RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZAR1L (Mus musculus)

Ensembl gene IDs: ENSMUSG00000056586

Ensembl transcript IDs: ENSMUST00000118769.2

Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TCCGAGAGGGAGCTGCTGTGGAGGGTCTGTGACCCCTGTGAGCACTaGACTGACTTGTCCACTCGAAGGCTCACCTGTACGCCCACCTCC +
Preference number: 5 (lower is better)
Translates to: SERELLWRVCDPCEH*TDLSTRRLTCTPTS
Trigger: GGAGGTGGGCGTACAGGTGAGCCTTCGAGTGGACAAGTCAGTGCAGTGCTCACAGGGGTCACAGACCCTCCACAGCAGCTCCCTCTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2
CDS CCA 90 bp GTAGGTCCTGTGAGCTCCTCCTGGCTTTCCTCGTCTTCCCCATCCTaGGGTCGCCGGATCAAGGCTCTCCGCCCTACTTCCCAAGCTTCG +
Preference number: 5 (lower is better)
Translates to: VGPVSSSWLSSSSPS*GRRIKALRPTSQAS
Trigger: CGAAGCTTGGGAAGTAGGGCGGAGAGCCTTGATCCGGCGACCCCAGGATGGGGAAGACGAGGAAAGCCAGGAGGAGCTCACAGGACCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2
CDS CCA 90 bp TCGGTGGGCTTCCTGGAGCTGGTTCTGTCCGAGAGGGAGCTGCTGTaGAGGGTCTGTGACCCCTGTGAGCACTGCACTGACTTGTCCACT +
Preference number: 5 (lower is better)
Translates to: SVGFLELVLSERELL*RVCDPCEHCTDLST
Trigger: AGTGGACAAGTCAGTGCAGTGCTCACAGGGGTCACAGACCCTCCACAGCAGCTCCCTCTCGGACAGAACCAGCTCCAGGAAGCCCACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2
CDS GCA 90 bp CCACTCGAAGGCTCACCTGTACGCCCACCTCCGTGGTGTGGACACTaGGTAGCCATAGACTCAGGTTGGGGTCCATCTGAGTGGAAACGG +
Preference number: 5 (lower is better)
Translates to: PLEGSPVRPPPWCGH*VAIDSGWGPSEWKR
Trigger: CCGTTTCCACTCAGATGGACCCCAACCTGAGTCTATGGCTACGCAGTGTCCACACCACGGAGGTGGGCGTACAGGTGAGCCTTCGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2
CDS GCA 90 bp AAGCTTCGGTGGGCTTCCTGGAGCTGGTTCTGTCCGAGAGGGAGCTaGTGTGGAGGGTCTGTGACCCCTGTGAGCACTGCACTGACTTGT +
Preference number: 5 (lower is better)
Translates to: KLRWASWSWFCPRGS*CGGSVTPVSTALTC
Trigger: ACAAGTCAGTGCAGTGCTCACAGGGGTCACAGACCCTCCACAGCAGCTCCCTCTCGGACAGAACCAGCTCCAGGAAGCCCACCGAAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2
CDS CCA 90 bp CGCCCACCTCCGTGGTGTGGACACTGCGTAGCCATAGACTCAGGTTaGGGTCCATCTGAGTGGAAACGGCCTGAAGCTGAGCCCTGTTGT +
Preference number: 5 (lower is better)
Translates to: RPPPWCGHCVAIDSG*GPSEWKRPEAEPCC
Trigger: ACAACAGGGCTCAGCTTCAGGCCGTTTCCACTCAGATGGACCCCAACCTGAGTCTATGGCTACGCAGTGTCCACACCACGGAGGTGGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2
CDS CCA 90 bp GCACTGACTTGTCCACTCGAAGGCTCACCTGTACGCCCACCTCCGTaGTGTGGACACTGCGTAGCCATAGACTCAGGTTGGGGTCCATCT +
Preference number: 5 (lower is better)
Translates to: ALTCPLEGSPVRPPP*CGHCVAIDSGWGPS
Trigger: AGATGGACCCCAACCTGAGTCTATGGCTACGCAGTGTCCACACCACGGAGGTGGGCGTACAGGTGAGCCTTCGAGTGGACAAGTCAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2
