Pregenerated sensors for ZBBX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034151Ensembl transcript IDs: ENSMUST00000039269.13, ENSMUST00000107775.8, ENSMUST00000107776.8, ENSMUST00000107778.9, ENSMUST00000124618.2
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCCAGCTCGCCACTGTGTCAAGGCTTCTCGGAAGGACTGGGCAGATaGTTCTTCATCAAAAGGCATTTCCCACATGACCTTGCACCTTGG | + |
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Preference number: 5 (lower is better) Translates to: PSSPLCQGFSEGLGR*FFIKRHFPHDLAPW Trigger: CCAAGGTGCAAGGTCATGTGGGAAATGCCTTTTGATGAAGAAGCATCTGCCCAGTCCTTCCGAGAAGCCTTGACACAGTGGCGAGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039269.13 ENSMUST00000107775.8 ENSMUST00000107776.8 ENSMUST00000107778.9 |
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| CDS TCA 90 bp | GTGGAACTTCAGTGCCCCCTTCTGGTGCATTTTAGCAAAGCAGCCTaGACAATAGTCTTCGCCACATTCCAGGCAGACAAGGAGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: VELQCPLLVHFSKAA*TIVFATFQADKESS Trigger: GCTGCTCTCCTTGTCTGCCTGGAATGTGGCGAAGACTATTGTTCAGGCTGCTTTGCTAAAATGCACCAGAAGGGGGCACTGAAGTTCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000039269.13 ENSMUST00000107775.8 ENSMUST00000107776.8 ENSMUST00000107778.9 ENSMUST00000124618.2 |
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| CDS CCA 90 bp | CAAGTGACAGCAAAGGCTGTATTTCAGGATTTCTTCCAGAAGAGCTaGACTCAGCTCCATGGGGGTCACTTTCACGTGACATCTCAAGGA | + |
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Preference number: 5 (lower is better) Translates to: QVTAKAVFQDFFQKS*TQLHGGHFHVTSQG Trigger: TCCTTGAGATGTCACGTGAAAGTGACCCCCATGGAGCTGAGTCCAGCTCTTCTGGAAGAAATCCTGAAATACAGCCTTTGCTGTCACTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039269.13 ENSMUST00000107778.9 |
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| CDS GCA 90 bp | GCTGATCACACAAGGCATCGGCACTACCAGCATACCCACTTAAGCTaGTCAGTGGGATCCACATTTTGTCTTCTGAAACTGTGGATGTTA | + |
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Preference number: 5 (lower is better) Translates to: ADHTRHRHYQHTHLS*SVGSTFCLLKLWML Trigger: TAACATCCACAGTTTCAGAAGACAAAATGTGGATCCCACTGAGCAGCTTAAGTGGGTATGCTGGTAGTGCCGATGCCTTGTGTGATCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039269.13 ENSMUST00000107776.8 ENSMUST00000107778.9 |
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| CDS TCA 90 bp | CAAGGAGGTCTTTGGACATCTGACTTAAAGTCAGAAAATTGTCATTaGATGCCTGTAACTCTTCTGAGGGTAGGCTGTGAGGGTCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: QGGLWTSDLKSENCH*MPVTLLRVGCEGLL Trigger: CAGAAGACCCTCACAGCCTACCCTCAGAAGAGTTACAGGCATTCAATGACAATTTTCTGACTTTAAGTCAGATGTCCAAAGACCTCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039269.13 ENSMUST00000107778.9 |
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| CDS TCA 90 bp | GTCAAGAAATTCATCCTCTTCCTCATCCGTGCTGTAATCTCCAAGTaGCAGCAAAGGCTGTATTTCAGGATTTCTTCCAGAAGAGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: VKKFILFLIRAVISK*QQRLYFRISSRRAG Trigger: TCCAGCTCTTCTGGAAGAAATCCTGAAATACAGCCTTTGCTGTCACTTGGAGATTACAGCACGGATGAGGAAGAGGATGAATTTCTTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039269.13 ENSMUST00000107778.9 |
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| CDS TCA 90 bp | TGGGGGTCACTTTCACGTGACATCTCAAGGAGGTCTTTGGACATCTaGCTTAAAGTCAGAAAATTGTCATTGAATGCCTGTAACTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: WGSLSRDISRRSLDI*LKVRKLSLNACNSS Trigger: AGAAGAGTTACAGGCATTCAATGACAATTTTCTGACTTTAAGTCAGATGTCCAAAGACCTCCTTGAGATGTCACGTGAAAGTGACCCCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039269.13 ENSMUST00000107778.9 |
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| CDS TCA 90 bp | ATCCTTGACAGGTTACGCAATTTGCTCACATTTCCAGATTTCCAGTaGTATCCACTTGTCGTAAGTTCTTCCTTTCCCTTGTTCCATGTG | + |
