Pregenerated sensors for ZBED5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034173Ensembl transcript IDs: ENSMUST00000041466.14, ENSMUST00000077320.3
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTAGGCTGAGCTGCAGGTaGTCTTCGGGGAGCAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTRLSCR*SSGSSP Trigger: AGGGCTGCTCCCCGAAGAGCACCTGCAGCTCAGCCT...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR GCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTTGCTGGAGGCTGAGCTaGAGGTGCTCTTCGGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTCWRLS*RCSSGS Trigger: GCTCCCCGAAGAGCACCTGCAGCTCAGCCTCCAGCA...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR GCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTTGCAGATGGCGCAGCTaGTGCTGGAGGCTGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTCRWRS*CWRLSC Trigger: GCAGCTCAGCCTCCAGCAGCAGCTGCGCCATCTGCA...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR TCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTACGTTCCTCTCTCCATaGTCCACTGGCCTGGGATGG | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTTFLSP*STGLGW Trigger: CCATCCCAGGCCAGTGGATCATGGAGAGAGGAACGT...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR CCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTTCCACTGGCCTGGGATaGTCCACATTTGCAATCCTG | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTSTGLG*STFAIL Trigger: CAGGATTGCAAATGTGGACCATCCCAGGCCAGTGGA...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR TCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTCAGGTCTGGCTTTCTTaGGTCCATCAGCTTTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTQVWLS*VHQLCF Trigger: GAAGCAAAGCTGATGGACTCAAGAAAGCCAGACCTG...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR CCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTCATGATCCACTGGCCTaGGATGGTCCACATTTGCAA | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTHDPLA*DGPHLQ Trigger: TTGCAAATGTGGACCATCCCAGGCCAGTGGATCATG...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR GCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTTCTGTTTGTTGGACTTaGTGCCAGTATCAGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTSVCWT*CQYQVW Trigger: CCAGACCTGATACTGGCAGCAAGTCCAACAAACAGA...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR GCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTTGCTCTGCAAAGGTGTaGGGTTTCATATCTCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTCSAKV*GFISLA Trigger: TGCCAGAGATATGAAACCGCACACCTTTGCAGAGCA...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR CCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTCTTTTCATTACTTCCTaGAAGTCTTGGGGCAGCGTC | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTLFITS*KSWGSV Trigger: GACGCTGCCCCAAGACTTCCAGGAAGTAATGAAAAG...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR CCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTCCAGAACTGTGTGACTaGCATTGTGGAGAAATCAGC | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTPELCD*HCGEIS Trigger: GCTGATTTCTCCACAATGCCAGTCACACAGTTCTGG...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR TCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTATTTCCTGGACCACCTaGTCAAGAATATCAGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTISWTT*SRISAD Trigger: GTCTGCTGATATTCTTGATCAGGTGGTCCAGGAAAT...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR TCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTCATCTCCCTTCAGTATaGAGTAGCAGGGTTTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTHLPSV*SSRVLL Trigger: AAGCAAAACCCTGCTACTTCATACTGAAGGGAGATG...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR GCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTAAATCACTGCAGAGCTaGAGAAACAGTCGACTGTTC | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTKSLQS*RNSRLF Trigger: GAACAGTCGACTGTTTCTGCAGCTCTGCAGTGATTT...