CDS CCA 90 bp GGAGAATTTCTTGTCTTTGCAGTGGCCACAGAGCTCCTGGCGGTGTaGCCTCCGGACATCAATGTGTCTTTTCTTTGGGGAACAGGAACA +
Preference number: 5 (lower is better)
Translates to: GEFLVFAVATELLAV*PPDINVSFLWGTGT
Trigger: TGTTCCTGTTCCCCAAAGAAAAGACACATTGATGTCCGGAGGCCACACCGCCAGGAGCTCTGTGGCCACTGCAAAGACAAGAAATTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2
CDS CCA 90 bp ACACTACAGGAGAATTTCTTGTCTTTGCAGTGGCCACAGAGCTCCTaGCGGTGTGGCCTCCGGACATCAATGTGTCTTTTCTTTGGGGAA +
Preference number: 5 (lower is better)
Translates to: TLQENFLSLQWPQSS*RCGLRTSMCLFFGE
Trigger: TTCCCCAAAGAAAAGACACATTGATGTCCGGAGGCCACACCGCCAGGAGCTCTGTGGCCACTGCAAAGACAAGAAATTCTCCTGTAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2
CDS CCA 90 bp TTTAAGCTGAAGAAGACACTACAGGAGAATTTCTTGTCTTTGCAGTaGCCACAGAGCTCCTGGCGGTGTGGCCTCCGGACATCAATGTGT +
Preference number: 5 (lower is better)
Translates to: FKLKKTLQENFLSLQ*PQSSWRCGLRTSMC
Trigger: ACACATTGATGTCCGGAGGCCACACCGCCAGGAGCTCTGTGGCCACTGCAAAGACAAGAAATTCTCCTGTAGTGTCTTCTTCAGCTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2
CDS CCA 72 bp GTGAGCTCCTCCTGGCTTTCCTCGTCTTCCCCATCCTaGGGTCGCCGGATCAAGGCTCTCCGCCCTACTTCC +
Preference number: 6 (lower is better)
Translates to: VSSSWLSSSSPS*GRRIKALRPTS
Trigger: GGAAGTAGGGCGGAGAGCCTTGATCCGGCGACCCCAGGATGGGGAAGACGAGGAAAGCCAGGAGGAGCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2
CDS CAA 90 bp GAGCTGCTGTGGAGGGTCTGTGACCCCTGTGAGCACTGCACTGACTaGTCCACTCGAAGGCTCACCTGTACGCCCACCTCCGTGGTGTGG +
Preference number: 6 (lower is better)
Translates to: ELLWRVCDPCEHCTD*STRRLTCTPTSVVW
Trigger: CCACACCACGGAGGTGGGCGTACAGGTGAGCCTTCGAGTGGACAAGTCAGTGCAGTGCTCACAGGGGTCACAGACCCTCCACAGCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2
CDS GCA 72 bp TGGGCTTCCTGGAGCTGGTTCTGTCCGAGAGGGAGCTaGTGTGGAGGGTCTGTGACCCCTGTGAGCACTGCA +
Preference number: 6 (lower is better)
Translates to: WASWSWFCPRGS*CGGSVTPVSTA
Trigger: TGCAGTGCTCACAGGGGTCACAGACCCTCCACAGCAGCTCCCTCTCGGACAGAACCAGCTCCAGGAAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2
CDS CCA 72 bp GGATCAAGGCTCTCCGCCCTACTTCCCAAGCTTCGGTaGGCTTCCTGGAGCTGGTTCTGTCCGAGAGGGAGC +
Preference number: 6 (lower is better)
Translates to: GSRLSALLPKLR*ASWSWFCPRGS
Trigger: GCTCCCTCTCGGACAGAACCAGCTCCAGGAAGCCCACCGAAGCTTGGGAAGTAGGGCGGAGAGCCTTGATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2
CDS GCA 72 bp GGCTCACCTGTACGCCCACCTCCGTGGTGTGGACACTaGGTAGCCATAGACTCAGGTTGGGGTCCATCTGAG +
Preference number: 6 (lower is better)
Translates to: GSPVRPPPWCGH*VAIDSGWGPSE
Trigger: CTCAGATGGACCCCAACCTGAGTCTATGGCTACGCAGTGTCCACACCACGGAGGTGGGCGTACAGGTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2
