Pregenerated sensors for ZAR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063935Ensembl transcript IDs: ENSMUST00000073528.4, ENSMUST00000202174.2
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GAAAGGGAAGAGGTGAAGAGGGGAGAAAGCTCACTTGTCCATTCCATTAGCCCCCGGCACCCTGCAGGCTaGAGCGTGCGGCGCCCGAGT | + |
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Preference number: 4 (lower is better) Translates to: EREEVKRGESSLVHSISPRHPAG*SVRRPS Trigger: ACTCGGGCGCCGCACGCTGCAGCCTGCAGGGTGCCG...GGGGCTAATGGAATGGACAAGTGAGCTTTCTCCCCTCTTCACCTCTTCCCTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073528.4 |
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| CDS-3UTR GCA 90 bp | GAAAGGGAAGAGGTGAAGAGGGGAGAAAGCTCACTTGTCCATTCCATTAGCCCCAGGCGCTCCTTGTCCTaGTCCGTGCTTTGCGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: EREEVKRGESSLVHSISPRRSLS*SVLCGE Trigger: CTCCCCGCAAAGCACGGAGCAGGACAAGGAGCGCCT...GGGGCTAATGGAATGGACAAGTGAGCTTTCTCCCCTCTTCACCTCTTCCCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR GCA 90 bp | TCACAGGCTTTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGCTGGCTCGGCACCCTaGAGGCTGCAGCGTGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: SQALYPSTLSVMKNLEREAGSAP*RLQRAA Trigger: CGCCGCACGCTGCAGCCTGCAGGGTGCCGAGCCAGC...TTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAAAGCCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073528.4 |
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| CDS-3UTR GCA 90 bp | ATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGAGGTGAAGAGTCCGGTGGTGGCTGCTaGTCCCACCCGGCCTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: ISKYTVCHEEFGKGRGEESGGGC*SHPACP Trigger: AGGGCAGGCCGGGTGGGAGCAGCAGCCACCACCGGA...CTCTTCACCTCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR GCA 90 bp | AGAGGGGAGAAAGCTCACTTGTCCATTCCATTAGCCCCATCTAGCAGAAACGTTCTCCCAGGCTCAGACTaGATCGCCGCCACACTGTTC | + |
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Preference number: 4 (lower is better) Translates to: RGEKAHLSIPLAPSSRNVLPGSD*IAATLF Trigger: GAACAGTGTGGCGGCGATGCAGTCTGAGCCTGGGAG...AACGTTTCTGCTAGATGGGGCTAATGGAATGGACAAGTGAGCTTTCTCCCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR CCA 90 bp | ACAGGCTTTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGACCGGTCCTCCGGTGGTaGCTGCTGCTCCCACCCGGC | + |
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Preference number: 4 (lower is better) Translates to: TGFISKYTVCHEEFGKGRPVLRW*LLLPPG Trigger: GCCGGGTGGGAGCAGCAGCCACCACCGGAGGACCGG...TCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAAAGCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR GCA 90 bp | AGAGGGGAGAAAGCTCACTTGTCCATTCCATTAGCCCCATCTAGCAGAAACGTTCTCCCACACAAGTCTTaGCGATGGGGGCGTTTAGGG | + |
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Preference number: 4 (lower is better) Translates to: RGEKAHLSIPLAPSSRNVLPHKS*RWGRLG Trigger: CCCTAAACGCCCCCATCGGCAAGACTTGTGTGGGAG...AACGTTTCTGCTAGATGGGGCTAATGGAATGGACAAGTGAGCTTTCTCCCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR CCA 90 bp | ATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGAGGTGAAGAGGTTCCGGTCCTCCGGTaGTGGCTGCTGCTCCCACCC | + |
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Preference number: 4 (lower is better) Translates to: ISKYTVCHEEFGKGRGEEVPVLR*WLLLPP Trigger: GGGTGGGAGCAGCAGCCACCACCGGAGGACCGGAAC...CTCTTCACCTCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR TCA 90 bp | TTTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGAGGTGAAGCGACAGCAGGGCCATaGGCTGTGCCCGCTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: FISKYTVCHEEFGKGRGEATAGP*AVPAGG Trigger: GCCACCAGCGGGCACAGCTCATGGCCCTGCTGTCGC...TTCACCTCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073528.4 |