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR GCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTAGAACTGGGTATGACTaGAAACACTTGACCCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTRTGYD*KHLTQN Trigger: GTTCTGGGTCAAGTGTTTGCAGTCATACCCAGTTCT...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR CCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTACACAGATATGTTGTTaGAAAAGGAAGGAGGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTTQICC*KRKEEA Trigger: CGCCTCCTCCTTCCTTTTCCAACAACATATCTGTGT...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR TCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTCATCAGCTTTGCTTCTaGAATAGTTGGTATCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTHQLCF*NSWYPC Trigger: GCAAGGATACCAACTATTTCAGAAGCAAAGCTGATG...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR GCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTCCAGGAAATTTCACTTaGAAGCATGTCCAAGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTPGNFT*KHVQVF Trigger: GAACACTTGGACATGCTTGCAAGTGAAATTTCCTGG...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR CCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTTGCTTGCTCTCAAAATaGCGTTTCAGTTTGTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTCLLSK*RFSLLG Trigger: ACCCAACAAACTGAAACGCCATTTTGAGAGCAAGCA...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR GCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTTGCAAACTCCACAGATaGTTTTCCAAGAGATCTCAT | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTCKLHR*FSKRSH Trigger: ATGAGATCTCTTGGAAAAGCATCTGTGGAGTTTGCA...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR GCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTAGCTACCTTCTGCAATaGACTGTTATCACTGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTSYLLQ*TVITEK Trigger: CTTTTCAGTGATAACAGTGCATTGCAGAAGGTAGCT...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR CCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTACAAATGACACACTGTaGTCTCTCAATTCCTACTGT | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTTNDTL*SLNSYC Trigger: ACAGTAGGAATTGAGAGACCACAGTGTGTCATTTGT...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR CCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTGCTGCATATTGGAAGTaGAGCAGATTTAATTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTAAYWK*SRFNFL Trigger: CAGGAAATTAAATCTGCTCCACTTCCAATATGCAGC...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR CCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTCTGGATGCTGCATATTaGAAGTGGAGCAGATTTAAT | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTLDAAY*KWSRFN Trigger: ATTAAATCTGCTCCACTTCCAATATGCAGCATCCAG...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR GCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTTCCTTTCAAGAGGTTTaGAGCAAAGAAACTCATCTT | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTSFQEV*SKETHL Trigger: AAGATGAGTTTCTTTGCTGCAAACCTCTTGAAAGGA...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR GCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTACTGTAATCCTTTTGTaGTGTTCAATGTCATGTTCC | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTTVILL*CSMSCS Trigger: GGAACATGACATTGAACAGCACAAAAGGATTACAGT...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR CCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTTTCATTTGGAATGAGTaGATCTTTTCAGACAGATCC | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTFIWNE*IFSDRS Trigger: GGATCTGTCTGAAAAGATCCACTCATTCCAAATGAA...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR GCA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTGTTGAATTTGGTCCTTaGAGTGATAAATTCAACTCA | + |
