RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZAN (Mus musculus)

Ensembl gene IDs: ENSMUSG00000079173

Ensembl transcript IDs: ENSMUST00000117564.8, ENSMUST00000150470.2, ENSMUST00000164178.2

Found 496 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATTGACAGATGCAGCCTTCCTTGCAAGAGGAGGGGACTTTGGGACTaGCTCCCTTACAGAGGCCATCCGGGTCCAAGCAGGAAGGCAGAC +
Preference number: 1 (lower is better)
Translates to: IDRCSLPCKRRGLWD*LPYRGHPGPSRKAD
Trigger: GTCTGCCTTCCTGCTTGGACCCGGATGGCCTCTGTAAGGGAGCCAGTCCCAAAGTCCCCTCCTCTTGCAAGGAAGGCTGCATCTGTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
3UTR CCA 90 bp AGCCAGATTGACAGATGCAGCCTTCCTTGCAAGAGGAGGGGACTTTaGGACTGGCTCCCTTACAGAGGCCATCCGGGTCCAAGCAGGAAG +
Preference number: 1 (lower is better)
Translates to: SQIDRCSLPCKRRGL*DWLPYRGHPGPSRK
Trigger: CTTCCTGCTTGGACCCGGATGGCCTCTGTAAGGGAGCCAGTCCCAAAGTCCCCTCCTCTTGCAAGGAAGGCTGCATCTGTCAATCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
3UTR CCA 90 bp GGCGCAGTTACTGTTGCCATCTTCATTGTCCTTGCAGTAAGTCCCTaGGGGACACTGGGAACTCTGGCACTGAACAGCCCCTCCCATGCA +
Preference number: 1 (lower is better)
Translates to: GAVTVAIFIVLAVSP*GTLGTLALNSPSHA
Trigger: TGCATGGGAGGGGCTGTTCAGTGCCAGAGTTCCCAGTGTCCCCCAGGGACTTACTGCAAGGACAATGAAGATGGCAACAGTAACTGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
3UTR GCA 90 bp GGCTGTGGGCTGGGCACTGCAGAGTTATTTTGGCGCAGTTACTGTTaGCATCTTCATTGTCCTTGCAGTAAGTCCCTGGGGGACACTGGG +
Preference number: 1 (lower is better)
Translates to: GCGLGTAELFWRSYC*HLHCPCSKSLGDTG
Trigger: CCCAGTGTCCCCCAGGGACTTACTGCAAGGACAATGAAGATGGCAACAGTAACTGCGCCAAAATAACTCTGCAGTGCCCAGCCCACAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
3UTR GCA 90 bp TGTTGTTACTCAGCACGTAGCCAGATTGACAGATGCAGCCTTCCTTaGAAGAGGAGGGGACTTTGGGACTGGCTCCCTTACAGAGGCCAT +
Preference number: 1 (lower is better)
Translates to: CCYSARSQIDRCSLP*KRRGLWDWLPYRGH
Trigger: ATGGCCTCTGTAAGGGAGCCAGTCCCAAAGTCCCCTCCTCTTGCAAGGAAGGCTGCATCTGTCAATCTGGCTACGTGCTGAGTAACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
3UTR GCA 90 bp AGACAGGAGGGAAGGCAGTTGGTGAATAGGCTGTGGGCTGGGCACTaGAGAGTTATTTTGGCGCAGTTACTGTTGCCATCTTCATTGTCC +
Preference number: 1 (lower is better)
Translates to: RQEGRQLVNRLWAGH*RVILAQLLLPSSLS
Trigger: GGACAATGAAGATGGCAACAGTAACTGCGCCAAAATAACTCTGCAGTGCCCAGCCCACAGCCTATTCACCAACTGCCTTCCCTCCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
3UTR GCA 90 bp GCAGAGTTATTTTGGCGCAGTTACTGTTGCCATCTTCATTGTCCTTaGAGTAAGTCCCTGGGGGACACTGGGAACTCTGGCACTGAACAG +
Preference number: 1 (lower is better)
Translates to: AELFWRSYCCHLHCP*SKSLGDTGNSGTEQ
Trigger: CTGTTCAGTGCCAGAGTTCCCAGTGTCCCCCAGGGACTTACTGCAAGGACAATGAAGATGGCAACAGTAACTGCGCCAAAATAACTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
3UTR-3UTR CCA 90 bp GGGACTTTGGGACTGGCTCCCTTACAGAGGCCATCCGGGTCCAAGCAGGAAGGCTTGGTGAATAGGCTGTaGGCTGGGCACTGCAGAGTT +
Preference number: 2 (lower is better)
Translates to: GTLGLAPLQRPSGSKQEGLVNRL*AGHCRV
Trigger: AACTCTGCAGTGCCCAGCCCACAGCCTATTCACCAA...GCCTTCCTGCTTGGACCCGGATGGCCTCTGTAAGGGAGCCAGTCCCAAAGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
3UTR-3UTR TCA 90 bp ACTTGTTGTTACTCAGCACGTAGCCAGATTGACAGATGCAGCCTTCCTTGCAAGAGGGAAGGCAGTTGGTaGATAGGCTGTGGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: TCCYSARSQIDRCSLPCKREGSW*IGCGLG
Trigger: GCCCAGCCCACAGCCTATTCACCAACTGCCTTCCCT...CTTGCAAGGAAGGCTGCATCTGTCAATCTGGCTACGTGCTGAGTAACAACAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
3UTR-3UTR GCA 90 bp TTGACAGATGCAGCCTTCCTTGCAAGAGGAGGGGACTTTGGGACTGGCTCCCTTCATCTTCATTGTCCTTaGAGTAAGTCCCTGGGGGAC +
Preference number: 2 (lower is better)
Translates to: LTDAAFLARGGDFGTGSLHLHCP*SKSLGD
Trigger: GTCCCCCAGGGACTTACTGCAAGGACAATGAAGATG...AAGGGAGCCAGTCCCAAAGTCCCCTCCTCTTGCAAGGAAGGCTGCATCTGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
3UTR-3UTR CCA 90 bp GCAGGCACTTGTTGTTACTCAGCACGTAGCCAGATTGACAGATGCAGCCTTCCTCTTGCAGTAAGTCCCTaGGGGACACTGGGAACTCTG +
Preference number: 2 (lower is better)
Translates to: AGTCCYSARSQIDRCSLPLAVSP*GTLGTL
Trigger: CAGAGTTCCCAGTGTCCCCCAGGGACTTACTGCAAG...AGGAAGGCTGCATCTGTCAATCTGGCTACGTGCTGAGTAACAACAAGTGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
3UTR-3UTR CCA 90 bp GCAGAGTTATTTTGGCGCAGTTACTGTTGCCATCTTCATTGTCCTTGCAGTAAGGCTCTGGGTACAGCCTaGGGAGGTCCAGGTCTTGCC +
Preference number: 2 (lower is better)
Translates to: AELFWRSYCCHLHCPCSKALGTA*GGPGLA
Trigger: GGCAAGACCTGGACCTCCCCAGGCTGTACCCAGAGC...CTTACTGCAAGGACAATGAAGATGGCAACAGTAACTGCGCCAAAATAACTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
3UTR CAA 90 bp ACGATTTCTGAGCAGGCACTTGTTGTTACTCAGCACGTAGCCAGATaGACAGATGCAGCCTTCCTTGCAAGAGGAGGGGACTTTGGGACT +
Preference number: 2 (lower is better)
