RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZBED4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034333

Ensembl transcript IDs: ENSMUST00000041297.15

Found 219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GACACCTGGCCTGAAGGAGGAGTAAGGCACATGTGGATATTATGGTaGGAACTGGCAGGTAGCCCCAGATGCCTGGTCTGGTGTCCTACA +
Preference number: 1 (lower is better)
Translates to: DTWPEGGVRHMWILW*ELAGSPRCLVWCPT
Trigger: TGTAGGACACCAGACCAGGCATCTGGGGCTACCTGCCAGTTCTCACCATAATATCCACATGTGCCTTACTCCTCCTTCAGGCCAGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
3UTR GCA 90 bp TGGAGATTGGATCAGCAGGCCATCTGTTGTAAACGTGTCATATCATaGTCTGGTGAAGTCCTAAGCATGACTTTAAAACCTGGATCCAAT +
Preference number: 1 (lower is better)
Translates to: WRLDQQAICCKRVIS*SGEVLSMTLKPGSN
Trigger: ATTGGATCCAGGTTTTAAAGTCATGCTTAGGACTTCACCAGAGCATGATATGACACGTTTACAACAGATGGCCTGCTGATCCAATCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
3UTR CCA 90 bp GAGATAGCTTTATTGTATAGAGATGCAAAAAGTAAACCAGAGGCATaGAGATTGGATCAGCAGGCCATCTGTTGTAAACGTGTCATATCA +
Preference number: 1 (lower is better)
Translates to: EIALLYRDAKSKPEA*RLDQQAICCKRVIS
Trigger: TGATATGACACGTTTACAACAGATGGCCTGCTGATCCAATCTCCATGCCTCTGGTTTACTTTTTGCATCTCTATACAATAAAGCTATCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
3UTR-3UTR TCA 90 bp CCAGGCAAACTCAGACCGAGCCCACACAGTATTTCAACACAACATTTGTTTTCTATGTGGATATTATGGTaGGAACTGGCAGGTAGCCCC +
Preference number: 2 (lower is better)
Translates to: PGKLRPSPHSISTQHLFSMWILW*ELAGSP
Trigger: GGGGCTACCTGCCAGTTCTCACCATAATATCCACAT...AGAAAACAAATGTTGTGTTGAAATACTGTGTGGGCTCGGTCTGAGTTTGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
3UTR-3UTR CCA 90 bp AAAACCTGGATCCAATTTCAAGGGGCTCATGATAAGTGGGATATCTCTGAGTTAACTGTTCAGTCAGGATaGCTTAACCTCCACCTCCTA +
Preference number: 2 (lower is better)
Translates to: KTWIQFQGAHDKWDISELTVQSG*LNLHLL
Trigger: TAGGAGGTGGAGGTTAAGCCATCCTGACTGAACAGT...TAACTCAGAGATATCCCACTTATCATGAGCCCCTTGAAATTGGATCCAGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
3UTR-3UTR TCA 90 bp AAAACCTGGATCCAATTTCAAGGGGCTCATGATAAGTGGGATATCTCTGAGTTAGTGATTGACACTCCATaGTATGCCCAAGTTCAGTTT +
Preference number: 2 (lower is better)
Translates to: KTWIQFQGAHDKWDISELVIDTP*YAQVQF
Trigger: AAACTGAACTTGGGCATATCATGGAGTGTCAATCAC...TAACTCAGAGATATCCCACTTATCATGAGCCCCTTGAAATTGGATCCAGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
3UTR-3UTR CCA 90 bp CCAGGCAAACTCAGACCGAGCCCACACAGTATTTCAACACAACATTTGTTTTCTTTGTTTTCAAATGCCTaGTTCTGTAAACAGCTTCCA +
Preference number: 2 (lower is better)
Translates to: PGKLRPSPHSISTQHLFSLFSNA*FCKQLP
Trigger: TGGAAGCTGTTTACAGAACCAGGCATTTGAAAACAA...AGAAAACAAATGTTGTGTTGAAATACTGTGTGGGCTCGGTCTGAGTTTGCCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
3UTR CAA 90 bp GGTCAAACTGAGGGGTCAGTGCATACTTCTTATGAGATAGCTTTATaGTATAGAGATGCAAAAAGTAAACCAGAGGCATGGAGATTGGAT +
Preference number: 2 (lower is better)
Translates to: GQTEGSVHTSYEIAL*YRDAKSKPEAWRLD
Trigger: ATCCAATCTCCATGCCTCTGGTTTACTTTTTGCATCTCTATACAATAAAGCTATCTCATAAGAAGTATGCACTGACCCCTCAGTTTGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
3UTR-3UTR TCA 90 bp ATAGCTTTATTGTATAGAGATGCAAAAAGTAAACCAGAGGCATGGAGATTGGATATGGGACCATTCTCATaGCCAATTAGCCATGTGATT +
Preference number: 2 (lower is better)
Translates to: IALLYRDAKSKPEAWRLDMGPFS*PISHVI
Trigger: AATCACATGGCTAATTGGTCATGAGAATGGTCCCAT...ATCCAATCTCCATGCCTCTGGTTTACTTTTTGCATCTCTATACAATAAAGCTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
3UTR-3UTR CCA 90 bp TATGAGATAGCTTTATTGTATAGAGATGCAAAAAGTAAACCAGAGGCATGGAGACATGACTTTAAAACCTaGATCCAATTTCAAGGGGCT +
Preference number: 2 (lower is better)
Translates to: YEIALLYRDAKSKPEAWRHDFKT*IQFQGA
Trigger: AGCCCCTTGAAATTGGATCCAGGTTTTAAAGTCATG...TCTCCATGCCTCTGGTTTACTTTTTGCATCTCTATACAATAAAGCTATCTCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
3UTR CCA 72 bp TATTATGGTGAGAACTGGCAGGTAGCCCCAGATGCCTaGTCTGGTGTCCTACATGGCCCTGCCAGGCAAGTC +
Preference number: 3 (lower is better)
Translates to: YYGENWQVAPDA*SGVLHGPARQV
Trigger: GACTTGCCTGGCAGGGCCATGTAGGACACCAGACCAGGCATCTGGGGCTACCTGCCAGTTCTCACCATAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
3UTR TCA 72 bp CTGACATGGGACCATTCTCATGACCAATTAGCCATGTaGTTGACACTCCATGATATGCCCAAGTTCAGTTTT +
Preference number: 3 (lower is better)
Translates to: LTWDHSHDQLAM*LTLHDMPKFSF
Trigger: AAAACTGAACTTGGGCATATCATGGAGTGTCAATCACATGGCTAATTGGTCATGAGAATGGTCCCATGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
3UTR CCA 72 bp TTTTGGAGCCTGTGGTTAAGAACTGTTCAGTCAGGATaGCTTAACCTCCACCTCCTATTTACAGGTTTCATT +
Preference number: 3 (lower is better)
Translates to: FWSLWLRTVQSG*LNLHLLFTGFI
Trigger: AATGAAACCTGTAAATAGGAGGTGGAGGTTAAGCCATCCTGACTGAACAGTTCTTAACCACAGGCTCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
3UTR CCA 72 bp ATAGAGATGCAAAAAGTAAACCAGAGGCATGGAGATTaGATCAGCAGGCCATCTGTTGTAAACGTGTCATAT +
Preference number: 3 (lower is better)
Translates to: IEMQKVNQRHGD*ISRPSVVNVSY
Trigger: ATATGACACGTTTACAACAGATGGCCTGCTGATCCAATCTCCATGCCTCTGGTTTACTTTTTGCATCTCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
3UTR CCA 72 bp TTATTGTATAGAGATGCAAAAAGTAAACCAGAGGCATaGAGATTGGATCAGCAGGCCATCTGTTGTAAACGT +
Preference number: 3 (lower is better)
Translates to: LLYRDAKSKPEA*RLDQQAICCKR
Trigger: ACGTTTACAACAGATGGCCTGCTGATCCAATCTCCATGCCTCTGGTTTACTTTTTGCATCTCTATACAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp GCAGGTAGCCCCAGATGCCTGGTCTGGTGTCCTACATGGCCCTGCCAGGCAAGTTGGTCGGACAGCGGATaGGAAGGTGACCCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: AGSPRCLVWCPTWPCQASWSDSG*EGDPVS
Trigger: GCTCACTGGGTCACCTTCGCATCCGCTGTCCGACCA...ACTTGCCTGGCAGGGCCATGTAGGACACCAGACCAGGCATCTGGGGCTACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp GCAGGTAGCCCCAGATGCCTGGTCTGGTGTCCTACATGGCCCTGCCAGGCAAGTGGCAGACAGGCGGCTTaGCATGGCTTCCTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: AGSPRCLVWCPTWPCQASGRQAA*HGFLQG
Trigger: TCCCTGAAGGAAGCCATGGCAAGCCGCCTGTCTGCC...ACTTGCCTGGCAGGGCCATGTAGGACACCAGACCAGGCATCTGGGGCTACCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp GCAGGTAGCCCCAGATGCCTGGTCTGGTGTCCTACATGGCCCTGCCAGGCAAGTCATAGGGTACAATGGTaGGATGCCTGTGTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: AGSPRCLVWCPTWPCQASHRVQW*DACVAP
Trigger: GGGGGCAACACAGGCATCCCACCATTGTACCCTATG...ACTTGCCTGGCAGGGCCATGTAGGACACCAGACCAGGCATCTGGGGCTACCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp GCAGGTAGCCCCAGATGCCTGGTCTGGTGTCCTACATGGCCCTGCCAGGCAAGTTTAGGTTCCAGTAGGTaGGTGGGTCACAGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: AGSPRCLVWCPTWPCQASLGSSR*VGHSCV
Trigger: AACACAGCTGTGACCCACTCACCTACTGGAACCTAA...ACTTGCCTGGCAGGGCCATGTAGGACACCAGACCAGGCATCTGGGGCTACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp GCAGGTAGCCCCAGATGCCTGGTCTGGTGTCCTACATGGCCCTGCCAGGCAAGTATACTGGGAGAAGAGTaGGCCATAGTCATCCTCACT +
Preference number: 4 (lower is better)
Translates to: AGSPRCLVWCPTWPCQASILGEE*AIVILT
Trigger: AGTGAGGATGACTATGGCTCACTCTTCTCCCAGTAT...ACTTGCCTGGCAGGGCCATGTAGGACACCAGACCAGGCATCTGGGGCTACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp GCAGGTAGCCCCAGATGCCTGGTCTGGTGTCCTACATGGCCCTGCCAGGCAAGTGGTGGCAGTGTCCTCTaGGGTAGAATTCAGTATTTC +
Preference number: 4 (lower is better)
Translates to: AGSPRCLVWCPTWPCQASGGSVL*GRIQYF
Trigger: GAAATACTGAATTCTACCTCAGAGGACACTGCCACC...ACTTGCCTGGCAGGGCCATGTAGGACACCAGACCAGGCATCTGGGGCTACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp GCAGGTAGCCCCAGATGCCTGGTCTGGTGTCCTACATGGCCCTGCCAGGCAAGTAGCTTATGTGTCGACTaGAAAGAAGGCTCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: AGSPRCLVWCPTWPCQASSLCVD*KEGSGS
Trigger: TGACCCAGAGCCTTCTTTCCAGTCGACACATAAGCT...ACTTGCCTGGCAGGGCCATGTAGGACACCAGACCAGGCATCTGGGGCTACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp GCAGGTAGCCCCAGATGCCTGGTCTGGTGTCCTACATGGCCCTGCCAGGCAAGTGGTTTCTGTCTGCCATaGTTTCTGAAGCGTCGTCAT +
Preference number: 4 (lower is better)
Translates to: AGSPRCLVWCPTWPCQASGFCLP*FLKRRH
Trigger: ATGACGACGCTTCAGAAACCATGGCAGACAGAAACC...ACTTGCCTGGCAGGGCCATGTAGGACACCAGACCAGGCATCTGGGGCTACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp GCCAGGCAAGTCAGCCCTGGTACAATAGCTAGCACTCTGAAGCACGTTTCCAGTACAACGATGCGGAGTTaGGATCCCCTTCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: ARQVSPGTIASTLKHVSSTTMRS*DPLLGA
Trigger: TGCCCCCAGAAGGGGATCTCAACTCCGCATCGTTGT...ACTGGAAACGTGCTTCAGAGTGCTAGCTATTGTACCAGGGCTGACTTGCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp GCCAGGCAAGTCAGCCCTGGTACAATAGCTAGCACTCTGAAGCACGTTTCCAGTCGGCTGACCTCCTCCTaGACCCAGATGTGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: ARQVSPGTIASTLKHVSSRLTSS*TQMCFW
Trigger: CCAAAAGCACATCTGGGTCCAGGAGGAGGTCAGCCG...ACTGGAAACGTGCTTCAGAGTGCTAGCTATTGTACCAGGGCTGACTTGCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp GCCAGGCAAGTCAGCCCTGGTACAATAGCTAGCACTCTGAAGCACGTTTCCAGTATGGTCCGGCCACAGTaGAGGCACACCACCTTTGTT +
Preference number: 4 (lower is better)
Translates to: ARQVSPGTIASTLKHVSSMVRPQ*RHTTFV
Trigger: AACAAAGGTGGTGTGCCTGCACTGTGGCCGGACCAT...ACTGGAAACGTGCTTCAGAGTGCTAGCTATTGTACCAGGGCTGACTTGCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp GCCAGGCAAGTCAGCCCTGGTACAATAGCTAGCACTCTGAAGCACGTTTCCAGTTGGCCATGGAACCGCTaGAGATGTCTCAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: ARQVSPGTIASTLKHVSSWPWNR*RCLRRQ
