Pregenerated sensors for ZBED3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041995Ensembl transcript IDs: ENSMUST00000045909.8, ENSMUST00000221807.2, ENSMUST00000222456.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTAGCTGTGAGGACTATCCTGTCTGTGTACCTAATCCAGGCTACTaGACTTGGGGGCGCTGCCGCGCCTGCAGCCTATGGTTAGGTTTA | + |
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Preference number: 1 (lower is better) Translates to: GSCEDYPVCVPNPGY*TWGRCRACSLWLGL Trigger: TAAACCTAACCATAGGCTGCAGGCGCGGCAGCGCCCCCAAGTCCAGTAGCCTGGATTAGGTACACAGACAGGATAGTCCTCACAGCTACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR CCA 90 bp | AAGAAGGGGCTTCAGAAGGCAGGTCAGGGCTGGGGAAGCCATGTGTaGCTTCTGGGTGCTAGCTTAGCATGCGCAGGACATGAAACAAAC | + |
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Preference number: 1 (lower is better) Translates to: KKGLQKAGQGWGSHV*LLGASLACAGHETN Trigger: GTTTGTTTCATGTCCTGCGCATGCTAAGCTAGCACCCAGAAGCCACACATGGCTTCCCCAGCCCTGACCTGCCTTCTGAAGCCCCTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR TCA 90 bp | AAGGGGTCTCTTTGGGACTGGTCCAAGGTGGGGTTCTATAGATGCTaGAGGCAGGGAGCCAGGGAGTCAGTGATACTCAAGGTTCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: KGSLWDWSKVGFYRC*RQGARESVILKVPF Trigger: GAAAGGAACCTTGAGTATCACTGACTCCCTGGCTCCCTGCCTTCAGCATCTATAGAACCCCACCTTGGACCAGTCCCAAAGAGACCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR GCA 90 bp | CAGGGCTGGGGAAGCCATGTGTGGCTTCTGGGTGCTAGCTTAGCATaGGCAGGACATGAAACAAACATGGTGAGATGCAAAGTGGCAAGT | + |
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Preference number: 1 (lower is better) Translates to: QGWGSHVWLLGASLA*AGHETNMVRCKVAS Trigger: ACTTGCCACTTTGCATCTCACCATGTTTGTTTCATGTCCTGCGCATGCTAAGCTAGCACCCAGAAGCCACACATGGCTTCCCCAGCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR TCA 90 bp | AGGTGGGGTTCTATAGATGCTGAAGGCAGGGAGCCAGGGAGTCAGTaGTACTCAAGGTTCCTTTCTGGAACATGGTGGTGCCAAGTCAAG | + |
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Preference number: 1 (lower is better) Translates to: RWGSIDAEGREPGSQ*YSRFLSGTWWCQVK Trigger: CTTGACTTGGCACCACCATGTTCCAGAAAGGAACCTTGAGTATCACTGACTCCCTGGCTCCCTGCCTTCAGCATCTATAGAACCCCACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR CCA 90 bp | GGCCGATGTCTTGCTAGTAAGGTGGCAAGATGCAAGACAAGAAAATaGGAGAATGTACTTGTCGCTGGGTCTCATCCAGGCAAAGATGAT | + |
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Preference number: 1 (lower is better) Translates to: GRCLASKVARCKTRK*ENVLVAGSHPGKDD Trigger: ATCATCTTTGCCTGGATGAGACCCAGCGACAAGTACATTCTCCCATTTTCTTGTCTTGCATCTTGCCACCTTACTAGCAAGACATCGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCAGCGGGAGGAGCGGGCTaGAGAAAGGGAGGGAATGAG | + |
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Preference number: 2 (lower is better) Translates to: PLERHSAPPKEGASEGRSAGGAG*RKGGNE Trigger: CTCATTCCCTCCCTTTCTTCAGCCCGCTCCTCCCGC...TGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCAGGGGGGTTCTATAGATGCTaGAGGCAGGGAGCCAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LERHSAPPKEGASEGRSGGFYRC*RQGARE Trigger: CTCCCTGGCTCCCTGCCTTCAGCATCTATAGAACCC...CCCTGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAA 56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCATTGACTCTAAGGCAGTaGGGAGGCGCGGCCTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: PLERHSAPPKEGASEGRSLTLRQ*GGAASG Trigger: ACCAGAGGCCGCGCCTCCCCACTGCCTTAGAGTCAA...TGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCAGGGGGGTCTCTTTGGGACTaGTCCAAGGTGGGGTTCTAT | + |
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Preference number: 2 (lower is better) Translates to: LERHSAPPKEGASEGRSGGSLWD*SKVGFY Trigger: ATAGAACCCCACCTTGGACCAGTCCCAAAGAGACCC...CCCTGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCAGTCTGTGGGGACCTGTaGGGCAAGAAACTTCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: PLERHSAPPKEGASEGRSVCGDL*GKKLLP Trigger: AGGGAGAAGTTTCTTGCCCCACAGGTCCCCACAGAC...TGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCAGCAACGAGGACATCTTaGCTTTCTGGGATAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: PLERHSAPPKEGASEGRSATRTS*LSGIGG Trigger: GCCTCCTATCCCAGAAAGTCAAGATGTCCTCGTTGC...TGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCAGGGAGTGGACCAGGTTCCTaGATAAAAACCATGCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: LERHSAPPKEGASEGRSGSGPGS*IKTMPL Trigger: AAGGGGCATGGTTTTTATCCAGGAACCTGGTCCACT...CCCTGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCAGGTGCTAGCTTAGCATaGGCAGGACATGAAACAAAC | + |