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| CDS-3UTR GCA 90 bp | ATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGAGGTGAAGAGCAGGGCCATGAGCTGTaGCCGCTGGTGGCTGTCGAC | + |
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Preference number: 4 (lower is better) Translates to: ISKYTVCHEEFGKGRGEEQGHEL*PLVAVD Trigger: GTCGACAGCCACCAGCGGGCACAGCTCATGGCCCTG...CTCTTCACCTCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073528.4 |
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| CDS-3UTR GCA 90 bp | ACAGGCTTTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGACCACCCGGCCTGCCCTaGAGCCTGAACATCGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: TGFISKYTVCHEEFGKGRPPGLP*SLNIAL Trigger: GAGGGCGATGTTCAGGCTGCAGGGCAGGCCGGGTGG...TCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAAAGCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR GCA 90 bp | TCACAGGCTTTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAACCACCCGGCCTGCCCTaGAGCCTGAACATCGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: SQALYPSTLSVMKNLEREPPGLP*SLNIAL Trigger: GAGGGCGATGTTCAGGCTGCAGGGCAGGCCGGGTGG...TTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAAAGCCTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR GCA 90 bp | TTTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGAGGTGAATCCGGTGGTGGCTGCTaGTCCCACCCGGCCTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: FISKYTVCHEEFGKGRGESGGGC*SHPACP Trigger: AGGGCAGGCCGGGTGGGAGCAGCAGCCACCACCGGA...TTCACCTCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR CCA 90 bp | ACAGGCTTTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGAGTTCCGGTCCTCCGGTaGTGGCTGCTGCTCCCACCC | + |
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Preference number: 4 (lower is better) Translates to: TGFISKYTVCHEEFGKGRVPVLR*WLLLPP Trigger: GGGTGGGAGCAGCAGCCACCACCGGAGGACCGGAAC...TCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAAAGCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR GCA 90 bp | ATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGAGGTGAAGAGTCCTGCTCCGTGCTTTaGGGGGAGGCCTGGTCTCGA | + |
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Preference number: 4 (lower is better) Translates to: ISKYTVCHEEFGKGRGEESCSVL*GEAWSR Trigger: TCGAGACCAGGCCTCCCCGCAAAGCACGGAGCAGGA...CTCTTCACCTCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR GCA 90 bp | GAAAGGGAAGAGGTGAAGAGGGGAGAAAGCTCACTTGTCCATTCCATTAGCCCCACAGGCGTTTGTCCTTaGATCTCCCACACAAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: EREEVKRGESSLVHSISPTGVCP*ISHTSL Trigger: AAGACTTGTGTGGGAGATGCAAGGACAAACGCCTGT...GGGGCTAATGGAATGGACAAGTGAGCTTTCTCCCCTCTTCACCTCTTCCCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR CCA 90 bp | TTTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGAGGTGAACGGGTCGGCAGCCCCTaGCTCCGAACCTCCAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: FISKYTVCHEEFGKGRGERVGSP*LRTSSH Trigger: ATGGCTGGAGGTTCGGAGCCAGGGGCTGCCGACCCG...TTCACCTCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073528.4 |
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| CDS-3UTR CCA 90 bp | ACAGGCTTTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGAAGCTGTGCCCGCTGGTaGCTGTCGACGTACTCCGCG | + |
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Preference number: 4 (lower is better) Translates to: TGFISKYTVCHEEFGKGRSCARW*LSTYSA Trigger: CGCGGAGTACGTCGACAGCCACCAGCGGGCACAGCT...TCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAAAGCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073528.4 |