Trigger: CTGTCTCCTGAGACATCTGCAGCGGTTCCATGGCCA...ACTGGAAACGTGCTTCAGAGTGCTAGCTATTGTACCAGGGCTGACTTGCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp GCCAGGCAAGTCAGCCCTGGTACAATAGCTAGCACTCTGAAGCACGTTTCCAGTATCTGCAGGCTGTGGTaGAAGCAACAGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: ARQVSPGTIASTLKHVSSICRLW*KQQRGR
Trigger: CCTCCCTCTCTGTTGCTTCCACCACAGCCTGCAGAT...ACTGGAAACGTGCTTCAGAGTGCTAGCTATTGTACCAGGGCTGACTTGCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp AAAACGCACCTTGACACCTGGCCTGAAGGAGGAGTAAGGCACATGTGGATATTAGTTGAGATCCCCTTCTaGGGGCAGCAGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: KTHLDTWPEGGVRHMWILVEIPF*GQQGRQ
Trigger: CTGCCTGCCCTGCTGCCCCCAGAAGGGGATCTCAAC...TAATATCCACATGTGCCTTACTCCTCCTTCAGGCCAGGTGTCAAGGTGCGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp GCCAGGCAAGTCAGCCCTGGTACAATAGCTAGCACTCTGAAGCACGTTTCCAGTCGCTGGCTGCTTCTCTaGAGAAGACACTACAGAGGC +
Preference number: 4 (lower is better)
Translates to: ARQVSPGTIASTLKHVSSRWLLL*RRHYRG
Trigger: GCCTCTGTAGTGTCTTCTCCAGAGAAGCAGCCAGCG...ACTGGAAACGTGCTTCAGAGTGCTAGCTATTGTACCAGGGCTGACTTGCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp GAGATGCAAAAAGTAAACCAGAGGCATGGAGATTGGATCAGCAGGCCATCTGTTGTTGGGGGAGGAGCCTaGCAAGGCCTCCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: EMQKVNQRHGDWISRPSVVGGGA*QGLLSA
Trigger: AGCAGAGAGGAGGCCTTGGCAGGCTCCTCCCCCAAC...AACAGATGGCCTGCTGATCCAATCTCCATGCCTCTGGTTTACTTTTTGCATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp GCCAGGCAAGTCAGCCCTGGTACAATAGCTAGCACTCTGAAGCACGTTTCCAGTTTCTGCACCATCCTCTaGCTCTTGATAGCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: ARQVSPGTIASTLKHVSSFCTIL*LLIASL
Trigger: GAGCGAGGCTATCAAGAGCCAGAGGATGGTGCAGAA...ACTGGAAACGTGCTTCAGAGTGCTAGCTATTGTACCAGGGCTGACTTGCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp GCCAGGCAAGTCAGCCCTGGTACAATAGCTAGCACTCTGAAGCACGTTTCCAGTGCCTCACATGTCTCATaGGGCAACTTGTACTCAGGT +
Preference number: 4 (lower is better)
Translates to: ARQVSPGTIASTLKHVSSASHVS*GNLYSG
Trigger: ACCTGAGTACAAGTTGCCTCATGAGACATGTGAGGC...ACTGGAAACGTGCTTCAGAGTGCTAGCTATTGTACCAGGGCTGACTTGCCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp GCCAGGCAAGTCAGCCCTGGTACAATAGCTAGCACTCTGAAGCACGTTTCCAGTTGTGCTCTCCACATGTaGCTGATGAGGCAGCTTGTA +
Preference number: 4 (lower is better)
Translates to: ARQVSPGTIASTLKHVSSCALHM*LMRQLV
Trigger: TACAAGCTGCCTCATCAGGCACATGTGGAGAGCACA...ACTGGAAACGTGCTTCAGAGTGCTAGCTATTGTACCAGGGCTGACTTGCCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp GCCAGGCAAGTCAGCCCTGGTACAATAGCTAGCACTCTGAAGCACGTTTCCAGTTTGAGTACATGGCCATaGAACCGCTGCAGATGTCTC +
Preference number: 4 (lower is better)
Translates to: ARQVSPGTIASTLKHVSSLSTWP*NRCRCL
Trigger: GAGACATCTGCAGCGGTTCCATGGCCATGTACTCAA...ACTGGAAACGTGCTTCAGAGTGCTAGCTATTGTACCAGGGCTGACTTGCCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp GCCAGGCAAGTCAGCCCTGGTACAATAGCTAGCACTCTGAAGCACGTTTCCAGTAATGGTCTCAGCACATaGCACACAGACTGCATGACC +
Preference number: 4 (lower is better)
Translates to: ARQVSPGTIASTLKHVSSNGLST*HTDCMT
Trigger: GGTCATGCAGTCTGTGTGCCATGTGCTGAGACCATT...ACTGGAAACGTGCTTCAGAGTGCTAGCTATTGTACCAGGGCTGACTTGCCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp GCCAGGCAAGTCAGCCCTGGTACAATAGCTAGCACTCTGAAGCACGTTTCCAGTTCCTGGACCCAGATGTaGTTTTGGGAAGAGAAAGGT +
Preference number: 4 (lower is better)
Translates to: ARQVSPGTIASTLKHVSSSWTQM*FWEEKG
Trigger: ACCTTTCTCTTCCCAAAAGCACATCTGGGTCCAGGA...ACTGGAAACGTGCTTCAGAGTGCTAGCTATTGTACCAGGGCTGACTTGCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp AAAACGCACCTTGACACCTGGCCTGAAGGAGGAGTAAGGCACATGTGGATATTAGCCTGGAGACAACGATaGGGAGTTGAGATCCCCTTC +
Preference number: 4 (lower is better)
Translates to: KTHLDTWPEGGVRHMWILAWRQR*GVEIPF
Trigger: GAAGGGGATCTCAACTCCGCATCGTTGTCTCCAGGC...TAATATCCACATGTGCCTTACTCCTCCTTCAGGCCAGGTGTCAAGGTGCGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp AGAACTGTTCAGTCAGGATGGCTTAACCTCCACCTCCTATTTACAGGTTTCATTCCAGAGGCCTCCGGATaGCTGGAGAACGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: RTVQSGWLNLHLLFTGFIPEASG*LENGTE
Trigger: CTCTGTCCCGTTCTCCAGGCATCCGGAGGCCTCTGG...AATGAAACCTGTAAATAGGAGGTGGAGGTTAAGCCATCCTGACTGAACAGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp GCAGGTAGCCCCAGATGCCTGGTCTGGTGTCCTACATGGCCCTGCCAGGCAAGTACCTTCTTATTTTGCTaGAAAACAGTACCTGATTCA +
Preference number: 4 (lower is better)
Translates to: AGSPRCLVWCPTWPCQASTFLFC*KTVPDS
Trigger: TGAATCAGGTACTGTTTTCCAGCAAAATAAGAAGGT...ACTTGCCTGGCAGGGCCATGTAGGACACCAGACCAGGCATCTGGGGCTACCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp GCCAGGCAAGTCAGCCCTGGTACAATAGCTAGCACTCTGAAGCACGTTTCCAGTTGCTGTACTTTTCAGTaGCAGACACATCAGAGGACA +
Preference number: 4 (lower is better)
Translates to: ARQVSPGTIASTLKHVSSCCTFQ*QTHQRT
Trigger: TGTCCTCTGATGTGTCTGTCACTGAAAAGTACAGCA...ACTGGAAACGTGCTTCAGAGTGCTAGCTATTGTACCAGGGCTGACTTGCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp AAAACGCACCTTGACACCTGGCCTGAAGGAGGAGTAAGGCACATGTGGATATTAGGGGCCAGGGAAAAGTaGTGCCAGACTTCTGACTTT +
Preference number: 4 (lower is better)
Translates to: KTHLDTWPEGGVRHMWILGAREK*CQTSDF
Trigger: AAAGTCAGAAGTCTGGCATCACTTTTCCCTGGCCCC...TAATATCCACATGTGCCTTACTCCTCCTTCAGGCCAGGTGTCAAGGTGCGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp AGAACTGTTCAGTCAGGATGGCTTAACCTCCACCTCCTATTTACAGGTTTCATTCTCTCTTGCTCTGGGTaGCCGATGGACCCGCTCACA +
Preference number: 4 (lower is better)
Translates to: RTVQSGWLNLHLLFTGFILSCSG*PMDPLT
Trigger: TGTGAGCGGGTCCATCGGTCACCCAGAGCAAGAGAG...AATGAAACCTGTAAATAGGAGGTGGAGGTTAAGCCATCCTGACTGAACAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp AGAACTGTTCAGTCAGGATGGCTTAACCTCCACCTCCTATTTACAGGTTTCATTGGCACACAGACTGCATaGCCTCCCACTGGTCACAGC +
Preference number: 4 (lower is better)
Translates to: RTVQSGWLNLHLLFTGFIGTQTA*PPTGHS
Trigger: GCTGTGACCAGTGGGAGGTCATGCAGTCTGTGTGCC...AATGAAACCTGTAAATAGGAGGTGGAGGTTAAGCCATCCTGACTGAACAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp AAAACGCACCTTGACACCTGGCCTGAAGGAGGAGTAAGGCACATGTGGATATTAAAGTCTTGCCTGTACTaGTCTGCCTCCTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: KTHLDTWPEGGVRHMWILKSCLY*SASSSV
Trigger: CACAGAGGAGGAGGCAGAGCAGTACAGGCAAGACTT...TAATATCCACATGTGCCTTACTCCTCCTTCAGGCCAGGTGTCAAGGTGCGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp GAGATGCAAAAAGTAAACCAGAGGCATGGAGATTGGATCAGCAGGCCATCTGTTGGGTCACAGCTTCCATaGCTACGCTGTACAGTGTGC +
Preference number: 4 (lower is better)
Translates to: EMQKVNQRHGDWISRPSVGSQLP*LRCTVC
Trigger: GCACACTGTACAGCGTAGCCATGGAAGCTGTGACCC...AACAGATGGCCTGCTGATCCAATCTCCATGCCTCTGGTTTACTTTTTGCATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp GCCAGGCAAGTCAGCCCTGGTACAATAGCTAGCACTCTGAAGCACGTTTCCAGTAAAAGTGCTGAGCAATaGTGGTCCTCACAATGTGGT +
Preference number: 4 (lower is better)
Translates to: ARQVSPGTIASTLKHVSSKSAEQ*WSSQCG
Trigger: ACCACATTGTGAGGACCACCATTGCTCAGCACTTTT...ACTGGAAACGTGCTTCAGAGTGCTAGCTATTGTACCAGGGCTGACTTGCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp CCAGGCAAACTCAGACCGAGCCCACACAGTATTTCAACACAACATTTGTTTTCTATGTACCTGGGGTCATaGAGTGTGGCAGACAGGCGG +
Preference number: 4 (lower is better)
Translates to: PGKLRPSPHSISTQHLFSMYLGS*SVADRR
Trigger: CCGCCTGTCTGCCACACTCCATGACCCCAGGTACAT...AGAAAACAAATGTTGTGTTGAAATACTGTGTGGGCTCGGTCTGAGTTTGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp CCAGGCAAACTCAGACCGAGCCCACACAGTATTTCAACACAACATTTGTTTTCTATCATGAGCCTGGGCTaGCCAAAGCTGCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: PGKLRPSPHSISTQHLFSIMSLG*PKLPAS
Trigger: GGATGCTGGCAGCTTTGGCCAGCCCAGGCTCATGAT...AGAAAACAAATGTTGTGTTGAAATACTGTGTGGGCTCGGTCTGAGTTTGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp GCCAGGCAAGTCAGCCCTGGTACAATAGCTAGCACTCTGAAGCACGTTTCCAGTGTATTTCTAGCTCCCTaGTTAAGTCTTGCCTGTACT +
Preference number: 4 (lower is better)
Translates to: ARQVSPGTIASTLKHVSSVFLAP*LSLACT
Trigger: AGTACAGGCAAGACTTAATCAGGGAGCTAGAAATAC...ACTGGAAACGTGCTTCAGAGTGCTAGCTATTGTACCAGGGCTGACTTGCCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp GAGATGCAAAAAGTAAACCAGAGGCATGGAGATTGGATCAGCAGGCCATCTGTTTTGCCTGTACTGCTCTaGCTCCTCCTCTGTGAACAG +
Preference number: 4 (lower is better)
Translates to: EMQKVNQRHGDWISRPSVLPVLL*LLLCEQ
Trigger: CTGTTCACAGAGGAGGAGGCAGAGCAGTACAGGCAA...AACAGATGGCCTGCTGATCCAATCTCCATGCCTCTGGTTTACTTTTTGCATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp AAAACCTGGATCCAATTTCAAGGGGCTCATGATAAGTGGGATATCTCTGAGTTATGGGCTGGCCAAAGCTaGCAGCATCCATGGGTGTGC +
Preference number: 4 (lower is better)
Translates to: KTWIQFQGAHDKWDISELWAGQS*QHPWVC
Trigger: GCACACCCATGGATGCTGGCAGCTTTGGCCAGCCCA...TAACTCAGAGATATCCCACTTATCATGAGCCCCTTGAAATTGGATCCAGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp CCAGGCAAACTCAGACCGAGCCCACACAGTATTTCAACACAACATTTGTTTTCTCACATCTGCAGGCTGTaGTGGAAGCAACAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PGKLRPSPHSISTQHLFSHICRL*WKQQRG
Trigger: CCCTCTCTGTTGCTTCCACCACAGCCTGCAGATGTG...AGAAAACAAATGTTGTGTTGAAATACTGTGTGGGCTCGGTCTGAGTTTGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp AAAACGCACCTTGACACCTGGCCTGAAGGAGGAGTAAGGCACATGTGGATATTACAGGGGATGGGATCTTaGGAGCCATTTTCTGGACAA +