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Preference number: 2 (lower is better) Translates to: PLERHSAPPKEGASEGRSGASLA*AGHETN Trigger: GTTTGTTTCATGTCCTGCGCATGCTAAGCTAGCACC...TGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCAGGGGGTGTGATGAGTCTCTaGTGTTTAGAGAACCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LERHSAPPKEGASEGRSGGVMSL*CLENLL Trigger: CAGAAGGTTCTCTAAACACCAGAGACTCATCACACC...CCCTGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCAAGTGGACCAGGTTCCTaGATAAAAACCATGCCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: PLERHSAPPKEGASEGRSSGPGS*IKTMPL Trigger: AAGGGGCATGGTTTTTATCCAGGAACCTGGTCCACT...TGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCAGGGATGAAACAAACATGGTaGGATGCAAAGTGGCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: LERHSAPPKEGASEGRSGMKQTW*DAKWQV Trigger: CACTTGCCACTTTGCATCTCACCATGTTTGTTTCAT...CCCTGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCAGGGCCTTCTGGCTTAAAATaGCTTCAGGACTACAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: LERHSAPPKEGASEGRSGPSGLK*LQDYKE Trigger: CTCTTTGTAGTCCTGAAGGCATTTTAAGCCAGAAGG...CCCTGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCAGGGTTCCTTTCTGGAACATaGTGGTGCCAAGTCAAGATT | + |
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Preference number: 2 (lower is better) Translates to: LERHSAPPKEGASEGRSGFLSGT*WCQVKI Trigger: AATCTTGACTTGGCACCACCATGTTCCAGAAAGGAA...CCCTGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCATGCAAGACAAGAAAATaGGAGAATGTACTTGTCGCT | + |
|
Preference number: 2 (lower is better) Translates to: PLERHSAPPKEGASEGRSCKTRK*ENVLVA Trigger: AGCGACAAGTACATTCTCCCATTTTCTTGTCTTGCA...TGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCAGGGTCAAGATTATACATTTaGAAAAGAGTGGACCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: LERHSAPPKEGASEGRSGSRLYI*KRVDQV Trigger: AACCTGGTCCACTCTTTTCCAAATGTATAATCTTGA...CCCTGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCAGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGAAGGCAGGTCAGGGCTaGGGAAGCCATGTGTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: LSGLYFTSVIETFFPNQMKAGQG*GSHVWL Trigger: AAGCCACACATGGCTTCCCCAGCCCTGACCTGCCTT...CATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCTGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGCAGTGGTCTGTGGGGACCTGTaGGGCAAGAAACTTCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: RVIFHVGHRNIFPKSNAVVCGDL*GKKLLP Trigger: AGGGAGAAGTTTCTTGCCCCACAGGTCCCCACAGAC...CACTGCATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCAGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGGGGAGGCGCGGCCTCTaGTTTTTCTTTTGGTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: LSGLYFTSVIETFFPNQMGRRGL*FFFWFR Trigger: CCTGAACCAAAAGAAAAACCAGAGGCCGCGCCTCCC...CATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCTGACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGCAGTGGGGAGGCGCGGCCTCTaGTTTTTCTTTTGGTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: RVIFHVGHRNIFPKSNAVGRRGL*FFFWFR Trigger: CCTGAACCAAAAGAAAAACCAGAGGCCGCGCCTCCC...CACTGCATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTCAGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGGCAACGAGGACATCTTaGCTTTCTGGGATAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: LSGLYFTSVIETFFPNQMATRTS*LSGIGG Trigger: GCCTCCTATCCCAGAAAGTCAAGATGTCCTCGTTGC...CATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCTGACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCAGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGGGGTCTCTTTGGGACTaGTCCAAGGTGGGGTTCTAT | + |
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Preference number: 2 (lower is better) Translates to: LSGLYFTSVIETFFPNQMGSLWD*SKVGFY Trigger: ATAGAACCCCACCTTGGACCAGTCCCAAAGAGACCC...CATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCTGACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGCAGTGAAAAAGGGGTCTCTTTaGGACTGGTCCAAGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: RVIFHVGHRNIFPKSNAVKKGSL*DWSKVG Trigger: CCCCACCTTGGACCAGTCCCAAAGAGACCCCTTTTT...CACTGCATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCAGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGAAAAAGGGGTCTCTTTaGGACTGGTCCAAGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LSGLYFTSVIETFFPNQMKKGSL*DWSKVG Trigger: CCCCACCTTGGACCAGTCCCAAAGAGACCCCTTTTT...CATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCTGACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGCAGTGCTCAAGGTTCCTTTCTaGAACATGGTGGTGCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: RVIFHVGHRNIFPKSNAVLKVPF*NMVVPS Trigger: ACTTGGCACCACCATGTTCCAGAAAGGAACCTTGAG...CACTGCATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGCAGCTCAAGGTTCCTTTCTaGAACATGGTGGTGCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: SGLYFTSVIETFFPNQMQLKVPF*NMVVPS Trigger: ACTTGGCACCACCATGTTCCAGAAAGGAACCTTGAG...CTGCATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGCAGTGCAAGACAAGAAAATaGGAGAATGTACTTGTCGCT | + |