CDS CCA 72 bp ACTCGAAGGCTCACCTGTACGCCCACCTCCGTGGTGTaGACACTGCGTAGCCATAGACTCAGGTTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: TRRLTCTPTSVV*TLRSHRLRLGS
Trigger: GGACCCCAACCTGAGTCTATGGCTACGCAGTGTCCACACCACGGAGGTGGGCGTACAGGTGAGCCTTCGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2
CDS CCA 72 bp TTCCTGGAGCTGGTTCTGTCCGAGAGGGAGCTGCTGTaGAGGGTCTGTGACCCCTGTGAGCACTGCACTGAC +
Preference number: 6 (lower is better)
Translates to: FLELVLSERELL*RVCDPCEHCTD
Trigger: GTCAGTGCAGTGCTCACAGGGGTCACAGACCCTCCACAGCAGCTCCCTCTCGGACAGAACCAGCTCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2
CDS CAA 72 bp TGGAGGGTCTGTGACCCCTGTGAGCACTGCACTGACTaGTCCACTCGAAGGCTCACCTGTACGCCCACCTCC +
Preference number: 6 (lower is better)
Translates to: WRVCDPCEHCTD*STRRLTCTPTS
Trigger: GGAGGTGGGCGTACAGGTGAGCCTTCGAGTGGACAAGTCAGTGCAGTGCTCACAGGGGTCACAGACCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2
CDS CCA 72 bp TGTCCACTCGAAGGCTCACCTGTACGCCCACCTCCGTaGTGTGGACACTGCGTAGCCATAGACTCAGGTTGG +
Preference number: 6 (lower is better)
Translates to: CPLEGSPVRPPP*CGHCVAIDSGW
Trigger: CCAACCTGAGTCTATGGCTACGCAGTGTCCACACCACGGAGGTGGGCGTACAGGTGAGCCTTCGAGTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2
CDS CCA 72 bp CCGTGGTGTGGACACTGCGTAGCCATAGACTCAGGTTaGGGTCCATCTGAGTGGAAACGGCCTGAAGCTGAG +
Preference number: 6 (lower is better)
Translates to: PWCGHCVAIDSG*GPSEWKRPEAE
Trigger: CTCAGCTTCAGGCCGTTTCCACTCAGATGGACCCCAACCTGAGTCTATGGCTACGCAGTGTCCACACCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2
CDS CCA 72 bp AGTGTCTCCAGGGGCCAGGGTAGGTCAAAGGGTCTGTaGTCCCATAGCCACAGGGAACACAGAAAAGACGCT +
Preference number: 6 (lower is better)
Translates to: SVSRGQGRSKGL*SHSHREHRKDA
Trigger: AGCGTCTTTTCTGTGTTCCCTGTGGCTATGGGACCACAGACCCTTTGACCTACCCTGGCCCCTGGAGACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2
CDS CCA 72 bp CTTGTCTTTGCAGTGGCCACAGAGCTCCTGGCGGTGTaGCCTCCGGACATCAATGTGTCTTTTCTTTGGGGA +
Preference number: 6 (lower is better)
Translates to: LVFAVATELLAV*PPDINVSFLWG
Trigger: TCCCCAAAGAAAAGACACATTGATGTCCGGAGGCCACACCGCCAGGAGCTCTGTGGCCACTGCAAAGACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2
CDS CCA 72 bp AAGAAGACACTACAGGAGAATTTCTTGTCTTTGCAGTaGCCACAGAGCTCCTGGCGGTGTGGCCTCCGGACA +
Preference number: 6 (lower is better)
Translates to: KKTLQENFLSLQ*PQSSWRCGLRT
Trigger: TGTCCGGAGGCCACACCGCCAGGAGCTCTGTGGCCACTGCAAAGACAAGAAATTCTCCTGTAGTGTCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2
CDS CAA 72 bp TATTTTAAGCTGAAGAAGACACTACAGGAGAATTTCTaGTCTTTGCAGTGGCCACAGAGCTCCTGGCGGTGT +
Preference number: 6 (lower is better)
Translates to: YFKLKKTLQENF*SLQWPQSSWRC
Trigger: ACACCGCCAGGAGCTCTGTGGCCACTGCAAAGACAAGAAATTCTCCTGTAGTGTCTTCTTCAGCTTAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118769.2