Pregenerated sensors for ZAR1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056586Ensembl transcript IDs: ENSMUST00000118769.2
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS GCA 90 bp | TCCGAGAGGGAGCTGCTGTGGAGGGTCTGTGACCCCTGTGAGCACTaGACTGACTTGTCCACTCGAAGGCTCACCTGTACGCCCACCTCC | + |
Preference number: 5 (lower is better) Translates to: SERELLWRVCDPCEH*TDLSTRRLTCTPTS Trigger: GGAGGTGGGCGTACAGGTGAGCCTTCGAGTGGACAAGTCAGTGCAGTGCTCACAGGGGTCACAGACCCTCCACAGCAGCTCCCTCTCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |
||
CDS CCA 90 bp | GTAGGTCCTGTGAGCTCCTCCTGGCTTTCCTCGTCTTCCCCATCCTaGGGTCGCCGGATCAAGGCTCTCCGCCCTACTTCCCAAGCTTCG | + |
Preference number: 5 (lower is better) Translates to: VGPVSSSWLSSSSPS*GRRIKALRPTSQAS Trigger: CGAAGCTTGGGAAGTAGGGCGGAGAGCCTTGATCCGGCGACCCCAGGATGGGGAAGACGAGGAAAGCCAGGAGGAGCTCACAGGACCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |
||
CDS CCA 90 bp | TCGGTGGGCTTCCTGGAGCTGGTTCTGTCCGAGAGGGAGCTGCTGTaGAGGGTCTGTGACCCCTGTGAGCACTGCACTGACTTGTCCACT | + |
Preference number: 5 (lower is better) Translates to: SVGFLELVLSERELL*RVCDPCEHCTDLST Trigger: AGTGGACAAGTCAGTGCAGTGCTCACAGGGGTCACAGACCCTCCACAGCAGCTCCCTCTCGGACAGAACCAGCTCCAGGAAGCCCACCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |
||
CDS GCA 90 bp | CCACTCGAAGGCTCACCTGTACGCCCACCTCCGTGGTGTGGACACTaGGTAGCCATAGACTCAGGTTGGGGTCCATCTGAGTGGAAACGG | + |
Preference number: 5 (lower is better) Translates to: PLEGSPVRPPPWCGH*VAIDSGWGPSEWKR Trigger: CCGTTTCCACTCAGATGGACCCCAACCTGAGTCTATGGCTACGCAGTGTCCACACCACGGAGGTGGGCGTACAGGTGAGCCTTCGAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |
||
CDS GCA 90 bp | AAGCTTCGGTGGGCTTCCTGGAGCTGGTTCTGTCCGAGAGGGAGCTaGTGTGGAGGGTCTGTGACCCCTGTGAGCACTGCACTGACTTGT | + |
Preference number: 5 (lower is better) Translates to: KLRWASWSWFCPRGS*CGGSVTPVSTALTC Trigger: ACAAGTCAGTGCAGTGCTCACAGGGGTCACAGACCCTCCACAGCAGCTCCCTCTCGGACAGAACCAGCTCCAGGAAGCCCACCGAAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |
||
CDS CCA 90 bp | CGCCCACCTCCGTGGTGTGGACACTGCGTAGCCATAGACTCAGGTTaGGGTCCATCTGAGTGGAAACGGCCTGAAGCTGAGCCCTGTTGT | + |
Preference number: 5 (lower is better) Translates to: RPPPWCGHCVAIDSG*GPSEWKRPEAEPCC Trigger: ACAACAGGGCTCAGCTTCAGGCCGTTTCCACTCAGATGGACCCCAACCTGAGTCTATGGCTACGCAGTGTCCACACCACGGAGGTGGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |
||
CDS CCA 90 bp | GCACTGACTTGTCCACTCGAAGGCTCACCTGTACGCCCACCTCCGTaGTGTGGACACTGCGTAGCCATAGACTCAGGTTGGGGTCCATCT | + |
Preference number: 5 (lower is better) Translates to: ALTCPLEGSPVRPPP*CGHCVAIDSGWGPS Trigger: AGATGGACCCCAACCTGAGTCTATGGCTACGCAGTGTCCACACCACGGAGGTGGGCGTACAGGTGAGCCTTCGAGTGGACAAGTCAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |
||