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| CDS-3UTR CCA 90 bp | TCACAGGCTTTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAATCCCCTCTCCCTTCGTaGGTGTCTGCCTGCCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: SQALYPSTLSVMKNLERESPLPS*VSACLP Trigger: CGGGAGGCAGGCAGACACCCACGAAGGGAGAGGGGA...TTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAAAGCCTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR CCA 90 bp | TTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGAGGTGAAGTCCCCTCTCCCTTCGTaGGTGTCTGCCTGCCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: LYPSTLSVMKNLEREEVKSPLPS*VSACLP Trigger: CGGGAGGCAGGCAGACACCCACGAAGGGAGAGGGGA...CTTCACCTCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR TCA 90 bp | TTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGAGGTGAAGGAATCACCGGGGTCCTaGGCCATCTCTGCGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: LYPSTLSVMKNLEREEVKESPGS*AISAAG Trigger: TCCTGCCGCAGAGATGGCTCAGGACCCCGGTGATTC...CTTCACCTCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR GCA 90 bp | TTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGAGGTGAAGTCCTGCTCCGTGCTTTaGGGGGAGGCCTGGTCTCGA | + |
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Preference number: 4 (lower is better) Translates to: LYPSTLSVMKNLEREEVKSCSVL*GEAWSR Trigger: TCGAGACCAGGCCTCCCCGCAAAGCACGGAGCAGGA...CTTCACCTCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR GCA 90 bp | TCACAGGCTTTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAAGGCGCTCCTTGTCCTaGTCCGTGCTTTGCGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: SQALYPSTLSVMKNLERERRSLS*SVLCGE Trigger: CTCCCCGCAAAGCACGGAGCAGGACAAGGAGCGCCT...TTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAAAGCCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR TCA 90 bp | TCACAGGCTTTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAATCCCGCAACCTCCAGTaGGGAGGAGAGGCCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: SQALYPSTLSVMKNLERESRNLQ*GGEATE Trigger: TTCTGTGGCCTCTCCTCCTCACTGGAGGTTGCGGGA...TTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAAAGCCTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR TCA 90 bp | ACAGGCTTTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGATCCCGCAACCTCCAGTaGGGAGGAGAGGCCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: TGFISKYTVCHEEFGKGRSRNLQ*GGEATE Trigger: TTCTGTGGCCTCTCCTCCTCACTGGAGGTTGCGGGA...TCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAAAGCCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR TCA 90 bp | TTTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGAGGTGAAGAATCACCGGGGTCCTaGGCCATCTCTGCGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: FISKYTVCHEEFGKGRGEESPGS*AISAAG Trigger: TCCTGCCGCAGAGATGGCTCAGGACCCCGGTGATTC...TTCACCTCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR GCA 90 bp | ACAGGCTTTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGACTCCCACACAAGTCTTaGCGATGGGGGCGTTTAGGG | + |
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Preference number: 4 (lower is better) Translates to: TGFISKYTVCHEEFGKGRLPHKS*RWGRLG Trigger: CCCTAAACGCCCCCATCGGCAAGACTTGTGTGGGAG...TCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAAAGCCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR CCA 90 bp | ACAGGCTTTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGACGTTTAGGGTCCACGTaGCGAAGTCTGACTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: TGFISKYTVCHEEFGKGRRLGST*RSLTGQ Trigger: CTGCCCAGTCAGACTTCGCCACGTGGACCCTAAACG...TCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAAAGCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR CCA 90 bp | TTTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGAGGTGAACGTTTAGGGTCCACGTaGCGAAGTCTGACTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: FISKYTVCHEEFGKGRGERLGST*RSLTGQ Trigger: CTGCCCAGTCAGACTTCGCCACGTGGACCCTAAACG...TTCACCTCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR CCA 90 bp | ATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGAGGTGAAGAGTTCTGCTCTAAGAACTaGAAACGCAGGCGCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: ISKYTVCHEEFGKGRGEEFCSKN*KRRRSL Trigger: CAAGGAGCGCCTGCGTTTCCAGTTCTTAGAGCAGAA...CTCTTCACCTCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073528.4 |
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| CDS-3UTR GCA 90 bp | ATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGAGGTGAAGAGACAGGCGTTTGTCCTTaGATCTCCCACACAAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: ISKYTVCHEEFGKGRGEETGVCP*ISHTSL Trigger: AAGACTTGTGTGGGAGATGCAAGGACAAACGCCTGT...CTCTTCACCTCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR GCA 90 bp | TTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGAGGTGAAGTCTCCCACCGGATTTTaGAGTCCTTGCAGTGATAGT | + |
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Preference number: 4 (lower is better) Translates to: LYPSTLSVMKNLEREEVKSPTGF*SPCSDS Trigger: ACTATCACTGCAAGGACTGCAAAATCCGGTGGGAGA...CTTCACCTCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073528.4 |
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| CDS GCA 90 bp | CCGATCGGGCGTCGGGGCTGGCTCGGCACCCTGCAGGCTGCAGCGTaGGGCGCCCGAGTGAACACTGCACCGAGGCGTCGCGGCGCGGGT | + |
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Preference number: 5 (lower is better) Translates to: PIGRRGWLGTLQAAA*GARVNTAPRRRGAG Trigger: ACCCGCGCCGCGACGCCTCGGTGCAGTGTTCACTCGGGCGCCGCACGCTGCAGCCTGCAGGGTGCCGAGCCAGCCCCGACGCCCGATCGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073528.4 |
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| CDS GCA 90 bp | CAGGAACCCGATCGGGCGTCGGGGCTGGCTCGGCACCCTGCAGGCTaGAGCGTGCGGCGCCCGAGTGAACACTGCACCGAGGCGTCGCGG | + |
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Preference number: 5 (lower is better) Translates to: QEPDRASGLARHPAG*SVRRPSEHCTEASR Trigger: CCGCGACGCCTCGGTGCAGTGTTCACTCGGGCGCCGCACGCTGCAGCCTGCAGGGTGCCGAGCCAGCCCCGACGCCCGATCGGGTTCCTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073528.4 |
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| CDS GCA 90 bp | CCTCGCGGCCACCTCTCTCGGCTCCGGTTCCCGGGTCCCCGAGGATaGCGGGCTCCCCTCTCCCTTCGTGGGTGTCTGCCTGCCTCCCGC | + |
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Preference number: 5 (lower is better) Translates to: PRGHLSRLRFPGPRG*RAPLSLRGCLPASR Trigger: GCGGGAGGCAGGCAGACACCCACGAAGGGAGAGGGGAGCCCGGCATCCTCGGGGACCCGGGAACCGGAGCCGAGAGAGGTGGCCGCGAGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS GCA 90 bp | GCTCGGCACCCTGCAGGCTGCAGCGTGCGGCGCCCGAGTGAACACTaGACCGAGGCGTCGCGGCGCGGGTTCACCTGCACCGCAGCGTCA | + |
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Preference number: 5 (lower is better) Translates to: ARHPAGCSVRRPSEH*TEASRRGFTCTAAS Trigger: TGACGCTGCGGTGCAGGTGAACCCGCGCCGCGACGCCTCGGTGCAGTGTTCACTCGGGCGCCGCACGCTGCAGCCTGCAGGGTGCCGAGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073528.4 |
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| CDS CCA 90 bp | CCGGTTCCCGGGTCCCCGAGGATGCCGGGCTCCCCTCTCCCTTCGTaGGTGTCTGCCTGCCTCCCGCAACCTCCAGTGAGGAGGAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: PVPGSPRMPGSPLPS*VSACLPQPPVRRRG Trigger: GCCTCTCCTCCTCACTGGAGGTTGCGGGAGGCAGGCAGACACCCACGAAGGGAGAGGGGAGCCCGGCATCCTCGGGGACCCGGGAACCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS GCA 90 bp | CGGGTCCCCGAGGATGCCGGGCTCCCCTCTCCCTTCGTGGGTGTCTaGCTGCCTCCCGCAACCTCCAGTGAGGAGGAGAGGCCACAGAAG | + |