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Preference number: 5 (lower is better) Translates to: ILDRLRNLLTFPDFQ*YPLVVSSSFPLFHV Trigger: CACATGGAACAAGGGAAAGGAAGAACTTACGACAAGTGGATATCACTGGAAATCTGGAAATGTGAGCAAATTGCGTAACCTGTCAAGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124618.2 |
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| CDS CCA 90 bp | TATCCACTTGTCGTAAGTTCTTCCTTTCCCTTGTTCCATGTGGACTaGAATTCTCGTAGTTTCTTTTCCATCTTTTGGTTCTCCAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: YPLVVSSSFPLFHVD*NSRSFFSIFWFSSS Trigger: AGAACTGGAGAACCAAAAGATGGAAAAGAAACTACGAGAATTCCAGTCCACATGGAACAAGGGAAAGGAAGAACTTACGACAAGTGGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124618.2 |
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| CDS TCA 90 bp | GTGCAAGACTCCACAGTGTTGCCAAAATCTTTTATGTCATCCTTGTaGTACCTGGAATTTGTTCTCAAACAGAGACTTAAGAGATCTGCT | + |
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Preference number: 5 (lower is better) Translates to: VQDSTVLPKSFMSSL*YLEFVLKQRLKRSA Trigger: AGCAGATCTCTTAAGTCTCTGTTTGAGAACAAATTCCAGGTATCACAAGGATGACATAAAAGATTTTGGCAACACTGTGGAGTCTTGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039269.13 ENSMUST00000107776.8 ENSMUST00000107778.9 |
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| CDS TCA 90 bp | CACATTTTGTCTTCTGAAACTGTGGATGTTATCTCAGAACATGAATaGCTGCCTTTTATGCTTGATGAAGGGAAGACATCGAGTCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: HILSSETVDVISEHE*LPFMLDEGKTSSLS Trigger: TGAAAGACTCGATGTCTTCCCTTCATCAAGCATAAAAGGCAGTCATTCATGTTCTGAGATAACATCCACAGTTTCAGAAGACAAAATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039269.13 ENSMUST00000107776.8 ENSMUST00000107778.9 |
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| CDS CCA 90 bp | GGATTGGAAATAGGAATATTTGCTGTTGATGGTCTCTGTGATTTCTaGCCTGACTTTTGCTGTTGCATATTTGGAAGTGGATTTTCATCA | + |
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Preference number: 5 (lower is better) Translates to: GLEIGIFAVDGLCDF*PDFCCCIFGSGFSS Trigger: TGATGAAAATCCACTTCCAAATATGCAACAGCAAAAGTCAGGCCAGAAATCACAGAGACCATCAACAGCAAATATTCCTATTTCCAATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039269.13 ENSMUST00000107778.9 |
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| CDS GCA 90 bp | ATTCATCAGAATAAGTGCAAGACTCCACAGTGTTGCCAAAATCTGTaGTTTTATGTCATCCTTGTGATACCTGGAATTTGTTCTCAAACA | + |
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Preference number: 5 (lower is better) Translates to: IHQNKCKTPQCCQNL*FYVILVIPGICSQT Trigger: TGTTTGAGAACAAATTCCAGGTATCACAAGGATGACATAAAAGCACAGATTTTGGCAACACTGTGGAGTCTTGCACTTATTCTGATGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107775.8 |
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| CDS CCA 72 bp | CCAGCTCGCCACTGTGTCAAGGCTTCTCGGAAGGACTaGGCAGATGCTTCTTCATCAAAAGGCATTTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: PARHCVKASRKD*ADASSSKGISH Trigger: GTGGGAAATGCCTTTTGATGAAGAAGCATCTGCCCAGTCCTTCCGAGAAGCCTTGACACAGTGGCGAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039269.13 ENSMUST00000107775.8 ENSMUST00000107776.8 ENSMUST00000107778.9 |
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| CDS TCA 72 bp | CAGTGCCCCCTTCTGGTGCATTTTAGCAAAGCAGCCTaGACAATAGTCTTCGCCACATTCCAGGCAGACAAG | + |
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Preference number: 6 (lower is better) Translates to: QCPLLVHFSKAA*TIVFATFQADK Trigger: CTTGTCTGCCTGGAATGTGGCGAAGACTATTGTTCAGGCTGCTTTGCTAAAATGCACCAGAAGGGGGCACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000039269.13 ENSMUST00000107775.8 ENSMUST00000107776.8 ENSMUST00000107778.9 ENSMUST00000124618.2 |
