Pregenerated sensors for ZAP70 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026117Ensembl transcript IDs: ENSMUST00000027291.7, ENSMUST00000185871.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGGAGGACTCTGGGCTCCCACTCAGAAACAGCGGAAGTAGACTTTaGGAGCACACATCCTCTCAGCCCACTGGTGATGTTTACCAATAT | + |
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Preference number: 1 (lower is better) Translates to: LEDSGLPLRNSGSRL*EHTSSQPTGDVYQY Trigger: ATATTGGTAAACATCACCAGTGGGCTGAGAGGATGTGTGCTCCCAAAGTCTACTTCCGCTGTTTCTGAGTGGGAGCCCAGAGTCCTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| 3UTR-3UTR CCA 90 bp | CCAAGAGAAGTGGAGTTTATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGATCAGCCCCAGCCCATaGGGCGGGGCGAATCACATG | + |
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Preference number: 2 (lower is better) Translates to: PREVEFILMLTVTPGGLWISPSP*GGANHM Trigger: CATGTGATTCGCCCCGCCCCATGGGCTGGGGCTGAT...CCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAATAAACTCCACTTCTCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| 3UTR CCA 72 bp | GGTGATGTTTACCAATATCCCATCAGCCCCAGCCCATaGGGCGGGGCGAATCACATGGGACAGTCGATAGGG | + |
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Preference number: 3 (lower is better) Translates to: GDVYQYPISPSP*GGANHMGQSIG Trigger: CCCTATCGACTGTCCCATGTGATTCGCCCCGCCCCATGGGCTGGGGCTGATGGGATATTGGTAAACATCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| 3UTR CCA 72 bp | AGAAGTGGAGTTTATTCTGATGCTGACAGTGACCCCTaGAGGACTCTGGGCTCCCACTCAGAAACAGCGGAA | + |
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Preference number: 3 (lower is better) Translates to: RSGVYSDADSDP*RTLGSHSETAE Trigger: TTCCGCTGTTTCTGAGTGGGAGCCCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAATAAACTCCACTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR GCA 90 bp | TCACATGGGACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGTCCTGCCAGCTTCAGGTaGTCCTCGGCCTCAGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: SHGTVDRAPEHRSSWTEGPASFR*SSASAR Trigger: GCGGGCTGAGGCCGAGGAGCACCTGAAGCTGGCAGG...ACCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGTCCCATGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR GCA 90 bp | ACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGTGTAGGGAGGACAGCCCGTCGGCCATaGCTGCCAGCTTCAGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: TVDRAPEHRSSWTEGVGRTARRP*LPASGA Trigger: AGCACCTGAAGCTGGCAGGCATGGCCGACGGGCTGT...CCTCCCTACACCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR GCA 90 bp | CATGGGACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGTGTAACGGCTTACGCAGGTTaGAGGGCAGCCCGTCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: HGTVDRAPEHRSSWTEGVTAYAG*RAARRG Trigger: ACCCCGACGGGCTGCCCTGCAACCTGCGTAAGCCGT...TACACCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGTCCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR TCA 90 bp | GAATCACATGGGACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGCCTGGCACACGCCGATaGGCCGCACGATGTAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: ESHGTVDRAPEHRSSWTEPGTRR*AARCRG Trigger: ACCCCTACATCGTGCGGCTCATCGGCGTGTGCCAGG...CTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGTCCCATGTGATTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR GCA 90 bp | AGAAGTGGAGTTTATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGGCTCCCCCGTCGGCCATGCCTaGCAGCTTCAGGTGCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: RSGVYSDADSDPWRTLGSPVGHA*QLQVLL Trigger: GAGGAGCACCTGAAGCTGGCAGGCATGGCCGACGGG...GGAGCCCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAATAAACTCCACTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR GCA 90 bp | GAATCACATGGGACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGTGGGTGCAGCAACTaGCGCGCTGGCGCTGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: ESHGTVDRAPEHRSSWTEGGCSN*RAGAAV Trigger: AACAGCAGCGCCAGCGCGGCAGTTGCTGCACCCACC...CTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGTCCCATGTGATTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CCA 90 bp | ACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGTGTAGGGAGGGAGCTTCTCCACCTGTaGGGCCTGGCTGATGATGGC | + |