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Preference number: 4 (lower is better) Translates to: FITNYKHMRFCLEARCGTVEFGP*SDKFNS Trigger: TGAGTTGAATTTATCACTGCAAGGACCAAATTCAAC...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS GCA 90 bp | GGAAGGAGGAGGCGCAACACCATCTCTGACAGAACTGGGTATGACTaGAAACACTTGACCCAGAACTGTGTGACTGGCATTGTGGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: GRRRRNTISDRTGYD*KHLTQNCVTGIVEK Trigger: TTTCTCCACAATGCCAGTCACACAGTTCTGGGTCAAGTGTTTGCAGTCATACCCAGTTCTGTCAGAGATGGTGTTGCGCCTCCTCCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS TCA 90 bp | GTAAGTGCTCTGCAAAGGTGTGCGGTTTCATATCTCTGGCAATTCTaGGGGCCACCAAATAGGAAGTTTCCACGGCTGCCACGTTCTGTT | + |
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Preference number: 5 (lower is better) Translates to: VSALQRCAVSYLWQF*GPPNRKFPRLPRSV Trigger: AACAGAACGTGGCAGCCGTGGAAACTTCCTATTTGGTGGCCCTCAGAATTGCCAGAGATATGAAACCGCACACCTTTGCAGAGCACTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS GCA 90 bp | TCCCTCTTGACAGCCATCTCCCTTCAGTATGAAGTAGCAGGGTTTTaGTTGGCTCATCTAAATCACTGCAGAGCTGCAGAAACAGTCGAC | + |
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Preference number: 5 (lower is better) Translates to: SLLTAISLQYEVAGF*LAHLNHCRAAETVD Trigger: GTCGACTGTTTCTGCAGCTCTGCAGTGATTTAGATGAGCCAAGCAAAACCCTGCTACTTCATACTGAAGGGAGATGGCTGTCAAGAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS GCA 90 bp | GATGCTTTTCCAAGAGATCTCATGCTGTCTCAGAAACGAGTCGACTaGCTCAAATACATCAAGGGCAGTAGCTGTCCTTTCAAGAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: DAFPRDLMLSQKRVD*LKYIKGSSCPFKRF Trigger: AAACCTCTTGAAAGGACAGCTACTGCCCTTGATGTATTTGAGGCAGTCGACTCGTTTCTGAGACAGCATGAGATCTCTTGGAAAAGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS TCA 90 bp | ATACGTTTTAGAACTTTCCCTCTTGACAGCCATCTCCCTTCAGTATaGAGTAGCAGGGTTTTGCTTGGCTCATCTAAATCACTGCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: IRFRTFPLDSHLPSV*SSRVLLGSSKSLQS Trigger: GCTCTGCAGTGATTTAGATGAGCCAAGCAAAACCCTGCTACTTCATACTGAAGGGAGATGGCTGTCAAGAGGGAAAGTTCTAAAACGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS CCA 90 bp | ACAGTTTGCAACGTCTGTCGATTCATCGAGCTGGATGCTGCATATTaGAAGTGGAGCAGATTTAATTTCCTGGACCACCTGATCAAGAAT | + |
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Preference number: 5 (lower is better) Translates to: TVCNVCRFIELDAAY*KWSRFNFLDHLIKN Trigger: ATTCTTGATCAGGTGGTCCAGGAAATTAAATCTGCTCCACTTCCAATATGCAGCATCCAGCTCGATGAATCGACAGACGTTGCAAACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS CCA 90 bp | TCTTCATTGCTAATGTTTGCAGATGAAGCATACAATGAGCTCCAATaGCTTTTGGGGACTCATTTAGGACCAGGCGCTGAAACCCAGATT | + |
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Preference number: 5 (lower is better) Translates to: SSLLMFADEAYNELQ*LLGTHLGPGAETQI Trigger: AATCTGGGTTTCAGCGCCTGGTCCTAAATGAGTCCCCAAAAGCCATTGGAGCTCATTGTATGCTTCATCTGCAAACATTAGCAATGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR CAA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTTACTTCCTGGAAGTCTaGGGGCAGCGTCTTCATTGC | + |
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Preference number: 5 (lower is better) Translates to: FITNYKHMRFCLEARCGTYFLEV*GQRLHC Trigger: GCAATGAAGACGCTGCCCCAAGACTTCCAGGAAGTA...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS TCA 90 bp | ATGCTGCATATTGGAAGTGGAGCAGATTTAATTTCCTGGACCACCTaGTCAAGAATATCAGCAGACATGTCATGTATTCTTCTTCGGACA | + |
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Preference number: 5 (lower is better) Translates to: MLHIGSGADLISWTT*SRISADMSCILLRT Trigger: TGTCCGAAGAAGAATACATGACATGTCTGCTGATATTCTTGATCAGGTGGTCCAGGAAATTAAATCTGCTCCACTTCCAATATGCAGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR CAA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTGAGCTCCAATGGCTTTaGGGGACTCATTTAGGACCA | + |