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| CDS TCA 72 bp | AGCAGCTCTGGATGGCATCTGAGCAGCTGCACTTTTTaGTCGGGTGTAAGAGAACAAAAGGCAGCTGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: SSSGWHLSSCTF*SGVREQKAAGV Trigger: GACACCAGCTGCCTTTTGTTCTCTTACACCCGATCAAAAAGTGCAGCTGCTCAGATGCCATCCAGAGCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039269.13 ENSMUST00000107778.9 |
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| CDS CAA 90 bp | GACTGGGCAGATGCTTCTTCATCAAAAGGCATTTCCCACATGACCTaGCACCTTGGGTTTTCTCCTTCTCCTCCTTCTGAGGCTGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: DWADASSSKGISHMT*HLGFSPSPPSEAVA Trigger: AGCTACAGCCTCAGAAGGAGGAGAAGGAGAAAACCCAAGGTGCAAGGTCATGTGGGAAATGCCTTTTGATGAAGAAGCATCTGCCCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039269.13 ENSMUST00000107775.8 ENSMUST00000107776.8 ENSMUST00000107778.9 |
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| CDS GCA 72 bp | CCACTGTGTCAAGGCTTCTCGGAAGGACTGGGCAGATaGTTCTTCATCAAAAGGCATTTCCCACATGACCTT | + |
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Preference number: 6 (lower is better) Translates to: PLCQGFSEGLGR*FFIKRHFPHDL Trigger: AAGGTCATGTGGGAAATGCCTTTTGATGAAGAAGCATCTGCCCAGTCCTTCCGAGAAGCCTTGACACAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039269.13 ENSMUST00000107775.8 ENSMUST00000107776.8 ENSMUST00000107778.9 |
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| CDS CCA 72 bp | GCAAAGGCTGTATTTCAGGATTTCTTCCAGAAGAGCTaGACTCAGCTCCATGGGGGTCACTTTCACGTGACA | + |
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Preference number: 6 (lower is better) Translates to: AKAVFQDFFQKS*TQLHGGHFHVT Trigger: TGTCACGTGAAAGTGACCCCCATGGAGCTGAGTCCAGCTCTTCTGGAAGAAATCCTGAAATACAGCCTTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039269.13 ENSMUST00000107778.9 |
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| CDS GCA 72 bp | ACAAGGCATCGGCACTACCAGCATACCCACTTAAGCTaGTCAGTGGGATCCACATTTTGTCTTCTGAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: TRHRHYQHTHLS*SVGSTFCLLKL Trigger: CAGTTTCAGAAGACAAAATGTGGATCCCACTGAGCAGCTTAAGTGGGTATGCTGGTAGTGCCGATGCCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039269.13 ENSMUST00000107776.8 ENSMUST00000107778.9 |
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| CDS TCA 72 bp | TCATTGAATGCCTGTAACTCTTCTGAGGGTAGGCTGTaGGGGTCTTCTGAAGGATCTGCAGGTTTTCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: SLNACNSSEGRL*GSSEGSAGFLS Trigger: ACTGAGAAAACCTGCAGATCCTTCAGAAGACCCTCACAGCCTACCCTCAGAAGAGTTACAGGCATTCAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039269.13 ENSMUST00000107778.9 |
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| CDS CAA 90 bp | CAGCAGAGAGCTTGGTGGGATTCCCTTTACTTTGTGACGTCATCCTaGACAGGTTACGCAATTTGCTCACATTTCCAGATTTCCAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: QQRAWWDSLYFVTSS*TGYAICSHFQISSD Trigger: ATCACTGGAAATCTGGAAATGTGAGCAAATTGCGTAACCTGTCAAGGATGACGTCACAAAGTAAAGGGAATCCCACCAAGCTCTCTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124618.2 |
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| CDS CAA 72 bp | TGTTGGATAAGATTTGAGATTTTGGCTGTAAGAGAGTaGTTCGGTGGAACTTCAGTGCCCCCTTCTGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: CWIRFEILAVRE*FGGTSVPPSGA Trigger: TGCACCAGAAGGGGGCACTGAAGTTCCACCGAACAACTCTCTTACAGCCAAAATCTCAAATCTTATCCAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000039269.13 ENSMUST00000107775.8 ENSMUST00000107776.8 ENSMUST00000107778.9 ENSMUST00000124618.2 |
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| CDS CAA 72 bp | AAAGTGAGCCACCAACACGACACTTCTGCCTTCCCATaGACTGTACCTGACTTTTGCTGTTGCATATTTGGA | + |