Translates to: TISEQALVVTQHVAR*TDAAFLARGGDFGT
Trigger: AGTCCCAAAGTCCCCTCCTCTTGCAAGGAAGGCTGCATCTGTCAATCTGGCTACGTGCTGAGTAACAACAAGTGCCTGCTCAGAAATCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
3UTR-3UTR TCA 90 bp GAGTTATTTTGGCGCAGTTACTGTTGCCATCTTCATTGTCCTTGCAGTAAGTCCTGGGAACTCTGGCACTaGACAGCCCCTCCCATGCAG +
Preference number: 2 (lower is better)
Translates to: ELFWRSYCCHLHCPCSKSWELWH*TAPPMQ
Trigger: CTGCATGGGAGGGGCTGTTCAGTGCCAGAGTTCCCA...GGACTTACTGCAAGGACAATGAAGATGGCAACAGTAACTGCGCCAAAATAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
3UTR-3UTR GCA 90 bp CAGGCACTTGTTGTTACTCAGCACGTAGCCAGATTGACAGATGCAGCCTTCCTTTGGCGCAGTTACTGTTaGCATCTTCATTGTCCTTGC +
Preference number: 2 (lower is better)
Translates to: QALVVTQHVARLTDAAFLWRSYC*HLHCPC
Trigger: GCAAGGACAATGAAGATGGCAACAGTAACTGCGCCA...AAGGAAGGCTGCATCTGTCAATCTGGCTACGTGCTGAGTAACAACAAGTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
3UTR-3UTR CAA 90 bp TTGACAGATGCAGCCTTCCTTGCAAGAGGAGGGGACTTTGGGACTGGCTCCCTTCAGGAGGGAAGGCAGTaGGTGAATAGGCTGTGGGCT +
Preference number: 3 (lower is better)
Translates to: LTDAAFLARGGDFGTGSLQEGRQ*VNRLWA
Trigger: AGCCCACAGCCTATTCACCAACTGCCTTCCCTCCTG...AAGGGAGCCAGTCCCAAAGTCCCCTCCTCTTGCAAGGAAGGCTGCATCTGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
3UTR-3UTR CAA 90 bp CTTTGGGACTGGCTCCCTTACAGAGGCCATCCGGGTCCAAGCAGGAAGGCAGACCACTGCAGAGTTATTTaGGCGCAGTTACTGTTGCCA +
Preference number: 3 (lower is better)
Translates to: LWDWLPYRGHPGPSRKADHCRVI*AQLLLP
Trigger: TGGCAACAGTAACTGCGCCAAAATAACTCTGCAGTG...GTCTGCCTTCCTGCTTGGACCCGGATGGCCTCTGTAAGGGAGCCAGTCCCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
3UTR CCA 72 bp ACTGTTGCCATCTTCATTGTCCTTGCAGTAAGTCCCTaGGGGACACTGGGAACTCTGGCACTGAACAGCCCC +
Preference number: 3 (lower is better)
Translates to: TVAIFIVLAVSP*GTLGTLALNSP
Trigger: GGGGCTGTTCAGTGCCAGAGTTCCCAGTGTCCCCCAGGGACTTACTGCAAGGACAATGAAGATGGCAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
3UTR CCA 72 bp GGCAGACAGGAGGGAAGGCAGTTGGTGAATAGGCTGTaGGCTGGGCACTGCAGAGTTATTTTGGCGCAGTTA +
Preference number: 3 (lower is better)
Translates to: GRQEGRQLVNRL*AGHCRVILAQL
Trigger: TAACTGCGCCAAAATAACTCTGCAGTGCCCAGCCCACAGCCTATTCACCAACTGCCTTCCCTCCTGTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
3UTR-3UTR CAA 90 bp AGACAGGAGGGAAGGCAGTTGGTGAATAGGCTGTGGGCTGGGCACTGCAGAGTTTTGGCGCAGTTACTGTaGCCATCTTCATTGTCCTTG +
Preference number: 3 (lower is better)
Translates to: RQEGRQLVNRLWAGHCRVLAQLL*PSSLSL
Trigger: CAAGGACAATGAAGATGGCAACAGTAACTGCGCCAA...AACTCTGCAGTGCCCAGCCCACAGCCTATTCACCAACTGCCTTCCCTCCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
3UTR GCA 72 bp GGAAGGCAGTTGGTGAATAGGCTGTGGGCTGGGCACTaGAGAGTTATTTTGGCGCAGTTACTGTTGCCATCT +
Preference number: 3 (lower is better)
Translates to: GRQLVNRLWAGH*RVILAQLLLPS
Trigger: AGATGGCAACAGTAACTGCGCCAAAATAACTCTGCAGTGCCCAGCCCACAGCCTATTCACCAACTGCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
3UTR GCA 72 bp CTGGGCACTGCAGAGTTATTTTGGCGCAGTTACTGTTaGCATCTTCATTGTCCTTGCAGTAAGTCCCTGGGG +
Preference number: 3 (lower is better)
Translates to: LGTAELFWRSYC*HLHCPCSKSLG
Trigger: CCCCAGGGACTTACTGCAAGGACAATGAAGATGGCAACAGTAACTGCGCCAAAATAACTCTGCAGTGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
CDS-3UTR TCA 90 bp CTTTGGGACTGGCTCCCTTACAGAGGCCATCCGGGTCCAAGCAGGAAGGCAGACAGTCACACTCAGCCCTaGGCACACACTTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: LWDWLPYRGHPGPSRKADSHTQP*AHTCHC
Trigger: ACAGTGACAAGTGTGTGCTCAGGGCTGAGTGTGACT...GTCTGCCTTCCTGCTTGGACCCGGATGGCCTCTGTAAGGGAGCCAGTCCCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
3UTR CAA 72 bp GTGAATAGGCTGTGGGCTGGGCACTGCAGAGTTATTTaGGCGCAGTTACTGTTGCCATCTTCATTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VNRLWAGHCRVI*AQLLLPSSLSL
Trigger: CAAGGACAATGAAGATGGCAACAGTAACTGCGCCAAAATAACTCTGCAGTGCCCAGCCCACAGCCTATTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
CDS GCA 90 bp CACAGACACAGCCCTCCTCGCAGGTGGAGGGGGCTTCGGGGCTGGTaGCCTCACAGTGGCCATCAGGGTCCGAGCAGGAAGGCTGACAGG +
Preference number: 5 (lower is better)
Translates to: HRHSPPRRWRGLRGW*PHSGHQGPSRKADR
Trigger: CCTGTCAGCCTTCCTGCTCGGACCCTGATGGCCACTGTGAGGGCACCAGCCCCGAAGCCCCCTCCACCTGCGAGGAGGGCTGTGTCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp ACTGGACAGCCCCTCCCACGCAGGCACAGCTCTGGGTGCAGCCCCTaGAGATCCAGGTCTTGCCTGCCGGGACAAAGCCACCCTGGGCGT +
Preference number: 5 (lower is better)
Translates to: TGQPLPRRHSSGCSP*RSRSCLPGQSHPGR
Trigger: ACGCCCAGGGTGGCTTTGTCCCGGCAGGCAAGACCTGGATCTCCAGGGGCTGCACCCAGAGCTGTGCCTGCGTGGGAGGGGCTGTCCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp CACAAACGCAGCCCTCCTTGCAGGTGGAGGGGGCTTCGGGGCTGGTaGCTCTACAGAGGCCATCTGGGTCAGAGCAGGAAGGCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: HKRSPPCRWRGLRGW*LYRGHLGQSRKAGR