Preference number: 4 (lower is better)
Translates to: KTHLDTWPEGGVRHMWILQGMGS*EPFSGQ
Trigger: TTGTCCAGAAAATGGCTCCCAAGATCCCATCCCCTG...TAATATCCACATGTGCCTTACTCCTCCTTCAGGCCAGGTGTCAAGGTGCGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp AAAACGCACCTTGACACCTGGCCTGAAGGAGGAGTAAGGCACATGTGGATATTAGAGAACGGGACAGAGTaGCCTCTGAGACATCATTCT +
Preference number: 4 (lower is better)
Translates to: KTHLDTWPEGGVRHMWILENGTE*PLRHHS
Trigger: AGAATGATGTCTCAGAGGCCACTCTGTCCCGTTCTC...TAATATCCACATGTGCCTTACTCCTCCTTCAGGCCAGGTGTCAAGGTGCGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp CCAGGCAAACTCAGACCGAGCCCACACAGTATTTCAACACAACATTTGTTTTCTTTTAAGTGGGGACCCTaGGTCACAGCCATTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PGKLRPSPHSISTQHLFSFKWGP*VTAIGG
Trigger: ACCTCCAATGGCTGTGACTCAGGGTCCCCACTTAAA...AGAAAACAAATGTTGTGTTGAAATACTGTGTGGGCTCGGTCTGAGTTTGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp CCAGGCAAACTCAGACCGAGCCCACACAGTATTTCAACACAACATTTGTTTTCTACATGGCACACAGACTaGATGACCTCCCACTGGTCA +
Preference number: 4 (lower is better)
Translates to: PGKLRPSPHSISTQHLFSTWHTD*MTSHWS
Trigger: TGACCAGTGGGAGGTCATGCAGTCTGTGTGCCATGT...AGAAAACAAATGTTGTGTTGAAATACTGTGTGGGCTCGGTCTGAGTTTGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp GAGATGCAAAAAGTAAACCAGAGGCATGGAGATTGGATCAGCAGGCCATCTGTTCTGGAGACTTCTTCCTaGAGCTTATGTGTCGACTGG +
Preference number: 4 (lower is better)
Translates to: EMQKVNQRHGDWISRPSVLETSS*SLCVDW
Trigger: CCAGTCGACACATAAGCTCCAGGAAGAAGTCTCCAG...AACAGATGGCCTGCTGATCCAATCTCCATGCCTCTGGTTTACTTTTTGCATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp AAAACCTGGATCCAATTTCAAGGGGCTCATGATAAGTGGGATATCTCTGAGTTAGTCTCAGGAGACAGCTaGTGCCCAGGTTGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: KTWIQFQGAHDKWDISELVSGDS*CPGWWV
Trigger: AACCCACCAACCTGGGCACCAGCTGTCTCCTGAGAC...TAACTCAGAGATATCCCACTTATCATGAGCCCCTTGAAATTGGATCCAGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp GAGATGCAAAAAGTAAACCAGAGGCATGGAGATTGGATCAGCAGGCCATCTGTTTTTCTGCTGAGGATGTaGATCATGGGGATGACCTGG +
Preference number: 4 (lower is better)
Translates to: EMQKVNQRHGDWISRPSVFLLRM*IMGMTW
Trigger: CCAGGTCATCCCCATGATCCACATCCTCAGCAGAAA...AACAGATGGCCTGCTGATCCAATCTCCATGCCTCTGGTTTACTTTTTGCATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp CCAGGCAAACTCAGACCGAGCCCACACAGTATTTCAACACAACATTTGTTTTCTGTTCCAGTAGGTGAGTaGGTCACAGCTGTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PGKLRPSPHSISTQHLFSVPVGE*VTAVFQ
Trigger: CTGGAACACAGCTGTGACCCACTCACCTACTGGAAC...AGAAAACAAATGTTGTGTTGAAATACTGTGTGGGCTCGGTCTGAGTTTGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp ACCTCCTATTTACAGGTTTCATTTAACAGCCACAAAAGCTGTTTTGTTGCAATTAACTTCCCAGAGGGCTaGCAGGCACAGCTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: TSYLQVSFNSHKSCFVAINFPEG*QAQLAA
Trigger: GGCAGCGAGCTGTGCCTGTCAGCCCTCTGGGAAGTT...AATTGCAACAAAACAGCTTTTGTGGCTGTTAAATGAAACCTGTAAATAGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp ATAGCTTTATTGTATAGAGATGCAAAAAGTAAACCAGAGGCATGGAGATTGGATGTGCTTCCAGACGGCTaGCCTCCTCCTGGACCCAGA +
Preference number: 4 (lower is better)
Translates to: IALLYRDAKSKPEAWRLDVLPDG*PPPGPR
Trigger: TCTGGGTCCAGGAGGAGGTCAGCCGTCTGGAAGCAC...ATCCAATCTCCATGCCTCTGGTTTACTTTTTGCATCTCTATACAATAAAGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp AAAACCTGGATCCAATTTCAAGGGGCTCATGATAAGTGGGATATCTCTGAGTTAGCTGAACAGCTTTTCTaGGGGGACTGTACTTGGGGG +
Preference number: 4 (lower is better)
Translates to: KTWIQFQGAHDKWDISELAEQLF*GDCTWG
Trigger: CCCCCAAGTACAGTCCCCTCAGAAAAGCTGTTCAGC...TAACTCAGAGATATCCCACTTATCATGAGCCCCTTGAAATTGGATCCAGGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp AAAACCTGGATCCAATTTCAAGGGGCTCATGATAAGTGGGATATCTCTGAGTTAACCGTGTCCGCTGGCTaGTTCTCTGGAGAAGACACT +
Preference number: 4 (lower is better)
Translates to: KTWIQFQGAHDKWDISELTVSAG*FSGEDT
Trigger: AGTGTCTTCTCCAGAGAAGCAGCCAGCGGACACGGT...TAACTCAGAGATATCCCACTTATCATGAGCCCCTTGAAATTGGATCCAGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp AAAACGCACCTTGACACCTGGCCTGAAGGAGGAGTAAGGCACATGTGGATATTAAACTCATTCATACAGTaGACACAGACAGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: KTHLDTWPEGGVRHMWILNSFIQ*TQTALE
Trigger: CTCCAAGGCTGTCTGTGTCCACTGTATGAATGAGTT...TAATATCCACATGTGCCTTACTCCTCCTTCAGGCCAGGTGTCAAGGTGCGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp AAAACGCACCTTGACACCTGGCCTGAAGGAGGAGTAAGGCACATGTGGATATTAAGCCAAAGTGGCATATaGAGAGTTTGCCAAACTTGC +
Preference number: 4 (lower is better)
Translates to: KTHLDTWPEGGVRHMWILSQSGI*RVCQTC
Trigger: GCAAGTTTGGCAAACTCTCCATATGCCACTTTGGCT...TAATATCCACATGTGCCTTACTCCTCCTTCAGGCCAGGTGTCAAGGTGCGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp AAAACCTGGATCCAATTTCAAGGGGCTCATGATAAGTGGGATATCTCTGAGTTATTTTCTGGACAAGTCTaGCAGGCGAGAGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: KTWIQFQGAHDKWDISELFSGQV*QARAQC
Trigger: GCACTGTGCTCTCGCCTGTCAGACTTGTCCAGAAAA...TAACTCAGAGATATCCCACTTATCATGAGCCCCTTGAAATTGGATCCAGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp ATAGCTTTATTGTATAGAGATGCAAAAAGTAAACCAGAGGCATGGAGATTGGATGTTTCTTGCCCCTGCTaGTGGTCCGGCCACAGTGCA +
Preference number: 4 (lower is better)
Translates to: IALLYRDAKSKPEAWRLDVSCPC*WSGHSA
Trigger: TGCACTGTGGCCGGACCATCAGCAGGGGCAAGAAAC...ATCCAATCTCCATGCCTCTGGTTTACTTTTTGCATCTCTATACAATAAAGCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp AAAACCTGGATCCAATTTCAAGGGGCTCATGATAAGTGGGATATCTCTGAGTTACTGGAAAGAAGGCTCTaGGTCACAGCTTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: KTWIQFQGAHDKWDISELLERRL*VTASMA
Trigger: AGCCATGGAAGCTGTGACCCAGAGCCTTCTTTCCAG...TAACTCAGAGATATCCCACTTATCATGAGCCCCTTGAAATTGGATCCAGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp AAAACCTGGATCCAATTTCAAGGGGCTCATGATAAGTGGGATATCTCTGAGTTAATCATGGGGATGACCTaGCTCAGCGTAGACATGTGG +
Preference number: 4 (lower is better)
Translates to: KTWIQFQGAHDKWDISELIMGMT*LSVDMW
Trigger: CCACATGTCTACGCTGAGCCAGGTCATCCCCATGAT...TAACTCAGAGATATCCCACTTATCATGAGCCCCTTGAAATTGGATCCAGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp TATGAGATAGCTTTATTGTATAGAGATGCAAAAAGTAAACCAGAGGCATGGAGATGGGGTCATGGAGTGTaGCAGACAGGCGGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: YEIALLYRDAKSKPEAWRWGHGV*QTGGLP
Trigger: TGGCAAGCCGCCTGTCTGCCACACTCCATGACCCCA...TCTCCATGCCTCTGGTTTACTTTTTGCATCTCTATACAATAAAGCTATCTCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp GAGATGCAAAAAGTAAACCAGAGGCATGGAGATTGGATCAGCAGGCCATCTGTTACCCAGATGTGCTTTTaGGAAGAGAAAGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: EMQKVNQRHGDWISRPSVTQMCF*EEKGFC
Trigger: ACAGAAACCTTTCTCTTCCCAAAAGCACATCTGGGT...AACAGATGGCCTGCTGATCCAATCTCCATGCCTCTGGTTTACTTTTTGCATCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp AGAACTGTTCAGTCAGGATGGCTTAACCTCCACCTCCTATTTACAGGTTTCATTCTGCAGAAGCCAAAGTaGCATATGGAGAGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: RTVQSGWLNLHLLFTGFILQKPK*HMESLP
Trigger: TGGCAAACTCTCCATATGCCACTTTGGCTTCTGCAG...AATGAAACCTGTAAATAGGAGGTGGAGGTTAAGCCATCCTGACTGAACAGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp AGAACTGTTCAGTCAGGATGGCTTAACCTCCACCTCCTATTTACAGGTTTCATTCAAGTCATCAGAGGATaGCAACATGGACACATCTTC +
Preference number: 4 (lower is better)
Translates to: RTVQSGWLNLHLLFTGFIQVIRG*QHGHIF
Trigger: GAAGATGTGTCCATGTTGTCATCCTCTGATGACTTG...AATGAAACCTGTAAATAGGAGGTGGAGGTTAAGCCATCCTGACTGAACAGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp ACCTCCTATTTACAGGTTTCATTTAACAGCCACAAAAGCTGTTTTGTTGCAATTCTGCCTCCTCCTCTGTaGACAGGGAAGCTTTGTAGC +
Preference number: 4 (lower is better)
Translates to: TSYLQVSFNSHKSCFVAILPPPL*TGKLCS
Trigger: GCTACAAAGCTTCCCTGTTCACAGAGGAGGAGGCAG...AATTGCAACAAAACAGCTTTTGTGGCTGTTAAATGAAACCTGTAAATAGGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp AAAACCTGGATCCAATTTCAAGGGGCTCATGATAAGTGGGATATCTCTGAGTTAGCATCAAACAACTGGTaGCAACATCTCCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: KTWIQFQGAHDKWDISELASNNW*QHLPSS
Trigger: GGAAGAAGGGAGATGTTGGCACCAGTTGTTTGATGC...TAACTCAGAGATATCCCACTTATCATGAGCCCCTTGAAATTGGATCCAGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp AAAACCTGGATCCAATTTCAAGGGGCTCATGATAAGTGGGATATCTCTGAGTTACTTGGAGGAGCTTTCTaGAGAAGCCAAAGTGGCATA +
Preference number: 4 (lower is better)
Translates to: KTWIQFQGAHDKWDISELLGGAF*RSQSGI
Trigger: TATGCCACTTTGGCTTCTGCAGAAAGCTCCTCCAAG...TAACTCAGAGATATCCCACTTATCATGAGCCCCTTGAAATTGGATCCAGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp AAAACCTGGATCCAATTTCAAGGGGCTCATGATAAGTGGGATATCTCTGAGTTAGTCGCATCAAACAACTaGTGCCAACATCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: KTWIQFQGAHDKWDISELVASNN*CQHLPS
Trigger: AGAAGGGAGATGTTGGCACCAGTTGTTTGATGCGAC...TAACTCAGAGATATCCCACTTATCATGAGCCCCTTGAAATTGGATCCAGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp ACCTCCTATTTACAGGTTTCATTTAACAGCCACAAAAGCTGTTTTGTTGCAATTCCCAGAAAGTCCTTCTaGTTCCCAACCACCTCAGGG +
Preference number: 4 (lower is better)
Translates to: TSYLQVSFNSHKSCFVAIPRKSF*FPTTSG
Trigger: CCCTGAGGTGGTTGGGAACCAGAAGGACTTTCTGGG...AATTGCAACAAAACAGCTTTTGTGGCTGTTAAATGAAACCTGTAAATAGGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp AAAACCTGGATCCAATTTCAAGGGGCTCATGATAAGTGGGATATCTCTGAGTTATGCATGACCTCCCACTaGTCACAGCTGATCAATTCT +