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Preference number: 6 (lower is better) Translates to: KVSHQHDTSAFP*TVPDFCCCIFG Trigger: TCCAAATATGCAACAGCAAAAGTCAGGTACAGTCAATGGGAAGGCAGAAGTGTCGTGTTGGTGGCTCACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107776.8 |
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| CDS TCA 72 bp | TGTTGCATATTTGGAAGTGGATTTTCATCACTTTGCTaGTCACACAAGGCATCGGCACTACCAGCATACCCA | + |
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Preference number: 6 (lower is better) Translates to: CCIFGSGFSSLC*SHKASALPAYP Trigger: TGGGTATGCTGGTAGTGCCGATGCCTTGTGTGATCAGCAAAGTGATGAAAATCCACTTCCAAATATGCAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039269.13 ENSMUST00000107776.8 ENSMUST00000107778.9 |
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| CDS TCA 72 bp | CCAACACGACACTTCTGCCTTCCCATTGACTGTACCTaGCTTTTGCTGTTGCATATTTGGAAGTGGATTTTC | + |
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Preference number: 6 (lower is better) Translates to: PTRHFCLPIDCT*LLLLHIWKWIF Trigger: GAAAATCCACTTCCAAATATGCAACAGCAAAAGTCAGGTACAGTCAATGGGAAGGCAGAAGTGTCGTGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107776.8 |
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| CDS GCA 72 bp | GTCAGACTCATTTTCATTCTGAGTGCACTGTGCCTCTaGAGTAGCTTGATGTGGATGTGTGAATGTATTTGG | + |
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Preference number: 6 (lower is better) Translates to: VRLIFILSALCL*SSLMWMCECIW Trigger: CCAAATACATTCACACATCCACATCAAGCTACTGCAGAGGCACAGTGCACTCAGAATGAAAATGAGTCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039269.13 ENSMUST00000107775.8 ENSMUST00000107776.8 ENSMUST00000107778.9 |
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| CDS CAA 72 bp | GCTTGGTGGGATTCCCTTTACTTTGTGACGTCATCCTaGACAGGTTACGCAATTTGCTCACATTTCCAGATT | + |
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Preference number: 6 (lower is better) Translates to: AWWDSLYFVTSS*TGYAICSHFQI Trigger: AATCTGGAAATGTGAGCAAATTGCGTAACCTGTCAAGGATGACGTCACAAAGTAAAGGGAATCCCACCAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124618.2 |
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| CDS CAA 90 bp | TTGATGGTCTCTGTGATTTCTGGCCTGACTTTTGCTGTTGCATATTaGGAAGTGGATTTTCATCACTTTGCTGATCACACAAGGCATCGG | + |
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Preference number: 6 (lower is better) Translates to: LMVSVISGLTFAVAY*EVDFHHFADHTRHR Trigger: CCGATGCCTTGTGTGATCAGCAAAGTGATGAAAATCCACTTCCAAATATGCAACAGCAAAAGTCAGGCCAGAAATCACAGAGACCATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039269.13 ENSMUST00000107778.9 |
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| CDS TCA 72 bp | GGCACAGCAATTCCTGGGTCTTCAAATTCTGCTCCATaGGTATCATCCAGTTCTACTATTGTTAGAGATGGT | + |
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Preference number: 6 (lower is better) Translates to: GTAIPGSSNSAP*VSSSSTIVRDG Trigger: ACCATCTCTAACAATAGTAGAACTGGATGATACTCATGGAGCAGAATTTGAAGACCCAGGAATTGCTGTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039269.13 ENSMUST00000107775.8 ENSMUST00000107776.8 ENSMUST00000107778.9 |
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| CDS CCA 72 bp | GTAACTTCAATTTCACTTTTCCAGCAGAGAGCTTGGTaGGATTCCCTTTACTTTGTGACGTCATCCTTGACA | + |
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Preference number: 6 (lower is better) Translates to: VTSISLFQQRAW*DSLYFVTSSLT Trigger: TGTCAAGGATGACGTCACAAAGTAAAGGGAATCCCACCAAGCTCTCTGCTGGAAAAGTGAAATTGAAGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124618.2 |
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| CDS CAA 72 bp | GCATACCCACTTAAGCTGCTCAGTGGGATCCACATTTaGTCTTCTGAAACTGTGGATGTTATCTCAGAACAT | + |