Trigger: CCTGCCTGCCTTCCTGCTCTGACCCAGATGGCCTCTGTAGAGGCACCAGCCCCGAAGCCCCCTCCACCTGCAAGGAGGGCTGCGTTTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp CCACGCAGGCACAGCTCTGGGTGCAGCCCCTGGAGATCCAGGTCTTaGCTGCCGGGACAAAGCCACCCTGGGCGTCTTTGCAGCCACAGT +
Preference number: 5 (lower is better)
Translates to: PRRHSSGCSPWRSRS*LPGQSHPGRLCSHS
Trigger: ACTGTGGCTGCAAAGACGCCCAGGGTGGCTTTGTCCCGGCAGGCAAGACCTGGATCTCCAGGGGCTGCACCCAGAGCTGTGCCTGCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp GACAGAAGCAGCCCTCCTTGCAGGTGGAGGGAACTTCAGGGCTGGTaGCCCCACAGAGGCCCTCTGGGTCCGAGCAGGAAGGGAGACAGG +
Preference number: 5 (lower is better)
Translates to: DRSSPPCRWRELQGW*PHRGPLGPSRKGDR
Trigger: CCTGTCTCCCTTCCTGCTCGGACCCAGAGGGCCTCTGTGGGGGCACCAGCCCTGAAGTTCCCTCCACCTGCAAGGAGGGCTGCTTCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp GCCCCCACAGTGGCCTTCTGGGTCCGAGCAGGAAGGCTGACAGGGTaGAAGGCAGTTGGTGAAGCTGCTGTGGGCGGGGCACTGCAGAGT +
Preference number: 5 (lower is better)
Translates to: APTVAFWVRAGRLTG*KAVGEAAVGGALQS
Trigger: ACTCTGCAGTGCCCCGCCCACAGCAGCTTCACCAACTGCCTTCCACCCTGTCAGCCTTCCTGCTCGGACCCAGAAGGCCACTGTGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp GCAGGCGGAGGGGGCTTTGGTGGTGGAGCCCCCACAGTGGCCTTCTaGGTCCGAGCAGGAAGGCTGACAGGGTGGAAGGCAGTTGGTGAA +
Preference number: 5 (lower is better)
Translates to: AGGGGFGGGAPTVAF*VRAGRLTGWKAVGE
Trigger: TTCACCAACTGCCTTCCACCCTGTCAGCCTTCCTGCTCGGACCCAGAAGGCCACTGTGGGGGCTCCACCACCAAAGCCCCCTCCGCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp GCCCTCACAGAGGCCCTCGGGGTCCAAGCACGAGGGTGGACAGGATaGAAGGCAGTTGGTGTAGTGGCTATGGGCCGGGCACTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: ALTEALGVQARGWTG*KAVGVVAMGRALQR
Trigger: CCTCTGCAGTGCCCGGCCCATAGCCACTACACCAACTGCCTTCCATCCTGTCCACCCTCGTGCTTGGACCCCGAGGGCCTCTGTGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp AGGGCTGGTGCCCTCACAGAGGCCCTCGGGGTCCAAGCACGAGGGTaGACAGGATGGAAGGCAGTTGGTGTAGTGGCTATGGGCCGGGCA +
Preference number: 5 (lower is better)
Translates to: RAGALTEALGVQARG*TGWKAVGVVAMGRA
Trigger: TGCCCGGCCCATAGCCACTACACCAACTGCCTTCCATCCTGTCCACCCTCGTGCTTGGACCCCGAGGGCCTCTGTGAGGGCACCAGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp TCAGGTTGGCAGATGCAGCCCTCCCTGCAGGTGGCGGGGACTTTGTaGCCAGAGCCCTCACAGCGGCTGTCTGGATCCAAGCAGGAAGGT +
Preference number: 5 (lower is better)
Translates to: SGWQMQPSLQVAGTL*PEPSQRLSGSKQEG
Trigger: ACCTTCCTGCTTGGATCCAGACAGCCGCTGTGAGGGCTCTGGCCACAAAGTCCCCGCCACCTGCAGGGAGGGCTGCATCTGCCAACCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp GGCCCTCGGGGTCCAAGCACGAGGGTGGACAGGATGGAAGGCAGTTaGTGTAGTGGCTATGGGCCGGGCACTGCAGAGGGATATTGGTGC +
Preference number: 5 (lower is better)
Translates to: GPRGPSTRVDRMEGS*CSGYGPGTAEGYWC
Trigger: GCACCAATATCCCTCTGCAGTGCCCGGCCCATAGCCACTACACCAACTGCCTTCCATCCTGTCCACCCTCGTGCTTGGACCCCGAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp ATTGACAGAAGCAGCCCTCCTTGCAGGTGGAGGGAACTTCAGGGCTaGTGCCCCCACAGAGGCCCTCTGGGTCCGAGCAGGAAGGGAGAC +
Preference number: 5 (lower is better)
Translates to: IDRSSPPCRWRELQG*CPHRGPLGPSRKGD
Trigger: GTCTCCCTTCCTGCTCGGACCCAGAGGGCCTCTGTGGGGGCACCAGCCCTGAAGTTCCCTCCACCTGCAAGGAGGGCTGCTTCTGTCAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp GGCGCAAACACACGTGGTTGGCCTTGCAGGCCGTTGGGCTGCAGGTaGTGTTGCTGTGGGCTGAGCATGTGCAGAGGGTGGTGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: GANTRGWPCRPLGCR*CCCGLSMCRGWCRS
Trigger: AGACCTGCACCACCCTCTGCACATGCTCAGCCCACAGCAACATCACCTGCAGCCCAACGGCCTGCAAGGCCAACCACGTGTGTTTGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp GCAGGCGGAGGGGGCTTTGGTGGTGGAGCCCTCACAGTGGCCTTCTaGGTCCAAGCAGGAAGGCTGACAGGGTGGAAGGCAGTTGGTGAA +
Preference number: 5 (lower is better)
Translates to: AGGGGFGGGALTVAF*VQAGRLTGWKAVGE
Trigger: TTCACCAACTGCCTTCCACCCTGTCAGCCTTCCTGCTTGGACTCAGAAGGCCACTGTGAGGGCTCCACCACCAAAGCCCCCTCCGCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp GACGCAAAGGGGGCCTTGCTCCCATATGTCAGGGCTACGCAGGCGTaGCACTCCGCCCTGAGGGAAGGTCTTGGGATCCATGTGCAGGTA +
Preference number: 5 (lower is better)
Translates to: DAKGALLPYVRATQA*HSALREGLGIHVQV
Trigger: TACCTGCACATGGATCCCAAGACCTTCCCTCAGGGCGGAGTGGCACGCCTGCGTAGCCCTGACATATGGGAGCAAGGCCCCCTTTGCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp TGTCCCTATCGAGCACAAAGCCAGGGTTGCAGAGGCAGCCTTCCCTaGAAGTGGAGGGGACTCTGGGGCCAGAGGCTTCACAGTGGCCCT +
Preference number: 5 (lower is better)
Translates to: CPYRAQSQGCRGSLP*KWRGLWGQRLHSGP
Trigger: AGGGCCACTGTGAAGCCTCTGGCCCCAGAGTCCCCTCCACTTGCAGGGAAGGCTGCCTCTGCAACCCTGGCTTTGTGCTCGATAGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp CCTCCTTGCAGGTGGAAGGGACTTTGGGGCTGGTCTGCTCACAGCTaGCATCCAGGTTGGCACAGGAAGGTGGACAGGAGGGAAGGCAGC +