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Preference number: 5 (lower is better) Translates to: FITNYKHMRFCLEARCGTELQWL*GTHLGP Trigger: TGGTCCTAAATGAGTCCCCAAAAGCCATTGGAGCTC...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS GCA 90 bp | GAGTGGATCTTTTCAGACAGATCCAGGCAGGTTGAATTTGGTCCTTaGAGTGATAAATTCAACTCATTCAAAATGGTAAAGATATCGACC | + |
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Preference number: 5 (lower is better) Translates to: EWIFSDRSRQVEFGP*SDKFNSFKMVKIST Trigger: GGTCGATATCTTTACCATTTTGAATGAGTTGAATTTATCACTGCAAGGACCAAATTCAACCTGCCTGGATCTGTCTGAAAAGATCCACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR CAA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTTCAGGTCTGGCTTTCTaGAGTCCATCAGCTTTGCTT | + |
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Preference number: 5 (lower is better) Translates to: FITNYKHMRFCLEARCGTSGLAF*SPSALL Trigger: AAGCAAAGCTGATGGACTCAAGAAAGCCAGACCTGA...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR CAA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTGGGGCAGCGTCTTCATaGCTAATGTTTGCAGATGAA | + |
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Preference number: 5 (lower is better) Translates to: FITNYKHMRFCLEARCGTGAASS*LMFADE Trigger: TTCATCTGCAAACATTAGCAATGAAGACGCTGCCCC...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR CAA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTGTAGCAGGGTTTTGCTaGGCTCATCTAAATCACTGC | + |
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Preference number: 5 (lower is better) Translates to: FITNYKHMRFCLEARCGTVAGFC*AHLNHC Trigger: GCAGTGATTTAGATGAGCCAAGCAAAACCCTGCTAC...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR CAA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTTTAGAACTTTCCCTCTaGACAGCCATCTCCCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: FITNYKHMRFCLEARCGTLELSL*TAISLQ Trigger: CTGAAGGGAGATGGCTGTCAAGAGGGAAAGTTCTAA...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR CAA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTGTCCTTTCAAGAGGTTaGCAGCAAAGAAACTCATCT | + |
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Preference number: 5 (lower is better) Translates to: FITNYKHMRFCLEARCGTVLSRG*QQRNSS Trigger: AGATGAGTTTCTTTGCTGCAAACCTCTTGAAAGGAC...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR CAA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTACCAGGAAATTTCACTaGCAAGCATGTCCAAGTGTT | + |
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Preference number: 5 (lower is better) Translates to: FITNYKHMRFCLEARCGTTRKFH*QACPSV Trigger: AACACTTGGACATGCTTGCAAGTGAAATTTCCTGGT...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR CAA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTGAATCTCGGGTAGATTaGGAAAGTACCAGGAAATTT | + |
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Preference number: 5 (lower is better) Translates to: FITNYKHMRFCLEARCGTESRVD*ESTRKF Trigger: AAATTTCCTGGTACTTTCCAAATCTACCCGAGATTC...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS-3UTR CAA 90 bp | TTTATTACTAATTACAAACACATGAGATTTTGTCTTGAAGCACGGTGTGGCACTTTTCACACAGATATGTaGTTGGAAAAGGAAGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: FITNYKHMRFCLEARCGTFHTDM*LEKEGG Trigger: TCCTCCTTCCTTTTCCAACAACATATCTGTGTGAAA...AGTGCCACACCGTGCTTCAAGACAAAATCTCATGTGTTTGTAATTAGTAATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS GCA 72 bp | CTCTCCATGATCCACTGGCCTGGGATGGTCCACATTTaGAATCCTGCACTGCCGCAGCACCTCGTTGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: LSMIHWPGMVHI*NPALPQHLVEA Trigger: GGCTTCAACGAGGTGCTGCGGCAGTGCAGGATTGCAAATGTGGACCATCCCAGGCCAGTGGATCATGGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041466.14 ENSMUST00000077320.3 |