Preference number: 4 (lower is better)
Translates to: KTWIQFQGAHDKWDISELCMTSH*SQLINS
Trigger: AGAATTGATCAGCTGTGACCAGTGGGAGGTCATGCA...TAACTCAGAGATATCCCACTTATCATGAGCCCCTTGAAATTGGATCCAGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp ATAGCTTTATTGTATAGAGATGCAAAAAGTAAACCAGAGGCATGGAGATTGGATCTGAGTCACAGCCATTaGAGGTGGCAGTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: IALLYRDAKSKPEAWRLDLSHSH*RWQCPL
Trigger: CAGAGGACACTGCCACCTCCAATGGCTGTGACTCAG...ATCCAATCTCCATGCCTCTGGTTTACTTTTTGCATCTCTATACAATAAAGCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp AGAACTGTTCAGTCAGGATGGCTTAACCTCCACCTCCTATTTACAGGTTTCATTCATTCTTGCCCCTACTaGACTCTTTCATACAGTATG +
Preference number: 4 (lower is better)
Translates to: RTVQSGWLNLHLLFTGFIHSCPY*TLSYSM
Trigger: CATACTGTATGAAAGAGTTCAGTAGGGGCAAGAATG...AATGAAACCTGTAAATAGGAGGTGGAGGTTAAGCCATCCTGACTGAACAGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp ATAGCTTTATTGTATAGAGATGCAAAAAGTAAACCAGAGGCATGGAGATTGGATAAGGTCTCCCACATCTaGAGGCTGTGGTGGAAGCAA +
Preference number: 4 (lower is better)
Translates to: IALLYRDAKSKPEAWRLDKVSHI*RLWWKQ
Trigger: TTGCTTCCACCACAGCCTGCAGATGTGGGAGACCTT...ATCCAATCTCCATGCCTCTGGTTTACTTTTTGCATCTCTATACAATAAAGCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp TATGAGATAGCTTTATTGTATAGAGATGCAAAAAGTAAACCAGAGGCATGGAGACAATCTGAAGGCCAATaGAAGTCACCCAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: YEIALLYRDAKSKPEAWRQSEGQ*KSPRLP
Trigger: GGGAAGCCTGGGTGACTTCCATTGGCCTTCAGATTG...TCTCCATGCCTCTGGTTTACTTTTTGCATCTCTATACAATAAAGCTATCTCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
3UTR CAA 72 bp TATAGAGATGCAAAAAGTAAACCAGAGGCATGGAGATaGGATCAGCAGGCCATCTGTTGTAAACGTGTCATA +
Preference number: 4 (lower is better)
Translates to: YRDAKSKPEAWR*DQQAICCKRVI
Trigger: TATGACACGTTTACAACAGATGGCCTGCTGATCCAATCTCCATGCCTCTGGTTTACTTTTTGCATCTCTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp AAAACCTGGATCCAATTTCAAGGGGCTCATGATAAGTGGGATATCTCTGAGTTACTGTCTCATATCCTCTaGCTCACTTTTAAAGTCCAC +
Preference number: 4 (lower is better)
Translates to: KTWIQFQGAHDKWDISELLSHIL*LTFKVH
Trigger: GTGGACTTTAAAAGTGAGTCAGAGGATATGAGACAG...TAACTCAGAGATATCCCACTTATCATGAGCCCCTTGAAATTGGATCCAGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp AAAACCTGGATCCAATTTCAAGGGGCTCATGATAAGTGGGATATCTCTGAGTTAAATCACTGTCCCCCTTaGGACAAGTTTCTTGCTTAT +
Preference number: 4 (lower is better)
Translates to: KTWIQFQGAHDKWDISELNHCPP*DKFLAY
Trigger: ATAAGCAAGAAACTTGTCCCAAGGGGGACAGTGATT...TAACTCAGAGATATCCCACTTATCATGAGCCCCTTGAAATTGGATCCAGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp TATGAGATAGCTTTATTGTATAGAGATGCAAAAAGTAAACCAGAGGCATGGAGATACAATGGAGCGATGTaGTCTCCACATGTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: YEIALLYRDAKSKPEAWRYNGAM*SPHVPD
Trigger: ATCAGGCACATGTGGAGAGCACATCGCTCCATTGTA...TCTCCATGCCTCTGGTTTACTTTTTGCATCTCTATACAATAAAGCTATCTCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp TATGAGATAGCTTTATTGTATAGAGATGCAAAAAGTAAACCAGAGGCATGGAGAGAGGGTAAAGAGTACTaGGGTTTCAAGTATTCGAGC +
Preference number: 4 (lower is better)
Translates to: YEIALLYRDAKSKPEAWREGKEY*GFKYSS
Trigger: GCTCGAATACTTGAAACCTCAGTACTCTTTACCCTC...TCTCCATGCCTCTGGTTTACTTTTTGCATCTCTATACAATAAAGCTATCTCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp ACCTCCTATTTACAGGTTTCATTTAACAGCCACAAAAGCTGTTTTGTTGCAATTGGGGAAATAAAGAAATaGTTCCAGGCTGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: TSYLQVSFNSHKSCFVAIGEIKK*FQAGDF
Trigger: GAAGTCTCCAGCCTGGAAGCATTTCTTTATTTCCCC...AATTGCAACAAAACAGCTTTTGTGGCTGTTAAATGAAACCTGTAAATAGGAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp TATGAGATAGCTTTATTGTATAGAGATGCAAAAAGTAAACCAGAGGCATGGAGAAGAGTTTGCCAAACTTaGACCCAGAAAGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: YEIALLYRDAKSKPEAWRRVCQT*TQKVLL
Trigger: CAGAAGGACTTTCTGGGTGCAAGTTTGGCAAACTCT...TCTCCATGCCTCTGGTTTACTTTTTGCATCTCTATACAATAAAGCTATCTCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp ACCTCCTATTTACAGGTTTCATTTAACAGCCACAAAAGCTGTTTTGTTGCAATTGGCATATGGAGAGTTTaGCAAACTTGCACCCAGAAA +
Preference number: 4 (lower is better)
Translates to: TSYLQVSFNSHKSCFVAIGIWRV*QTCTQK
Trigger: TTTCTGGGTGCAAGTTTGGCAAACTCTCCATATGCC...AATTGCAACAAAACAGCTTTTGTGGCTGTTAAATGAAACCTGTAAATAGGAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp ACCTCCTATTTACAGGTTTCATTTAACAGCCACAAAAGCTGTTTTGTTGCAATTGGATACCTCATTAACTaGCCTCTTCTGCTCAATCAG +
Preference number: 4 (lower is better)
Translates to: TSYLQVSFNSHKSCFVAIGYLIN*PLLLNQ
Trigger: CTGATTGAGCAGAAGAGGGCAGTTAATGAGGTATCC...AATTGCAACAAAACAGCTTTTGTGGCTGTTAAATGAAACCTGTAAATAGGAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp ATAGCTTTATTGTATAGAGATGCAAAAAGTAAACCAGAGGCATGGAGATTGGATATGAGCTTTTCAAAATaGTCCATCATGAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: IALLYRDAKSKPEAWRLDMSFSK*SIMSLG
Trigger: GCCCAGGCTCATGATGGAGCATTTTGAAAAGCTCAT...ATCCAATCTCCATGCCTCTGGTTTACTTTTTGCATCTCTATACAATAAAGCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CCA 90 bp ACCTCCTATTTACAGGTTTCATTTAACAGCCACAAAAGCTGTTTTGTTGCAATTGCAAGTCAGTTAACTTaGAGGAGCTTTCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TSYLQVSFNSHKSCFVAIASQLT*RSFLQK
Trigger: CTTCTGCAGAAAGCTCCTCCAAGTTAACTGACTTGC...AATTGCAACAAAACAGCTTTTGTGGCTGTTAAATGAAACCTGTAAATAGGAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp ACCTCCTATTTACAGGTTTCATTTAACAGCCACAAAAGCTGTTTTGTTGCAATTACAAGGGAATATGGCTaGAGGTCAAGTGCAATCATT +
Preference number: 4 (lower is better)
Translates to: TSYLQVSFNSHKSCFVAITREYG*RSSAII
Trigger: AATGATTGCACTTGACCTTCAGCCATATTCCCTTGT...AATTGCAACAAAACAGCTTTTGTGGCTGTTAAATGAAACCTGTAAATAGGAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp TATGAGATAGCTTTATTGTATAGAGATGCAAAAAGTAAACCAGAGGCATGGAGACCAGCTGCTTCTGAATaGTATTTCCACTATAGTCAC +
Preference number: 4 (lower is better)
Translates to: YEIALLYRDAKSKPEAWRPAASE*YFHYSH
Trigger: GTGACTATAGTGGAAATAGCATTCAGAAGCAGCTGG...TCTCCATGCCTCTGGTTTACTTTTTGCATCTCTATACAATAAAGCTATCTCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR GCA 90 bp ACCTCCTATTTACAGGTTTCATTTAACAGCCACAAAAGCTGTTTTGTTGCAATTAGCTCGTACTCTTTCTaGAGTTCTGCTAACTTCTCT +
Preference number: 4 (lower is better)
Translates to: TSYLQVSFNSHKSCFVAISSYSF*SSANFS
Trigger: AGAGAAGTTAGCAGAACTGCAGAAAGAGTACGAGCT...AATTGCAACAAAACAGCTTTTGTGGCTGTTAAATGAAACCTGTAAATAGGAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp TATGAGATAGCTTTATTGTATAGAGATGCAAAAAGTAAACCAGAGGCATGGAGAGAACAAATAGAAAAGTaGTTCCACAGCTTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: YEIALLYRDAKSKPEAWREQIEK*FHSFEV
Trigger: GACCTCAAAGCTGTGGAATCACTTTTCTATTTGTTC...TCTCCATGCCTCTGGTTTACTTTTTGCATCTCTATACAATAAAGCTATCTCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR TCA 90 bp ACCTCCTATTTACAGGTTTCATTTAACAGCCACAAAAGCTGTTTTGTTGCAATTAGCTTCCTTCAGATGTaGCATAATTATCTGTTTCAC +
Preference number: 4 (lower is better)
Translates to: TSYLQVSFNSHKSCFVAISFLQM*HNYLFH
Trigger: GTGAAACAGATAATTATGTCACATCTGAAGGAAGCT...AATTGCAACAAAACAGCTTTTGTGGCTGTTAAATGAAACCTGTAAATAGGAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 90 bp TCAGGAGACAGCTGGTGCCCAGGTTGGTGGGTTTCTTGCCCCTGCTaGTGGTCCGGCCACAGTGCAGGCACACCACCTTTGTTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: SGDSWCPGWWVSCPC*WSGHSAGTPPLLSL
Trigger: CAGACTCAACAAAGGTGGTGTGCCTGCACTGTGGCCGGACCATCAGCAGGGGCAAGAAACCCACCAACCTGGGCACCAGCTGTCTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 90 bp GACAGGCGAGAGCACAGTGCTAAGGTCTCCCACATCTGCAGGCTGTaGTGGAAGCAACAGAGAGGGAGGGGAAAAGGAGGACCCTGCCGA +
Preference number: 5 (lower is better)
Translates to: DRREHSAKVSHICRL*WKQQRGRGKGGPCR
Trigger: TCGGCAGGGTCCTCCTTTTCCCCTCCCTCTCTGTTGCTTCCACCACAGCCTGCAGATGTGGGAGACCTTAGCACTGTGCTCTCGCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 90 bp GCCCAGAGGCCTCCGGATGCCTGGAGAACGGGACAGAGTGGCCTCTaGGACATCATTCTTGAGTACATGGCCATGGAACCGCTGCAGATG +
Preference number: 5 (lower is better)
Translates to: AQRPPDAWRTGQSGL*DIILEYMAMEPLQM
Trigger: CATCTGCAGCGGTTCCATGGCCATGTACTCAAGAATGATGTCTCAGAGGCCACTCTGTCCCGTTCTCCAGGCATCCGGAGGCCTCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 90 bp GGGAAGCTTTGTAGCGAGGGTCCAGCAGTGTGGCAAAGATGTACCTaGGGTCATGGAGTGTGGCAGACAGGCGGCTTGCCATGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: GKLCSEGPAVWQRCT*GHGVWQTGGLPWLP
Trigger: AGGAAGCCATGGCAAGCCGCCTGTCTGCCACACTCCATGACCCCAGGTACATCTTTGCCACACTGCTGGACCCTCGCTACAAAGCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CAA 90 bp GCAGGTAGCCCCAGATGCCTGGTCTGGTGTCCTACATGGCCCTGCCAGGCAAGTTCAGGGGATGGGATCTaGGGAGCCATTTTCTGGACA +
Preference number: 5 (lower is better)
Translates to: AGSPRCLVWCPTWPCQASSGDGI*GAIFWT
Trigger: TGTCCAGAAAATGGCTCCCAAGATCCCATCCCCTGA...ACTTGCCTGGCAGGGCCATGTAGGACACCAGACCAGGCATCTGGGGCTACCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CAA 90 bp GCCAGGCAAGTCAGCCCTGGTACAATAGCTAGCACTCTGAAGCACGTTTCCAGTGGTGGGATGCCTGTGTaGCCCCCGTTCTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: ARQVSPGTIASTLKHVSSGGMPV*PPFSCS
Trigger: ACTGCAGGAGAACGGGGGCAACACAGGCATCCCACC...ACTGGAAACGTGCTTCAGAGTGCTAGCTATTGTACCAGGGCTGACTTGCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 90 bp AGAGTCATAGAACTTCTCTGTGGAGTCACGGAAAGAGGAAGGCCCTaGGAGCTCTATGCCCAGAGGCCTCCGGATGCCTGGAGAACGGGA +