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Preference number: 2 (lower is better) Translates to: SGLYFTSVIETFFPNQMQCKTRK*ENVLVA Trigger: AGCGACAAGTACATTCTCCCATTTTCTTGTCTTGCA...CTGCATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR CCA 72 bp | GAGGACTATCCTGTCTGTGTACCTAATCCAGGCTACTaGACTTGGGGGCGCTGCCGCGCCTGCAGCCTATGG | + |
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Preference number: 3 (lower is better) Translates to: EDYPVCVPNPGY*TWGRCRACSLW Trigger: CCATAGGCTGCAGGCGCGGCAGCGCCCCCAAGTCCAGTAGCCTGGATTAGGTACACAGACAGGATAGTCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR CCA 72 bp | CTTCAGAAGGCAGGTCAGGGCTGGGGAAGCCATGTGTaGCTTCTGGGTGCTAGCTTAGCATGCGCAGGACAT | + |
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Preference number: 3 (lower is better) Translates to: LQKAGQGWGSHV*LLGASLACAGH Trigger: ATGTCCTGCGCATGCTAAGCTAGCACCCAGAAGCCACACATGGCTTCCCCAGCCCTGACCTGCCTTCTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR CCA 72 bp | GGAACAAAAAGGGGTCTCTTTGGGACTGGTCCAAGGTaGGGTTCTATAGATGCTGAAGGCAGGGAGCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: GTKRGLFGTGPR*GSIDAEGREPG Trigger: CCCTGGCTCCCTGCCTTCAGCATCTATAGAACCCCACCTTGGACCAGTCCCAAAGAGACCCCTTTTTGTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR GCA 72 bp | GGAAGCCATGTGTGGCTTCTGGGTGCTAGCTTAGCATaGGCAGGACATGAAACAAACATGGTGAGATGCAAA | + |
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Preference number: 3 (lower is better) Translates to: GSHVWLLGASLA*AGHETNMVRCK Trigger: TTTGCATCTCACCATGTTTGTTTCATGTCCTGCGCATGCTAAGCTAGCACCCAGAAGCCACACATGGCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR CCA 72 bp | CTTGCTAGTAAGGTGGCAAGATGCAAGACAAGAAAATaGGAGAATGTACTTGTCGCTGGGTCTCATCCAGGC | + |
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Preference number: 3 (lower is better) Translates to: LASKVARCKTRK*ENVLVAGSHPG Trigger: GCCTGGATGAGACCCAGCGACAAGTACATTCTCCCATTTTCTTGTCTTGCATCTTGCCACCTTACTAGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCAGTCAAGATTATACATTaGGAAAAGAGTGGACCAGGT | + |
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Preference number: 3 (lower is better) Translates to: PLERHSAPPKEGASEGRSVKIIH*EKSGPG Trigger: ACCTGGTCCACTCTTTTCCAAATGTATAATCTTGAC...TGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR CCA 72 bp | AACTTCTCCCTAGTGGCCGATGTCTTGCTAGTAAGGTaGCAAGATGCAAGACAAGAAAATGGGAGAATGTAC | + |
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Preference number: 3 (lower is better) Translates to: NFSLVADVLLVR*QDARQENGRMY Trigger: GTACATTCTCCCATTTTCTTGTCTTGCATCTTGCCACCTTACTAGCAAGACATCGGCCACTAGGGAGAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGCAGGGCAACGAGGACATCTaGACTTTCTGGGATAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: SGLYFTSVIETFFPNQMQGNEDI*TFWDRR Trigger: CCTCCTATCCCAGAAAGTCAAGATGTCCTCGTTGCC...CTGCATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGCAGTGGGCAACGAGGACATCTaGACTTTCTGGGATAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: RVIFHVGHRNIFPKSNAVGNEDI*TFWDRR Trigger: CCTCCTATCCCAGAAAGTCAAGATGTCCTCGTTGCC...CACTGCATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR-3UTR CAA 90 bp | CTGTCAGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGGTCAAGATTATACATTaGGAAAAGAGTGGACCAGGT | + |
