Pregenerated sensors for ZBED6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094410Ensembl transcript IDs: ENSMUST00000179598.4
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGTACTCATCTACTACTGCTACCGCAGCGGGGAGCAAGGAGCTTTTaGTCCCAACAGCAACACTGCCTGCGGCTGAGCTATCCAGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: STHLLLLPQRGARSF*SQQQHCLRLSYPEN Trigger: GTTCTCTGGATAGCTCAGCCGCAGGCAGTGTTGCTGTTGGGAGCAAAAGCTCCTTGCTCCCCGCTGCGGTAGCAGTAGTAGATGAGTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS TCA 90 bp | AGTCTCTGCAGGGAAAAGAGGAGATGGTGGATTAGGGGTAGCACCTaGTTCAATCCTGTTGTCTTCACACTCACTCTCTGGGTGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: SLCREKRRWWIRGST*FNPVVFTLTLWVAS Trigger: GGAGGCCACCCAGAGAGTGAGTGTGAAGACAACAGGATTGAATCAGGTGCTACCCCTAATCCACCATCTCCTCTTTTCCCTGCAGAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS GCA 90 bp | GGCAACTCAGATACTGAATGGCAACTTGGGTCAAAGCTGGCCATATaGTCACCTTCCTCTGCCAGTAAACCAAAGGGTCATCACCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: GNSDTEWQLGSKLAI*SPSSASKPKGHHLL Trigger: CAGGAGGTGATGACCCTTTGGTTTACTGGCAGAGGAAGGTGAGCATATGGCCAGCTTTGACCCAAGTTGCCATTCAGTATCTGAGTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS TCA 90 bp | AAACCAAAGGGTCATCACCTCCTGAGAGCTCTGAATACTTCTCTTTaGAGTACTCATCTACTACTGCTACCGCAGCGGGGAGCAAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: KPKGHHLLRALNTSL*STHLLLLPQRGARS Trigger: GCTCCTTGCTCCCCGCTGCGGTAGCAGTAGTAGATGAGTACTTCAAAGAGAAGTATTCAGAGCTCTCAGGAGGTGATGACCCTTTGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CCA 90 bp | TGCATTCAGATTGCCAACTACACATGGGGCAACTCAGATACTGAATaGCAACTTGGGTCAAAGCTGGCCATATGCTCACCTTCCTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: CIQIANYTWGNSDTE*QLGSKLAICSPSSA Trigger: GGCAGAGGAAGGTGAGCATATGGCCAGCTTTGACCCAAGTTGCCATTCAGTATCTGAGTTGCCCCATGTGTAGTTGGCAATCTGAATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS GCA 90 bp | ATTTGCGGCTGCATTTTCACAATGTGTCGTCGTTTCTCTCTCTTGTaGGTGCACCGGATTATCTTGGTCTGCAACAGGAATAGGACTCTC | + |
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Preference number: 5 (lower is better) Translates to: ICGCIFTMCRRFSLL*VHRIILVCNRNRTL Trigger: GAGAGTCCTATTCCTGTTGCAGACCAAGATAATCCGGTGCACGCACAAGAGAGAGAAACGACGACACATTGTGAAAATGCAGCCGCAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS TCA 90 bp | TTCTGCCACCATCTTTCCCTCTACCACATCGTCTTCGTCTGTGTTTaGATTAATGGAAACGCACCCCAGAATCCCAGCATCACCAAAAGT | + |
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Preference number: 5 (lower is better) Translates to: FCHHLSLYHIVFVCV*INGNAPQNPSITKS Trigger: ACTTTTGGTGATGCTGGGATTCTGGGGTGCGTTTCCATTAATTCAAACACAGACGAAGACGATGTGGTAGAGGGAAAGATGGTGGCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS TCA 90 bp | TCACACAGGTTACAAATTGCTCTCCAGGTATATTGGGGGTCAACATaGAAGAAGTGCCACACAATGGAGGTTTTGGCTCTGGTACTAGGC | + |
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Preference number: 5 (lower is better) Translates to: SHRLQIALQVYWGST*KKCHTMEVLALVLG Trigger: GCCTAGTACCAGAGCCAAAACCTCCATTGTGTGGCACTTCTTTCATGTTGACCCCCAATATACCTGGAGAGCAATTTGTAACCTGTGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS GCA 90 bp | AAACGCACCCCAGAATCCCAGCATCACCAAAAGTACTGCATCTTCTaGCAGGAGAGATTGAGGAAACTGGTACACTTAGAGTACATACAC | + |