Preference number: 5 (lower is better)
Translates to: PPCRWKGLWGWSAHS*HPGWHRKVDRREGS
Trigger: GCTGCCTTCCCTCCTGTCCACCTTCCTGTGCCAACCTGGATGGCAGCTGTGAGCAGACCAGCCCCAAAGTCCCTTCCACCTGCAAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp CAGAGGCAGCCCTCCTTGCAGGTGGAAGGGACTTTGGGGCTGGTCTaGTCACAGCTGCCATCCAGGTTGGCACAGGAAGGTGGACAGGAG +
Preference number: 5 (lower is better)
Translates to: QRQPSLQVEGTLGLV*SQLPSRLAQEGGQE
Trigger: CTCCTGTCCACCTTCCTGTGCCAACCTGGATGGCAGCTGTGAGCAGACCAGCCCCAAAGTCCCTTCCACCTGCAAGGAGGGCTGCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp GGGGTTCCCTCCAGGGCTTCACAGGATAGCCGGCATCCTGGCAGGTaGCCGTCATGGCTGACATGTGAGCACAGAGCTTCTGCTGGAGAC +
Preference number: 5 (lower is better)
Translates to: GVPSRASQDSRHPGR*PSWLTCEHRASAGD
Trigger: GTCTCCAGCAGAAGCTCTGTGCTCACATGTCAGCCATGACGGCCACCTGCCAGGATGCCGGCTATCCTGTGAAGCCCTGGAGGGAACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CAGCCTGGGGAGGTCCAGGTCTTGCCTGCCGGGATGAGAGCACCCTaGGCGTCTTTGCAGTCACACTCAGCCCTGAGCACACACTTGTCA +
Preference number: 5 (lower is better)
Translates to: QPGEVQVLPAGMRAP*ASLQSHSALSTHLS
Trigger: TGACAAGTGTGTGCTCAGGGCTGAGTGTGACTGCAAAGACGCCCAGGGTGCTCTCATCCCGGCAGGCAAGACCTGGACCTCCCCAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp TACTCAGCACATAGTCAGGTTCACAGACACAGCCCTCCTCGCAGGTaGAGGGGGCTTCGGGGCTGGTGCCCTCACAGTGGCCATCAGGGT +
Preference number: 5 (lower is better)
Translates to: YSAHSQVHRHSPPRR*RGLRGWCPHSGHQG
Trigger: ACCCTGATGGCCACTGTGAGGGCACCAGCCCCGAAGCCCCCTCCACCTGCGAGGAGGGCTGTGTCTGTGAACCTGACTATGTGCTGAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp AGCCTTCCACGCAGGGGCCTTCACAGACCTTGGGGGTCACAAATTTaGCACAGGACGCCGGGCAGGGTGTCATGCAGCGCTGGTACACAG +
Preference number: 5 (lower is better)
Translates to: SLPRRGLHRPWGSQI*HRTPGRVSCSAGTQ
Trigger: CTGTGTACCAGCGCTGCATGACACCCTGCCCGGCGTCCTGTGCCAAATTTGTGACCCCCAAGGTCTGTGAAGGCCCCTGCGTGGAAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp CCAACAGGTGATAGGAGCCGTCCTGGTCACTGCAGCCACACTGTCTaGGGGGCACACAGGTGGTTCCACTCAGGATGTGGCCACTCTGGC +
Preference number: 5 (lower is better)
Translates to: PTGDRSRPGHCSHTV*GAHRWFHSGCGHSG
Trigger: GCCAGAGTGGCCACATCCTGAGTGGAACCACCTGTGTGCCCCTCAGACAGTGTGGCTGCAGTGACCAGGACGGCTCCTATCACCTGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp TGCAAAGACATCCCTCCCTGCAGCTGGAGGGGACGCTTGGGCTGGTaGCCTCACAGCGGTTGGAACAAGAAGGCACACAGGAGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: CKDIPPCSWRGRLGW*PHSGWNKKAHRREG
Trigger: GCCTTCCCTCCTGTGTGCCTTCTTGTTCCAACCGCTGTGAGGTCACCAGCCCAAGCGTCCCCTCCAGCTGCAGGGAGGGATGTCTTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp TGGCAGATGAAGGTGGCCCCCTGCTCCTCACACCGGCCATCATTGTaGCAGGGGTTCTGCAGACAAGGGCTGTCCTGGAAGCAGCCTCGA +
Preference number: 5 (lower is better)
Translates to: WQMKVAPCSSHRPSL*QGFCRQGLSWKQPR
Trigger: TCGAGGCTGCTTCCAGGACAGCCCTTGTCTGCAGAACCCCTGTCACAATGATGGCCGGTGTGAGGAGCAGGGGGCCACCTTCATCTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp GGCTGGTGCTCTCACAGCGGTCATTCACGTTGGAGCAGGATGGGATaGAGGAGGGTAGGCAGTAGGTGTGATGGCTGTGGGCTGGGCACT +
Preference number: 5 (lower is better)
Translates to: GWCSHSGHSRWSRMG*RRVGSRCDGCGLGT
Trigger: AGTGCCCAGCCCACAGCCATCACACCTACTGCCTACCCTCCTGCATCCCATCCTGCTCCAACGTGAATGACCGCTGTGAGAGCACCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp GGTGGCTGGGCAGGAGTTGGCACATGGGTTGTAGCTGCTCCTAGGTaGGCACCTCATAGGGCAGAAGGTGCTGTTGCGCCAGGTAGTCAC +
Preference number: 5 (lower is better)
Translates to: GGWAGVGTWVVAAPR*APHRAEGAVAPGSH
Trigger: GTGACTACCTGGCGCAACAGCACCTTCTGCCCTATGAGGTGCCCACCTAGGAGCAGCTACAACCCATGTGCCAACTCCTGCCCAGCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp GATGTGGCCACTCTGGCATTCACAGCCCTCTACACAGGGCAGCGTTaGACAGTCTCTTGGGGTGCTCAGGGTAAGGCAGGTGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: DVATLAFTALYTGQR*TVSWGAQGKAGGWA
Trigger: TGCCCAGCCACCTGCCTTACCCTGAGCACCCCAAGAGACTGTCCAACGCTGCCCTGTGTAGAGGGCTGTGAATGCCAGAGTGGCCACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp GTTGACAGAGGCAGCCCTCCTTGCAGGTGGAAGGGACTTTGGGGCTaGTCTGCTCACAGCTGCCATCCAGGTTGGCACAGGAAGGTGGAC +
Preference number: 5 (lower is better)
Translates to: VDRGSPPCRWKGLWG*SAHSCHPGWHRKVD
Trigger: GTCCACCTTCCTGTGCCAACCTGGATGGCAGCTGTGAGCAGACCAGCCCCAAAGTCCCTTCCACCTGCAAGGAGGGCTGCCTCTGTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp AGCCAGGTTGACAGAGGCAGCCCTCCTTGCAGGTGGAAGGGACTTTaGGGCTGGTCTGCTCACAGCTGCCATCCAGGTTGGCACAGGAAG +
Preference number: 5 (lower is better)
Translates to: SQVDRGSPPCRWKGL*GWSAHSCHPGWHRK
Trigger: CTTCCTGTGCCAACCTGGATGGCAGCTGTGAGCAGACCAGCCCCAAAGTCCCTTCCACCTGCAAGGAGGGCTGCCTCTGTCAACCTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CACAGGACGCCGGGCAGGGTGTCATGCAGCGCTGGTACACAGTATTaGCAGGACATGTCATGGCACAGTGTGTGTGGTCCCGCCAACCAG +