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Preference number: 4 (lower is better) Translates to: TVDRAPEHRSSWTEGVGRELLHL*GLADDG Trigger: GCCATCATCAGCCAGGCCCCACAGGTGGAGAAGCTC...CCTCCCTACACCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR TCA 90 bp | AGAAGTGGAGTTTATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGGCTCCTGGCGTACGTGCCGTTaGGTTGGCGCTCGATGGGGA | + |
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Preference number: 4 (lower is better) Translates to: RSGVYSDADSDPWRTLGSWRTCR*VGARWG Trigger: TCCCCATCGAGCGCCAACTCAACGGCACGTACGCCA...GGAGCCCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAATAAACTCCACTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR TCA 90 bp | ATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGGCTCCCACTCAGAAACAGCGAGTCAGGCTGCTGTaGTACCAGGGCATTCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: ILMLTVTPGGLWAPTQKQRVRLL*YQGIRS Trigger: CGAGCGAATGCCCTGGTATCACAGCAGCCTGACTCG...CTGTTTCTGAGTGGGAGCCCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR TCA 90 bp | ACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGTGTAGGGAGGTGTCGAGCTGGTGCATaGTCTGGGCCTCTCGCATCA | + |
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Preference number: 4 (lower is better) Translates to: TVDRAPEHRSSWTEGVGRCRAGA*SGPLAS Trigger: TGATGCGAGAGGCCCAGATCATGCACCAGCTCGACA...CCTCCCTACACCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR TCA 90 bp | ATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGGCTCCCACTCAGAAACAGAGGCCTCCCACATGGTaGCCCCATAGCTCCAGACGT | + |
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Preference number: 4 (lower is better) Translates to: ILMLTVTPGGLWAPTQKQRPPTW*PHSSRR Trigger: ACGTCTGGAGCTATGGGGTCACCATGTGGGAGGCCT...CTGTTTCTGAGTGGGAGCCCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR GCA 90 bp | ACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGTGTAGGGAGGTGGCTGATGATGGCCTaGTCTAGTGCATCGCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: TVDRAPEHRSSWTEGVGRWLMMA*SSASPS Trigger: GGAGGGCGATGCACTAGAGCAGGCCATCATCAGCCA...CCTCCCTACACCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR GCA 90 bp | ATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGGCTCCCACTCAGAAACAGGGCCGGAATAGAGTTTaGGCTCGGCCTCCTCACGAG | + |
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Preference number: 4 (lower is better) Translates to: ILMLTVTPGGLWAPTQKQGRNRV*ARPPHE Trigger: CTCGTGAGGAGGCCGAGCGCAAACTCTATTCCGGCC...CTGTTTCTGAGTGGGAGCCCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR GCA 90 bp | GAATCACATGGGACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGGACAGTGCATATGTaGCCTGCTCCTTCCGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: ESHGTVDRAPEHRSSWTEGTVHM*PAPSGA Trigger: GGCCCCGGAAGGAGCAGGGCACATATGCACTGTCCC...CTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGTCCCATGTGATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR GCA 90 bp | ACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGTGTAGGGAGGCCCATGGCCACCTGGTaGAGCAGTTCAGCCACATTG | + |
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Preference number: 4 (lower is better) Translates to: TVDRAPEHRSSWTEGVGRPMATW*SSSATL Trigger: CAATGTGGCTGAACTGCTGCACCAGGTGGCCATGGG...CCTCCCTACACCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CCA 90 bp | CATGGGACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGTGTAGCTGCCATAGAAGAATaGCAGGTGCGCCGCGGGATC | + |
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Preference number: 4 (lower is better) Translates to: HGTVDRAPEHRSSWTEGVAAIEE*QVRRGI Trigger: GATCCCGCGGCGCACCTGCCATTCTTCTATGGCAGC...TACACCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGTCCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CCA 90 bp | GAATCACATGGGACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGAGGGAGCGCAAACACTaGCGCAGGAGGAACAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: ESHGTVDRAPEHRSSWTERERKH*RRRNSP Trigger: CGGGCTGTTCCTCCTGCGCCAGTGTTTGCGCTCCCT...CTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGTCCCATGTGATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CCA 90 bp | ATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGGCTCCCACTCAGAAACAGCGCTCGATGGGGAAATaGTGGAAGCGCACGTCGTGC | + |