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Preference number: 6 (lower is better) Translates to: AYPLKLLSGIHI*SSETVDVISEH Trigger: ATGTTCTGAGATAACATCCACAGTTTCAGAAGACAAAATGTGGATCCCACTGAGCAGCTTAAGTGGGTATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039269.13 ENSMUST00000107776.8 ENSMUST00000107778.9 |
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| CDS CAA 72 bp | TTGCTGTTGCATATTTGGAAGTGGATTTTCATCACTTaGCTGATCACACAAGGCATCGGCACTACCAGCATA | + |
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Preference number: 6 (lower is better) Translates to: LLLHIWKWIFIT*LITQGIGTTSI Trigger: TATGCTGGTAGTGCCGATGCCTTGTGTGATCAGCAAAGTGATGAAAATCCACTTCCAAATATGCAACAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039269.13 ENSMUST00000107776.8 ENSMUST00000107778.9 |
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| CDS TCA 72 bp | CTTTGGACATCTGACTTAAAGTCAGAAAATTGTCATTaGATGCCTGTAACTCTTCTGAGGGTAGGCTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: LWTSDLKSENCH*MPVTLLRVGCE Trigger: CTCACAGCCTACCCTCAGAAGAGTTACAGGCATTCAATGACAATTTTCTGACTTTAAGTCAGATGTCCAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039269.13 ENSMUST00000107778.9 |
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| CDS TCA 72 bp | AGGTTACGCAATTTGCTCACATTTCCAGATTTCCAGTaGTATCCACTTGTCGTAAGTTCTTCCTTTCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: RLRNLLTFPDFQ*YPLVVSSSFPL Trigger: CAAGGGAAAGGAAGAACTTACGACAAGTGGATATCACTGGAAATCTGGAAATGTGAGCAAATTGCGTAACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124618.2 |
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| CDS GCA 72 bp | CTGAAACTGTGGATGTTATCTCAGAACATGAATGACTaGCTTTTATGCTTGATGAAGGGAAGACATCGAGTC | + |
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Preference number: 6 (lower is better) Translates to: LKLWMLSQNMND*LLCLMKGRHRV Trigger: GACTCGATGTCTTCCCTTCATCAAGCATAAAAGGCAGTCATTCATGTTCTGAGATAACATCCACAGTTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039269.13 ENSMUST00000107776.8 ENSMUST00000107778.9 |
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| CDS GCA 72 bp | GCTGTTGATGGTCTCTGTGATTTCTGGCCTGACTTTTaGTGTTGCATATTTGGAAGTGGATTTTCATCACTT | + |
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Preference number: 6 (lower is better) Translates to: AVDGLCDFWPDF*CCIFGSGFSSL Trigger: AAGTGATGAAAATCCACTTCCAAATATGCAACAGCAAAAGTCAGGCCAGAAATCACAGAGACCATCAACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039269.13 ENSMUST00000107778.9 |
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| CDS GCA 72 bp | GACACTTCTGCCTTCCCATTGACTGTACCTGACTTTTaGTGTTGCATATTTGGAAGTGGATTTTCATCACTT | + |
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Preference number: 6 (lower is better) Translates to: DTSAFPLTVPDF*CCIFGSGFSSL Trigger: AAGTGATGAAAATCCACTTCCAAATATGCAACAGCAAAAGTCAGGTACAGTCAATGGGAAGGCAGAAGTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107776.8 |
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| CDS CCA 72 bp | GTCGTAAGTTCTTCCTTTCCCTTGTTCCATGTGGACTaGAATTCTCGTAGTTTCTTTTCCATCTTTTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: VVSSSFPLFHVD*NSRSFFSIFWF Trigger: GAACCAAAAGATGGAAAAGAAACTACGAGAATTCCAGTCCACATGGAACAAGGGAAAGGAAGAACTTACGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124618.2 |
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| CDS CAA 90 bp | GGTAGCATGGTACGAAGTTGTTCCTGTGGAGTTCTTCTGTACTTTTaGAGCCATAATGTTTCCATATATGACAGGCTGTCTTCTGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: GSMVRSCSCGVLLYF*SHNVSIYDRLSSVN Trigger: ATTCACAGAAGACAGCCTGTCATATATGGAAACATTATGGCTCAAAAAGTACAGAAGAACTCCACAGGAACAACTTCGTACCATGCTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039269.13 ENSMUST00000107775.8 ENSMUST00000107776.8 ENSMUST00000107778.9 |