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Preference number: 5 (lower is better) Translates to: RVPEDAGLPSPFVGV*LPPATSSEEERPQK Trigger: CTTCTGTGGCCTCTCCTCCTCACTGGAGGTTGCGGGAGGCAGGCAGACACCCACGAAGGGAGAGGGGAGCCCGGCATCCTCGGGGACCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS GCA 90 bp | TCCCCGAGGATGCCGGGCTCCCCTCTCCCTTCGTGGGTGTCTGCCTaGCTCCCGCAACCTCCAGTGAGGAGGAGAGGCCACAGAAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: SPRMPGSPLPSWVSA*LPQPPVRRRGHRRS Trigger: TGACCTTCTGTGGCCTCTCCTCCTCACTGGAGGTTGCGGGAGGCAGGCAGACACCCACGAAGGGAGAGGGGAGCCCGGCATCCTCGGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS TCA 90 bp | CCCCTCTCCCTTCGTGGGTGTCTGCCTGCCTCCCGCAACCTCCAGTaGGGAGGAGAGGCCACAGAAGGTCACGGACGAGAACGGGGCTAC | + |
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Preference number: 5 (lower is better) Translates to: PLSLRGCLPASRNLQ*GGEATEGHGRERGY Trigger: GTAGCCCCGTTCTCGTCCGTGACCTTCTGTGGCCTCTCCTCCTCACTGGAGGTTGCGGGAGGCAGGCAGACACCCACGAAGGGAGAGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS GCA 90 bp | CTGGTCTCGAGGGGCATCCGAATCACCGGGGTCCTGAGCCATCTCTaGGGCAGGACATGGCTCCTCGCTCCCAGGCTCAGACTGCATCGC | + |
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Preference number: 5 (lower is better) Translates to: LVSRGIRITGVLSHL*GRTWLLAPRLRLHR Trigger: GCGATGCAGTCTGAGCCTGGGAGCGAGGAGCCATGTCCTGCCGCAGAGATGGCTCAGGACCCCGGTGATTCGGATGCCCCTCGAGACCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS CCA 90 bp | GGCATCCGAATCACCGGGGTCCTGAGCCATCTCTGCGGCAGGACATaGCTCCTCGCTCCCAGGCTCAGACTGCATCGCCGCCACACTGTT | + |
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Preference number: 5 (lower is better) Translates to: GIRITGVLSHLCGRT*LLAPRLRLHRRHTV Trigger: AACAGTGTGGCGGCGATGCAGTCTGAGCCTGGGAGCGAGGAGCCATGTCCTGCCGCAGAGATGGCTCAGGACCCCGGTGATTCGGATGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR CAA 90 bp | TCACAGGCTTTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAAAACGCAGGCGCTCCTaGTCCTGCTCCGTGCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: SQALYPSTLSVMKNLEREKRRRS*SCSVLC Trigger: GCAAAGCACGGAGCAGGACAAGGAGCGCCTGCGTTT...TTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAAAGCCTGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR CAA 90 bp | TTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGAGGTGAAGAAACGCAGGCGCTCCTaGTCCTGCTCCGTGCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: LYPSTLSVMKNLEREEVKKRRRS*SCSVLC Trigger: GCAAAGCACGGAGCAGGACAAGGAGCGCCTGCGTTT...CTTCACCTCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR CAA 90 bp | AGAGGGGAGAAAGCTCACTTGTCCATTCCATTAGCCCCATCTAGCAGAAACGTTAGTTCTTTTACAACTTaGACAGGTGATGTCCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: RGEKAHLSIPLAPSSRNVSSFTT*TGDVLH Trigger: GTGGAGGACATCACCTGTCAAAGTTGTAAAAGAACT...AACGTTTCTGCTAGATGGGGCTAATGGAATGGACAAGTGAGCTTTCTCCCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073528.4 |
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| CDS-3UTR CAA 90 bp | TTTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGAGGTGAATCTCCCACACAAGTCTaGCCGATGGGGGCGTTTAGG | + |
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Preference number: 5 (lower is better) Translates to: FISKYTVCHEEFGKGRGESPTQV*PMGAFR Trigger: CCTAAACGCCCCCATCGGCAAGACTTGTGTGGGAGA...TTCACCTCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS-3UTR CAA 90 bp | TTTATATCCAAGTACACTGTCTGTCATGAAGAATTTGGAAAGGGAAGAGGTGAAACTCGGCAGAACTGTTaGAAGTACACCTTACTGGTG | + |