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Preference number: 4 (lower is better) Translates to: ILMLTVTPGGLWAPTQKQRSMGK*WKRTSC Trigger: GCACGACGTGCGCTTCCACCATTTCCCCATCGAGCG...CTGTTTCTGAGTGGGAGCCCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CCA 90 bp | ATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGGCTCCCACTCAGAAACAGTCCACCTGTGGGGCCTaGCTGATGATGGCCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: ILMLTVTPGGLWAPTQKQSTCGA*LMMACS Trigger: AGAGCAGGCCATCATCAGCCAGGCCCCACAGGTGGA...CTGTTTCTGAGTGGGAGCCCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR GCA 90 bp | AGAAGTGGAGTTTATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGGCTCCAGTGCATATGTGCCCTaGTCCTTCCGGGGCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: RSGVYSDADSDPWRTLGSSAYVP*SFRGLS Trigger: GCTGAGGCCCCGGAAGGAGCAGGGCACATATGCACT...GGAGCCCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAATAAACTCCACTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR GCA 90 bp | ATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGGCTCCCACTCAGAAACAGCATGACCAGCATGAGTaGTTCTGCCTGGCACACGCC | + |
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Preference number: 4 (lower is better) Translates to: ILMLTVTPGGLWAPTQKQHDQHE*FCLAHA Trigger: GGCGTGTGCCAGGCAGAAGCACTCATGCTGGTCATG...CTGTTTCTGAGTGGGAGCCCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CCA 90 bp | TCACATGGGACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGTTCGATGGGGAAATGGTaGAAGCGCACGTCGTGCACC | + |
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Preference number: 4 (lower is better) Translates to: SHGTVDRAPEHRSSWTEGSMGKW*KRTSCT Trigger: GGTGCACGACGTGCGCTTCCACCATTTCCCCATCGA...ACCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGTCCCATGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CCA 90 bp | CATGGGACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGTGTACAGGGCATTCGCTCGTaGGCTGTGGTAGCAATGAGC | + |
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Preference number: 4 (lower is better) Translates to: HGTVDRAPEHRSSWTEGVQGIRS*AVVAMS Trigger: GCTCATTGCTACCACAGCCCACGAGCGAATGCCCTG...TACACCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGTCCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CCA 90 bp | CATGGGACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGTGTAACACACTTGTGTCCATaGGCATCGGCCGGGGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: HGTVDRAPEHRSSWTEGVTHLCP*ASAGAC Trigger: ACAAGCCCCGGCCGATGCCCATGGACACAAGTGTGT...TACACCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGTCCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR TCA 90 bp | CATGGGACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGTGTACCTGCTTCAGCACCTTaGTGGCCACGTCAATCTGCT | + |
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Preference number: 4 (lower is better) Translates to: HGTVDRAPEHRSSWTEGVPASAP*WPRQSA Trigger: AGCAGATTGACGTGGCCATCAAGGTGCTGAAGCAGG...TACACCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGTCCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR GCA 90 bp | TCACATGGGACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGTCAGCCCGCGAGATGCTaGCATAGAAGAATGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SHGTVDRAPEHRSSWTEGQPARC*HRRMAG Trigger: ACCTGCCATTCTTCTATGGCAGCATCTCGCGGGCTG...ACCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGTCCCATGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR GCA 90 bp | TCACATGGGACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGTCCTCACGAGTCAGGCTaGTGTGATACCAGGGCATTC | + |