Preference number: 5 (lower is better)
Translates to: RVIELLCGVTERGRP*ELYAQRPPDAWRTG
Trigger: TCCCGTTCTCCAGGCATCCGGAGGCCTCTGGGCATAGAGCTCTCAGGGCCTTCCTCTTTCCGTGACTCCACAGAGAAGTTCTATGACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 90 bp GACAAGTCTGACAGGCGAGAGCACAGTGCTAAGGTCTCCCACATCTaGAGGCTGTGGTGGAAGCAACAGAGAGGGAGGGGAAAAGGAGGA +
Preference number: 5 (lower is better)
Translates to: DKSDRREHSAKVSHI*RLWWKQQRGRGKGG
Trigger: TCCTCCTTTTCCCCTCCCTCTCTGTTGCTTCCACCACAGCCTGCAGATGTGGGAGACCTTAGCACTGTGCTCTCGCCTGTCAGACTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 90 bp GATGCCTGTGTTGCCCCCGTTCTCCTGCAGTACAATGGAGCGATGTaGTCTCCACATGTGCCTGATGAGGCAGCTTGTACCCAGGTCCTT +
Preference number: 5 (lower is better)
Translates to: DACVAPVLLQYNGAM*SPHVPDEAACTQVL
Trigger: AAGGACCTGGGTACAAGCTGCCTCATCAGGCACATGTGGAGAGCACATCGCTCCATTGTACTGCAGGAGAACGGGGGCAACACAGGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 90 bp GGCATAGGGTACAATGGTGGGATGCCTGTGTTGCCCCCGTTCTCCTaGAGTACAATGGAGCGATGTGCTCTCCACATGTGCCTGATGAGG +
Preference number: 5 (lower is better)
Translates to: GIGYNGGMPVLPPFS*STMERCALHMCLMR
Trigger: CCTCATCAGGCACATGTGGAGAGCACATCGCTCCATTGTACTGCAGGAGAACGGGGGCAACACAGGCATCCCACCATTGTACCCTATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 90 bp GGAGAACGGGACAGAGTGGCCTCTGAGACATCATTCTTGAGTACATaGCCATGGAACCGCTGCAGATGTCTCAGGAGACAGCTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: GERDRVASETSFLST*PWNRCRCLRRQLVP
Trigger: GGGCACCAGCTGTCTCCTGAGACATCTGCAGCGGTTCCATGGCCATGTACTCAAGAATGATGTCTCAGAGGCCACTCTGTCCCGTTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 90 bp CAGCTAAGAACTTCCCAGAGGGCTGACAGGCACAGCTCGCTGCCCTaGTGTCTGCCTGTTCATCGCCACTGTCTGTCTGTCTCATATCCT +
Preference number: 5 (lower is better)
Translates to: QLRTSQRADRHSSLP*CLPVHRHCLSVSYP
Trigger: AGGATATGAGACAGACAGACAGTGGCGATGAACAGGCAGACATCAGGGCAGCGAGCTGTGCCTGTCAGCCCTCTGGGAAGTTCTTAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 90 bp GGATGCCTGGAGAACGGGACAGAGTGGCCTCTGAGACATCATTCTTaGGTACATGGCCATGGAACCGCTGCAGATGTCTCAGGAGACAGC +
Preference number: 5 (lower is better)
Translates to: GCLENGTEWPLRHHS*VHGHGTAADVSGDS
Trigger: GCTGTCTCCTGAGACATCTGCAGCGGTTCCATGGCCATGTACTCAAGAATGATGTCTCAGAGGCCACTCTGTCCCGTTCTCCAGGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 90 bp CCCCCGTTCTCCTGCAGTACAATGGAGCGATGTGCTCTCCACATGTaGCTGATGAGGCAGCTTGTACCCAGGTCCTTCCCATTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: PPFSCSTMERCALHM*LMRQLVPRSFPFFP
Trigger: AGGGAAAAATGGGAAGGACCTGGGTACAAGCTGCCTCATCAGGCACATGTGGAGAGCACATCGCTCCATTGTACTGCAGGAGAACGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 90 bp CAGCGTAGACATGTGGGCACTCATCTCTCGGCTTGCAGCATCAAATaGTCTCAGCACATGGCACACAGACTGCATGACCTCCCACTGGTC +
Preference number: 5 (lower is better)
Translates to: QRRHVGTHLSACSIK*SQHMAHRLHDLPLV
Trigger: GACCAGTGGGAGGTCATGCAGTCTGTGTGCCATGTGCTGAGACCATTTGATGCTGCAAGCCGAGAGATGAGTGCCCACATGTCTACGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CAA 90 bp GCAGGTAGCCCCAGATGCCTGGTCTGGTGTCCTACATGGCCCTGCCAGGCAAGTAGACTCTTCCATTATTaGGTCAGGGGATGGGATCTT +
Preference number: 5 (lower is better)
Translates to: AGSPRCLVWCPTWPCQASRLFHY*VRGWDL
Trigger: AAGATCCCATCCCCTGACCAAATAATGGAAGAGTCT...ACTTGCCTGGCAGGGCCATGTAGGACACCAGACCAGGCATCTGGGGCTACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 90 bp TGGTCCTCACAATGTGGTCGGACAGCGGATGCGAAGGTGACCCAGTaGGCTGTAAGGGTCAGGTATTCACGAGTCTGGCTACTCATCCAT +
Preference number: 5 (lower is better)
Translates to: WSSQCGRTADAKVTQ*AVRVRYSRVWLLIH
Trigger: ATGGATGAGTAGCCAGACTCGTGAATACCTGACCCTTACAGCTCACTGGGTCACCTTCGCATCCGCTGTCCGACCACATTGTGAGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 90 bp CCCAGGTTGGTGGGTTTCTTGCCCCTGCTGATGGTCCGGCCACAGTaGAGGCACACCACCTTTGTTGAGTCTGCTGAACAAATAGAAAAG +
Preference number: 5 (lower is better)
Translates to: PRLVGFLPLLMVRPQ*RHTTFVESAEQIEK
Trigger: CTTTTCTATTTGTTCAGCAGACTCAACAAAGGTGGTGTGCCTGCACTGTGGCCGGACCATCAGCAGGGGCAAGAAACCCACCAACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 90 bp GGTACATCCTGGATCAGCTGGTGCTGTGGCAGCTCGTACTCTTTCTaGAGTTCTGCTAACTTCTCTCTTGCTCTGGGTGACCGATGGACC +
Preference number: 5 (lower is better)
Translates to: GTSWISWCCGSSYSF*SSANFSLALGDRWT
Trigger: GGTCCATCGGTCACCCAGAGCAAGAGAGAAGTTAGCAGAACTGCAGAAAGAGTACGAGCTGCCACAGCACCAGCTGATCCAGGATGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 90 bp AGCATCTCCACTTTTCTGCTGAGGATGTGGATCATGGGGATGACCTaGCTCAGCGTAGACATGTGGGCACTCATCTCTCGGCTTGCAGCA +
Preference number: 5 (lower is better)
Translates to: SISTFLLRMWIMGMT*LSVDMWALISRLAA
Trigger: TGCTGCAAGCCGAGAGATGAGTGCCCACATGTCTACGCTGAGCCAGGTCATCCCCATGATCCACATCCTCAGCAGAAAAGTGGAGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 90 bp GCTTTCTGCAGAAGCCAAAGTGGCATATGGAGAGTTTGCCAAACTTaGACCCAGAAAGTCCTTCTGGTTCCCAACCACCTCAGGGTGGCG +
Preference number: 5 (lower is better)
Translates to: AFCRSQSGIWRVCQT*TQKVLLVPNHLRVA
Trigger: CGCCACCCTGAGGTGGTTGGGAACCAGAAGGACTTTCTGGGTGCAAGTTTGGCAAACTCTCCATATGCCACTTTGGCTTCTGCAGAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 90 bp TGGGCACTCATCTCTCGGCTTGCAGCATCAAATGGTCTCAGCACATaGCACACAGACTGCATGACCTCCCACTGGTCACAGCTGATCAAT +
Preference number: 5 (lower is better)
Translates to: WALISRLAASNGLST*HTDCMTSHWSQLIN
Trigger: ATTGATCAGCTGTGACCAGTGGGAGGTCATGCAGTCTGTGTGCCATGTGCTGAGACCATTTGATGCTGCAAGCCGAGAGATGAGTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CAA 90 bp GAGATGCAAAAAGTAAACCAGAGGCATGGAGATTGGATCAGCAGGCCATCTGTTTGGAGCATGGAGAGGTaGGGGGAGGAGCCTGCCAAG +
Preference number: 5 (lower is better)
Translates to: EMQKVNQRHGDWISRPSVWSMER*GEEPAK
Trigger: CTTGGCAGGCTCCTCCCCCAACCTCTCCATGCTCCA...AACAGATGGCCTGCTGATCCAATCTCCATGCCTCTGGTTTACTTTTTGCATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 90 bp CTCTGGAGAAGACACTACAGAGGCCTCCCCCAAGTCATCAGAGGATaGCAACATGGACACATCTTCCCGGGATACATCCCCAGGATTAGT +
Preference number: 5 (lower is better)
Translates to: LWRRHYRGLPQVIRG*QHGHIFPGYIPRIS
Trigger: ACTAATCCTGGGGATGTATCCCGGGAAGATGTGTCCATGTTGTCATCCTCTGATGACTTGGGGGAGGCCTCTGTAGTGTCTTCTCCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 90 bp AGCATCTTCCCTATGCTTGGATTGTCAGTGACAGTGATGCCAATCTaGAGGCCAATGGAAGTCACCCAGGCTTCCCACCAACACTCCAGC +
Preference number: 5 (lower is better)
Translates to: SIFPMLGLSVTVMPI*RPMEVTQASHQHSS
Trigger: GCTGGAGTGTTGGTGGGAAGCCTGGGTGACTTCCATTGGCCTTCAGATTGGCATCACTGTCACTGACAATCCAAGCATAGGGAAGATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 90 bp AAACTTGCACCCAGAAAGTCCTTCTGGTTCCCAACCACCTCAGGGTaGCGTCTGTACAGGTGTCGCATCAAACAACTGGTGCCAACATCT +
Preference number: 5 (lower is better)
Translates to: KLAPRKSFWFPTTSG*RLYRCRIKQLVPTS
Trigger: AGATGTTGGCACCAGTTGTTTGATGCGACACCTGTACAGACGCCACCCTGAGGTGGTTGGGAACCAGAAGGACTTTCTGGGTGCAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CAA 90 bp CCAGGCAAACTCAGACCGAGCCCACACAGTATTTCAACACAACATTTGTTTTCTTGGCAGACAGGCGGCTaGCCATGGCTTCCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: PGKLRPSPHSISTQHLFSWQTGG*PWLPSG
Trigger: CCCTGAAGGAAGCCATGGCAAGCCGCCTGTCTGCCA...AGAAAACAAATGTTGTGTTGAAATACTGTGTGGGCTCGGTCTGAGTTTGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 90 bp TCCTCCAAATACGCAAGCACCATGTCTTCAGGTAGCTTCTCTCTCTaGTCTCTCTTTATCGGTGCGAGTGACCACAGGCTCTCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: SSKYASTMSSGSFSL*SLFIGASDHRLSSV
Trigger: CACAGAGGAGAGCCTGTGGTCACTCGCACCGATAAAGAGAGATCAGAGAGAGAAGCTACCTGAAGACATGGTGCTTGCGTATTTGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 90 bp CTTGGAGGAGCTTTCTGCAGAAGCCAAAGTGGCATATGGAGAGTTTaGCAAACTTGCACCCAGAAAGTCCTTCTGGTTCCCAACCACCTC +
Preference number: 5 (lower is better)
Translates to: LGGAFCRSQSGIWRV*QTCTQKVLLVPNHL
Trigger: GAGGTGGTTGGGAACCAGAAGGACTTTCTGGGTGCAAGTTTGGCAAACTCTCCATATGCCACTTTGGCTTCTGCAGAAAGCTCCTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 90 bp TGGAACGATGTGCTCCACTTAGACGGTACATCCTGGATCAGCTGGTaGTGTGGCAGCTCGTACTCTTTCTGCAGTTCTGCTAACTTCTCT +
Preference number: 5 (lower is better)
Translates to: WNDVLHLDGTSWISW*CGSSYSFCSSANFS
Trigger: AGAGAAGTTAGCAGAACTGCAGAAAGAGTACGAGCTGCCACAGCACCAGCTGATCCAGGATGTACCGTCTAAGTGGAGCACATCGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 90 bp AGCTTATGTGTCGACTGGAAAGAAGGCTCTGGGTCACAGCTTCCATaGCTACGCTGTACAGTGTGCTACTATACTGGGAGAAGAGTGAGC +
Preference number: 5 (lower is better)
Translates to: SLCVDWKEGSGSQLP*LRCTVCYYTGRRVS
Trigger: GCTCACTCTTCTCCCAGTATAGTAGCACACTGTACAGCGTAGCCATGGAAGCTGTGACCCAGAGCCTTCTTTCCAGTCGACACATAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 90 bp GGAGACTTCTTCCTGGAGCTTATGTGTCGACTGGAAAGAAGGCTCTaGGTCACAGCTTCCATGGCTACGCTGTACAGTGTGCTACTATAC +
Preference number: 5 (lower is better)
Translates to: GDFFLELMCRLERRL*VTASMATLYSVLLY
Trigger: GTATAGTAGCACACTGTACAGCGTAGCCATGGAAGCTGTGACCCAGAGCCTTCTTTCCAGTCGACACATAAGCTCCAGGAAGAAGTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 90 bp TGGACCCAGATGTGCTTTTGGGAAGAGAAAGGTTTCTGTCTGCCATaGTTTCTGAAGCGTCGTCATAATGGAGCATGGAGAGGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: WTQMCFWEEKGFCLP*FLKRRHNGAWRGWG