CDS CCA 90 bp | GGAGAATTTCTTGTCTTTGCAGTGGCCACAGAGCTCCTGGCGGTGTaGCCTCCGGACATCAATGTGTCTTTTCTTTGGGGAACAGGAACA | + |
Preference number: 5 (lower is better) Translates to: GEFLVFAVATELLAV*PPDINVSFLWGTGT Trigger: TGTTCCTGTTCCCCAAAGAAAAGACACATTGATGTCCGGAGGCCACACCGCCAGGAGCTCTGTGGCCACTGCAAAGACAAGAAATTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |
||
CDS CCA 90 bp | ACACTACAGGAGAATTTCTTGTCTTTGCAGTGGCCACAGAGCTCCTaGCGGTGTGGCCTCCGGACATCAATGTGTCTTTTCTTTGGGGAA | + |
Preference number: 5 (lower is better) Translates to: TLQENFLSLQWPQSS*RCGLRTSMCLFFGE Trigger: TTCCCCAAAGAAAAGACACATTGATGTCCGGAGGCCACACCGCCAGGAGCTCTGTGGCCACTGCAAAGACAAGAAATTCTCCTGTAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |
||
CDS CCA 90 bp | TTTAAGCTGAAGAAGACACTACAGGAGAATTTCTTGTCTTTGCAGTaGCCACAGAGCTCCTGGCGGTGTGGCCTCCGGACATCAATGTGT | + |
Preference number: 5 (lower is better) Translates to: FKLKKTLQENFLSLQ*PQSSWRCGLRTSMC Trigger: ACACATTGATGTCCGGAGGCCACACCGCCAGGAGCTCTGTGGCCACTGCAAAGACAAGAAATTCTCCTGTAGTGTCTTCTTCAGCTTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |
||
CDS CCA 72 bp | GTGAGCTCCTCCTGGCTTTCCTCGTCTTCCCCATCCTaGGGTCGCCGGATCAAGGCTCTCCGCCCTACTTCC | + |
Preference number: 6 (lower is better) Translates to: VSSSWLSSSSPS*GRRIKALRPTS Trigger: GGAAGTAGGGCGGAGAGCCTTGATCCGGCGACCCCAGGATGGGGAAGACGAGGAAAGCCAGGAGGAGCTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |
||
CDS CAA 90 bp | GAGCTGCTGTGGAGGGTCTGTGACCCCTGTGAGCACTGCACTGACTaGTCCACTCGAAGGCTCACCTGTACGCCCACCTCCGTGGTGTGG | + |
Preference number: 6 (lower is better) Translates to: ELLWRVCDPCEHCTD*STRRLTCTPTSVVW Trigger: CCACACCACGGAGGTGGGCGTACAGGTGAGCCTTCGAGTGGACAAGTCAGTGCAGTGCTCACAGGGGTCACAGACCCTCCACAGCAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |
||
CDS GCA 72 bp | TGGGCTTCCTGGAGCTGGTTCTGTCCGAGAGGGAGCTaGTGTGGAGGGTCTGTGACCCCTGTGAGCACTGCA | + |
Preference number: 6 (lower is better) Translates to: WASWSWFCPRGS*CGGSVTPVSTA Trigger: TGCAGTGCTCACAGGGGTCACAGACCCTCCACAGCAGCTCCCTCTCGGACAGAACCAGCTCCAGGAAGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |
||
CDS CCA 72 bp | GGATCAAGGCTCTCCGCCCTACTTCCCAAGCTTCGGTaGGCTTCCTGGAGCTGGTTCTGTCCGAGAGGGAGC | + |
Preference number: 6 (lower is better) Translates to: GSRLSALLPKLR*ASWSWFCPRGS Trigger: GCTCCCTCTCGGACAGAACCAGCTCCAGGAAGCCCACCGAAGCTTGGGAAGTAGGGCGGAGAGCCTTGATCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |
||
CDS GCA 72 bp | GGCTCACCTGTACGCCCACCTCCGTGGTGTGGACACTaGGTAGCCATAGACTCAGGTTGGGGTCCATCTGAG | + |
Preference number: 6 (lower is better) Translates to: GSPVRPPPWCGH*VAIDSGWGPSE Trigger: CTCAGATGGACCCCAACCTGAGTCTATGGCTACGCAGTGTCCACACCACGGAGGTGGGCGTACAGGTGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |
||
CDS CCA 72 bp | ACTCGAAGGCTCACCTGTACGCCCACCTCCGTGGTGTaGACACTGCGTAGCCATAGACTCAGGTTGGGGTCC | + |