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Preference number: 4 (lower is better) Translates to: SHGTVDRAPEHRSSWTEGPHESG*CDTRAF Trigger: GAATGCCCTGGTATCACAGCAGCCTGACTCGTGAGG...ACCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGTCCCATGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR GCA 90 bp | GAATCACATGGGACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGCCTTCTCTGTGCCCTaGTTCAGCACCTTGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: ESHGTVDRAPEHRSSWTEAFSVP*FSTLMA Trigger: GGCCATCAAGGTGCTGAAGCAGGGCACAGAGAAGGC...CTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGTCCCATGTGATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR GCA 90 bp | ATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGGCTCCCACTCAGAAACAGGCTGCCAGGTCGCGGTaGACAAAGTTTTTCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: ILMLTVTPGGLWAPTQKQAARSR*TKFFSS Trigger: GGAGGAGAAAAACTTTGTGCACCGCGACCTGGCAGC...CTGTTTCTGAGTGGGAGCCCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CCA 90 bp | ATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGGCTCCCACTCAGAAACAGTACGTGCCGTTGAGTTaGCGCTCGATGGGGAAATGG | + |
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Preference number: 4 (lower is better) Translates to: ILMLTVTPGGLWAPTQKQYVPLS*RSMGKW Trigger: CCATTTCCCCATCGAGCGCCAACTCAACGGCACGTA...CTGTTTCTGAGTGGGAGCCCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CCA 90 bp | AGAAGTGGAGTTTATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGGCTCCATGCCCATGGCCACCTaGTGCAGCAGTTCAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: RSGVYSDADSDPWRTLGSMPMAT*CSSSAT Trigger: TGTGGCTGAACTGCTGCACCAGGTGGCCATGGGCAT...GGAGCCCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAATAAACTCCACTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR GCA 90 bp | ATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGGCTCCCACTCAGAAACAGGCGTGTCAAACTTGGTaGCTTCGGGGATGCAGTACT | + |
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Preference number: 4 (lower is better) Translates to: ILMLTVTPGGLWAPTQKQACQTW*LRGCST Trigger: AGTACTGCATCCCCGAAGGCACCAAGTTTGACACGC...CTGTTTCTGAGTGGGAGCCCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR GCA 90 bp | GAATCACATGGGACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGCACGGAGCCAAAGTTaGCACAGCCAAGCTCGATGT | + |
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Preference number: 4 (lower is better) Translates to: ESHGTVDRAPEHRSSWTEARSQS*HSQARC Trigger: ACATCGAGCTTGGCTGTGGCAACTTTGGCTCCGTGC...CTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGTCCCATGTGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR GCA 90 bp | AGTGGAGTTTATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGGCTCCCACCCTCCAAATACTTCATaGCCATGGCCACCTGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: SGVYSDADSDPWRTLGSHPPNTS*PWPPGA Trigger: TGCACCAGGTGGCCATGGGCATGAAGTATTTGGAGG...GTGGGAGCCCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAATAAACTCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR GCA 90 bp | ACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGTGTAGGGAGGTCCATCCTCTTACCCTaGTTGATGAAGTCCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: TVDRAPEHRSSWTEGVGRSILLP*LMKSRT Trigger: GGTCCTGGACTTCATCAAGCAGGGTAAGAGGATGGA...CCTCCCTACACCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CCA 90 bp | CATGGGACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGTGTAAGCTGGTGCATGATCTaGGCCTCTCGCATCATCTCA | + |
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Preference number: 4 (lower is better) Translates to: HGTVDRAPEHRSSWTEGVSWCMI*ASRIIS Trigger: TGAGATGATGCGAGAGGCCCAGATCATGCACCAGCT...TACACCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGTCCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR TCA 90 bp | AGAAGTGGAGTTTATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGGCTCCACAGGCCAAAGTCGCTaGTCTTGGCATAGTGCCGAT | + |
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Preference number: 4 (lower is better) Translates to: RSGVYSDADSDPWRTLGSTGQSR*SWHSAD Trigger: ATCGGCACTATGCCAAGATCAGCGACTTTGGCCTGT...GGAGCCCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAATAAACTCCACTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR GCA 90 bp | CCAAGAGAAGTGGAGTTTATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGAGCTCCAGACGTCACTaGGGCTGGAGAACTTCCGAA | + |
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Preference number: 4 (lower is better) Translates to: PREVEFILMLTVTPGGLWSSRRH*GWRTSE Trigger: TTCGGAAGTTCTCCAGCCGCAGTGACGTCTGGAGCT...CCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAATAAACTCCACTTCTCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CCA 90 bp | GAATCACATGGGACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGAGAGCGTGTCAAACTTaGTGCCTTCGGGGATGCAGT | + |