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Preference number: 5 (lower is better) Translates to: KRTPESQHHQKYCIF*QERLRKLVHLEYIH Trigger: GTGTATGTACTCTAAGTGTACCAGTTTCCTCAATCTCTCCTGGCAGAAGATGCAGTACTTTTGGTGATGCTGGGATTCTGGGGTGCGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS TCA 90 bp | TTTGATGAGAAAGCGCCCTCTTTTTGCCCTCAGGGCATCAGATGCTaGCTTATCGCGCTTCTTACCCATTCTGTTTTCATCTACAGAATC | + |
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Preference number: 5 (lower is better) Translates to: FDEKAPSFCPQGIRC*LIALLTHSVFIYRI Trigger: GATTCTGTAGATGAAAACAGAATGGGTAAGAAGCGCGATAAGTCAGCATCTGATGCCCTGAGGGCAAAAAGAGGGCGCTTTCTCATCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS TCA 90 bp | TGGGAGAAGATGCAGTTTCCAAAGAGACCCAGTGTACAGTCACAATaGAATAGTCAGTGGAAGGGTCATGAGTCCATATGTCAGCAGTCA | + |
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Preference number: 5 (lower is better) Translates to: WEKMQFPKRPSVQSQ*NSQWKGHESICQQS Trigger: TGACTGCTGACATATGGACTCATGACCCTTCCACTGACTATTTCATTGTGACTGTACACTGGGTCTCTTTGGAAACTGCATCTTCTCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS GCA 90 bp | TTCCAAACTGCAGATGTCTTGGCTCTCGTTCCTGGAATTAAGGCATaGTTGACAATGTTGCTTTTGATGAGAAAGCGCCCTCTTTTTGCC | + |
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Preference number: 5 (lower is better) Translates to: FQTADVLALVPGIKA*LTMLLLMRKRPLFA Trigger: GGCAAAAAGAGGGCGCTTTCTCATCAAAAGCAACATTGTCAAGCATGCCTTAATTCCAGGAACGAGAGCCAAGACATCTGCAGTTTGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CCA 90 bp | CAATGTGTCGTCGTTTCTCTCTCTTGTGCGTGCACCGGATTATCTTaGTCTGCAACAGGAATAGGACTCTCAGATCTATTTTCAACCTCT | + |
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Preference number: 5 (lower is better) Translates to: QCVVVSLSCACTGLS*SATGIGLSDLFSTS Trigger: AGAGGTTGAAAATAGATCTGAGAGTCCTATTCCTGTTGCAGACCAAGATAATCCGGTGCACGCACAAGAGAGAGAAACGACGACACATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS TCA 90 bp | TATTTTCAACCTCTAAACAAGGGGGTTCATCTGTATCAGAGTCACTaGGGTCCTCAGCTGTTAAATCTTGGCTGCCTGATGACTTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: YFQPLNKGVHLYQSH*GPQLLNLGCLMTSL Trigger: GAGAGAAGTCATCAGGCAGCCAAGATTTAACAGCTGAGGACCTCAGTGACTCTGATACAGATGAACCCCCTTGTTTAGAGGTTGAAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS TCA 90 bp | TCAAATGGCTTAAGAATATCACAAACGTATGTCATTAGAGTCCACTaGAGGGAGGTAAGTACAACTCCACTGGCTCTGCCCAGACTATGG | + |
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Preference number: 5 (lower is better) Translates to: SNGLRISQTYVIRVH*REVSTTPLALPRLW Trigger: CCATAGTCTGGGCAGAGCCAGTGGAGTTGTACTTACCTCCCTTCAGTGGACTCTAATGACATACGTTTGTGATATTCTTAAGCCATTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS GCA 90 bp | CTCCACAATCATCTGAATAACTGCCTGACTTATTTGATTTGCGGCTaGATTTTCACAATGTGTCGTCGTTTCTCTCTCTTGTGCGTGCAC | + |
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Preference number: 5 (lower is better) Translates to: LHNHLNNCLTYLICG*IFTMCRRFSLLCVH Trigger: GTGCACGCACAAGAGAGAGAAACGACGACACATTGTGAAAATGCAGCCGCAAATCAAATAAGTCAGGCAGTTATTCAGATGATTGTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS GCA 90 bp | TGCCCACTTTCTAAAATTGGGAGTCCCACCATTACTGGGAGAAGATaGAGTTTCCAAAGAGACCCAGTGTACAGTCACAATGAAATAGTC | + |