Trigger: CCCCCAACCTCTCCATGCTCCATTATGACGACGCTTCAGAAACCATGGCAGACAGAAACCTTTCTCTTCCCAAAAGCACATCTGGGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 90 bp ATGTGGAACGATGTGCTCCACTTAGACGGTACATCCTGGATCAGCTaGTGCTGTGGCAGCTCGTACTCTTTCTGCAGTTCTGCTAACTTC +
Preference number: 5 (lower is better)
Translates to: MWNDVLHLDGTSWIS*CCGSSYSFCSSANF
Trigger: GAAGTTAGCAGAACTGCAGAAAGAGTACGAGCTGCCACAGCACCAGCTGATCCAGGATGTACCGTCTAAGTGGAGCACATCGTTCCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 90 bp ATCCTCTGGCTCTTGATAGCCTCGCTCACAATCAGATTCACTGTGTaGCTGAAGCACTGCACACTTGAGTGTTCACCCTCACTCAGCATC +
Preference number: 5 (lower is better)
Translates to: ILWLLIASLTIRFTV*LKHCTLECSPSLSI
Trigger: GATGCTGAGTGAGGGTGAACACTCAAGTGTGCAGTGCTTCAGTCACACAGTGAATCTGATTGTGAGCGAGGCTATCAAGAGCCAGAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 90 bp TCTCGGCTTGCAGCATCAAATGGTCTCAGCACATGGCACACAGACTaGATGACCTCCCACTGGTCACAGCTGATCAATTCTCTGAAGTTA +
Preference number: 5 (lower is better)
Translates to: SRLAASNGLSTWHTD*MTSHWSQLINSLKL
Trigger: TAACTTCAGAGAATTGATCAGCTGTGACCAGTGGGAGGTCATGCAGTCTGTGTGCCATGTGCTGAGACCATTTGATGCTGCAAGCCGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CAA 90 bp AAAACCTGGATCCAATTTCAAGGGGCTCATGATAAGTGGGATATCTCTGAGTTACAGCTGGTGCCCAGGTaGGTGGGTTTCTTGCCCCTG +
Preference number: 5 (lower is better)
Translates to: KTWIQFQGAHDKWDISELQLVPR*VGFLPL
Trigger: CAGGGGCAAGAAACCCACCAACCTGGGCACCAGCTG...TAACTCAGAGATATCCCACTTATCATGAGCCCCTTGAAATTGGATCCAGGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CAA 90 bp CCAGGCAAACTCAGACCGAGCCCACACAGTATTTCAACACAACATTTGTTTTCTCCTGAGTCACAGCCATaGGAGGTGGCAGTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: PGKLRPSPHSISTQHLFSPESQP*EVAVSS
Trigger: AGAGGACACTGCCACCTCCAATGGCTGTGACTCAGG...AGAAAACAAATGTTGTGTTGAAATACTGTGTGGGCTCGGTCTGAGTTTGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 90 bp CTCGCTCACAATCAGATTCACTGTGTGACTGAAGCACTGCACACTTaGGTGTTCACCCTCACTCAGCATCTTCCCTATGCTTGGATTGTC +
Preference number: 5 (lower is better)
Translates to: LAHNQIHCVTEALHT*VFTLTQHLPYAWIV
Trigger: GACAATCCAAGCATAGGGAAGATGCTGAGTGAGGGTGAACACTCAAGTGTGCAGTGCTTCAGTCACACAGTGAATCTGATTGTGAGCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CAA 90 bp GAGATGCAAAAAGTAAACCAGAGGCATGGAGATTGGATCAGCAGGCCATCTGTTCTGCTAACTTCTCTCTaGCTCTGGGTGACCGATGGA +
Preference number: 5 (lower is better)
Translates to: EMQKVNQRHGDWISRPSVLLTSL*LWVTDG
Trigger: TCCATCGGTCACCCAGAGCAAGAGAGAAGTTAGCAG...AACAGATGGCCTGCTGATCCAATCTCCATGCCTCTGGTTTACTTTTTGCATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 90 bp TACCGGCACACTGCTTTGAGACTGTCCATGGGGGCCAGGGAAAAGTaGTGCCAGACTTCTGACTTTAGTCTTCTCATCACCTTCTTATTT +
Preference number: 5 (lower is better)
Translates to: YRHTALRLSMGAREK*CQTSDFSLLITFLF
Trigger: AAATAAGAAGGTGATGAGAAGACTAAAGTCAGAAGTCTGGCATCACTTTTCCCTGGCCCCCATGGACAGTCTCAAAGCAGTGTGCCGGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 90 bp AGCCTTAGTGCTATCTCGAGGGGAAATAAAGAAATGCTTCCAGGCTaGAGACTTCTTCCTGGAGCTTATGTGTCGACTGGAAAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: SLSAISRGNKEMLPG*RLLPGAYVSTGKKA
Trigger: AGCCTTCTTTCCAGTCGACACATAAGCTCCAGGAAGAAGTCTCCAGCCTGGAAGCATTTCTTTATTTCCCCTCGAGATAGCACTAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 90 bp AGAAGAAACTACAGTCACAGACTCTTCCATTATTTGGTCAGGGGATaGGATCTTGGGAGCCATTTTCTGGACAAGTCTGACAGGCGAGAG +
Preference number: 5 (lower is better)
Translates to: RRNYSHRLFHYLVRG*DLGSHFLDKSDRRE
Trigger: CTCTCGCCTGTCAGACTTGTCCAGAAAATGGCTCCCAAGATCCCATCCCCTGACCAAATAATGGAAGAGTCTGTGACTGTAGTTTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CAA 90 bp GCCAGGCAAGTCAGCCCTGGTACAATAGCTAGCACTCTGAAGCACGTTTCCAGTACTTTTAAAGTCCACTaGTTCCAAACTGTGACAAGG +
Preference number: 5 (lower is better)
Translates to: ARQVSPGTIASTLKHVSSTFKVH*FQTVTR
Trigger: CCTTGTCACAGTTTGGAACAAGTGGACTTTAAAAGT...ACTGGAAACGTGCTTCAGAGTGCTAGCTATTGTACCAGGGCTGACTTGCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CAA 90 bp AAAACGCACCTTGACACCTGGCCTGAAGGAGGAGTAAGGCACATGTGGATATTATGGCATATGGAGAGTTaGCCAAACTTGCACCCAGAA +
Preference number: 5 (lower is better)
Translates to: KTHLDTWPEGGVRHMWILWHMES*PNLHPE
Trigger: TTCTGGGTGCAAGTTTGGCAAACTCTCCATATGCCA...TAATATCCACATGTGCCTTACTCCTCCTTCAGGCCAGGTGTCAAGGTGCGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CAA 90 bp GCCAGGCAAGTCAGCCCTGGTACAATAGCTAGCACTCTGAAGCACGTTTCCAGTAGCTTTGAGGTCTTCTaGCTATTAGTAGGAAACACA +
Preference number: 5 (lower is better)
Translates to: ARQVSPGTIASTLKHVSSSFEVF*LLVGNT
Trigger: TGTGTTTCCTACTAATAGCAAGAAGACCTCAAAGCT...ACTGGAAACGTGCTTCAGAGTGCTAGCTATTGTACCAGGGCTGACTTGCCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 90 bp TATGTGCAGATAGCCTTAGTGCTATCTCGAGGGGAAATAAAGAAATaGTTCCAGGCTGGAGACTTCTTCCTGGAGCTTATGTGTCGACTG +
Preference number: 5 (lower is better)
Translates to: YVQIALVLSRGEIKK*FQAGDFFLELMCRL
Trigger: CAGTCGACACATAAGCTCCAGGAAGAAGTCTCCAGCCTGGAAGCATTTCTTTATTTCCCCTCGAGATAGCACTAAGGCTATCTGCACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 90 bp GATGTCTGCCTGTTCATCGCCACTGTCTGTCTGTCTCATATCCTCTaGCTCACTTTTAAAGTCCACTTGTTCCAAACTGTGACAAGGAGT +
Preference number: 5 (lower is better)
Translates to: DVCLFIATVCLSHIL*LTFKVHLFQTVTRS
Trigger: ACTCCTTGTCACAGTTTGGAACAAGTGGACTTTAAAAGTGAGTCAGAGGATATGAGACAGACAGACAGTGGCGATGAACAGGCAGACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 90 bp TGGAAGTCACCCAGGCTTCCCACCAACACTCCAGCTGCTTCTGAATaGTATTTCCACTATAGTCACAGTCGATTTGTGAGACATCTAAAA +
Preference number: 5 (lower is better)
Translates to: WKSPRLPTNTPAASE*YFHYSHSRFVRHLK
Trigger: TTTTAGATGTCTCACAAATCGACTGTGACTATAGTGGAAATAGCATTCAGAAGCAGCTGGAGTGTTGGTGGGAAGCCTGGGTGACTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 90 bp GACAACTCTTCAGAAGAAACTACAGTCACAGACTCTTCCATTATTTaGTCAGGGGATGGGATCTTGGGAGCCATTTTCTGGACAAGTCTG +
Preference number: 5 (lower is better)
Translates to: DNSSEETTVTDSSII*SGDGILGAIFWTSL
Trigger: CAGACTTGTCCAGAAAATGGCTCCCAAGATCCCATCCCCTGACCAAATAATGGAAGAGTCTGTGACTGTAGTTTCTTCTGAAGAGTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CAA 90 bp AAAACCTGGATCCAATTTCAAGGGGCTCATGATAAGTGGGATATCTCTGAGTTAGCAGAAGGGGACTCTTaGACTTGTTTGCCTGGAGAC +
Preference number: 5 (lower is better)
Translates to: KTWIQFQGAHDKWDISELAEGDS*TCLPGD
Trigger: GTCTCCAGGCAAACAAGTCAAAGAGTCCCCTTCTGC...TAACTCAGAGATATCCCACTTATCATGAGCCCCTTGAAATTGGATCCAGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CAA 90 bp ACCTCCTATTTACAGGTTTCATTTAACAGCCACAAAAGCTGTTTTGTTGCAATTTACCGGCACACTGCTTaGAGACTGTCCATGGGGGCC +
Preference number: 5 (lower is better)
Translates to: TSYLQVSFNSHKSCFVAIYRHTA*RLSMGA
Trigger: GGCCCCCATGGACAGTCTCAAAGCAGTGTGCCGGTA...AATTGCAACAAAACAGCTTTTGTGGCTGTTAAATGAAACCTGTAAATAGGAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CAA 90 bp ATAGCTTTATTGTATAGAGATGCAAAAAGTAAACCAGAGGCATGGAGATTGGATAGGTTGGTGGGTTTCTaGCCCCTGCTGATGGTCCGG +
Preference number: 5 (lower is better)
Translates to: IALLYRDAKSKPEAWRLDRLVGF*PLLMVR
Trigger: CCGGACCATCAGCAGGGGCAAGAAACCCACCAACCT...ATCCAATCTCCATGCCTCTGGTTTACTTTTTGCATCTCTATACAATAAAGCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CAA 90 bp AAAACCTGGATCCAATTTCAAGGGGCTCATGATAAGTGGGATATCTCTGAGTTAACCATCCTCTGGCTCTaGATAGCCTCGCTCACAATC +
Preference number: 5 (lower is better)
Translates to: KTWIQFQGAHDKWDISELTILWL*IASLTI
Trigger: GATTGTGAGCGAGGCTATCAAGAGCCAGAGGATGGT...TAACTCAGAGATATCCCACTTATCATGAGCCCCTTGAAATTGGATCCAGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 90 bp AGGTATTCACGAGTCTGGCTACTCATCCATATTCCAGAGGTGAAGTaGACCACACCACTCTCAGCTTCCTTCAGATGTGACATAATTATC +
Preference number: 5 (lower is better)
Translates to: RYSRVWLLIHIPEVK*TTPLSASFRCDIII
Trigger: GATAATTATGTCACATCTGAAGGAAGCTGAGAGTGGTGTGGTTCACTTCACCTCTGGAATATGGATGAGTAGCCAGACTCGTGAATACCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 90 bp GCTGATCAATTCTCTGAAGTTACACTCAATGGATACCTCATTAACTaGCCTCTTCTGCTCAATCAGACGTTCGAGCATGTGGAACGATGT +
Preference number: 5 (lower is better)
Translates to: ADQFSEVTLNGYLIN*PLLLNQTFEHVERC
Trigger: ACATCGTTCCACATGCTCGAACGTCTGATTGAGCAGAAGAGGGCAGTTAATGAGGTATCCATTGAGTGTAACTTCAGAGAATTGATCAGC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 90 bp TCCAGAGGTGAAGTGAACCACACCACTCTCAGCTTCCTTCAGATGTaGCATAATTATCTGTTTCACATTGTCATACATACCTGGGATAGC +
Preference number: 5 (lower is better)
Translates to: SRGEVNHTTLSFLQM*HNYLFHIVIHTWDS
Trigger: GCTATCCCAGGTATGTATGACAATGTGAAACAGATAATTATGTCACATCTGAAGGAAGCTGAGAGTGGTGTGGTTCACTTCACCTCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CAA 90 bp TATGAGATAGCTTTATTGTATAGAGATGCAAAAAGTAAACCAGAGGCATGGAGAGACTCTTTGACTTGTTaGCCTGGAGACAACGATGCG +
Preference number: 5 (lower is better)
Translates to: YEIALLYRDAKSKPEAWRDSLTC*PGDNDA
Trigger: CGCATCGTTGTCTCCAGGCAAACAAGTCAAAGAGTC...TCTCCATGCCTCTGGTTTACTTTTTGCATCTCTATACAATAAAGCTATCTCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CAA 90 bp TATGAGATAGCTTTATTGTATAGAGATGCAAAAAGTAAACCAGAGGCATGGAGAGGCAAGTCAGTTAACTaGGAGGAGCTTTCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: YEIALLYRDAKSKPEAWRGKSVN*EELSAE
Trigger: TTCTGCAGAAAGCTCCTCCAAGTTAACTGACTTGCC...TCTCCATGCCTCTGGTTTACTTTTTGCATCTCTATACAATAAAGCTATCTCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CAA 90 bp ACCTCCTATTTACAGGTTTCATTTAACAGCCACAAAAGCTGTTTTGTTGCAATTACTGTGACAAGGAGTTaGATCATCATCTTCCTCCGT +