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Preference number: 4 (lower is better) Translates to: ESHGTVDRAPEHRSSWTERACQT*CLRGCS Trigger: ACTGCATCCCCGAAGGCACCAAGTTTGACACGCTCT...CTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGTCCCATGTGATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR GCA 90 bp | CCAAGAGAAGTGGAGTTTATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGGCAGTTCAGCCACATTaGTCACAGGGATCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PREVEFILMLTVTPGGLWAVQPH*SQGSPP Trigger: AGGAGGAGATCCCTGTGAGCAATGTGGCTGAACTGC...CCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAATAAACTCCACTTCTCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR GCA 90 bp | TCACATGGGACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGTGCAGTCACTCATAAGTaGATACATCTCAGGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: SHGTVDRAPEHRSSWTEGAVTHK*IHLRRT Trigger: TGTCCTCCTGAGATGTATGCACTTATGAGTGACTGC...ACCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGTCCCATGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS GCA 90 bp | CCAGGGAGCGCAAACACTGGCGCAGGAGGAACAGCCCGTCGGCCATaGCTGCCAGCTTCAGGTGCTCCTCGGCCTCAGCCCGCGAGATGC | + |
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Preference number: 5 (lower is better) Translates to: PGSANTGAGGTARRP*LPASGAPRPQPARC Trigger: GCATCTCGCGGGCTGAGGCCGAGGAGCACCTGAAGCTGGCAGGCATGGCCGACGGGCTGTTCCTCCTGCGCCAGTGTTTGCGCTCCCTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027291.7 ENSMUST00000185871.2 |
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| CDS GCA 90 bp | GCTGTGGCTCCAGTCCGGGCGGCCGGTTACACGGCTTACGCAGGTTaGAGGGCAGCCCGTCGGGGTCCTGAGAGTAGAACTGGCAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: AVAPVRAAGYTAYAG*RAARRGPESRTGRA Trigger: AGCTCTGCCAGTTCTACTCTCAGGACCCCGACGGGCTGCCCTGCAACCTGCGTAAGCCGTGTAACCGGCCGCCCGGACTGGAGCCACAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS CCA 90 bp | GTCGCGCACCATAGCATCACGCAGGCAGTCGAAGACCCCGGGCTGTaGCTCCAGTCCGGGCGGCCGGTTACACGGCTTACGCAGGTTGCA | + |
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Preference number: 5 (lower is better) Translates to: VAHHSITQAVEDPGL*LQSGRPVTRLTQVA Trigger: TGCAACCTGCGTAAGCCGTGTAACCGGCCGCCCGGACTGGAGCCACAGCCCGGGGTCTTCGACTGCCTGCGTGATGCTATGGTGCGCGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CAA 90 bp | ACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGTGTAGGGAGGCACGGCTTACGCAGGTaGCAGGGCAGCCCGTCGGGG | + |
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Preference number: 5 (lower is better) Translates to: TVDRAPEHRSSWTEGVGRHGLRR*QGSPSG Trigger: CCCCGACGGGCTGCCCTGCAACCTGCGTAAGCCGTG...CCTCCCTACACCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS GCA 90 bp | GCCTCAGCAGGAACTTGCCGTCGGTCTGCTGGCCGGAATAGAGTTTaGGCTCGGCCTCCTCACGAGTCAGGCTGCTGTGATACCAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: ASAGTCRRSAGRNRV*ARPPHESGCCDTRA Trigger: TGCCCTGGTATCACAGCAGCCTGACTCGTGAGGAGGCCGAGCGCAAACTCTATTCCGGCCAGCAGACCGACGGCAAGTTCCTGCTGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS GCA 90 bp | ATGGGTGGGCTGGGAGGGTGGGTGCAGCAACTGCCGCGCTGGCGCTaGTGTTGGGACAGACCTCCTTCAAGCGGTAAATTAGTCCATCCG | + |
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Preference number: 5 (lower is better) Translates to: MGGLGGWVQQLPRWR*CWDRPPSSGKLVHP Trigger: CGGATGGACTAATTTACCGCTTGAAGGAGGTCTGTCCCAACAGCAGCGCCAGCGCGGCAGTTGCTGCACCCACCCTCCCAGCCCACCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS CCA 90 bp | CAGCCTCGGCCACCTGTTCACACTGTGGGGGTCCCTCGGCCCGGCTaGCCAGGCTGTAGTAATAGTTCCGCATACGTTGTTCCACAGTCA | + |
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Preference number: 5 (lower is better) Translates to: QPRPPVHTVGVPRPG*PGCSNSSAYVVPQS Trigger: TGACTGTGGAACAACGTATGCGGAACTATTACTACAGCCTGGCCAGCCGGGCCGAGGGACCCCCACAGTGTGAACAGGTGGCCGAGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CAA 90 bp | CATGGGACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGTGTAGGCCTCAGCAGGAACTaGCCGTCGGTCTGCTGGCCG | + |