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Preference number: 5 (lower is better) Translates to: CPLSKIGSPTITGRR*SFQRDPVYSHNEIV Trigger: GACTATTTCATTGTGACTGTACACTGGGTCTCTTTGGAAACTGCATCTTCTCCCAGTAATGGTGGGACTCCCAATTTTAGAAAGTGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS GCA 90 bp | GAAATAGTTGTACGGATGCAGATCCTCCACAATCATCTGAATAACTaGCTGACTTATTTGATTTGCGGCTGCATTTTCACAATGTGTCGT | + |
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Preference number: 5 (lower is better) Translates to: EIVVRMQILHNHLNN*LTYLICGCIFTMCR Trigger: ACGACACATTGTGAAAATGCAGCCGCAAATCAAATAAGTCAGGCAGTTATTCAGATGATTGTGGAGGATCTGCATCCGTACAACTATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS TCA 90 bp | GCCACTAACATATTCTCAATACTTTTGTGCTCACAGAAAAAGTCCTaGATCACTATATTTAGACAATGCAGGAAGCATGGCACATGGGTA | + |
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Preference number: 5 (lower is better) Translates to: ATNIFSILLCSQKKS*ITIFRQCRKHGTWV Trigger: TACCCATGTGCCATGCTTCCTGCATTGTCTAAATATAGTGATTCAGGACTTTTTCTGTGAGCACAAAAGTATTGAGAATATGTTAGTGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS GCA 90 bp | AAACTGTTCTTAAAACAAGGATCTAACAAAGTAGCCAAGATACAATaGTTGGATTTGAGCATGGCACTTAGTAAGGCATCACTTTCAAGT | + |
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Preference number: 5 (lower is better) Translates to: KLFLKQGSNKVAKIQ*LDLSMALSKASLSS Trigger: ACTTGAAAGTGATGCCTTACTAAGTGCCATGCTCAAATCCAAGCATTGTATCTTGGCTACTTTGTTAGATCCTTGTTTTAAGAACAGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS TCA 72 bp | GGAGCTTTTGCTCCCAACAGCAACACTGCCTGCGGCTaGGCTATCCAGAGAACCTGCACTGGAGGTGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: GAFAPNSNTACG*AIQRTCTGGAF Trigger: GAAGGCACCTCCAGTGCAGGTTCTCTGGATAGCTCAGCCGCAGGCAGTGTTGCTGTTGGGAGCAAAAGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 72 bp | GGATGGGATGCGTGGCCTGAAGATGTCGTTGAAGTGTaGAAGTTCCTAAGTGGGAACCTGGCCTACCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: GWDAWPEDVVEV*KFLSGNLAYPG Trigger: GCCGGGGTAGGCCAGGTTCCCACTTAGGAACTTCAACACTTCAACGACATCTTCAGGCCACGCATCCCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 90 bp | CAGCCCAATGGATGGGATGCGTGGCCTGAAGATGTCGTTGAAGTGTaGAAGTTCCTAAGTGGGAACCTGGCCTACCCCGGCTCACACTTC | + |
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Preference number: 6 (lower is better) Translates to: QPNGWDAWPEDVVEV*KFLSGNLAYPGSHF Trigger: GAAGTGTGAGCCGGGGTAGGCCAGGTTCCCACTTAGGAACTTCAACACTTCAACGACATCTTCAGGCCACGCATCCCATCCATTGGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 90 bp | AAGTACTCATCTACTACTGCTACCGCAGCGGGGAGCAAGGAGCTTTaGCTCCCAACAGCAACACTGCCTGCGGCTGAGCTATCCAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: KYSSTTATAAGSKEL*LPTATLPAAELSRE Trigger: TTCTCTGGATAGCTCAGCCGCAGGCAGTGTTGCTGTTGGGAGCAAAAGCTCCTTGCTCCCCGCTGCGGTAGCAGTAGTAGATGAGTACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 90 bp | GTTGGCCCTGGTCCAGTGAGGAGAATGCCTTGCCTGAAGATGTCTTaGAAGAGTAGATGTACCAAGATGGCTGCCTGGCTTACCCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: VGPGPVRRMPCLKMS*KSRCTKMAAWLTPA Trigger: AGCAGGGGTAAGCCAGGCAGCCATCTTGGTACATCTACTCTTCAAAGACATCTTCAGGCAAGGCATTCTCCTCACTGGACCAGGGCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 72 bp | GTCTCATCTAATCCGTTTCCAATAGCACCACTGTCTTaGTTGGCAACAGCCCAATGGATGGGATGCGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: VSSNPFPIAPLS*LATAQWMGCVA Trigger: GGCCACGCATCCCATCCATTGGGCTGTTGCCAACAAAGACAGTGGTGCTATTGGAAACGGATTAGATGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 72 bp | GATGGTGGATTAGGGGTAGCACCTGATTCAATCCTGTaGTCTTCACACTCACTCTCTGGGTGGCCTCCTCAA | + |