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Preference number: 3 (lower is better) Translates to: LSGLYFTSVIETFFPNQMVKIIH*EKSGPG Trigger: ACCTGGTCCACTCTTTTCCAAATGTATAATCTTGAC...CATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCTGACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| CDS-3UTR GCA 90 bp | CCTTTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCAGGGAGGCCACCCACTTaGAGCCCGCACAGGCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PLERHSAPPKEGASEGRSGRPPT*SPHRRQ Trigger: CTGCCGCCTGTGCGGGCTGCAAGTGGGTGGCCTCCC...TGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| CDS-3UTR GCA 90 bp | TTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCAGGGCTGCTCCAACAGGCGTaGCCAGTCGCCCTCGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LERHSAPPKEGASEGRSGLLQQA*PVALGS Trigger: GCTGCCGAGGGCGACTGGGCACGCCTGTTGGAGCAG...CCCTGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR CCA 90 bp | TTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCAGGGACATCACTCAGGTGCTaGCACAGCGCCCGCGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LERHSAPPKEGASEGRSGTSLRC*HSARVH Trigger: GTGGACGCGGGCGCTGTGCCAGCACCTGAGTGATGT...CCCTGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR CCA 90 bp | TTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCAGGGTCCTGCTTCAGAGCCTaGCGCTTGCGCTCCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LERHSAPPKEGASEGRSGSCFRA*RLRSSS Trigger: CGAGCTGGAGCGCAAGCGCCAGGCTCTGAAGCAGGA...CCCTGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR CCA 90 bp | TTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCAGGGCGCTCTACCTGTAGCTaGTGGCGCTCCTGCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: LERHSAPPKEGASEGRSGRSTCS*WRSCST Trigger: CGTGGAGCAGGAGCGCCACCAGCTACAGGTAGAGCG...CCCTGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAACCTTCTGGCTTAAAATGCCTTCAGGACTACAAAGAGGTAGCTGTGAGGAGCTCCAGCTCCCGCTaGCTGCCCCGCATGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: REPSGLKCLQDYKEVAVRSSSSR*LPRMAS Trigger: GCTGGCCATGCGGGGCAGCCAGCGGGAGCTGGAGCT...CCTCACAGCTACCTCTTTGTAGTCCTGAAGGCATTTTAAGCCAGAAGGTTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR CCA 90 bp | TTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCAGGGGTGCCTAGGCTGAGCTaGGTCCAGATGGAAGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LERHSAPPKEGASEGRSGVPRLS*VQMEVA Trigger: GGCTACTTCCATCTGGACCCAGCTCAGCCTAGGCAC...CCCTGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR GCA 90 bp | CCTTTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCACTGCTCCACGGATTGTaGCTCCTGCTTCAGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLERHSAPPKEGASEGRSLLHGL*LLLQSL Trigger: CAGGCTCTGAAGCAGGAGGCACAATCCGTGGAGCAG...TGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAACCTTCTGGCTTAAAATGCCTTCAGGACTACAAAGAGGTAGCTGTGAGGGCCAGCTCACCCATCTaGTCCAACAGGCGTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: REPSGLKCLQDYKEVAVRASSPI*SNRRAQ Trigger: CTGGGCACGCCTGTTGGAGCAGATGGGTGAGCTGGC...CCTCACAGCTACCTCTTTGTAGTCCTGAAGGCATTTTAAGCCAGAAGGTTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAACCTTCTGGCTTAAAATGCCTTCAGGACTACAAAGAGGTAGCTGTGAGGTCAGAGCCTGGCGCTTaGGCTCCAGCTCGAGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: REPSGLKCLQDYKEVAVRSEPGA*APARVP Trigger: CGGAACTCGAGCTGGAGCGCAAGCGCCAGGCTCTGA...CCTCACAGCTACCTCTTTGTAGTCCTGAAGGCATTTTAAGCCAGAAGGTTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCATCCACATCTGGAAGTTaGGGAGGCCACCCACTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLERHSAPPKEGASEGRSSTSGS*GGHPLA Trigger: TGCAAGTGGGTGGCCTCCCCAACTTCCAGATGTGGA...TGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCAGGCTGTCTTCCATGGTaGTCTTCAGGGGCTTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PLERHSAPPKEGASEGRSGCLPW*SSGAFY Trigger: GTAAAAAGCCCCTGAAGATCACCATGGAAGACAGCC...TGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGCAGTGGGGAGGCCACCCACTTaGAGCCCGCACAGGCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVIFHVGHRNIFPKSNAVGRPPT*SPHRRQ Trigger: CTGCCGCCTGTGCGGGCTGCAAGTGGGTGGCCTCCC...CACTGCATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGAGCTCCAGCTCCCGCTaGCTGCCCCGCATGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSGLYFTSVIETFFPNQMSSSSR*LPRMAS Trigger: GCTGGCCATGCGGGGCAGCCAGCGGGAGCTGGAGCT...CATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCTGACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGCAGGCCAGCTCACCCATCTaGTCCAACAGGCGTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGLYFTSVIETFFPNQMQASSPI*SNRRAQ Trigger: CTGGGCACGCCTGTTGGAGCAGATGGGTGAGCTGGC...CTGCATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGCAGTCAGAGCCTGGCGCTTaGGCTCCAGCTCGAGTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SGLYFTSVIETFFPNQMQSEPGA*APARVP Trigger: CGGAACTCGAGCTGGAGCGCAAGCGCCAGGCTCTGA...CTGCATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGTCCTGCTTCAGAGCCTaGCGCTTGCGCTCCAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LSGLYFTSVIETFFPNQMSCFRA*RLRSSS