Preference number: 5 (lower is better)
Translates to: TSYLQVSFNSHKSCFVAITVTRS*IIIFLR
Trigger: ACGGAGGAAGATGATGATCAAACTCCTTGTCACAGT...AATTGCAACAAAACAGCTTTTGTGGCTGTTAAATGAAACCTGTAAATAGGAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS-3UTR CAA 90 bp ACCTCCTATTTACAGGTTTCATTTAACAGCCACAAAAGCTGTTTTGTTGCAATTCTGTTAAAGCCAACGTaGTCTACAAGGGAATATGGC +
Preference number: 5 (lower is better)
Translates to: TSYLQVSFNSHKSCFVAILLKPT*STREYG
Trigger: GCCATATTCCCTTGTAGACAACGTTGGCTTTAACAG...AATTGCAACAAAACAGCTTTTGTGGCTGTTAAATGAAACCTGTAAATAGGAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CAA 72 bp CTCAGGAGACAGCTGGTGCCCAGGTTGGTGGGTTTCTaGCCCCTGCTGATGGTCCGGCCACAGTGCAGGCAC +
Preference number: 6 (lower is better)
Translates to: LRRQLVPRLVGF*PLLMVRPQCRH
Trigger: GTGCCTGCACTGTGGCCGGACCATCAGCAGGGGCAAGAAACCCACCAACCTGGGCACCAGCTGTCTCCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 72 bp AGCTGGTGCCCAGGTTGGTGGGTTTCTTGCCCCTGCTaGTGGTCCGGCCACAGTGCAGGCACACCACCTTTG +
Preference number: 6 (lower is better)
Translates to: SWCPGWWVSCPC*WSGHSAGTPPL
Trigger: CAAAGGTGGTGTGCCTGCACTGTGGCCGGACCATCAGCAGGGGCAAGAAACCCACCAACCTGGGCACCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 72 bp AAGGCCCTGAGAGCTCTATGCCCAGAGGCCTCCGGATaGCTGGAGAACGGGACAGAGTGGCCTCTGAGACAT +
Preference number: 6 (lower is better)
Translates to: KALRALCPEASG*LENGTEWPLRH
Trigger: ATGTCTCAGAGGCCACTCTGTCCCGTTCTCCAGGCATCCGGAGGCCTCTGGGCATAGAGCTCTCAGGGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 72 bp GGGTCCAGCAGTGTGGCAAAGATGTACCTGGGGTCATaGAGTGTGGCAGACAGGCGGCTTGCCATGGCTTCC +
Preference number: 6 (lower is better)
Translates to: GSSSVAKMYLGS*SVADRRLAMAS
Trigger: GGAAGCCATGGCAAGCCGCCTGTCTGCCACACTCCATGACCCCAGGTACATCTTTGCCACACTGCTGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CAA 90 bp TGCAGATGTCTCAGGAGACAGCTGGTGCCCAGGTTGGTGGGTTTCTaGCCCCTGCTGATGGTCCGGCCACAGTGCAGGCACACCACCTTT +
Preference number: 6 (lower is better)
Translates to: CRCLRRQLVPRLVGF*PLLMVRPQCRHTTF
Trigger: AAAGGTGGTGTGCCTGCACTGTGGCCGGACCATCAGCAGGGGCAAGAAACCCACCAACCTGGGCACCAGCTGTCTCCTGAGACATCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 72 bp ACTTCCCAGAGGGCTGACAGGCACAGCTCGCTGCCCTaGTGTCTGCCTGTTCATCGCCACTGTCTGTCTGTC +
Preference number: 6 (lower is better)
Translates to: TSQRADRHSSLP*CLPVHRHCLSV
Trigger: GACAGACAGACAGTGGCGATGAACAGGCAGACATCAGGGCAGCGAGCTGTGCCTGTCAGCCCTCTGGGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 72 bp GAACTTCTCTGTGGAGTCACGGAAAGAGGAAGGCCCTaGGAGCTCTATGCCCAGAGGCCTCCGGATGCCTGG +
Preference number: 6 (lower is better)
Translates to: ELLCGVTERGRP*ELYAQRPPDAW
Trigger: CCAGGCATCCGGAGGCCTCTGGGCATAGAGCTCTCAGGGCCTTCCTCTTTCCGTGACTCCACAGAGAAGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 72 bp GACAGGCGAGAGCACAGTGCTAAGGTCTCCCACATCTaGAGGCTGTGGTGGAAGCAACAGAGAGGGAGGGGA +
Preference number: 6 (lower is better)
Translates to: DRREHSAKVSHI*RLWWKQQRGRG
Trigger: TCCCCTCCCTCTCTGTTGCTTCCACCACAGCCTGCAGATGTGGGAGACCTTAGCACTGTGCTCTCGCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 72 bp GCAGTGTGGCAAAGATGTACCTGGGGTCATGGAGTGTaGCAGACAGGCGGCTTGCCATGGCTTCCTTCAGGG +
Preference number: 6 (lower is better)
Translates to: AVWQRCTWGHGV*QTGGLPWLPSG
Trigger: CCCTGAAGGAAGCCATGGCAAGCCGCCTGTCTGCCACACTCCATGACCCCAGGTACATCTTTGCCACACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 72 bp TGTAGCGAGGGTCCAGCAGTGTGGCAAAGATGTACCTaGGGTCATGGAGTGTGGCAGACAGGCGGCTTGCCA +
Preference number: 6 (lower is better)
Translates to: CSEGPAVWQRCT*GHGVWQTGGLP
Trigger: TGGCAAGCCGCCTGTCTGCCACACTCCATGACCCCAGGTACATCTTTGCCACACTGCTGGACCCTCGCTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CAA 72 bp TCTTTGACTTGTTTGCCTGGAGACAACGATGCGGAGTaGAGATCCCCTTCTGGGGGCAGCAGGGCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: SLTCLPGDNDAE*RSPSGGSRAGS
Trigger: GCTGCCTGCCCTGCTGCCCCCAGAAGGGGATCTCAACTCCGCATCGTTGTCTCCAGGCAAACAAGTCAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 72 bp CCTCCGGATGCCTGGAGAACGGGACAGAGTGGCCTCTaGGACATCATTCTTGAGTACATGGCCATGGAACCG +
Preference number: 6 (lower is better)
Translates to: PPDAWRTGQSGL*DIILEYMAMEP
Trigger: CGGTTCCATGGCCATGTACTCAAGAATGATGTCTCAGAGGCCACTCTGTCCCGTTCTCCAGGCATCCGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 72 bp AGAGGGCTGACAGGCACAGCTCGCTGCCCTGATGTCTaGCTGTTCATCGCCACTGTCTGTCTGTCTCATATC +
Preference number: 6 (lower is better)
Translates to: RGLTGTARCPDV*LFIATVCLSHI
Trigger: GATATGAGACAGACAGACAGTGGCGATGAACAGGCAGACATCAGGGCAGCGAGCTGTGCCTGTCAGCCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 72 bp GTGGGTTTCTTGCCCCTGCTGATGGTCCGGCCACAGTaGAGGCACACCACCTTTGTTGAGTCTGCTGAACAA +
Preference number: 6 (lower is better)
Translates to: VGFLPLLMVRPQ*RHTTFVESAEQ
Trigger: TTGTTCAGCAGACTCAACAAAGGTGGTGTGCCTGCACTGTGGCCGGACCATCAGCAGGGGCAAGAAACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 72 bp GCAATGGTGGTCCTCACAATGTGGTCGGACAGCGGATaGGAAGGTGACCCAGTGAGCTGTAAGGGTCAGGTA +
Preference number: 6 (lower is better)
Translates to: AMVVLTMWSDSG*EGDPVSCKGQV
Trigger: TACCTGACCCTTACAGCTCACTGGGTCACCTTCGCATCCGCTGTCCGACCACATTGTGAGGACCACCATTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 72 bp GAGCACAGTGCTAAGGTCTCCCACATCTGCAGGCTGTaGTGGAAGCAACAGAGAGGGAGGGGAAAAGGAGGA +
Preference number: 6 (lower is better)
Translates to: EHSAKVSHICRL*WKQQRGRGKGG
Trigger: TCCTCCTTTTCCCCTCCCTCTCTGTTGCTTCCACCACAGCCTGCAGATGTGGGAGACCTTAGCACTGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CAA 90 bp CGGATGCCTGGAGAACGGGACAGAGTGGCCTCTGAGACATCATTCTaGAGTACATGGCCATGGAACCGCTGCAGATGTCTCAGGAGACAG +
Preference number: 6 (lower is better)
Translates to: RMPGERDRVASETSF*STWPWNRCRCLRRQ
Trigger: CTGTCTCCTGAGACATCTGCAGCGGTTCCATGGCCATGTACTCAAGAATGATGTCTCAGAGGCCACTCTGTCCCGTTCTCCAGGCATCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 72 bp CAATGTGGTCGGACAGCGGATGCGAAGGTGACCCAGTaGGCTGTAAGGGTCAGGTATTCACGAGTCTGGCTA +
Preference number: 6 (lower is better)
Translates to: QCGRTADAKVTQ*AVRVRYSRVWL
Trigger: TAGCCAGACTCGTGAATACCTGACCCTTACAGCTCACTGGGTCACCTTCGCATCCGCTGTCCGACCACATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 72 bp GTCATAATGGAGCATGGAGAGGTTGGGGGAGGAGCCTaGCAAGGCCTCCTCTCTGCTGTACTTTTCAGTGAC +
Preference number: 6 (lower is better)
Translates to: VIMEHGEVGGGA*QGLLSAVLFSD
Trigger: GTCACTGAAAAGTACAGCAGAGAGGAGGCCTTGGCAGGCTCCTCCCCCAACCTCTCCATGCTCCATTATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 72 bp TCCTGCAGTACAATGGAGCGATGTGCTCTCCACATGTaGCTGATGAGGCAGCTTGTACCCAGGTCCTTCCCA +
Preference number: 6 (lower is better)
Translates to: SCSTMERCALHM*LMRQLVPRSFP
Trigger: TGGGAAGGACCTGGGTACAAGCTGCCTCATCAGGCACATGTGGAGAGCACATCGCTCCATTGTACTGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 72 bp TACAATGGTGGGATGCCTGTGTTGCCCCCGTTCTCCTaGAGTACAATGGAGCGATGTGCTCTCCACATGTGC +
Preference number: 6 (lower is better)
Translates to: YNGGMPVLPPFS*STMERCALHMC
Trigger: GCACATGTGGAGAGCACATCGCTCCATTGTACTGCAGGAGAACGGGGGCAACACAGGCATCCCACCATTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 72 bp CCTGATTCAAACCTTGGATTTACCGTGTCCGCTGGCTaGTTCTCTGGAGAAGACACTACAGAGGCCTCCCCC +
Preference number: 6 (lower is better)
Translates to: PDSNLGFTVSAG*FSGEDTTEASP
Trigger: GGGGGAGGCCTCTGTAGTGTCTTCTCCAGAGAAGCAGCCAGCGGACACGGTAAATCCAAGGTTTGAATCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 72 bp CCCAGAAAGTCCTTCTGGTTCCCAACCACCTCAGGGTaGCGTCTGTACAGGTGTCGCATCAAACAACTGGTG +
Preference number: 6 (lower is better)
Translates to: PRKSFWFPTTSG*RLYRCRIKQLV
Trigger: CACCAGTTGTTTGATGCGACACCTGTACAGACGCCACCCTGAGGTGGTTGGGAACCAGAAGGACTTTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 72 bp ACTCTTTCTGCAGTTCTGCTAACTTCTCTCTTGCTCTaGGTGACCGATGGACCCGCTCACACAGCTTCCGGG +
Preference number: 6 (lower is better)
Translates to: TLSAVLLTSLLL*VTDGPAHTASG
Trigger: CCCGGAAGCTGTGTGAGCGGGTCCATCGGTCACCCAGAGCAAGAGAGAAGTTAGCAGAACTGCAGAAAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 72 bp AGACACTACAGAGGCCTCCCCCAAGTCATCAGAGGATaGCAACATGGACACATCTTCCCGGGATACATCCCC +
Preference number: 6 (lower is better)
Translates to: RHYRGLPQVIRG*QHGHIFPGYIP
Trigger: GGGGATGTATCCCGGGAAGATGTGTCCATGTTGTCATCCTCTGATGACTTGGGGGAGGCCTCTGTAGTGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 72 bp AAACCTTGGATTTACCGTGTCCGCTGGCTGCTTCTCTaGAGAAGACACTACAGAGGCCTCCCCCAAGTCATC +
Preference number: 6 (lower is better)
Translates to: KPWIYRVRWLLL*RRHYRGLPQVI
Trigger: GATGACTTGGGGGAGGCCTCTGTAGTGTCTTCTCCAGAGAAGCAGCCAGCGGACACGGTAAATCCAAGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 72 bp AGTTCTGCTAACTTCTCTCTTGCTCTGGGTGACCGATaGACCCGCTCACACAGCTTCCGGGCAATACTCAGT +
Preference number: 6 (lower is better)
Translates to: SSANFSLALGDR*TRSHSFRAILS
Trigger: ACTGAGTATTGCCCGGAAGCTGTGTGAGCGGGTCCATCGGTCACCCAGAGCAAGAGAGAAGTTAGCAGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 72 bp ATCTCTCGGCTTGCAGCATCAAATGGTCTCAGCACATaGCACACAGACTGCATGACCTCCCACTGGTCACAG +
Preference number: 6 (lower is better)
Translates to: ISRLAASNGLST*HTDCMTSHWSQ