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Preference number: 6 (lower is better) Translates to: DGGLGVAPDSIL*SSHSLSGWPPQ Trigger: TTGAGGAGGCCACCCAGAGAGTGAGTGTGAAGACAACAGGATTGAATCAGGTGCTACCCCTAATCCACCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 72 bp | GGGTCATCACCTCCTGAGAGCTCTGAATACTTCTCTTaGAAGTACTCATCTACTACTGCTACCGCAGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: GSSPPESSEYFS*KYSSTTATAAG Trigger: CCCCGCTGCGGTAGCAGTAGTAGATGAGTACTTCAAAGAGAAGTATTCAGAGCTCTCAGGAGGTGATGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS TCA 72 bp | GGTCATCACCTCCTGAGAGCTCTGAATACTTCTCTTTaGAGTACTCATCTACTACTGCTACCGCAGCGGGGA | + |
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Preference number: 6 (lower is better) Translates to: GHHLLRALNTSL*STHLLLLPQRG Trigger: TCCCCGCTGCGGTAGCAGTAGTAGATGAGTACTTCAAAGAGAAGTATTCAGAGCTCTCAGGAGGTGATGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 72 bp | GGTCCAGTGAGGAGAATGCCTTGCCTGAAGATGTCTTaGAAGAGTAGATGTACCAAGATGGCTGCCTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: GPVRRMPCLKMS*KSRCTKMAAWL Trigger: AAGCCAGGCAGCCATCTTGGTACATCTACTCTTCAAAGACATCTTCAGGCAAGGCATTCTCCTCACTGGACC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 72 bp | GGCTGCATTTTCACAATGTGTCGTCGTTTCTCTCTCTaGTGCGTGCACCGGATTATCTTGGTCTGCAACAGG | + |
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Preference number: 6 (lower is better) Translates to: GCIFTMCRRFSL*CVHRIILVCNR Trigger: CCTGTTGCAGACCAAGATAATCCGGTGCACGCACAAGAGAGAGAAACGACGACACATTGTGAAAATGCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS TCA 72 bp | AGGGAAAAGAGGAGATGGTGGATTAGGGGTAGCACCTaGTTCAATCCTGTTGTCTTCACACTCACTCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: REKRRWWIRGST*FNPVVFTLTLW Trigger: CCAGAGAGTGAGTGTGAAGACAACAGGATTGAATCAGGTGCTACCCCTAATCCACCATCTCCTCTTTTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS TCA 72 bp | TCAGATTGCCAACTACACATGGGGCAACTCAGATACTaGATGGCAACTTGGGTCAAAGCTGGCCATATGCTC | + |
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Preference number: 6 (lower is better) Translates to: SDCQLHMGQLRY*MATWVKAGHML Trigger: GAGCATATGGCCAGCTTTGACCCAAGTTGCCATTCAGTATCTGAGTTGCCCCATGTGTAGTTGGCAATCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS GCA 72 bp | AAACGCACCCCAGAATCCCAGCATCACCAAAAGTACTaGATCTTCTGCCAGGAGAGATTGAGGAAACTGGTA | + |
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Preference number: 6 (lower is better) Translates to: KRTPESQHHQKY*IFCQERLRKLV Trigger: TACCAGTTTCCTCAATCTCTCCTGGCAGAAGATGCAGTACTTTTGGTGATGCTGGGATTCTGGGGTGCGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS GCA 72 bp | GATACTGAATGGCAACTTGGGTCAAAGCTGGCCATATaGTCACCTTCCTCTGCCAGTAAACCAAAGGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: DTEWQLGSKLAI*SPSSASKPKGH Trigger: ATGACCCTTTGGTTTACTGGCAGAGGAAGGTGAGCATATGGCCAGCTTTGACCCAAGTTGCCATTCAGTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CCA 72 bp | TGTCTTTGTTGGCAACAGCCCAATGGATGGGATGCGTaGCCTGAAGATGTCGTTGAAGTGTTGAAGTTCCTA | + |
