATGGAGTCTGGAGACAGTGAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS CCA 72 bp | TCCAGGAATCTTAATATTCTTTCATCAAGGCTAGGCTaGGCACTGGAGTTCTCAGGGATTGCAGGAGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: SRNLNILSSRLG*ALEFSGIAGAP Trigger: TGGGGCTCCTGCAATCCCTGAGAACTCCAGTGCCCAGCCTAGCCTTGATGAAAGAATATTAAGATTCCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029018.14 ENSMUST00000109116.3 |
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| CDS CAA 72 bp | GACCGGATTGTGCTGACAAATAATCGCAGGGGACTCTaGTGTGACTCCAGAATGAGCTATGTCTTGGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: DRIVLTNNRRGL*CDSRMSYVLAF Trigger: GAAGGCCAAGACATAGCTCATTCTGGAGTCACACAAGAGTCCCCTGCGATTATTTGTCAGCACAATCCGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS CAA 72 bp | ACTTCACCCTTTGACCTAAGGTGGATGGTCATCTTGTaGCCGTTACCAATGGTGGCGTCCTCTAGAAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: TSPFDLRWMVIL*PLPMVASSRKQ Trigger: CTGCTTTCTAGAGGACGCCACCATTGGTAACGGCAACAAGATGACCATCCACCTTAGGTCAAAGGGTGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS CAA 90 bp | GACTCCATGACTTCACCCTTTGACCTAAGGTGGATGGTCATCTTGTaGCCGTTACCAATGGTGGCGTCCTCTAGAAAGCAGGATTTGATG | + |
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Preference number: 6 (lower is better) Translates to: DSMTSPFDLRWMVIL*PLPMVASSRKQDLM Trigger: CATCAAATCCTGCTTTCTAGAGGACGCCACCATTGGTAACGGCAACAAGATGACCATCCACCTTAGGTCAAAGGGTGAAGTCATGGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS TCA 72 bp | CTCTGTCCTCCTTCTTCAGGCGGTAAAGGACTTGATTaGGGGTTTTCTTGGGCACTTGGCATTTCTTCACCA | + |
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Preference number: 6 (lower is better) Translates to: LCPPSSGGKGLD*GFSWALGISSP Trigger: TGGTGAAGAAATGCCAAGTGCCCAAGAAAACCCTCAATCAAGTCCTTTACCGCCTGAAGAAGGAGGACAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029018.14 ENSMUST00000109116.3 |
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| CDS TCA 72 bp | TACTATGACATTCCCGTGACCAATCTGGATGGCGTTTaGATTGGCAATGGAGATGTGGCTGTTGGCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: YYDIPVTNLDGV*IGNGDVAVGSL Trigger: CAAGGAGCCAACAGCCACATCTCCATTGCCAATTCAAACGCCATCCAGATTGGTCACGGGAATGTCATAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS CAA 72 bp | GGACACTCTGTCCTCCTTCTTCAGGCGGTAAAGGACTaGATTGAGGGTTTTCTTGGGCACTTGGCATTTCTT | + |
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Preference number: 6 (lower is better) Translates to: GHSVLLLQAVKD*IEGFLGHLAFL Trigger: AAGAAATGCCAAGTGCCCAAGAAAACCCTCAATCAAGTCCTTTACCGCCTGAAGAAGGAGGACAGAGTGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029018.14 ENSMUST00000109116.3 |
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| CDS CAA 90 bp | TTTAATAGGCAGAAGCAAGAAGATCTCTGTGGGTTCAAGACCAGCTaGGTCTACATGGTGAGTTCTAGGACATCCAGGGCTACATGGCAA | + |
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Preference number: 6 (lower is better) Translates to: FNRQKQEDLCGFKTS*VYMVSSRTSRATWQ Trigger: TTGCCATGTAGCCCTGGATGTCCTAGAACTCACCATGTAGACCAAGCTGGTCTTGAACCCACAGAGATCTTCTTGCTTCTGCCTATTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109116.3 |
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| CDS TCA 72 bp | TCACCACAGGCTTTCTCTCTTACTATGACATTCCCGTaGCCAATCTGGATGGCGTTTGAATTGGCAATGGAG | + |
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Preference number: 6 (lower is better) Translates to: SPQAFSLTMTFP*PIWMAFELAME Trigger: CTCCATTGCCAATTCAAACGCCATCCAGATTGGTCACGGGAATGTCATAGTAAGAGAGAAAGCCTGTGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029018.14 |
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| CDS CCA 72 bp | TCTGTCCGTCATAGCTCAGAAGGTGCTTATTTCTCATaGAATACAGGAGTGGGTTCACTTCTTTGGCTGTCG | + |
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Preference number: 6 (lower is better) Translates to: SVRHSSEGAYFS*NTGVGSLLWLS Trigger: CGACAGCCAAAGAAGTGAACCCACTCCTGTATTCCATGAGAAATAAGCACCTTCTGAGCTATGACGGACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029018.14 ENSMUST00000109116.3 |
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