Trigger: CGAGCTGGAGCGCAAGCGCCAGGCTCTGAAGCAGGA...CATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCTGACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGCAGTGCGCTCTACCTGTAGCTaGTGGCGCTCCTGCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: RVIFHVGHRNIFPKSNAVRSTCS*WRSCST Trigger: CGTGGAGCAGGAGCGCCACCAGCTACAGGTAGAGCG...CACTGCATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGCAGTGTCAGGGTCCTCCTTaGGGAGCAGAGGCAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGLYFTSVIETFFPNQMQCQGPP*GAEAGE Trigger: CTCCCCTGCCTCTGCTCCCCAAGGAGGACCCTGACA...CTGCATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGCAGTGTGTCAGGGTCCTCCTTaGGGAGCAGAGGCAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RVIFHVGHRNIFPKSNAVCQGPP*GAEAGE Trigger: CTCCCCTGCCTCTGCTCCCCAAGGAGGACCCTGACA...CACTGCATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGCAGTGTTCAGCTCCGGCAGGTaGACATCACTCAGGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVIFHVGHRNIFPKSNAVFSSGR*TSLRCW Trigger: CCAGCACCTGAGTGATGTGCACCTGCCGGAGCTGAA...CACTGCATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGCAGTTCAGCTCCGGCAGGTaGACATCACTCAGGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGLYFTSVIETFFPNQMQFSSGR*TSLRCW Trigger: CCAGCACCTGAGTGATGTGCACCTGCCGGAGCTGAA...CTGCATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGCAGTGCTGCTCCACGGATTGTaGCTCCTGCTTCAGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVIFHVGHRNIFPKSNAVLLHGL*LLLQSL Trigger: CAGGCTCTGAAGCAGGAGGCACAATCCGTGGAGCAG...CACTGCATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR CCA 90 bp | CTGTCAGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGGTGCCTAGGCTGAGCTaGGTCCAGATGGAAGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSGLYFTSVIETFFPNQMVPRLS*VQMEVA Trigger: GGCTACTTCCATCTGGACCCAGCTCAGCCTAGGCAC...CATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCTGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| CDS-3UTR CCA 90 bp | AGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGCAGTGTCCACATCTGGAAGTTaGGGAGGCCACCCACTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RVIFHVGHRNIFPKSNAVSTSGS*GGHPLA Trigger: TGCAAGTGGGTGGCCTCCCCAACTTCCAGATGTGGA...CACTGCATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| 3UTR CAA 72 bp | TCTGGAACATGGTGGTGCCAAGTCAAGATTATACATTaGGAAAAGAGTGGACCAGGTTCCTGGATAAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: SGTWWCQVKIIH*EKSGPGSWIKT Trigger: GGTTTTTATCCAGGAACCTGGTCCACTCTTTTCCAAATGTATAATCTTGACTTGGCACCACCATGTTCCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| CDS-3UTR TCA 90 bp | CTGTCAGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGGGCTGTCTTCCATGGTaGTCTTCAGGGGCTTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LSGLYFTSVIETFFPNQMGCLPW*SSGAFY Trigger: GTAAAAAGCCCCTGAAGATCACCATGGAAGACAGCC...CATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCTGACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| CDS-3UTR TCA 90 bp | TCAGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGCAGACAGCAGGACCTTGGTaGCCATATCATTGTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGLYFTSVIETFFPNQMQTAGPW*PYHCHC Trigger: ACAGTGACAATGATATGGTCACCAAGGTCCTGCTGT...CTGCATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| CDS-3UTR TCA 90 bp | CTGTCAGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGACAGCAGGACCTTGGTaGCCATATCATTGTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSGLYFTSVIETFFPNQMTAGPW*PYHCHC Trigger: ACAGTGACAATGATATGGTCACCAAGGTCCTGCTGT...CATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCTGACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| CDS CCA 90 bp | GCTCCAACAGGCGTGCCCAGTCGCCCTCGGCAGCCATGGTGGGGCTaGGCGGCGGCGGGCAGGGCATGGTGGTCGGCGAGCTCGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: APTGVPSRPRQPWWG*AAAGRAWWSASSEQ Trigger: CTGCTCCGAGCTCGCCGACCACCATGCCCTGCCCGCCGCCGCCCAGCCCCACCATGGCTGCCGAGGGCGACTGGGCACGCCTGTTGGAGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 ENSMUST00000222456.2 |
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| CDS CCA 90 bp | CGCCCTCGGCAGCCATGGTGGGGCTGGGCGGCGGCGGGCAGGGCATaGTGGTCGGCGAGCTCGGAGCAGCGCTCTTCTTCAGCTCCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RPRQPWWGWAAAGRA*WSASSEQRSSSAPA Trigger: TGCCGGAGCTGAAGAAGAGCGCTGCTCCGAGCTCGCCGACCACCATGCCCTGCCCGCCGCCGCCCAGCCCCACCATGGCTGCCGAGGGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 ENSMUST00000222456.2 |