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Preference number: 6 (lower is better) Translates to: CLCWQQPNGWDA*PEDVVEVLKFL Trigger: TAGGAACTTCAACACTTCAACGACATCTTCAGGCCACGCATCCCATCCATTGGGCTGTTGCCAACAAAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CCA 72 bp | ATTGCCAACTACACATGGGGCAACTCAGATACTGAATaGCAACTTGGGTCAAAGCTGGCCATATGCTCACCT | + |
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Preference number: 6 (lower is better) Translates to: IANYTWGNSDTE*QLGSKLAICSP Trigger: AGGTGAGCATATGGCCAGCTTTGACCCAAGTTGCCATTCAGTATCTGAGTTGCCCCATGTGTAGTTGGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 90 bp | CAAACTGCAGATGTCTTGGCTCTCGTTCCTGGAATTAAGGCATGCTaGACAATGTTGCTTTTGATGAGAAAGCGCCCTCTTTTTGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: QTADVLALVPGIKAC*TMLLLMRKRPLFAL Trigger: GAGGGCAAAAAGAGGGCGCTTTCTCATCAAAAGCAACATTGTCAAGCATGCCTTAATTCCAGGAACGAGAGCCAAGACATCTGCAGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 90 bp | TTGATTTGCGGCTGCATTTTCACAATGTGTCGTCGTTTCTCTCTCTaGTGCGTGCACCGGATTATCTTGGTCTGCAACAGGAATAGGACT | + |
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Preference number: 6 (lower is better) Translates to: LICGCIFTMCRRFSL*CVHRIILVCNRNRT Trigger: AGTCCTATTCCTGTTGCAGACCAAGATAATCCGGTGCACGCACAAGAGAGAGAAACGACGACACATTGTGAAAATGCAGCCGCAAATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS TCA 72 bp | CATCTTTCCCTCTACCACATCGTCTTCGTCTGTGTTTaGATTAATGGAAACGCACCCCAGAATCCCAGCATC | + |
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Preference number: 6 (lower is better) Translates to: HLSLYHIVFVCV*INGNAPQNPSI Trigger: GATGCTGGGATTCTGGGGTGCGTTTCCATTAATTCAAACACAGACGAAGACGATGTGGTAGAGGGAAAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS GCA 72 bp | AAACTTGTTGGCCCTGGTCCAGTGAGGAGAATGCCTTaGCTGAAGATGTCTTTGAAGAGTAGATGTACCAAG | + |
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Preference number: 6 (lower is better) Translates to: KLVGPGPVRRMP*LKMSLKSRCTK Trigger: CTTGGTACATCTACTCTTCAAAGACATCTTCAGGCAAGGCATTCTCCTCACTGGACCAGGGCCAACAAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 72 bp | CGTCGTTTCTCTCTCTTGTGCGTGCACCGGATTATCTaGGTCTGCAACAGGAATAGGACTCTCAGATCTATT | + |
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Preference number: 6 (lower is better) Translates to: RRFSLLCVHRII*VCNRNRTLRSI Trigger: AATAGATCTGAGAGTCCTATTCCTGTTGCAGACCAAGATAATCCGGTGCACGCACAAGAGAGAGAAACGACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 72 bp | GTCCACCAGATTGAGGGCCTGAGTAATACCTCTGACTaGAAAATCTTCTCTGAGTCTCTGCAGGGAAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: VHQIEGLSNTSD*KIFSESLQGKE Trigger: CTCTTTTCCCTGCAGAGACTCAGAGAAGATTTTCAAGTCAGAGGTATTACTCAGGCCCTCAATCTGGTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 90 bp | ACAATGTGTCGTCGTTTCTCTCTCTTGTGCGTGCACCGGATTATCTaGGTCTGCAACAGGAATAGGACTCTCAGATCTATTTTCAACCTC | + |
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Preference number: 6 (lower is better) Translates to: TMCRRFSLLCVHRII*VCNRNRTLRSIFNL Trigger: GAGGTTGAAAATAGATCTGAGAGTCCTATTCCTGTTGCAGACCAAGATAATCCGGTGCACGCACAAGAGAGAGAAACGACGACACATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CCA 72 bp | GTCGTTTCTCTCTCTTGTGCGTGCACCGGATTATCTTaGTCTGCAACAGGAATAGGACTCTCAGATCTATTT | + |