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| CDS GCA 72 bp | ACGCGAACCCTGTCCTTGGCCACCGGGAACAGTAAGTaGTCTGCAAAGGTGTGCGGTTTCATATCTCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: TRTLSLATGNSK*SAKVCGFISLA Trigger: TGCCAGAGATATGAAACCGCACACCTTTGCAGAGCACTTACTGTTCCCGGTGGCCAAGGACAGGGTTCGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS CAA 72 bp | GGCATTGTGGAGAAATCAGCTCTCGCCGCGTCGCTGTaGGTAAGTCTGGTGAAATCTTCTTGCGCAGTCTCG | + |
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Preference number: 6 (lower is better) Translates to: GIVEKSALAASL*VSLVKSSCAVS Trigger: CGAGACTGCGCAAGAAGATTTCACCAGACTTACCAACAGCGACGCGGCGAGAGCTGATTTCTCCACAATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS TCA 72 bp | AATCTTCTTGCGCAGTCTCGGGAACATCTTCAGCTTTaGCTGAGAACGGGCTCCTGGCGAGTGCAAACGGAA | + |
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Preference number: 6 (lower is better) Translates to: NLLAQSREHLQL*LRTGSWRVQTE Trigger: TTCCGTTTGCACTCGCCAGGAGCCCGTTCTCAGTCAAAGCTGAAGATGTTCCCGAGACTGCGCAAGAAGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS CCA 72 bp | TCCTTGCCGGCGAAGCTGGAATGCTTGCTCTCAAAATaGCGTTTCAGTTTGTTGGGTTTCATCGACTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: SLPAKLECLLSK*RFSLLGFIDSA Trigger: GGCGGAGTCGATGAAACCCAACAAACTGAAACGCCATTTTGAGAGCAAGCATTCCAGCTTCGCCGGCAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS CAA 90 bp | TGTGTGACTGGCATTGTGGAGAAATCAGCTCTCGCCGCGTCGCTGTaGGTAAGTCTGGTGAAATCTTCTTGCGCAGTCTCGGGAACATCT | + |
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Preference number: 6 (lower is better) Translates to: CVTGIVEKSALAASL*VSLVKSSCAVSGTS Trigger: AGATGTTCCCGAGACTGCGCAAGAAGATTTCACCAGACTTACCAACAGCGACGCGGCGAGAGCTGATTTCTCCACAATGCCAGTCACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS CCA 72 bp | TGGAATGCTTGCTCTCAAAATGGCGTTTCAGTTTGTTaGGTTTCATCGACTCCGCCGACAGAACCACCCCAC | + |
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Preference number: 6 (lower is better) Translates to: WNACSQNGVSVC*VSSTPPTEPPH Trigger: GTGGGGTGGTTCTGTCGGCGGAGTCGATGAAACCCAACAAACTGAAACGCCATTTTGAGAGCAAGCATTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS CAA 90 bp | AGGCGCAACACCATCTCTGACAGAACTGGGTATGACTGCAAACACTaGACCCAGAACTGTGTGACTGGCATTGTGGAGAAATCAGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: RRNTISDRTGYDCKH*TQNCVTGIVEKSAL Trigger: GAGAGCTGATTTCTCCACAATGCCAGTCACACAGTTCTGGGTCAAGTGTTTGCAGTCATACCCAGTTCTGTCAGAGATGGTGTTGCGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS GCA 72 bp | AGGCGCAACACCATCTCTGACAGAACTGGGTATGACTaGAAACACTTGACCCAGAACTGTGTGACTGGCATT | + |
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Preference number: 6 (lower is better) Translates to: RRNTISDRTGYD*KHLTQNCVTGI Trigger: AATGCCAGTCACACAGTTCTGGGTCAAGTGTTTGCAGTCATACCCAGTTCTGTCAGAGATGGTGTTGCGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS GCA 72 bp | CCAAGAGATCTCATGCTGTCTCAGAAACGAGTCGACTaGCTCAAATACATCAAGGGCAGTAGCTGTCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: PRDLMLSQKRVD*LKYIKGSSCPF Trigger: GAAAGGACAGCTACTGCCCTTGATGTATTTGAGGCAGTCGACTCGTTTCTGAGACAGCATGAGATCTCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS CAA 72 bp | TTTGCAGATGAAGCATACAATGAGCTCCAATGGCTTTaGGGGACTCATTTAGGACCAGGCGCTGAAACCCAG | + |
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Preference number: 6 (lower is better) Translates to: FADEAYNELQWL*GTHLGPGAETQ Trigger: CTGGGTTTCAGCGCCTGGTCCTAAATGAGTCCCCAAAAGCCATTGGAGCTCATTGTATGCTTCATCTGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS GCA 72 bp | ACAGCCATCTCCCTTCAGTATGAAGTAGCAGGGTTTTaGTTGGCTCATCTAAATCACTGCAGAGCTGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: TAISLQYEVAGF*LAHLNHCRAAE Trigger: TTCTGCAGCTCTGCAGTGATTTAGATGAGCCAAGCAAAACCCTGCTACTTCATACTGAAGGGAGATGGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS CCA 72 bp | AACGTCTGTCGATTCATCGAGCTGGATGCTGCATATTaGAAGTGGAGCAGATTTAATTTCCTGGACCACCTG | + |