Preference number: 5 (lower is better)
Translates to: HRTPGRVSCSAGTQY*QDMSWHSVCGPANQ
Trigger: CTGGTTGGCGGGACCACACACACTGTGCCATGACATGTCCTGCCAATACTGTGTACCAGCGCTGCATGACACCCTGCCCGGCGTCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CAGCAGTACCCCCAGGGGTACCCACTCACCGGGATGAGAGCACCCTaGGCGTCTTTGCAGTCACACTCAGCCCTGAGCACACACTTGTCA +
Preference number: 5 (lower is better)
Translates to: QQYPQGYPLTGMRAP*ASLQSHSALSTHLS
Trigger: TGACAAGTGTGTGCTCAGGGCTGAGTGTGACTGCAAAGACGCCCAGGGTGCTCTCATCCCGGTGAGTGGGTACCCCTGGGGGTACTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
CDS GCA 90 bp CATACAGCGCTGCTCAAAGGGCTCTGGGGCTATGATCTGGTGACATaGAGCAAAGGGTCCCTGGGGGTCCACAAGCACCCTACAGGCCTG +
Preference number: 5 (lower is better)
Translates to: HTALLKGLWGYDLVT*SKGSLGVHKHPTGL
Trigger: CAGGCCTGTAGGGTGCTTGTGGACCCCCAGGGACCCTTTGCTGCATGTCACCAGATCATAGCCCCAGAGCCCTTTGAGCAGCGCTGTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp GGGTTAGGTTGTCTCCGTTGGTCTCACACTGGCCATACACACAACTaGAGAAGCTGGCCTGCGGGGGCACCGCCTCGTGGCAATTGGAGA +
Preference number: 5 (lower is better)
Translates to: GLGCLRWSHTGHTHN*RSWPAGAPPRGNWR
Trigger: TCTCCAATTGCCACGAGGCGGTGCCCCCGCAGGCCAGCTTCTCCAGTTGTGTGTATGGCCAGTGTGAGACCAACGGAGACAACCTAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp ACGTGGTTGGCCTTGCAGGCCGTTGGGCTGCAGGTGATGTTGCTGTaGGCTGAGCATGTGCAGAGGGTGGTGCAGGTCTTCTCTGTGTAC +
Preference number: 5 (lower is better)
Translates to: TWLALQAVGLQVMLL*AEHVQRVVQVFSVY
Trigger: GTACACAGAGAAGACCTGCACCACCCTCTGCACATGCTCAGCCCACAGCAACATCACCTGCAGCCCAACGGCCTGCAAGGCCAACCACGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp GCAGGTGGCGGGGACTTTGTGGCCAGAGCCCTCACAGCGGCTGTCTaGATCCAAGCAGGAAGGTGGACAGGAGGGAAGGCAGTTTGTATA +
Preference number: 5 (lower is better)
Translates to: AGGGDFVARALTAAV*IQAGRWTGGKAVCI
Trigger: TATACAAACTGCCTTCCCTCCTGTCCACCTTCCTGCTTGGATCCAGACAGCCGCTGTGAGGGCTCTGGCCACAAAGTCCCCGCCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp TACTCAGCACATAGTCAGGTTCACAAACGCAGCCCTCCTTGCAGGTaGAGGGGGCTTCGGGGCTGGTGCCTCTACAGAGGCCATCTGGGT +
Preference number: 5 (lower is better)
Translates to: YSAHSQVHKRSPPCR*RGLRGWCLYRGHLG
Trigger: ACCCAGATGGCCTCTGTAGAGGCACCAGCCCCGAAGCCCCCTCCACCTGCAAGGAGGGCTGCGTTTGTGAACCTGACTATGTGCTGAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp GCCATGGTTGCAAAGACATCCCTCCCTGCAGCTGGAGGGGACGCTTaGGCTGGTGACCTCACAGCGGTTGGAACAAGAAGGCACACAGGA +
Preference number: 5 (lower is better)
Translates to: AMVAKTSLPAAGGDA*AGDLTAVGTRRHTG
Trigger: TCCTGTGTGCCTTCTTGTTCCAACCGCTGTGAGGTCACCAGCCCAAGCGTCCCCTCCAGCTGCAGGGAGGGATGTCTTTGCAACCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp AGCCAGGTTGACAGAGGCAGCCCTCCTTGCAGGGAGACGGGACTTTaGGACTGGTCCCCTCACAGTGGCCATCCAGATCAGTACAGGAAC +
Preference number: 5 (lower is better)
Translates to: SQVDRGSPPCRETGL*DWSPHSGHPDQYRN
Trigger: GTTCCTGTACTGATCTGGATGGCCACTGTGAGGGGACCAGTCCCAAAGTCCCGTCTCCCTGCAAGGAGGGCTGCCTCTGTCAACCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp TGGTACTGGTCACTCTTCAGCTGGCATACCGTATGCGTCCCACACTaGGAGATCTGGCACTCCATCAGGCTACCCGGCAAGCAGCGGCAC +
Preference number: 5 (lower is better)
Translates to: WYWSLFSWHTVCVPH*EIWHSIRLPGKQRH
Trigger: GTGCCGCTGCTTGCCGGGTAGCCTGATGGAGTGCCAGATCTCTCAGTGTGGGACGCATACGGTATGCCAGCTGAAGAGTGACCAGTACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp GGTGCAGTTGCTGTTGCCGTCCTCCAGGTCCTGGCAGTAAGCCTCTaGGGGACACTTGAAATTCTGGCACTGGATGGCCCCTCCCATGCA +
Preference number: 5 (lower is better)
Translates to: GAVAVAVLQVLAVSL*GTLEILALDGPSHA
Trigger: TGCATGGGAGGGGCCATCCAGTGCCAGAATTTCAAGTGTCCCTCAGAGGCTTACTGCCAGGACCTGGAGGACGGCAACAGCAACTGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp GGGCTGGATCCCTCACAGTGGACATCCGTATTAGAGCAGGAGGGCTaGCAAGAAGGCAGGCAGCTGGTGAAGTTGCTGTTGGCTGGGCAC +
Preference number: 5 (lower is better)
Translates to: GLDPSQWTSVLEQEG*QEGRQLVKLLLAGH
Trigger: GTGCCCAGCCAACAGCAACTTCACCAGCTGCCTGCCTTCTTGTCAGCCCTCCTGCTCTAATACGGATGTCCACTGTGAGGGATCCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp AGCTCTGGGTACAGCCTGGAGAGGTCCAGGTCTTGCCTGACGGGATaGGAGCACCCTGTGCATCTTTGCAGCCACACTCAACTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: SSGYSLERSRSCLTG*EHPVHLCSHTQLWA
Trigger: TGCCCAGAGTTGAGTGTGGCTGCAAAGATGCACAGGGTGCTCTCATCCCGTCAGGCAAGACCTGGACCTCTCCAGGCTGTACCCAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp GCAAAGCCCCATCGAACGTCAGGTAGTGGGGGTCACCAGACACCATaGAGGTGGCTGCTCCTTGGGCATGACAGCCTAAGACGCCATTCT +
Preference number: 5 (lower is better)
Translates to: AKPHRTSGSGGHQTP*RWLLLGHDSLRRHS
Trigger: AGAATGGCGTCTTAGGCTGTCATGCCCAAGGAGCAGCCACCTGCATGGTGTCTGGTGACCCCCACTACCTGACGTTCGATGGGGCTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp TCCCCAAGGGACACTGGAAATTCTGGCACTGAACAGCCCCTCCTGTaGAGGCACAGCTCTGGGTACAGTCCTTGGAGGTCCAGGTCTTGC +