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Preference number: 6 (lower is better) Translates to: VVSLSCACTGLS*SATGIGLSDLF Trigger: AAATAGATCTGAGAGTCCTATTCCTGTTGCAGACCAAGATAATCCGGTGCACGCACAAGAGAGAGAAACGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 72 bp | GAGCGACAATCTGTAGAAACCTTTGAAAGGCTGGGGTaGAGAAATAGTTGTACGGATGCAGATCCTCCACAA | + |
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Preference number: 6 (lower is better) Translates to: ERQSVETFERLG*RNSCTDADPPQ Trigger: TTGTGGAGGATCTGCATCCGTACAACTATTTCTCAACCCCAGCCTTTCAAAGGTTTCTACAGATTGTCGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS TCA 72 bp | TTACAAATTGCTCTCCAGGTATATTGGGGGTCAACATaGAAGAAGTGCCACACAATGGAGGTTTTGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LQIALQVYWGST*KKCHTMEVLAL Trigger: CAGAGCCAAAACCTCCATTGTGTGGCACTTCTTTCATGTTGACCCCCAATATACCTGGAGAGCAATTTGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS TCA 72 bp | TGTAGTATCTGGCGGGCTTTGACAGAATGGCTAAAATaGTGGCAGGTTTTCCTAGCAGCCACTAACATATTC | + |
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Preference number: 6 (lower is better) Translates to: CSIWRALTEWLK*WQVFLAATNIF Trigger: GAATATGTTAGTGGCTGCTAGGAAAACCTGCCATCATTTTAGCCATTCTGTCAAAGCCCGCCAGATACTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS TCA 72 bp | GTTTCATCCTGCTTCAGATTCTTCCATGGAAGCTGGTaGTCATTTTGGAATTCTTGTAGTATCTGGCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: VSSCFRFFHGSW*SFWNSCSIWRA Trigger: AGCCCGCCAGATACTACAAGAATTCCAAAATGATCACCAGCTTCCATGGAAGAATCTGAAGCAGGATGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS TCA 72 bp | TTAAGAATATCACAAACGTATGTCATTAGAGTCCACTaGAGGGAGGTAAGTACAACTCCACTGGCTCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: LRISQTYVIRVH*REVSTTPLALP Trigger: GGGCAGAGCCAGTGGAGTTGTACTTACCTCCCTTCAGTGGACTCTAATGACATACGTTTGTGATATTCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS GCA 72 bp | ACTTCTCTCCAGGCATCGTATCATTCAGGAGATCACTaGTCTCTGTTTCAGTCTCATCTAATCCGTTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: TSLQASYHSGDH*SLFQSHLIRFQ Trigger: TTGGAAACGGATTAGATGAGACTGAAACAGAGAGCAGTGATCTCCTGAATGATACGATGCCTGGAGAGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS GCA 72 bp | TTCTCTCTCTTGTGCGTGCACCGGATTATCTTGGTCTaGAACAGGAATAGGACTCTCAGATCTATTTTCAAC | + |
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Preference number: 6 (lower is better) Translates to: FSLLCVHRIILV*NRNRTLRSIFN Trigger: GTTGAAAATAGATCTGAGAGTCCTATTCCTGTTGCAGACCAAGATAATCCGGTGCACGCACAAGAGAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS GCA 72 bp | TCTAAAATTGGGAGTCCCACCATTACTGGGAGAAGATaGAGTTTCCAAAGAGACCCAGTGTACAGTCACAAT | + |
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Preference number: 6 (lower is better) Translates to: SKIGSPTITGRR*SFQRDPVYSHN Trigger: ATTGTGACTGTACACTGGGTCTCTTTGGAAACTGCATCTTCTCCCAGTAATGGTGGGACTCCCAATTTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 72 bp | TGCAGGAAGCATGGCACATGGGTAAAGCCACCACCTTaGATTGCATGTACCACATTAGAAGAATTGTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: CRKHGTWVKPPP*IACTTLEELSE Trigger: TTCTGACAATTCTTCTAATGTGGTACATGCAATCAAAGGTGGTGGCTTTACCCATGTGCCATGCTTCCTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 90 bp | TATAGTCAGGAGCGACAATCTGTAGAAACCTTTGAAAGGCTGGGGTaGAGAAATAGTTGTACGGATGCAGATCCTCCACAATCATCTGAA | + |