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Preference number: 6 (lower is better) Translates to: NVCRFIELDAAY*KWSRFNFLDHL Trigger: CAGGTGGTCCAGGAAATTAAATCTGCTCCACTTCCAATATGCAGCATCCAGCTCGATGAATCGACAGACGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS CCA 72 bp | ACTGCTTCTTTCTCACCAGATCAGAAATTCTCGGGGTaGTCTTTGCAAGAGCACAGCGAAGATCATCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: TASFSPDQKFSG*SLQEHSEDHLP Trigger: TGGAAGATGATCTTCGCTGTGCTCTTGCAAAGACCACCCCGAGAATTTCTGATCTGGTGAGAAAGAAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS CAA 72 bp | GCCATCTCCCTTCAGTATGAAGTAGCAGGGTTTTGCTaGGCTCATCTAAATCACTGCAGAGCTGCAGAAACA | + |
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Preference number: 6 (lower is better) Translates to: AISLQYEVAGFC*AHLNHCRAAET Trigger: TGTTTCTGCAGCTCTGCAGTGATTTAGATGAGCCAAGCAAAACCCTGCTACTTCATACTGAAGGGAGATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS CAA 72 bp | ACCATCTCTGACAGAACTGGGTATGACTGCAAACACTaGACCCAGAACTGTGTGACTGGCATTGTGGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: TISDRTGYDCKH*TQNCVTGIVEK Trigger: TTTCTCCACAATGCCAGTCACACAGTTCTGGGTCAAGTGTTTGCAGTCATACCCAGTTCTGTCAGAGATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS GCA 72 bp | AGGGTTTTGCTTGGCTCATCTAAATCACTGCAGAGCTaGAGAAACAGTCGACTGTTCAAAGAACTCGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: RVLLGSSKSLQS*RNSRLFKELAF Trigger: AAAGGCGAGTTCTTTGAACAGTCGACTGTTTCTGCAGCTCTGCAGTGATTTAGATGAGCCAAGCAAAACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS GCA 72 bp | GAAGTAGCAGGGTTTTGCTTGGCTCATCTAAATCACTaGAGAGCTGCAGAAACAGTCGACTGTTCAAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: EVAGFCLAHLNH*RAAETVDCSKN Trigger: GTTCTTTGAACAGTCGACTGTTTCTGCAGCTCTGCAGTGATTTAGATGAGCCAAGCAAAACCCTGCTACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS CAA 72 bp | ACAAACTTGAGAACCCTGTTTCACACAGATATGTTGTaGGAAAAGGAAGGAGGAGGCGCAACACCATCTCTG | + |
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Preference number: 6 (lower is better) Translates to: TNLRTLFHTDML*EKEGGGATPSL Trigger: CAGAGATGGTGTTGCGCCTCCTCCTTCCTTTTCCAACAACATATCTGTGTGAAACAGGGTTCTCAAGTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS CAA 90 bp | GGACACTTTTCATTACTTCCTGGAAGTCTTGGGGCAGCGTCTTCATaGCTAATGTTTGCAGATGAAGCATACAATGAGCTCCAATGGCTT | + |
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Preference number: 6 (lower is better) Translates to: GHFSLLPGSLGAASS*LMFADEAYNELQWL Trigger: AAGCCATTGGAGCTCATTGTATGCTTCATCTGCAAACATTAGCAATGAAGACGCTGCCCCAAGACTTCCAGGAAGTAATGAAAAGTGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS TCA 72 bp | AGAACTTTCCCTCTTGACAGCCATCTCCCTTCAGTATaGAGTAGCAGGGTTTTGCTTGGCTCATCTAAATCA | + |
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Preference number: 6 (lower is better) Translates to: RTFPLDSHLPSV*SSRVLLGSSKS Trigger: TGATTTAGATGAGCCAAGCAAAACCCTGCTACTTCATACTGAAGGGAGATGGCTGTCAAGAGGGAAAGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS CAA 72 bp | TCATTACTTCCTGGAAGTCTTGGGGCAGCGTCTTCATaGCTAATGTTTGCAGATGAAGCATACAATGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: SLLPGSLGAASS*LMFADEAYNEL Trigger: GAGCTCATTGTATGCTTCATCTGCAAACATTAGCAATGAAGACGCTGCCCCAAGACTTCCAGGAAGTAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS CAA 72 bp | CTAACAAACTTGAGAACCCTGTTTCACACAGATATGTaGTTGGAAAAGGAAGGAGGAGGCGCAACACCATCT | + |
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Preference number: 6 (lower is better) Translates to: LTNLRTLFHTDM*LEKEGGGATPS Trigger: AGATGGTGTTGCGCCTCCTCCTTCCTTTTCCAACAACATATCTGTGTGAAACAGGGTTCTCAAGTTTGTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS TCA 72 bp | TCATTATATTTTCTTCTCTTAACGTTCCTCTCTCCATaGTCCACTGGCCTGGGATGGTCCACATTTGCAATC | + |