Preference number: 5 (lower is better)
Translates to: SPRDTGNSGTEQPLL*RHSSGYSPWRSRSC
Trigger: GCAAGACCTGGACCTCCAAGGACTGTACCCAGAGCTGTGCCTGCACAGGAGGGGCTGTTCAGTGCCAGAATTTCCAGTGTCCCTTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp GGCTGTGGGCGGGACACTGCAGAGGGATTTTGGCACAGGTTCTGCTaGTATCGTTGCTCTCCTTGCAGTAAGTCCCTGGGGGACACTGGA +
Preference number: 5 (lower is better)
Translates to: GCGRDTAEGFWHRFC*YRCSPCSKSLGDTG
Trigger: TCCAGTGTCCCCCAGGGACTTACTGCAAGGAGAGCAACGATAGCAGCAGAACCTGTGCCAAAATCCCTCTGCAGTGTCCCGCCCACAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp AGGCAGGAGGGAAGGCAGCTGGTGTACTGGGTGTGGGCCGGGCACTaGAGAGTGATTTTGGTGCAAGTACTGCTGCCTTCACTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: RQEGRQLVYWVWAGH*RVILVQVLLPSLLS
Trigger: GGACAACAGTGAAGGCAGCAGTACTTGCACCAAAATCACTCTCCAGTGCCCGGCCCACACCCAGTACACCAGCTGCCTTCCCTCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp GTTGACAGAGGCAGCCCTCCTTGCAGGGAGACGGGACTTTGGGACTaGTCCCCTCACAGTGGCCATCCAGATCAGTACAGGAACGTGAAC +
Preference number: 5 (lower is better)
Translates to: VDRGSPPCRETGLWD*SPHSGHPDQYRNVN
Trigger: GTTCACGTTCCTGTACTGATCTGGATGGCCACTGTGAGGGGACCAGTCCCAAAGTCCCGTCTCCCTGCAAGGAGGGCTGCCTCTGTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CATGCAGCAAAGGGTCCCTGGGGGTCCACAAGCACCCTACAGGCCTaGGTGCTGCTGATAAGCGCAGTCTGCTCTTGGCTGCATTCTGAT +
Preference number: 5 (lower is better)
Translates to: HAAKGPWGSTSTLQA*VLLISAVCSWLHSD
Trigger: ATCAGAATGCAGCCAAGAGCAGACTGCGCTTATCAGCAGCACCCAGGCCTGTAGGGTGCTTGTGGACCCCCAGGGACCCTTTGCTGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp TCCAACATACAGCGCTGCTCAAAGGGCTCTGGGGCTATGATCTGGTaGCATGCAGCAAAGGGTCCCTGGGGGTCCACAAGCACCCTACAG +
Preference number: 5 (lower is better)
Translates to: SNIQRCSKGSGAMIW*HAAKGPWGSTSTLQ
Trigger: CTGTAGGGTGCTTGTGGACCCCCAGGGACCCTTTGCTGCATGTCACCAGATCATAGCCCCAGAGCCCTTTGAGCAGCGCTGTATGTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp TGTGATTATGCACCACATAGCCAGGTTGACAGAGGCAGCCCTCCTTaGAGGGAGACGGGACTTTGGGACTGGTCCCCTCACAGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: CDYAPHSQVDRGSPP*RETGLWDWSPHSGH
Trigger: ATGGCCACTGTGAGGGGACCAGTCCCAAAGTCCCGTCTCCCTGCAAGGAGGGCTGCCTCTGTCAACCTGGCTATGTGGTGCATAATCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp CCTTGGGGGTCACAAATTTGGCACAGGACGCCGGGCAGGGTGTCATaGAGCGCTGGTACACAGTATTGGCAGGACATGTCATGGCACAGT +
Preference number: 5 (lower is better)
Translates to: PWGSQIWHRTPGRVS*SAGTQYWQDMSWHS
Trigger: ACTGTGCCATGACATGTCCTGCCAATACTGTGTACCAGCGCTGCATGACACCCTGCCCGGCGTCCTGTGCCAAATTTGTGACCCCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp CCCAGCTCTGCAGCCATAGGGCTCACACAGCAGGATCCCCTGGCTTaGACAGGTACAGTGCTGGGAGCAGTCGTTAGTTACAAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: PSSAAIGLTQQDPLA*TGTVLGAVVSYKAV
Trigger: GACAGCTTTGTAACTAACGACTGCTCCCAGCACTGTACCTGTGCAAGCCAGGGGATCCTGCTGTGTGAGCCCTATGGCTGCAGAGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp ATGCATAGGCCTGCAGGGAGTGGCAGAGGGTTAGGTTGTCTCCGTTaGTCTCACACTGGCCATACACACAACTGGAGAAGCTGGCCTGCG +
Preference number: 5 (lower is better)
Translates to: MHRPAGSGRGLGCLR*SHTGHTHNWRSWPA
Trigger: CGCAGGCCAGCTTCTCCAGTTGTGTGTATGGCCAGTGTGAGACCAACGGAGACAACCTAACCCTCTGCCACTCCCTGCAGGCCTATGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp GTGGCCAGAGCCCTCACAGCGGCTGTCTGGATCCAAGCAGGAAGGTaGACAGGAGGGAAGGCAGTTTGTATAGTGACTGTGAGCTGGACA +
Preference number: 5 (lower is better)
Translates to: VARALTAAVWIQAGR*TGGKAVCIVTVSWT
Trigger: TGTCCAGCTCACAGTCACTATACAAACTGCCTTCCCTCCTGTCCACCTTCCTGCTTGGATCCAGACAGCCGCTGTGAGGGCTCTGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CTGATCCCTCCAGCCATGAGCACACCGTCCCCCATGGCTCCCTTATaGATTTTGGTGCAGTTGCTGCTGCCGTCACCACTGTCTTTGCAG +
Preference number: 5 (lower is better)
Translates to: LIPPAMSTPSPMAPL*ILVQLLLPSPLSLQ
Trigger: CTGCAAAGACAGTGGTGACGGCAGCAGCAACTGCACCAAAATCCATAAGGGAGCCATGGGGGACGGTGTGCTCATGGCTGGAGGGATCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CCAGCCAGTGCACATATCCAACATACAGCGCTGCTCAAAGGGCTCTaGGGCTATGATCTGGTGACATGCAGCAAAGGGTCCCTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: PASAHIQHTALLKGL*GYDLVTCSKGSLGV
Trigger: GACCCCCAGGGACCCTTTGCTGCATGTCACCAGATCATAGCCCCAGAGCCCTTTGAGCAGCGCTGTATGTTGGATATGTGCACTGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CGCTGGTACACAGTATTGGCAGGACATGTCATGGCACAGTGTGTGTaGTCCCGCCAACCAGTCATGTTGGCGCCTGCCTCCTGGCAAATG +
Preference number: 5 (lower is better)
Translates to: RWYTVLAGHVMAQCV*SRQPVMLAPASWQM