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Preference number: 6 (lower is better) Translates to: YSQERQSVETFERLG*RNSCTDADPPQSSE Trigger: TTCAGATGATTGTGGAGGATCTGCATCCGTACAACTATTTCTCAACCCCAGCCTTTCAAAGGTTTCTACAGATTGTCGCTCCTGACTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 90 bp | TCTTTGGCTAAACCTGTAACACAAAGTACTGCCCACTTTCTAAAATaGGGAGTCCCACCATTACTGGGAGAAGATGCAGTTTCCAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: SLAKPVTQSTAHFLK*GVPPLLGEDAVSKE Trigger: CTCTTTGGAAACTGCATCTTCTCCCAGTAATGGTGGGACTCCCAATTTTAGAAAGTGGGCAGTACTTTGTGTTACAGGTTTAGCCAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 90 bp | CTGCTTTGGATGAAAGTGGCTATTTGTGGTAAACATGCATTCAGATaGCCAACTACACATGGGGCAACTCAGATACTGAATGGCAACTTG | + |
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Preference number: 6 (lower is better) Translates to: LLWMKVAICGKHAFR*PTTHGATQILNGNL Trigger: CAAGTTGCCATTCAGTATCTGAGTTGCCCCATGTGTAGTTGGCAATCTGAATGCATGTTTACCACAAATAGCCACTTTCATCCAAAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS TCA 72 bp | ATGCAGTTTCCAAAGAGACCCAGTGTACAGTCACAATaGAATAGTCAGTGGAAGGGTCATGAGTCCATATGT | + |
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Preference number: 6 (lower is better) Translates to: MQFPKRPSVQSQ*NSQWKGHESIC Trigger: ACATATGGACTCATGACCCTTCCACTGACTATTTCATTGTGACTGTACACTGGGTCTCTTTGGAAACTGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS GCA 72 bp | GTACGGATGCAGATCCTCCACAATCATCTGAATAACTaGCTGACTTATTTGATTTGCGGCTGCATTTTCACA | + |
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Preference number: 6 (lower is better) Translates to: VRMQILHNHLNN*LTYLICGCIFT Trigger: TGTGAAAATGCAGCCGCAAATCAAATAAGTCAGGCAGTTATTCAGATGATTGTGGAGGATCTGCATCCGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CCA 72 bp | ATCACTATATTTAGACAATGCAGGAAGCATGGCACATaGGTAAAGCCACCACCTTTGATTGCATGTACCACA | + |
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Preference number: 6 (lower is better) Translates to: ITIFRQCRKHGT*VKPPPLIACTT Trigger: TGTGGTACATGCAATCAAAGGTGGTGGCTTTACCCATGTGCCATGCTTCCTGCATTGTCTAAATATAGTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 72 bp | AAACCTGTAACACAAAGTACTGCCCACTTTCTAAAATaGGGAGTCCCACCATTACTGGGAGAAGATGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: KPVTQSTAHFLK*GVPPLLGEDAV Trigger: AACTGCATCTTCTCCCAGTAATGGTGGGACTCCCAATTTTAGAAAGTGGGCAGTACTTTGTGTTACAGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS GCA 72 bp | CATCTGAATAACTGCCTGACTTATTTGATTTGCGGCTaGATTTTCACAATGTGTCGTCGTTTCTCTCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: HLNNCLTYLICG*IFTMCRRFSLL Trigger: CAAGAGAGAGAAACGACGACACATTGTGAAAATGCAGCCGCAAATCAAATAAGTCAGGCAGTTATTCAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 72 bp | TTTTTCACACAGGTTACAAATTGCTCTCCAGGTATATaGGGGGTCAACATGAAAGAAGTGCCACACAATGGA | + |
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Preference number: 6 (lower is better) Translates to: FFTQVTNCSPGI*GVNMKEVPHNG Trigger: TCCATTGTGTGGCACTTCTTTCATGTTGACCCCCAATATACCTGGAGAGCAATTTGTAACCTGTGTGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 72 bp | TCTACAGAATCAGTAGGAATATACTCAAAGCTTCCATaGCTTCCAGGAGAAGGAGGAGACAACGATAAATCC | + |