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Preference number: 6 (lower is better) Translates to: SLYFLLLTFLSP*STGLGWSTFAI Trigger: GATTGCAAATGTGGACCATCCCAGGCCAGTGGATCATGGAGAGAGGAACGTTAAGAGAAGAAAATATAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041466.14 ENSMUST00000077320.3 |
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| CDS TCA 72 bp | ACAGTCGACTGTTCAAAGAACTCGCCTTTACGAAATTaGCAGAACTCAGGACACTTTTCATTACTTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: TVDCSKNSPLRN*QNSGHFSLLPG Trigger: TCCAGGAAGTAATGAAAAGTGTCCTGAGTTCTGTCAATTTCGTAAAGGCGAGTTCTTTGAACAGTCGACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS CCA 72 bp | AAATTGACAGAACTCAGGACACTTTTCATTACTTCCTaGAAGTCTTGGGGCAGCGTCTTCATTGCTAATGTT | + |
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Preference number: 6 (lower is better) Translates to: KLTELRTLFITS*KSWGSVFIANV Trigger: AACATTAGCAATGAAGACGCTGCCCCAAGACTTCCAGGAAGTAATGAAAAGTGTCCTGAGTTCTGTCAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS CAA 72 bp | GGAATGAGTGGATCTTTTCAGACAGATCCAGGCAGGTaGAATTTGGTCCTTGCAGTGATAAATTCAACTCAT | + |
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Preference number: 6 (lower is better) Translates to: GMSGSFQTDPGR*NLVLAVINSTH Trigger: ATGAGTTGAATTTATCACTGCAAGGACCAAATTCAACCTGCCTGGATCTGTCTGAAAAGATCCACTCATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS CAA 72 bp | TCTCGGGTAGATTTGGAAAGTACCAGGAAATTTCACTaGCAAGCATGTCCAAGTGTTCTTTCACGGAAATCA | + |
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Preference number: 6 (lower is better) Translates to: SRVDLESTRKFH*QACPSVLSRKS Trigger: TGATTTCCGTGAAAGAACACTTGGACATGCTTGCAAGTGAAATTTCCTGGTACTTTCCAAATCTACCCGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS CAA 72 bp | AATACATCAAGGGCAGTAGCTGTCCTTTCAAGAGGTTaGCAGCAAAGAAACTCATCTTTAAAGTCACCATCA | + |
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Preference number: 6 (lower is better) Translates to: NTSRAVAVLSRG*QQRNSSLKSPS Trigger: TGATGGTGACTTTAAAGATGAGTTTCTTTGCTGCAAACCTCTTGAAAGGACAGCTACTGCCCTTGATGTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS CAA 90 bp | ACTGCCTCAAATACATCAAGGGCAGTAGCTGTCCTTTCAAGAGGTTaGCAGCAAAGAAACTCATCTTTAAAGTCACCATCATTAATATAC | + |
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Preference number: 6 (lower is better) Translates to: TASNTSRAVAVLSRG*QQRNSSLKSPSLIY Trigger: GTATATTAATGATGGTGACTTTAAAGATGAGTTTCTTTGCTGCAAACCTCTTGAAAGGACAGCTACTGCCCTTGATGTATTTGAGGCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS TCA 72 bp | ATTGGAAGTGGAGCAGATTTAATTTCCTGGACCACCTaGTCAAGAATATCAGCAGACATGTCATGTATTCTT | + |
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Preference number: 6 (lower is better) Translates to: IGSGADLISWTT*SRISADMSCIL Trigger: AAGAATACATGACATGTCTGCTGATATTCTTGATCAGGTGGTCCAGGAAATTAAATCTGCTCCACTTCCAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS GCA 72 bp | TTTTCAGACAGATCCAGGCAGGTTGAATTTGGTCCTTaGAGTGATAAATTCAACTCATTCAAAATGGTAAAG | + |
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Preference number: 6 (lower is better) Translates to: FSDRSRQVEFGP*SDKFNSFKMVK Trigger: CTTTACCATTTTGAATGAGTTGAATTTATCACTGCAAGGACCAAATTCAACCTGCCTGGATCTGTCTGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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| CDS CAA 72 bp | TCATCTTCCACCACAAGTCTACTTCTGTATTTAGACTaGATAACTAACAAACTTGAGAACCCTGTTTCACAC | + |
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Preference number: 6 (lower is better) Translates to: SSSTTSLLLYLD*ITNKLENPVSH Trigger: GTGTGAAACAGGGTTCTCAAGTTTGTTAGTTATCAAGTCTAAATACAGAAGTAGACTTGTGGTGGAAGATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041466.14 |
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