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| CDS CCA 90 bp | CCTCGGCAGCCATGGTGGGGCTGGGCGGCGGCGGGCAGGGCATGGTaGTCGGCGAGCTCGGAGCAGCGCTCTTCTTCAGCTCCGGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PRQPWWGWAAAGRAW*SASSEQRSSSAPAG Trigger: ACCTGCCGGAGCTGAAGAAGAGCGCTGCTCCGAGCTCGCCGACCACCATGCCCTGCCCGCCGCCGCCCAGCCCCACCATGGCTGCCGAGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 ENSMUST00000222456.2 |
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| CDS GCA 90 bp | AGCTCCAGCTCCCGCTGGCTGCCCCGCATGGCCAGCTCACCCATCTaGTCCAACAGGCGTGCCCAGTCGCCCTCGGCAGCCATGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSSRWLPRMASSPI*SNRRAQSPSAAMVG Trigger: CCCCACCATGGCTGCCGAGGGCGACTGGGCACGCCTGTTGGAGCAGATGGGTGAGCTGGCCATGCGGGGCAGCCAGCGGGAGCTGGAGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 ENSMUST00000222456.2 |
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| CDS GCA 90 bp | TCCTGCTTCAGAGCCTGGCGCTTGCGCTCCAGCTCGAGTTCCGCCTaGATTAGGGCCGCCTCGCGCCGCTCCAGCTCCAGCTCCCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SCFRAWRLRSSSSSA*IRAASRRSSSSSRW Trigger: CCAGCGGGAGCTGGAGCTGGAGCGGCGCGAGGCGGCCCTAATGCAGGCGGAACTCGAGCTGGAGCGCAAGCGCCAGGCTCTGAAGCAGGA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS CCA 90 bp | CATCACTCAGGTGCTGGCACAGCGCCCGCGTCCACATCTGGAAGTTaGGGAGGCCACCCACTTGCAGCCCGCACAGGCGGCAGGTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HHSGAGTAPASTSGS*GGHPLAARTGGRWP Trigger: GGGCCACCTGCCGCCTGTGCGGGCTGCAAGTGGGTGGCCTCCCCAACTTCCAGATGTGGACGCGGGCGCTGTGCCAGCACCTGAGTGATG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 ENSMUST00000222456.2 |
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| CDS TCA 90 bp | AGGCTGAGCTGGGTCCAGATGGAAGTAGCCCCAGGCCTCGGAGTATaGTGGCCCCACGGGCGCGGGACAGAGGCCGCCTTGTTCCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RLSWVQMEVAPGLGV*WPHGRGTEAALFRW Trigger: CCAGCGGAACAAGGCGGCCTCTGTCCCGCGCCCGTGGGGCCATCATACTCCGAGGCCTGGGGCTACTTCCATCTGGACCCAGCTCAGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 ENSMUST00000222456.2 |
||
| CDS CCA 90 bp | GCAGCGCTCTTCTTCAGCTCCGGCAGGTGCACATCACTCAGGTGCTaGCACAGCGCCCGCGTCCACATCTGGAAGTTGGGGAGGCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: AALFFSSGRCTSLRC*HSARVHIWKLGRPP Trigger: GGGTGGCCTCCCCAACTTCCAGATGTGGACGCGGGCGCTGTGCCAGCACCTGAGTGATGTGCACCTGCCGGAGCTGAAGAAGAGCGCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 ENSMUST00000222456.2 |
||
| CDS GCA 90 bp | GGAGCAGCGCTCTTCTTCAGCTCCGGCAGGTGCACATCACTCAGGTaGTGGCACAGCGCCCGCGTCCACATCTGGAAGTTGGGGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GAALFFSSGRCTSLR*WHSARVHIWKLGRP Trigger: TGGCCTCCCCAACTTCCAGATGTGGACGCGGGCGCTGTGCCAGCACCTGAGTGATGTGCACCTGCCGGAGCTGAAGAAGAGCGCTGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 ENSMUST00000222456.2 |
||
| CDS GCA 90 bp | TCTACCTGTAGCTGGTGGCGCTCCTGCTCCACGGATTGTGCCTCCTaGTTCAGAGCCTGGCGCTTGCGCTCCAGCTCGAGTTCCGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: STCSWWRSCSTDCAS*FRAWRLRSSSSSAC Trigger: GCAGGCGGAACTCGAGCTGGAGCGCAAGCGCCAGGCTCTGAAGCAGGAGGCACAATCCGTGGAGCAGGAGCGCCACCAGCTACAGGTAGA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS CCA 90 bp | CCATATCATTGTCACTGTTGTTGTCATGGATGTCAGGGTCCTCCTTaGGGAGCAGAGGCAGGGGAGAGGGCGGTTCCGGGACCTGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PYHCHCCCHGCQGPP*GAEAGERAVPGPVH Trigger: GTGCACAGGTCCCGGAACCGCCCTCTCCCCTGCCTCTGCTCCCCAAGGAGGACCCTGACATCCATGACAACAACAGTGACAATGATATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCATTCAGAGCCTGGCGCTaGCGCTCCAGCTCGAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLERHSAPPKEGASEGRSFRAWR*RSSSSS Trigger: GGAACTCGAGCTGGAGCGCAAGCGCCAGGCTCTGAA...TGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS CCA 90 bp | TGCTTCTTTATCCACTTACTCAGTGCTTCACGCTCTACCTGTAGCTaGTGGCGCTCCTGCTCCACGGATTGTGCCTCCTGCTTCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CFFIHLLSASRSTCS*WRSCSTDCASCFRA Trigger: GGCTCTGAAGCAGGAGGCACAATCCGTGGAGCAGGAGCGCCACCAGCTACAGGTAGAGCGTGAAGCACTGAGTAAGTGGATAAAGAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTAGAAAGGCACAGTGCACCTCCAAAAGAAGGGGCTTCAGAAGGCAGGTCATCATTGTCACTGTTGTaGTCATGGATGTCAGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLERHSAPPKEGASEGRSSLSLL*SWMSGS Trigger: GGACCCTGACATCCATGACAACAACAGTGACAATGA...TGACCTGCCTTCTGAAGCCCCTTCTTTTGGAGGTGCACTGTGCCTTTCTAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAACCTTCTGGCTTAAAATGCCTTCAGGACTACAAAGAGGTAGCTGTGAGGTTGGTGACCATATCATaGTCACTGTTGTTGTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: REPSGLKCLQDYKEVAVRLVTIS*SLLLSW Trigger: CCATGACAACAACAGTGACAATGATATGGTCACCAA...CCTCACAGCTACCTCTTTGTAGTCCTGAAGGCATTTTAAGCCAGAAGGTTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCAGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGTCATTGTCACTGTTGTaGTCATGGATGTCAGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: LSGLYFTSVIETFFPNQMSLSLL*SWMSGS Trigger: GGACCCTGACATCCATGACAACAACAGTGACAATGA...CATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCTGACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| CDS-3UTR CAA 90 bp | AGGGTTATATTTCACGTCGGTCATAGAAACATTTTTCCCAAATCAAATGCAGTGTTGGTGACCATATCATaGTCACTGTTGTTGTCATGG | + |
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Preference number: 5 (lower is better) Translates to: RVIFHVGHRNIFPKSNAVLVTIS*SLLLSW Trigger: CCATGACAACAACAGTGACAATGATATGGTCACCAA...CACTGCATTTGATTTGGGAAAAATGTTTCTATGACCGACGTGAAATATAACCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| CDS CCA 72 bp | GGCGTGCCCAGTCGCCCTCGGCAGCCATGGTGGGGCTaGGCGGCGGCGGGCAGGGCATGGTGGTCGGCGAGC | + |
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Preference number: 6 (lower is better) Translates to: GVPSRPRQPWWG*AAAGRAWWSAS Trigger: GCTCGCCGACCACCATGCCCTGCCCGCCGCCGCCCAGCCCCACCATGGCTGCCGAGGGCGACTGGGCACGCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 ENSMUST00000222456.2 |
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| CDS GCA 72 bp | TCCCGCTGGCTGCCCCGCATGGCCAGCTCACCCATCTaGTCCAACAGGCGTGCCCAGTCGCCCTCGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SRWLPRMASSPI*SNRRAQSPSAA Trigger: GGCTGCCGAGGGCGACTGGGCACGCCTGTTGGAGCAGATGGGTGAGCTGGCCATGCGGGGCAGCCAGCGGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 ENSMUST00000222456.2 |
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| CDS CCA 72 bp | CAGCCATGGTGGGGCTGGGCGGCGGCGGGCAGGGCATaGTGGTCGGCGAGCTCGGAGCAGCGCTCTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: QPWWGWAAAGRA*WSASSEQRSSS Trigger: TGAAGAAGAGCGCTGCTCCGAGCTCGCCGACCACCATGCCCTGCCCGCCGCCGCCCAGCCCCACCATGGCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 ENSMUST00000222456.2 |
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| CDS GCA 72 bp | CGCGTCCACATCTGGAAGTTGGGGAGGCCACCCACTTaGAGCCCGCACAGGCGGCAGGTGGCCCAGGCGCTC | + |
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Preference number: 6 (lower is better) Translates to: RVHIWKLGRPPT*SPHRRQVAQAL Trigger: GAGCGCCTGGGCCACCTGCCGCCTGTGCGGGCTGCAAGTGGGTGGCCTCCCCAACTTCCAGATGTGGACGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 ENSMUST00000222456.2 |
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| CDS CAA 72 bp | CCGCGTCCACATCTGGAAGTTGGGGAGGCCACCCACTaGCAGCCCGCACAGGCGGCAGGTGGCCCAGGCGCT | + |
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Preference number: 6 (lower is better) Translates to: PRPHLEVGEATH*QPAQAAGGPGA Trigger: AGCGCCTGGGCCACCTGCCGCCTGTGCGGGCTGCAAGTGGGTGGCCTCCCCAACTTCCAGATGTGGACGCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 ENSMUST00000222456.2 |
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| CDS CAA 72 bp | AGGTGCTGGCACAGCGCCCGCGTCCACATCTGGAAGTaGGGGAGGCCACCCACTTGCAGCCCGCACAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: RCWHSARVHIWK*GRPPTCSPHRR Trigger: CCGCCTGTGCGGGCTGCAAGTGGGTGGCCTCCCCAACTTCCAGATGTGGACGCGGGCGCTGTGCCAGCACCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 ENSMUST00000222456.2 |
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| CDS CAA 90 bp | CGCTCCTGCTCCACGGATTGTGCCTCCTGCTTCAGAGCCTGGCGCTaGCGCTCCAGCTCGAGTTCCGCCTGCATTAGGGCCGCCTCGCGC | + |
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Preference number: 6 (lower is better) Translates to: RSCSTDCASCFRAWR*RSSSSSACIRAASR Trigger: GCGCGAGGCGGCCCTAATGCAGGCGGAACTCGAGCTGGAGCGCAAGCGCCAGGCTCTGAAGCAGGAGGCACAATCCGTGGAGCAGGAGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| CDS TCA 72 bp | TGGGTCCAGATGGAAGTAGCCCCAGGCCTCGGAGTATaGTGGCCCCACGGGCGCGGGACAGAGGCCGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: WVQMEVAPGLGV*WPHGRGTEAAL Trigger: CAAGGCGGCCTCTGTCCCGCGCCCGTGGGGCCATCATACTCCGAGGCCTGGGGCTACTTCCATCTGGACCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 ENSMUST00000222456.2 |