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Preference number: 6 (lower is better) Translates to: STESVGIYSKLP*LPGEGGDNDKS Trigger: GGATTTATCGTTGTCTCCTCCTTCTCCTGGAAGCAATGGAAGCTTTGAGTATATTCCTACTGATTCTGTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 90 bp | TGGGTAAAGCCACCACCTTTGATTGCATGTACCACATTAGAAGAATaGTCAGAAACAATGAAGCTAGGGGTAAGGAAATTAGGAGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: WVKPPPLIACTTLEE*SETMKLGVRKLGES Trigger: GCTTTCTCCTAATTTCCTTACCCCTAGCTTCATTGTTTCTGACAATTCTTCTAATGTGGTACATGCAATCAAAGGTGGTGGCTTTACCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 90 bp | TTTAGACAATGCAGGAAGCATGGCACATGGGTAAAGCCACCACCTTaGATTGCATGTACCACATTAGAAGAATTGTCAGAAACAATGAAG | + |
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Preference number: 6 (lower is better) Translates to: FRQCRKHGTWVKPPP*IACTTLEELSETMK Trigger: CTTCATTGTTTCTGACAATTCTTCTAATGTGGTACATGCAATCAAAGGTGGTGGCTTTACCCATGTGCCATGCTTCCTGCATTGTCTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS GCA 72 bp | CACAATCATCTGAATAACTGCCTGACTTATTTGATTTaGGGCTGCATTTTCACAATGTGTCGTCGTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: HNHLNNCLTYLI*GCIFTMCRRFS Trigger: AGAGAAACGACGACACATTGTGAAAATGCAGCCGCAAATCAAATAAGTCAGGCAGTTATTCAGATGATTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 72 bp | CCACCACCTTTGATTGCATGTACCACATTAGAAGAATaGTCAGAAACAATGAAGCTAGGGGTAAGGAAATTA | + |
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Preference number: 6 (lower is better) Translates to: PPPLIACTTLEE*SETMKLGVRKL Trigger: TAATTTCCTTACCCCTAGCTTCATTGTTTCTGACAATTCTTCTAATGTGGTACATGCAATCAAAGGTGGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CAA 90 bp | CTGTTCTTAAAACAAGGATCTAACAAAGTAGCCAAGATACAATGCTaGGATTTGAGCATGGCACTTAGTAAGGCATCACTTTCAAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: LFLKQGSNKVAKIQC*DLSMALSKASLSSF Trigger: GAAACTTGAAAGTGATGCCTTACTAAGTGCCATGCTCAAATCCAAGCATTGTATCTTGGCTACTTTGTTAGATCCTTGTTTTAAGAACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS GCA 72 bp | TTAAAACAAGGATCTAACAAAGTAGCCAAGATACAATaGTTGGATTTGAGCATGGCACTTAGTAAGGCATCA | + |
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Preference number: 6 (lower is better) Translates to: LKQGSNKVAKIQ*LDLSMALSKAS Trigger: TGATGCCTTACTAAGTGCCATGCTCAAATCCAAGCATTGTATCTTGGCTACTTTGTTAGATCCTTGTTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS TCA 72 bp | ATATTCTCAATACTTTTGTGCTCACAGAAAAAGTCCTaGATCACTATATTTAGACAATGCAGGAAGCATGGC | + |
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Preference number: 6 (lower is better) Translates to: IFSILLCSQKKS*ITIFRQCRKHG Trigger: GCCATGCTTCCTGCATTGTCTAAATATAGTGATTCAGGACTTTTTCTGTGAGCACAAAAGTATTGAGAATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS TCA 72 bp | ATATTATCAAAGTCCATGTTCATGATCTGCTTTGGATaGAAGTGGCTATTTGTGGTAAACATGCATTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: ILSKSMFMICFG*KWLFVVNMHSD Trigger: ATCTGAATGCATGTTTACCACAAATAGCCACTTTCATCCAAAGCAGATCATGAACATGGACTTTGATAATAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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| CDS CCA 72 bp | TTCTATATTATCAAAGTCCATGTTCATGATCTGCTTTaGATGAAAGTGGCTATTTGTGGTAAACATGCATTC | + |
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Preference number: 6 (lower is better) Translates to: FYIIKVHVHDLL*MKVAICGKHAF Trigger: GAATGCATGTTTACCACAAATAGCCACTTTCATCCAAAGCAGATCATGAACATGGACTTTGATAATATAGAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179598.4 |
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