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Preference number: 5 (lower is better) Translates to: FISKYTVCHEEFGKGRGETRQNC*KYTLLV Trigger: CACCAGTAAGGTGTACTTCAAACAGTTCTGCCGAGT...TTCACCTCTTCCCTTTCCAAATTCTTCATGACAGACAGTGTACTTGGATATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073528.4 |
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| CDS GCA 72 bp | CGTCGGGGCTGGCTCGGCACCCTGCAGGCTGCAGCGTaGGGCGCCCGAGTGAACACTGCACCGAGGCGTCGC | + |
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Preference number: 6 (lower is better) Translates to: RRGWLGTLQAAA*GARVNTAPRRR Trigger: GCGACGCCTCGGTGCAGTGTTCACTCGGGCGCCGCACGCTGCAGCCTGCAGGGTGCCGAGCCAGCCCCGACG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073528.4 |
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| CDS CCA 72 bp | CACGGGGTTGACAGGAACCCGATCGGGCGTCGGGGCTaGCTCGGCACCCTGCAGGCTGCAGCGTGCGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: HGVDRNPIGRRG*LGTLQAAACGA Trigger: GGCGCCGCACGCTGCAGCCTGCAGGGTGCCGAGCCAGCCCCGACGCCCGATCGGGTTCCTGTCAACCCCGTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073528.4 |
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| CDS TCA 72 bp | GGCGCGGGTTCACCTGCACCGCAGCGTCACGGCTGCTaGCCGACCGGGGACCCATCCGCGACAGCAGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: GAGSPAPQRHGC*PTGDPSATAGP Trigger: TGGCCCTGCTGTCGCGGATGGGTCCCCGGTCGGTCAGCAGCCGTGACGCTGCGGTGCAGGTGAACCCGCGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073528.4 |
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| CDS TCA 72 bp | GGTGGCTGCTGCTCCCACCCGGCCTGCCCTGCAGCCTaGACATCGCCCTCCTCGCTTCGCGGCTGGGGGACC | + |
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Preference number: 6 (lower is better) Translates to: GGCCSHPACPAA*TSPSSLRGWGT Trigger: GGTCCCCCAGCCGCGAAGCGAGGAGGGCGATGTTCAGGCTGCAGGGCAGGCCGGGTGGGAGCAGCAGCCACC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS GCA 72 bp | CCTGCAGGCTGCAGCGTGCGGCGCCCGAGTGAACACTaGACCGAGGCGTCGCGGCGCGGGTTCACCTGCACC | + |
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Preference number: 6 (lower is better) Translates to: PAGCSVRRPSEH*TEASRRGFTCT Trigger: GGTGCAGGTGAACCCGCGCCGCGACGCCTCGGTGCAGTGTTCACTCGGGCGCCGCACGCTGCAGCCTGCAGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073528.4 |
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| CDS GCA 72 bp | GATCGGGCGTCGGGGCTGGCTCGGCACCCTGCAGGCTaGAGCGTGCGGCGCCCGAGTGAACACTGCACCGAG | + |
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Preference number: 6 (lower is better) Translates to: DRASGLARHPAG*SVRRPSEHCTE Trigger: CTCGGTGCAGTGTTCACTCGGGCGCCGCACGCTGCAGCCTGCAGGGTGCCGAGCCAGCCCCGACGCCCGATC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073528.4 |
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| CDS CCA 72 bp | CTGCATCGCCGCCACACTGTTCCGGTCCTCCGGTGGTaGCTGCTGCTCCCACCCGGCCTGCCCTGCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LHRRHTVPVLRW*LLLPPGLPCSL Trigger: CAGGCTGCAGGGCAGGCCGGGTGGGAGCAGCAGCCACCACCGGAGGACCGGAACAGTGTGGCGGCGATGCAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS GCA 72 bp | CCGGGGACCCATCCGCGACAGCAGGGCCATGAGCTGTaGCCGCTGGTGGCTGTCGACGTACTCCGCGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: PGTHPRQQGHEL*PLVAVDVLRGH Trigger: ATGGCCGCGGAGTACGTCGACAGCCACCAGCGGGCACAGCTCATGGCCCTGCTGTCGCGGATGGGTCCCCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073528.4 |