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| CDS CAA 90 bp | ATCTCTTCCTTAAGTAACTTCAATTTCACTTTTCCAGCAGAGAGCTaGGTGGGATTCCCTTTACTTTGTGACGTCATCCTTGACAGGTTA | + |
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Preference number: 6 (lower is better) Translates to: ISSLSNFNFTFPAES*VGFPLLCDVILDRL Trigger: TAACCTGTCAAGGATGACGTCACAAAGTAAAGGGAATCCCACCAAGCTCTCTGCTGGAAAAGTGAAATTGAAGTTACTTAAGGAAGAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124618.2 |
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| CDS CAA 90 bp | CTGGGTCTTCAAATTCTGCTCCATGAGTATCATCCAGTTCTACTATaGTTAGAGATGGTGGAGGTCTCTCTATATTCAATTTTTCCACTG | + |
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Preference number: 6 (lower is better) Translates to: LGLQILLHEYHPVLL*LEMVEVSLYSIFPL Trigger: CAGTGGAAAAATTGAATATAGAGAGACCTCCACCATCTCTAACAATAGTAGAACTGGATGATACTCATGGAGCAGAATTTGAAGACCCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039269.13 ENSMUST00000107775.8 ENSMUST00000107776.8 ENSMUST00000107778.9 |
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| CDS TCA 72 bp | CTTTCACGTGACATCTCAAGGAGGTCTTTGGACATCTaGCTTAAAGTCAGAAAATTGTCATTGAATGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: LSRDISRRSLDI*LKVRKLSLNAC Trigger: ACAGGCATTCAATGACAATTTTCTGACTTTAAGTCAGATGTCCAAAGACCTCCTTGAGATGTCACGTGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039269.13 ENSMUST00000107778.9 |
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| CDS CAA 72 bp | GTACGAAGTTGTTCCTGTGGAGTTCTTCTGTACTTTTaGAGCCATAATGTTTCCATATATGACAGGCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: VRSCSCGVLLYF*SHNVSIYDRLS Trigger: AGACAGCCTGTCATATATGGAAACATTATGGCTCAAAAAGTACAGAAGAACTCCACAGGAACAACTTCGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039269.13 ENSMUST00000107775.8 ENSMUST00000107776.8 ENSMUST00000107778.9 |
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| CDS CAA 72 bp | TCTGTGATTTCTGGCCTGACTTTTGCTGTTGCATATTaGGAAGTGGATTTTCATCACTTTGCTGATCACACA | + |
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Preference number: 6 (lower is better) Translates to: SVISGLTFAVAY*EVDFHHFADHT Trigger: TGTGTGATCAGCAAAGTGATGAAAATCCACTTCCAAATATGCAACAGCAAAAGTCAGGCCAGAAATCACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039269.13 ENSMUST00000107778.9 |
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| CDS CAA 72 bp | CAAATTCTGCTCCATGAGTATCATCCAGTTCTACTATaGTTAGAGATGGTGGAGGTCTCTCTATATTCAATT | + |
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Preference number: 6 (lower is better) Translates to: QILLHEYHPVLL*LEMVEVSLYSI Trigger: AATTGAATATAGAGAGACCTCCACCATCTCTAACAATAGTAGAACTGGATGATACTCATGGAGCAGAATTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039269.13 ENSMUST00000107775.8 ENSMUST00000107776.8 ENSMUST00000107778.9 |
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| CDS CAA 72 bp | TCTGTGCTTTTATGTCATCCTTGTGATACCTGGAATTaGTTCTCAAACAGAGACTTAAGAGATCTGCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: SVLLCHPCDTWN*FSNRDLRDLLF Trigger: GAAAAGCAGATCTCTTAAGTCTCTGTTTGAGAACAAATTCCAGGTATCACAAGGATGACATAAAAGCACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107775.8 |
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| CDS CCA 72 bp | TGTTGCCAAAATCTTTTATGTCATCCTTGTGATACCTaGAATTTGTTCTCAAACAGAGACTTAAGAGATCTG | + |
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Preference number: 6 (lower is better) Translates to: CCQNLLCHPCDT*NLFSNRDLRDL Trigger: CAGATCTCTTAAGTCTCTGTTTGAGAACAAATTCCAGGTATCACAAGGATGACATAAAAGATTTTGGCAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039269.13 ENSMUST00000107776.8 ENSMUST00000107778.9 |
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