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Preference number: 5 (lower is better) Translates to: HGTVDRAPEHRSSWTEGVGLSRN*PSVCWP Trigger: CGGCCAGCAGACCGACGGCAAGTTCCTGCTGAGGCC...TACACCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGTCCCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS GCA 90 bp | GCTTCTTGCGCATGCGATAGACTCCCTGGCGCACGGAGCCAAAGTTaGCACAGCCAAGCTCGATGTCCGCCACGAGGAGATTCTCTCGCT | + |
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Preference number: 5 (lower is better) Translates to: ASCACDRLPGARSQS*HSQARCPPRGDSLA Trigger: AGCGAGAGAATCTCCTCGTGGCGGACATCGAGCTTGGCTGTGGCAACTTTGGCTCCGTGCGCCAGGGAGTCTATCGCATGCGCAAGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CAA 90 bp | ACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGTGTAGGGAGGATGGCGTACGTGCCGTaGAGTTGGCGCTCGATGGGG | + |
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Preference number: 5 (lower is better) Translates to: TVDRAPEHRSSWTEGVGRMAYVP*SWRSMG Trigger: CCCCATCGAGCGCCAACTCAACGGCACGTACGCCAT...CCTCCCTACACCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CAA 90 bp | AGAAGTGGAGTTTATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGGCTCCTTTCCCAGCAGGAACTaGTGCAGGGGCCCGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: RSGVYSDADSDPWRTLGSFPSRN*CRGPPP Trigger: GGGAGGCGGGCCCCTGCACAAGTTCCTGCTGGGAAA...GGAGCCCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAATAAACTCCACTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CAA 90 bp | ACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGTGTAGGGAGGTCAGCACCCAGGGCTTaGGACAGGCCAAAGTCGCTG | + |
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Preference number: 5 (lower is better) Translates to: TVDRAPEHRSSWTEGVGRSAPRA*DRPKSL Trigger: CAGCGACTTTGGCCTGTCCAAAGCCCTGGGTGCTGA...CCTCCCTACACCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CAA 90 bp | ATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGGCTCCCACTCAGAAACAGTCGGGGATGCAGTACTaGCCAGCCTTGTCCTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: ILMLTVTPGGLWAPTQKQSGMQY*PALSWL Trigger: CAGCCAGGACAAGGCTGGCAAGTACTGCATCCCCGA...CTGTTTCTGAGTGGGAGCCCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CAA 90 bp | ATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGGCTCCCACTCAGAAACAGTTGACCAGTAGAACATaGCGGGCTGCCAGGTCGCGG | + |
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Preference number: 5 (lower is better) Translates to: ILMLTVTPGGLWAPTQKQLTSRT*RAARSR Trigger: CCGCGACCTGGCAGCCCGCAATGTTCTACTGGTCAA...CTGTTTCTGAGTGGGAGCCCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CAA 90 bp | TCACATGGGACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGGGTGTACGTGCCGTTGAGTaGGCGCTCGATGGGGAAATG | + |
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Preference number: 5 (lower is better) Translates to: SHGTVDRAPEHRSSWTEGVRAVE*ALDGEM Trigger: CATTTCCCCATCGAGCGCCAACTCAACGGCACGTAC...ACCCTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGTCCCATGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CAA 90 bp | AGTGGAGTTTATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGGCTCCCACCAGAGCGTGTCAAACTaGGTGCCTTCGGGGATGCAG | + |
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Preference number: 5 (lower is better) Translates to: SGVYSDADSDPWRTLGSHQSVSN*VPSGMQ Trigger: CTGCATCCCCGAAGGCACCAAGTTTGACACGCTCTG...GTGGGAGCCCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAATAAACTCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CAA 90 bp | ATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGGCTCCCACTCAGAAACAGCCCTGCTTCAGCACCTaGATGGCCACGTCAATCTGC | + |
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Preference number: 5 (lower is better) Translates to: ILMLTVTPGGLWAPTQKQPCFST*MATSIC Trigger: GCAGATTGACGTGGCCATCAAGGTGCTGAAGCAGGG...CTGTTTCTGAGTGGGAGCCCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS GCA 90 bp | GATAGTGGTATACAGTTTTCCCATAGACCAGGGACAGTGCATATGTaGCCTGCTCCTTCCGGGGCCTCAGCAGGAACTTGCCGTCGGTCT | + |