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| CDS GCA 72 bp | CACCTCTCTCGGCTCCGGTTCCCGGGTCCCCGAGGATaGCGGGCTCCCCTCTCCCTTCGTGGGTGTCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: HLSRLRFPGPRG*RAPLSLRGCLP Trigger: AGGCAGACACCCACGAAGGGAGAGGGGAGCCCGGCATCCTCGGGGACCCGGGAACCGGAGCCGAGAGAGGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS GCA 72 bp | ATGCCGGGCTCCCCTCTCCCTTCGTGGGTGTCTGCCTaGCTCCCGCAACCTCCAGTGAGGAGGAGAGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: MPGSPLPSWVSA*LPQPPVRRRGH Trigger: GTGGCCTCTCCTCCTCACTGGAGGTTGCGGGAGGCAGGCAGACACCCACGAAGGGAGAGGGGAGCCCGGCAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS GCA 72 bp | GAGGATGCCGGGCTCCCCTCTCCCTTCGTGGGTGTCTaGCTGCCTCCCGCAACCTCCAGTGAGGAGGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: EDAGLPSPFVGV*LPPATSSEEER Trigger: CCTCTCCTCCTCACTGGAGGTTGCGGGAGGCAGGCAGACACCCACGAAGGGAGAGGGGAGCCCGGCATCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS GCA 72 bp | GCGGCAGGACATGGCTCCTCGCTCCCAGGCTCAGACTaGATCGCCGCCACACTGTTCCGGTCCTCCGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: AAGHGSSLPGSD*IAATLFRSSGG Trigger: ACCACCGGAGGACCGGAACAGTGTGGCGGCGATGCAGTCTGAGCCTGGGAGCGAGGAGCCATGTCCTGCCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS CCA 72 bp | ATCACCGGGGTCCTGAGCCATCTCTGCGGCAGGACATaGCTCCTCGCTCCCAGGCTCAGACTGCATCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: ITGVLSHLCGRT*LLAPRLRLHRR Trigger: GCGGCGATGCAGTCTGAGCCTGGGAGCGAGGAGCCATGTCCTGCCGCAGAGATGGCTCAGGACCCCGGTGAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS GCA 72 bp | AGGGGCATCCGAATCACCGGGGTCCTGAGCCATCTCTaGGGCAGGACATGGCTCCTCGCTCCCAGGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: RGIRITGVLSHL*GRTWLLAPRLR Trigger: TCTGAGCCTGGGAGCGAGGAGCCATGTCCTGCCGCAGAGATGGCTCAGGACCCCGGTGATTCGGATGCCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS CAA 72 bp | CTGGAAACGCAGGCGCTCCTTGTCCTGCTCCGTGCTTaGCGGGGAGGCCTGGTCTCGAGGGGCATCCGAATC | + |
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Preference number: 6 (lower is better) Translates to: LETQALLVLLRA*RGGLVSRGIRI Trigger: GATTCGGATGCCCCTCGAGACCAGGCCTCCCCGCAAAGCACGGAGCAGGACAAGGAGCGCCTGCGTTTCCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS TCA 72 bp | CTTCGTGGGTGTCTGCCTGCCTCCCGCAACCTCCAGTaGGGAGGAGAGGCCACAGAAGGTCACGGACGAGAA | + |
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Preference number: 6 (lower is better) Translates to: LRGCLPASRNLQ*GGEATEGHGRE Trigger: TTCTCGTCCGTGACCTTCTGTGGCCTCTCCTCCTCACTGGAGGTTGCGGGAGGCAGGCAGACACCCACGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073528.4 ENSMUST00000202174.2 |
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| CDS GCA 72 bp | TGCTCTAAGAACTGGAAACGCAGGCGCTCCTTGTCCTaGTCCGTGCTTTGCGGGGAGGCCTGGTCTCGAGGG | + |
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Preference number: 6 (lower is better) Translates to: CSKNWKRRRSLS*SVLCGEAWSRG Trigger: CCCTCGAGACCAGGCCTCCCCGCAAAGCACGGAGCAGGACAAGGAGCGCCTGCGTTTCCAGTTCTTAGAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073528.4 |
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| CDS GCA 72 bp | CTTTTACAACTCTGGAAACGCAGGCGCTCCTTGTCCTaGTCCGTGCTTTGCGGGGAGGCCTGGTCTCGAGGG | + |
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Preference number: 6 (lower is better) Translates to: LLQLWKRRRSLS*SVLCGEAWSRG Trigger: CCCTCGAGACCAGGCCTCCCCGCAAAGCACGGAGCAGGACAAGGAGCGCCTGCGTTTCCAGAGTTGTAAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000202174.2 |
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| CDS CAA 72 bp | TCTGACTGGGCAGGCACATCTAGTTCTTTTACAACTTaGACAGGTGATGTCCTCCACTCTGTAAGGGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: SDWAGTSSSFTT*TGDVLHSVRVV Trigger: TACAACCCTTACAGAGTGGAGGACATCACCTGTCAAAGTTGTAAAAGAACTAGATGTGCCTGCCCAGTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073528.4 |
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