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| CDS CCA 72 bp | TCACTCAGGTGCTGGCACAGCGCCCGCGTCCACATCTaGAAGTTGGGGAGGCCACCCACTTGCAGCCCGCAC | + |
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Preference number: 6 (lower is better) Translates to: SLRCWHSARVHI*KLGRPPTCSPH Trigger: GTGCGGGCTGCAAGTGGGTGGCCTCCCCAACTTCCAGATGTGGACGCGGGCGCTGTGCCAGCACCTGAGTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 ENSMUST00000222456.2 |
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| CDS GCA 72 bp | CCACGGATTGTGCCTCCTGCTTCAGAGCCTGGCGCTTaGGCTCCAGCTCGAGTTCCGCCTGCATTAGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: PRIVPPASEPGA*APARVPPALGP Trigger: CGGCCCTAATGCAGGCGGAACTCGAGCTGGAGCGCAAGCGCCAGGCTCTGAAGCAGGAGGCACAATCCGTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| CDS GCA 72 bp | AGCTGGTGGCGCTCCTGCTCCACGGATTGTGCCTCCTaGTTCAGAGCCTGGCGCTTGCGCTCCAGCTCGAGT | + |
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Preference number: 6 (lower is better) Translates to: SWWRSCSTDCAS*FRAWRLRSSSS Trigger: ACTCGAGCTGGAGCGCAAGCGCCAGGCTCTGAAGCAGGAGGCACAATCCGTGGAGCAGGAGCGCCACCAGCT 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| CDS CCA 72 bp | GGCCCAGGCGCTCATCATCCGGTGCCTAGGCTGAGCTaGGTCCAGATGGAAGTAGCCCCAGGCCTCGGAGTA | + |
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Preference number: 6 (lower is better) Translates to: GPGAHHPVPRLS*VQMEVAPGLGV Trigger: TACTCCGAGGCCTGGGGCTACTTCCATCTGGACCCAGCTCAGCCTAGGCACCGGATGATGAGCGCCTGGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 ENSMUST00000222456.2 |
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| CDS CAA 72 bp | TCCACGGATTGTGCCTCCTGCTTCAGAGCCTGGCGCTaGCGCTCCAGCTCGAGTTCCGCCTGCATTAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: STDCASCFRAWR*RSSSSSACIRA Trigger: GGCCCTAATGCAGGCGGAACTCGAGCTGGAGCGCAAGCGCCAGGCTCTGAAGCAGGAGGCACAATCCGTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| CDS GCA 72 bp | GAGCAGAGGCAGGGGAGAGGGCGGTTCCGGGACCTGTaGACCGGGGCTCTGCTTCTTTATCCACTTACTCAG | + |
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Preference number: 6 (lower is better) Translates to: EQRQGRGRFRDL*TGALLLYPLTQ Trigger: CTGAGTAAGTGGATAAAGAAGCAGAGCCCCGGTGCACAGGTCCCGGAACCGCCCTCTCCCCTGCCTCTGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| CDS CCA 72 bp | TTCTTCAGCTCCGGCAGGTGCACATCACTCAGGTGCTaGCACAGCGCCCGCGTCCACATCTGGAAGTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: FFSSGRCTSLRC*HSARVHIWKLG Trigger: CCCCAACTTCCAGATGTGGACGCGGGCGCTGTGCCAGCACCTGAGTGATGTGCACCTGCCGGAGCTGAAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 ENSMUST00000222456.2 |
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| CDS CCA 72 bp | TCCTGCTCCACGGATTGTGCCTCCTGCTTCAGAGCCTaGCGCTTGCGCTCCAGCTCGAGTTCCGCCTGCATT | + |
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Preference number: 6 (lower is better) Translates to: SCSTDCASCFRA*RLRSSSSSACI Trigger: AATGCAGGCGGAACTCGAGCTGGAGCGCAAGCGCCAGGCTCTGAAGCAGGAGGCACAATCCGTGGAGCAGGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| CDS CCA 72 bp | TGTCACTGTTGTTGTCATGGATGTCAGGGTCCTCCTTaGGGAGCAGAGGCAGGGGAGAGGGCGGTTCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: CHCCCHGCQGPP*GAEAGERAVPG Trigger: TCCCGGAACCGCCCTCTCCCCTGCCTCTGCTCCCCAAGGAGGACCCTGACATCCATGACAACAACAGTGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| CDS CCA 72 bp | CACTTACTCAGTGCTTCACGCTCTACCTGTAGCTGGTaGCGCTCCTGCTCCACGGATTGTGCCTCCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: HLLSASRSTCSW*RSCSTDCASCF Trigger: GAAGCAGGAGGCACAATCCGTGGAGCAGGAGCGCCACCAGCTACAGGTAGAGCGTGAAGCACTGAGTAAGTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| CDS CCA 72 bp | ATCCACTTACTCAGTGCTTCACGCTCTACCTGTAGCTaGTGGCGCTCCTGCTCCACGGATTGTGCCTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: IHLLSASRSTCS*WRSCSTDCASC Trigger: GCAGGAGGCACAATCCGTGGAGCAGGAGCGCCACCAGCTACAGGTAGAGCGTGAAGCACTGAGTAAGTGGAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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| CDS CAA 72 bp | AGCAGGACCTTGGTGACCATATCATTGTCACTGTTGTaGTCATGGATGTCAGGGTCCTCCTTGGGGAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SRTLVTISLSLL*SWMSGSSLGSR Trigger: TCTGCTCCCCAAGGAGGACCCTGACATCCATGACAACAACAGTGACAATGATATGGTCACCAAGGTCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045909.8 ENSMUST00000221807.2 |
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