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Preference number: 5 (lower is better) Translates to: DSGIQFSHRPGTVHM*PAPSGASAGTCRRS Trigger: AGACCGACGGCAAGTTCCTGCTGAGGCCCCGGAAGGAGCAGGGCACATATGCACTGTCCCTGGTCTATGGGAAAACTGTATACCACTATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS GCA 90 bp | TGGGCCTCTCGCATCATCTCATCTTTGTCGGCCTTCTCTGTGCCCTaGTTCAGCACCTTGATGGCCACGTCAATCTGCTTCTTGCGCATG | + |
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Preference number: 5 (lower is better) Translates to: WASRIISSLSAFSVP*FSTLMATSICFLRM Trigger: CATGCGCAAGAAGCAGATTGACGTGGCCATCAAGGTGCTGAAGCAGGGCACAGAGAAGGCCGACAAAGATGAGATGATGCGAGAGGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CAA 90 bp | AGTGGAGTTTATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGGCTCCCACCGCATCATCTCATCTTaGTCGGCCTTCTCTGTGCCC | + |
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Preference number: 5 (lower is better) Translates to: SGVYSDADSDPWRTLGSHRIISS*SAFSVP Trigger: GGGCACAGAGAAGGCCGACAAAGATGAGATGATGCG...GTGGGAGCCCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAATAAACTCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS GCA 90 bp | GTCGGGGCGATCCTCCCACTTGTAGATCCAGCAGTCACTCATAAGTaGATACATCTCAGGAGGACACTCCGGCGGACATTCCATCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: VGAILPLVDPAVTHK*IHLRRTLRRTFHPL Trigger: AAGAGGATGGAATGTCCGCCGGAGTGTCCTCCTGAGATGTATGCACTTATGAGTGACTGCTGGATCTACAAGTGGGAGGATCGCCCCGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CAA 90 bp | GAATCACATGGGACAGTCGATAGGGCTCCTGAACACAGGTCATCCTGGACAGAGAGCAGTTCAGCCACATaGCTCACAGGGATCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: ESHGTVDRAPEHRSSWTESSSAT*LTGISS Trigger: GGAGGAGATCCCTGTGAGCAATGTGGCTGAACTGCT...CTCTGTCCAGGATGACCTGTGTTCAGGAGCCCTATCGACTGTCCCATGTGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS TCA 90 bp | CCGCCACGAGGAGATTCTCTCGCTTCAGGAAGAGCTTCTTGTCTTTaGGTTCCTCAGGGTCGCTGTAGGGACTCTCGTACACACTTGTGT | + |
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Preference number: 5 (lower is better) Translates to: PPRGDSLASGRASCL*VPQGRCRDSRTHLC Trigger: ACACAAGTGTGTACGAGAGTCCCTACAGCGACCCTGAGGAACTCAAAGACAAGAAGCTCTTCCTGAAGCGAGAGAATCTCCTCGTGGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS-3UTR CAA 90 bp | AGAAGTGGAGTTTATTCTGATGCTGACAGTGACCCCTGGAGGACTCTGGGCTCCAAGAGCTTCTTGTCTTaGAGTTCCTCAGGGTCGCTG | + |
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Preference number: 5 (lower is better) Translates to: RSGVYSDADSDPWRTLGSKSFLS*SSSGSL Trigger: CAGCGACCCTGAGGAACTCAAAGACAAGAAGCTCTT...GGAGCCCAGAGTCCTCCAGGGGTCACTGTCAGCATCAGAATAAACTCCACTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS CCA 72 bp | GGTGGGCTGGGAGGGTGGGTGCAGCAACTGCCGCGCTaGCGCTGCTGTTGGGACAGACCTCCTTCAAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: GGLGGWVQQLPR*RCCWDRPPSSG Trigger: ACCGCTTGAAGGAGGTCTGTCCCAACAGCAGCGCCAGCGCGGCAGTTGCTGCACCCACCCTCCCAGCCCACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS GCA 72 bp | GCTTCAGGTGCTCCTCGGCCTCAGCCCGCGAGATGCTaGCATAGAAGAATGGCAGGTGCGCCGCGGGATCGG | + |
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Preference number: 6 (lower is better) Translates to: ASGAPRPQPARC*HRRMAGAPRDR Trigger: CCGATCCCGCGGCGCACCTGCCATTCTTCTATGGCAGCATCTCGCGGGCTGAGGCCGAGGAGCACCTGAAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027291.7 ENSMUST00000185871.2 |
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| CDS GCA 72 bp | CCAGTCCGGGCGGCCGGTTACACGGCTTACGCAGGTTaGAGGGCAGCCCGTCGGGGTCCTGAGAGTAGAACT | + |
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Preference number: 6 (lower is better) Translates to: PVRAAGYTAYAG*RAARRGPESRT Trigger: AGTTCTACTCTCAGGACCCCGACGGGCTGCCCTGCAACCTGCGTAAGCCGTGTAACCGGCCGCCCGGACTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS CCA 72 bp | TCAGCCACATGCAGCCTCGGCCACCTGTTCACACTGTaGGGGTCCCTCGGCCCGGCTGGCCAGGCTGTAGTA | + |
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Preference number: 6 (lower is better) Translates to: SATCSLGHLFTL*GSLGPAGQAVV Trigger: TACTACAGCCTGGCCAGCCGGGCCGAGGGACCCCCACAGTGTGAACAGGTGGCCGAGGCTGCATGTGGCTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS GCA 72 bp | CCAGCTTCAGGTGCTCCTCGGCCTCAGCCCGCGAGATaGTGCCATAGAAGAATGGCAGGTGCGCCGCGGGAT | + |