Trigger: CTGTGACCAGTGGGAGGTCATGCAGTCTGTGTGCCATGTGCTGAGACCATTTGATGCTGCAAGCCGAGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 72 bp CATGTGGGCACTCATCTCTCGGCTTGCAGCATCAAATaGTCTCAGCACATGGCACACAGACTGCATGACCTC +
Preference number: 6 (lower is better)
Translates to: HVGTHLSACSIK*SQHMAHRLHDL
Trigger: GAGGTCATGCAGTCTGTGTGCCATGTGCTGAGACCATTTGATGCTGCAAGCCGAGAGATGAGTGCCCACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 72 bp TGGATCATGGGGATGACCTGGCTCAGCGTAGACATGTaGGCACTCATCTCTCGGCTTGCAGCATCAAATGGT +
Preference number: 6 (lower is better)
Translates to: WIMGMTWLSVDM*ALISRLAASNG
Trigger: ACCATTTGATGCTGCAAGCCGAGAGATGAGTGCCCACATGTCTACGCTGAGCCAGGTCATCCCCATGATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 72 bp ACTTTTCTGCTGAGGATGTGGATCATGGGGATGACCTaGCTCAGCGTAGACATGTGGGCACTCATCTCTCGG +
Preference number: 6 (lower is better)
Translates to: TFLLRMWIMGMT*LSVDMWALISR
Trigger: CCGAGAGATGAGTGCCCACATGTCTACGCTGAGCCAGGTCATCCCCATGATCCACATCCTCAGCAGAAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CAA 72 bp GGAGAACGGGACAGAGTGGCCTCTGAGACATCATTCTaGAGTACATGGCCATGGAACCGCTGCAGATGTCTC +
Preference number: 6 (lower is better)
Translates to: GERDRVASETSF*STWPWNRCRCL
Trigger: GAGACATCTGCAGCGGTTCCATGGCCATGTACTCAAGAATGATGTCTCAGAGGCCACTCTGTCCCGTTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 72 bp TGGATCAGCTGGTGCTGTGGCAGCTCGTACTCTTTCTaGAGTTCTGCTAACTTCTCTCTTGCTCTGGGTGAC +
Preference number: 6 (lower is better)
Translates to: WISWCCGSSYSF*SSANFSLALGD
Trigger: GTCACCCAGAGCAAGAGAGAAGTTAGCAGAACTGCAGAAAGAGTACGAGCTGCCACAGCACCAGCTGATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 72 bp GTCGACTGGAAAGAAGGCTCTGGGTCACAGCTTCCATaGCTACGCTGTACAGTGTGCTACTATACTGGGAGA +
Preference number: 6 (lower is better)
Translates to: VDWKEGSGSQLP*LRCTVCYYTGR
Trigger: TCTCCCAGTATAGTAGCACACTGTACAGCGTAGCCATGGAAGCTGTGACCCAGAGCCTTCTTTCCAGTCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 72 bp TTCCTGGAGCTTATGTGTCGACTGGAAAGAAGGCTCTaGGTCACAGCTTCCATGGCTACGCTGTACAGTGTG +
Preference number: 6 (lower is better)
Translates to: FLELMCRLERRL*VTASMATLYSV
Trigger: CACACTGTACAGCGTAGCCATGGAAGCTGTGACCCAGAGCCTTCTTTCCAGTCGACACATAAGCTCCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 72 bp AGGCTGGAGACTTCTTCCTGGAGCTTATGTGTCGACTaGAAAGAAGGCTCTGGGTCACAGCTTCCATGGCTA +
Preference number: 6 (lower is better)
Translates to: RLETSSWSLCVD*KEGSGSQLPWL
Trigger: TAGCCATGGAAGCTGTGACCCAGAGCCTTCTTTCCAGTCGACACATAAGCTCCAGGAAGAAGTCTCCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 72 bp ATTTGGTCAGGGGATGGGATCTTGGGAGCCATTTTCTaGACAAGTCTGACAGGCGAGAGCACAGTGCTAAGG +
Preference number: 6 (lower is better)
Translates to: IWSGDGILGAIF*TSLTGESTVLR
Trigger: CCTTAGCACTGTGCTCTCGCCTGTCAGACTTGTCCAGAAAATGGCTCCCAAGATCCCATCCCCTGACCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 72 bp GACAGAGTGGCCTCTGAGACATCATTCTTGAGTACATaGCCATGGAACCGCTGCAGATGTCTCAGGAGACAG +
Preference number: 6 (lower is better)
Translates to: DRVASETSFLST*PWNRCRCLRRQ
Trigger: CTGTCTCCTGAGACATCTGCAGCGGTTCCATGGCCATGTACTCAAGAATGATGTCTCAGAGGCCACTCTGTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CAA 72 bp CCAGTGTCTTTAAGTGGGGACCCTGAGTCACAGCCATaGGAGGTGGCAGTGTCCTCTGAGGTAGAATTCAGT +
Preference number: 6 (lower is better)
Translates to: PVSLSGDPESQP*EVAVSSEVEFS
Trigger: ACTGAATTCTACCTCAGAGGACACTGCCACCTCCAATGGCTGTGACTCAGGGTCCCCACTTAAAGACACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CAA 90 bp AGCTTTCTGCAGAAGCCAAAGTGGCATATGGAGAGTTTGCCAAACTaGCACCCAGAAAGTCCTTCTGGTTCCCAACCACCTCAGGGTGGC +
Preference number: 6 (lower is better)
Translates to: SFLQKPKWHMESLPN*HPESPSGSQPPQGG
Trigger: GCCACCCTGAGGTGGTTGGGAACCAGAAGGACTTTCTGGGTGCAAGTTTGGCAAACTCTCCATATGCCACTTTGGCTTCTGCAGAAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CAA 90 bp TCCTCTGTGCCAGTGTCTTTAAGTGGGGACCCTGAGTCACAGCCATaGGAGGTGGCAGTGTCCTCTGAGGTAGAATTCAGTATTTCTAGC +
Preference number: 6 (lower is better)
Translates to: SSVPVSLSGDPESQP*EVAVSSEVEFSISS
Trigger: GCTAGAAATACTGAATTCTACCTCAGAGGACACTGCCACCTCCAATGGCTGTGACTCAGGGTCCCCACTTAAAGACACTGGCACAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 72 bp CCTATGCTTGGATTGTCAGTGACAGTGATGCCAATCTaGAGGCCAATGGAAGTCACCCAGGCTTCCCACCAA +
Preference number: 6 (lower is better)
Translates to: PMLGLSVTVMPI*RPMEVTQASHQ
Trigger: TTGGTGGGAAGCCTGGGTGACTTCCATTGGCCTTCAGATTGGCATCACTGTCACTGACAATCCAAGCATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CAA 90 bp ACTACAGTCACAGACTCTTCCATTATTTGGTCAGGGGATGGGATCTaGGGAGCCATTTTCTGGACAAGTCTGACAGGCGAGAGCACAGTG +
Preference number: 6 (lower is better)
Translates to: TTVTDSSIIWSGDGI*GAIFWTSLTGESTV
Trigger: CACTGTGCTCTCGCCTGTCAGACTTGTCCAGAAAATGGCTCCCAAGATCCCATCCCCTGACCAAATAATGGAAGAGTCTGTGACTGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CAA 90 bp ACTTGGAGGAGCTTTCTGCAGAAGCCAAAGTGGCATATGGAGAGTTaGCCAAACTTGCACCCAGAAAGTCCTTCTGGTTCCCAACCACCT +
Preference number: 6 (lower is better)
Translates to: TWRSFLQKPKWHMES*PNLHPESPSGSQPP
Trigger: AGGTGGTTGGGAACCAGAAGGACTTTCTGGGTGCAAGTTTGGCAAACTCTCCATATGCCACTTTGGCTTCTGCAGAAAGCTCCTCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 72 bp ACTGCTTTGAGACTGTCCATGGGGGCCAGGGAAAAGTaGTGCCAGACTTCTGACTTTAGTCTTCTCATCACC +
Preference number: 6 (lower is better)
Translates to: TALRLSMGAREK*CQTSDFSLLIT
Trigger: GGTGATGAGAAGACTAAAGTCAGAAGTCTGGCATCACTTTTCCCTGGCCCCCATGGACAGTCTCAAAGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 72 bp AGAAGCCAAAGTGGCATATGGAGAGTTTGCCAAACTTaGACCCAGAAAGTCCTTCTGGTTCCCAACCACCTC +
Preference number: 6 (lower is better)
Translates to: RSQSGIWRVCQT*TQKVLLVPNHL
Trigger: GAGGTGGTTGGGAACCAGAAGGACTTTCTGGGTGCAAGTTTGGCAAACTCTCCATATGCCACTTTGGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 72 bp GCTTTCTGCAGAAGCCAAAGTGGCATATGGAGAGTTTaGCAAACTTGCACCCAGAAAGTCCTTCTGGTTCCC +
Preference number: 6 (lower is better)
Translates to: AFCRSQSGIWRV*QTCTQKVLLVP
Trigger: GGGAACCAGAAGGACTTTCTGGGTGCAAGTTTGGCAAACTCTCCATATGCCACTTTGGCTTCTGCAGAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 72 bp TCGATTTGTGAGACATCTAAAAGTGCTGAGCAATGGTaGTCCTCACAATGTGGTCGGACAGCGGATGCGAAG +
Preference number: 6 (lower is better)
Translates to: SICETSKSAEQW*SSQCGRTADAK
Trigger: CTTCGCATCCGCTGTCCGACCACATTGTGAGGACCACCATTGCTCAGCACTTTTAGATGTCTCACAAATCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 72 bp CTCAGCACATGGCACACAGACTGCATGACCTCCCACTaGTCACAGCTGATCAATTCTCTGAAGTTACACTCA +
Preference number: 6 (lower is better)
Translates to: LSTWHTDCMTSH*SQLINSLKLHS
Trigger: TGAGTGTAACTTCAGAGAATTGATCAGCTGTGACCAGTGGGAGGTCATGCAGTCTGTGTGCCATGTGCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CAA 72 bp CAGAAGCCAAAGTGGCATATGGAGAGTTTGCCAAACTaGCACCCAGAAAGTCCTTCTGGTTCCCAACCACCT +
Preference number: 6 (lower is better)
Translates to: QKPKWHMESLPN*HPESPSGSQPP
Trigger: AGGTGGTTGGGAACCAGAAGGACTTTCTGGGTGCAAGTTTGGCAAACTCTCCATATGCCACTTTGGCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS TCA 72 bp CTCTTGATAGCCTCGCTCACAATCAGATTCACTGTGTaGCTGAAGCACTGCACACTTGAGTGTTCACCCTCA +
Preference number: 6 (lower is better)
Translates to: LLIASLTIRFTV*LKHCTLECSPS
Trigger: TGAGGGTGAACACTCAAGTGTGCAGTGCTTCAGTCACACAGTGAATCTGATTGTGAGCGAGGCTATCAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 72 bp CCCAGGCTTCCCACCAACACTCCAGCTGCTTCTGAATaGTATTTCCACTATAGTCACAGTCGATTTGTGAGA +
Preference number: 6 (lower is better)
Translates to: PRLPTNTPAASE*YFHYSHSRFVR
Trigger: TCTCACAAATCGACTGTGACTATAGTGGAAATAGCATTCAGAAGCAGCTGGAGTGTTGGTGGGAAGCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 72 bp CTTGGAGGAGCTTTCTGCAGAAGCCAAAGTGGCATATaGAGAGTTTGCCAAACTTGCACCCAGAAAGTCCTT +
Preference number: 6 (lower is better)
Translates to: LGGAFCRSQSGI*RVCQTCTQKVL
Trigger: AAGGACTTTCTGGGTGCAAGTTTGGCAAACTCTCCATATGCCACTTTGGCTTCTGCAGAAAGCTCCTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CCA 72 bp TTTTGGCAACTGGATGAGAGTCATAGAACTTCTCTGTaGAGTCACGGAAAGAGGAAGGCCCTGAGAGCTCTA +
Preference number: 6 (lower is better)
Translates to: FWQLDESHRTSL*SHGKRKALRAL
Trigger: TAGAGCTCTCAGGGCCTTCCTCTTTCCGTGACTCCACAGAGAAGTTCTATGACTCTCATCCAGTTGCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CAA 90 bp GGACAACTCTTCAGAAGAAACTACAGTCACAGACTCTTCCATTATTaGGTCAGGGGATGGGATCTTGGGAGCCATTTTCTGGACAAGTCT +
Preference number: 6 (lower is better)
Translates to: GQLFRRNYSHRLFHY*VRGWDLGSHFLDKS
Trigger: AGACTTGTCCAGAAAATGGCTCCCAAGATCCCATCCCCTGACCAAATAATGGAAGAGTCTGTGACTGTAGTTTCTTCTGAAGAGTTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS GCA 72 bp ATAGCCTTAGTGCTATCTCGAGGGGAAATAAAGAAATaGTTCCAGGCTGGAGACTTCTTCCTGGAGCTTATG +
Preference number: 6 (lower is better)
Translates to: IALVLSRGEIKK*FQAGDFFLELM
Trigger: CATAAGCTCCAGGAAGAAGTCTCCAGCCTGGAAGCATTTCTTTATTTCCCCTCGAGATAGCACTAAGGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15
CDS CAA 72 bp GCTTCCTTCAGATGTGACATAATTATCTGTTTCACATaGTCATACATACCTGGGATAGCTGTTCTAGAGAAG +
Preference number: 6 (lower is better)
Translates to: ASFRCDIIICFT*SYIPGIAVLEK
Trigger: CTTCTCTAGAACAGCTATCCCAGGTATGTATGACAATGTGAAACAGATAATTATGTCACATCTGAAGGAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041297.15