Preference number: 6 (lower is better) Translates to: TRRLTCTPTSVV*TLRSHRLRLGS Trigger: GGACCCCAACCTGAGTCTATGGCTACGCAGTGTCCACACCACGGAGGTGGGCGTACAGGTGAGCCTTCGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |
||
CDS CCA 72 bp | TTCCTGGAGCTGGTTCTGTCCGAGAGGGAGCTGCTGTaGAGGGTCTGTGACCCCTGTGAGCACTGCACTGAC | + |
Preference number: 6 (lower is better) Translates to: FLELVLSERELL*RVCDPCEHCTD Trigger: GTCAGTGCAGTGCTCACAGGGGTCACAGACCCTCCACAGCAGCTCCCTCTCGGACAGAACCAGCTCCAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |
||
CDS CAA 72 bp | TGGAGGGTCTGTGACCCCTGTGAGCACTGCACTGACTaGTCCACTCGAAGGCTCACCTGTACGCCCACCTCC | + |
Preference number: 6 (lower is better) Translates to: WRVCDPCEHCTD*STRRLTCTPTS Trigger: GGAGGTGGGCGTACAGGTGAGCCTTCGAGTGGACAAGTCAGTGCAGTGCTCACAGGGGTCACAGACCCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |
||
CDS CCA 72 bp | TGTCCACTCGAAGGCTCACCTGTACGCCCACCTCCGTaGTGTGGACACTGCGTAGCCATAGACTCAGGTTGG | + |
Preference number: 6 (lower is better) Translates to: CPLEGSPVRPPP*CGHCVAIDSGW Trigger: CCAACCTGAGTCTATGGCTACGCAGTGTCCACACCACGGAGGTGGGCGTACAGGTGAGCCTTCGAGTGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |
||
CDS CCA 72 bp | CCGTGGTGTGGACACTGCGTAGCCATAGACTCAGGTTaGGGTCCATCTGAGTGGAAACGGCCTGAAGCTGAG | + |
Preference number: 6 (lower is better) Translates to: PWCGHCVAIDSG*GPSEWKRPEAE Trigger: CTCAGCTTCAGGCCGTTTCCACTCAGATGGACCCCAACCTGAGTCTATGGCTACGCAGTGTCCACACCACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |
||
CDS CCA 72 bp | AGTGTCTCCAGGGGCCAGGGTAGGTCAAAGGGTCTGTaGTCCCATAGCCACAGGGAACACAGAAAAGACGCT | + |
Preference number: 6 (lower is better) Translates to: SVSRGQGRSKGL*SHSHREHRKDA Trigger: AGCGTCTTTTCTGTGTTCCCTGTGGCTATGGGACCACAGACCCTTTGACCTACCCTGGCCCCTGGAGACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |
||
CDS CCA 72 bp | CTTGTCTTTGCAGTGGCCACAGAGCTCCTGGCGGTGTaGCCTCCGGACATCAATGTGTCTTTTCTTTGGGGA | + |
Preference number: 6 (lower is better) Translates to: LVFAVATELLAV*PPDINVSFLWG Trigger: TCCCCAAAGAAAAGACACATTGATGTCCGGAGGCCACACCGCCAGGAGCTCTGTGGCCACTGCAAAGACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |
||
CDS CCA 72 bp | AAGAAGACACTACAGGAGAATTTCTTGTCTTTGCAGTaGCCACAGAGCTCCTGGCGGTGTGGCCTCCGGACA | + |
Preference number: 6 (lower is better) Translates to: KKTLQENFLSLQ*PQSSWRCGLRT Trigger: TGTCCGGAGGCCACACCGCCAGGAGCTCTGTGGCCACTGCAAAGACAAGAAATTCTCCTGTAGTGTCTTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |
||
CDS CAA 72 bp | TATTTTAAGCTGAAGAAGACACTACAGGAGAATTTCTaGTCTTTGCAGTGGCCACAGAGCTCCTGGCGGTGT | + |
Preference number: 6 (lower is better) Translates to: YFKLKKTLQENF*SLQWPQSSWRC Trigger: ACACCGCCAGGAGCTCTGTGGCCACTGCAAAGACAAGAAATTCTCCTGTAGTGTCTTCTTCAGCTTAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118769.2 |