Trigger: CATTTGCCAGGAGGCAGGCGCCAACATGACTGGTTGGCGGGACCACACACACTGTGCCATGACATGTCCTGCCAATACTGTGTACCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp CCTGGCAGTAAGTCCCCGAGGGACACTGGAAATTCTGGCATCGAATaGCCCCTTCCATGCAGTCACAGCTCTGGGAACAGCCTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: PGSKSPRDTGNSGIE*PLPCSHSSGNSLWK
Trigger: CTTCCAGAGGCTGTTCCCAGAGCTGTGACTGCATGGAAGGGGTCATTCGATGCCAGAATTTCCAGTGTCCCTCGGGGACTTACTGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp TGTTGCCGTCCTCCAGGTCCTGGCAGTAAGCCTCTGAGGGACACTTaGAATTCTGGCACTGGATGGCCCCTCCCATGCAAGAACAGCTCT +
Preference number: 5 (lower is better)
Translates to: CCRPPGPGSKPLRDT*NSGTGWPLPCKNSS
Trigger: AGAGCTGTTCTTGCATGGGAGGGGCCATCCAGTGCCAGAATTTCAAGTGTCCCTCAGAGGCTTACTGCCAGGACCTGGAGGACGGCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp ACTGGCAGTGGGACCCTGATGGGCAGACAAAATTCTGGCACTGGATaGCTCCATCCGTGCAGGCACAGCTCTGGGTACAGTCACTGGAGA +
Preference number: 5 (lower is better)
Translates to: TGSGTLMGRQNSGTG*LHPCRHSSGYSHWR
Trigger: TCTCCAGTGACTGTACCCAGAGCTGTGCCTGCACGGATGGAGTCATCCAGTGCCAGAATTTTGTCTGCCCATCAGGGTCCCACTGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp GCGGAGGGATTCTGGCACAGTTACTGCTGCCATCTTCATTGTCCTTaGAGTATGCCCCAGGGGGACACTGGAAACTCAGGCACTGGATGC +
Preference number: 5 (lower is better)
Translates to: AEGFWHSYCCHLHCP*SMPQGDTGNSGTGC
Trigger: GCATCCAGTGCCTGAGTTTCCAGTGTCCCCCTGGGGCATACTGCAAGGACAATGAAGATGGCAGCAGTAACTGTGCCAGAATCCCTCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp CGGGACACTGCAGAGGGATTTTGGCACAGGTTCTGCTGCTATCGTTaGTCTCCTTGCAGTAAGTCCCTGGGGGACACTGGAAATCCCTGC +
Preference number: 5 (lower is better)
Translates to: RDTAEGFWHRFCCYR*SPCSKSLGDTGNPC
Trigger: GCAGGGATTTCCAGTGTCCCCCAGGGACTTACTGCAAGGAGAGCAACGATAGCAGCAGAACCTGTGCCAAAATCCCTCTGCAGTGTCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp GCAGGTACACTTTTGGGCACAGCCTCTGGTAAGCCAGGTCTTGTTTaGCGGGATGAGATCACCCTGGGCGTCTTTGCAGCCACACTGAGT +
Preference number: 5 (lower is better)
Translates to: AGTLLGTASGKPGLV*RDEITLGVFAATLS
Trigger: ACTCAGTGTGGCTGCAAAGACGCCCAGGGTGATCTCATCCCGGCAAACAAGACCTGGCTTACCAGAGGCTGTGCCCAAAAGTGTACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp TGCAGGGATGGTGGTCTCTTCAGGAGGGGTAGTGGTCACTTCTGTTaGGGTGGTGGTCTCCTCAGGAGGAATGCTGGCAGGAAGAACAGT +
Preference number: 5 (lower is better)
Translates to: CRDGGLFRRGSGHFC*GGGLLRRNAGRKNS
Trigger: ACTGTTCTTCCTGCCAGCATTCCTCCTGAGGAGACCACCACCCCAACAGAAGTGACCACTACCCCTCCTGAAGAGACCACCATCCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp TGCAGGGATGGTGGTCTCTTCAGGAGGGGTAGTGGTCACTTCTGTTaGGGTGGTGGTCTCCTCAGAAGGGATGCTGACAGGAGGAACAGT +
Preference number: 5 (lower is better)
Translates to: CRDGGLFRRGSGHFC*GGGLLRRDADRRNS
Trigger: ACTGTTCCTCCTGTCAGCATCCCTTCTGAGGAGACCACCACCCCAACAGAAGTGACCACTACCCCTCCTGAAGAGACCACCATCCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CTGCTGCCATCTTCATTGTCCTTGCAGTATGCCCCAGGGGGACACTaGAAACTCAGGCACTGGATGCTTCCTCCTGTGCAGACACAGCTC +
Preference number: 5 (lower is better)
Translates to: LLPSSLSLQYAPGGH*KLRHWMLPPVQTQL
Trigger: GAGCTGTGTCTGCACAGGAGGAAGCATCCAGTGCCTGAGTTTCCAGTGTCCCCCTGGGGCATACTGCAAGGACAATGAAGATGGCAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp GGCACAGGTTCTGCTGCTATCGTTGCTCTCCTTGCAGTAAGTCCCTaGGGGACACTGGAAATCCCTGCACTGGATGATGCCTCCCATGCA +
Preference number: 5 (lower is better)
Translates to: GTGSAAIVALLAVSP*GTLEIPALDDASHA
Trigger: TGCATGGGAGGCATCATCCAGTGCAGGGATTTCCAGTGTCCCCCAGGGACTTACTGCAAGGAGAGCAACGATAGCAGCAGAACCTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CATCCCCTGGAGACCCATGTCTTGCTTTCCGGGATGAGAACGCCATaGGCGTCTTTGCAGCCACACTCACTGCTAGGCACACACTTGTCA +
Preference number: 5 (lower is better)
Translates to: HPLETHVLLSGMRTP*ASLQPHSLLGTHLS
Trigger: TGACAAGTGTGTGCCTAGCAGTGAGTGTGGCTGCAAAGACGCCCATGGCGTTCTCATCCCGGAAAGCAAGACATGGGTCTCCAGGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp TCCTCGTTGTACTGGCAGTGGGACCCTGATGGGCAGACAAAATTCTaGCACTGGATGACTCCATCCGTGCAGGCACAGCTCTGGGTACAG +
Preference number: 5 (lower is better)
Translates to: SSLYWQWDPDGQTKF*HWMTPSVQAQLWVQ
Trigger: CTGTACCCAGAGCTGTGCCTGCACGGATGGAGTCATCCAGTGCCAGAATTTTGTCTGCCCATCAGGGTCCCACTGCCAGTACAACGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS-3UTR CAA 90 bp AGCCAGATTGACAGATGCAGCCTTCCTTGCAAGAGGAGGGGACTTTGGGACTGGCACACGCAGCCCTCCTaGCAGGTGGAGGGAACTTTA +
Preference number: 5 (lower is better)
Translates to: SQIDRCSLPCKRRGLWDWHTQPS*QVEGTL
Trigger: TAAAGTTCCCTCCACCTGCAAGGAGGGCTGCGTGTG...CCAGTCCCAAAGTCCCCTCCTCTTGCAAGGAAGGCTGCATCTGTCAATCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
CDS TCA 90 bp CCAGCTCAGCCTCAGCTCCTCCTCATCGTGTGTCATCATGCCATCTaGCTTCAGGTTGTCGTTGCTGCTGTCCCCGTCATAGTTCCCACA +
Preference number: 5 (lower is better)
Translates to: PAQPQLLLIVCHHAI*LQVVVAAVPVIVPT