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Preference number: 6 (lower is better) Translates to: PASGAPRPQPAR*CHRRMAGAPRD Trigger: ATCCCGCGGCGCACCTGCCATTCTTCTATGGCAGCATCTCGCGGGCTGAGGCCGAGGAGCACCTGAAGCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027291.7 ENSMUST00000185871.2 |
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| CDS CCA 72 bp | GCGTACGTGCCGTTGAGTTGGCGCTCGATGGGGAAATaGTGGAAGCGCACGTCGTGCACCAACGACAGCACG | + |
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Preference number: 6 (lower is better) Translates to: AYVPLSWRSMGK*WKRTSCTNDST Trigger: CGTGCTGTCGTTGGTGCACGACGTGCGCTTCCACCATTTCCCCATCGAGCGCCAACTCAACGGCACGTACGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027291.7 ENSMUST00000185871.2 |
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| CDS TCA 72 bp | AGTTTGCGCTCGGCCTCCTCACGAGTCAGGCTGCTGTaGTACCAGGGCATTCGCTCGTGGGCTGTGGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: SLRSASSRVRLL*YQGIRSWAVVA Trigger: TGCTACCACAGCCCACGAGCGAATGCCCTGGTATCACAGCAGCCTGACTCGTGAGGAGGCCGAGCGCAAACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS GCA 72 bp | GGAACTTGCCGTCGGTCTGCTGGCCGGAATAGAGTTTaGGCTCGGCCTCCTCACGAGTCAGGCTGCTGTGAT | + |
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Preference number: 6 (lower is better) Translates to: GTCRRSAGRNRV*ARPPHESGCCD Trigger: ATCACAGCAGCCTGACTCGTGAGGAGGCCGAGCGCAAACTCTATTCCGGCCAGCAGACCGACGGCAAGTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS GCA 72 bp | AATAGAGTTTGCGCTCGGCCTCCTCACGAGTCAGGCTaGTGTGATACCAGGGCATTCGCTCGTGGGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: NRVCARPPHESG*CDTRAFARGLW Trigger: CCACAGCCCACGAGCGAATGCCCTGGTATCACAGCAGCCTGACTCGTGAGGAGGCCGAGCGCAAACTCTATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS CCA 72 bp | CCACCTGTTCACACTGTGGGGGTCCCTCGGCCCGGCTaGCCAGGCTGTAGTAATAGTTCCGCATACGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: PPVHTVGVPRPG*PGCSNSSAYVV Trigger: AACAACGTATGCGGAACTATTACTACAGCCTGGCCAGCCGGGCCGAGGGACCCCCACAGTGTGAACAGGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS CAA 72 bp | TCGTACACACTTGTGTCCATGGGCATCGGCCGGGGCTaGTCTGTCGATGACGCTAAGCGTGCTGGTTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SYTLVSMGIGRG*SVDDAKRAGSG Trigger: CCCTGAACCAGCACGCTTAGCGTCATCGACAGACAAGCCCCGGCCGATGCCCATGGACACAAGTGTGTACGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS CAA 90 bp | TCCCTCGGCCCGGCTGGCCAGGCTGTAGTAATAGTTCCGCATACGTaGTTCCACAGTCAGGAAGTCGGGGCGATCCTCCCACTTGTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: SLGPAGQAVVIVPHT*FHSQEVGAILPLVD Trigger: ATCTACAAGTGGGAGGATCGCCCCGACTTCCTGACTGTGGAACAACGTATGCGGAACTATTACTACAGCCTGGCCAGCCGGGCCGAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS CAA 72 bp | CCGGCTGGCCAGGCTGTAGTAATAGTTCCGCATACGTaGTTCCACAGTCAGGAAGTCGGGGCGATCCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PAGQAVVIVPHT*FHSQEVGAILP Trigger: TGGGAGGATCGCCCCGACTTCCTGACTGTGGAACAACGTATGCGGAACTATTACTACAGCCTGGCCAGCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS CAA 72 bp | GGACACTCCGGCGGACATTCCATCCTCTTACCCTGCTaGATGAAGTCCAGGACCTCGGGGCCCTTCATTTTC | + |
|
Preference number: 6 (lower is better) Translates to: GHSGGHSILLPC*MKSRTSGPFIF Trigger: GAAAATGAAGGGCCCCGAGGTCCTGGACTTCATCAAGCAGGGTAAGAGGATGGAATGTCCGCCGGAGTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS GCA 72 bp | ATACAGTTTTCCCATAGACCAGGGACAGTGCATATGTaGCCTGCTCCTTCCGGGGCCTCAGCAGGAACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: IQFSHRPGTVHM*PAPSGASAGTC Trigger: GCAAGTTCCTGCTGAGGCCCCGGAAGGAGCAGGGCACATATGCACTGTCCCTGGTCTATGGGAAAACTGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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| CDS TCA 72 bp | GGAGATTCTCTCGCTTCAGGAAGAGCTTCTTGTCTTTaGGTTCCTCAGGGTCGCTGTAGGGACTCTCGTACA | + |
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Preference number: 6 (lower is better) Translates to: GDSLASGRASCL*VPQGRCRDSRT Trigger: TGTACGAGAGTCCCTACAGCGACCCTGAGGAACTCAAAGACAAGAAGCTCTTCCTGAAGCGAGAGAATCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027291.7 |
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