Trigger: TGTGGGAACTATGACGGGGACAGCAGCAACGACAACCTGAAGTCAGATGGCATGATGACACACGATGAGGAGGAGCTGAGGCTGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp GGCACAGCTACTGCTGTCATCCTCCATGTCCTTGCAGTAAGTCCCTaGGGAGCAGTGATATTTCTGGCACTGGATGGCCCCTCCCTTGCA +
Preference number: 5 (lower is better)
Translates to: GTATAVILHVLAVSP*GAVIFLALDGPSLA
Trigger: TGCAAGGGAGGGGCCATCCAGTGCCAGAAATATCACTGCTCCTCAGGGACTTACTGCAAGGACATGGAGGATGACAGCAGTAGCTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp TGCACATATCCAACATACAGCGCTGCTCAAAGGGCTCTGGGGCTATaGTCTGGTGACATGCAGCAAAGGGTCCCTGGGGGTCCACAAGCA +
Preference number: 5 (lower is better)
Translates to: CTYPTYSAAQRALGL*SGDMQQRVPGGPQA
Trigger: TGCTTGTGGACCCCCAGGGACCCTTTGCTGCATGTCACCAGATCATAGCCCCAGAGCCCTTTGAGCAGCGCTGTATGTTGGATATGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp TGCCATTATTCAAGAAGTAGCCAGGTTGACAGAGGCAGCCCTCCTTaGAGGTGGAAGGGACTTTGGGGCTGGTCTGCTCACAGCTGCCAT +
Preference number: 5 (lower is better)
Translates to: CHYSRSSQVDRGSPP*RWKGLWGWSAHSCH
Trigger: ATGGCAGCTGTGAGCAGACCAGCCCCAAAGTCCCTTCCACCTGCAAGGAGGGCTGCCTCTGTCAACCTGGCTACTTCTTGAATAATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp GCAGCTACAGCTCTTAGTACAGTCACTGGAGATCCAGGTCCTACCTaGGGGAATGAGGCCACCTTGGGTGTCCTTGCAGCCACACTGAAT +
Preference number: 5 (lower is better)
Translates to: AATALSTVTGDPGPT*GNEATLGVLAATLN
Trigger: ATTCAGTGTGGCTGCAAGGACACCCAAGGTGGCCTCATTCCCGCAGGTAGGACCTGGATCTCCAGTGACTGTACTAAGAGCTGTAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp TCCACAAGCACCCTACAGGCCTGGGTGCTGCTGATAAGCGCAGTCTaGTCTTGGCTGCATTCTGATTGGAGAAGGTCAGGCTCTTCGTCT +
Preference number: 5 (lower is better)
Translates to: STSTLQAWVLLISAV*SWLHSDWRRSGSSS
Trigger: AGACGAAGAGCCTGACCTTCTCCAATCAGAATGCAGCCAAGAGCAGACTGCGCTTATCAGCAGCACCCAGGCCTGTAGGGTGCTTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp TGCAGGGATGGTGGTCTCTTCAGGAGGGGTAGTGGTCACTTCTGTTaGGGTGGTGGTCTCCTCAGAAGGGATGCTGACAGGAGGAATAGT +
Preference number: 5 (lower is better)
Translates to: CRDGGLFRRGSGHFC*GGGLLRRDADRRNS
Trigger: ACTATTCCTCCTGTCAGCATCCCTTCTGAGGAGACCACCACCCCAACAGAAGTGACCACTACCCCTCCTGAAGAGACCACCATCCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp GCTCTCACAGGATGCTGGGCATGCACACAATTCAATGTGGGCATTTaGAGGGCAGCTCTCTGTGGTAGAAACACCTGTAGTCGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: ALTGCWACTQFNVGI*RAALCGRNTCSRGQ
Trigger: CTGGCCCCGACTACAGGTGTTTCTACCACAGAGAGCTGCCCTCCAAATGCCCACATTGAATTGTGTGCATGCCCAGCATCCTGTGAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CCAGGGTCACACTCGCAGCCTTCCACACACTTGTCTGAGCAGTGCTaGGTAGTAGATATAGGATGGCAGGTTTCCGGGCATGGTTTGGCA +
Preference number: 5 (lower is better)
Translates to: PGSHSQPSTHLSEQC*VVDIGWQVSGHGLA
Trigger: TGCCAAACCATGCCCGGAAACCTGCCATCCTATATCTACTACCCAGCACTGCTCAGACAAGTGTGTGGAAGGCTGCGAGTGTGACCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp GGAAGGTGGACAGGAGGGAAGGCAGTTTGTATAGTGACTGTGAGCTaGACACTCCAGAGGGCAGAAGCTGCTGTTCCTCCAGATAGGTGG +
Preference number: 5 (lower is better)
Translates to: GRWTGGKAVCIVTVS*TLQRAEAAVPPDRW
Trigger: CCACCTATCTGGAGGAACAGCAGCTTCTGCCCTCTGGAGTGTCCAGCTCACAGTCACTATACAAACTGCCTTCCCTCCTGTCCACCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp GAAGTCCAGCTCTTGCCTGCAGGGATGAAACCACCCTGGGTATGTTaGCAGCCACACTCAATTCTGAGCACACACTTGTCGTTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: EVQLLPAGMKPPWVC*QPHSILSTHLSLRS
Trigger: GCTGCGCAACGACAAGTGTGTGCTCAGAATTGAGTGTGGCTGCCAACATACCCAGGGTGGTTTCATCCCTGCAGGCAAGAGCTGGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CAGCCTCTGGAAGTCCAGCTCTTGCCTGCAGGGATGAAACCACCCTaGGTATGTTGGCAGCCACACTCAATTCTGAGCACACACTTGTCG +
Preference number: 5 (lower is better)
Translates to: QPLEVQLLPAGMKPP*VCWQPHSILSTHLS
Trigger: CGACAAGTGTGTGCTCAGAATTGAGTGTGGCTGCCAACATACCCAGGGTGGTTTCATCCCTGCAGGCAAGAGCTGGACTTCCAGAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CACTGTGTTCTGGGCACACATTTGTCCTCACTGAACACAAAGCCATaGTTGCAAAGACATCCCTCCCTGCAGCTGGAGGGGACGCTTGGG +
Preference number: 5 (lower is better)
Translates to: HCVLGTHLSSLNTKP*LQRHPSLQLEGTLG
Trigger: CCCAAGCGTCCCCTCCAGCTGCAGGGAGGGATGTCTTTGCAACCATGGCTTTGTGTTCAGTGAGGACAAATGTGTGCCCAGAACACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp GGCAGTTTGTGTAGTGGCTGTGGGCGGGACACTGCAGAGGGATTTTaGCACAGGTTCTGCTGCTATCGTTGCTCTCCTTGCAGTAAGTCC +
Preference number: 5 (lower is better)
Translates to: GSLCSGCGRDTAEGF*HRFCCYRCSPCSKS
Trigger: GGACTTACTGCAAGGAGAGCAACGATAGCAGCAGAACCTGTGCCAAAATCCCTCTGCAGTGTCCCGCCCACAGCCACTACACAAACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp ACAAAATTCTGGCACTGGATGACTCCATCCGTGCAGGCACAGCTCTaGGTACAGTCACTGGAGATCCAGGTGTTGCCTGCCGGGATGATG +
Preference number: 5 (lower is better)
Translates to: TKFWHWMTPSVQAQL*VQSLEIQVLPAGMM
Trigger: CATCATCCCGGCAGGCAACACCTGGATCTCCAGTGACTGTACCCAGAGCTGTGCCTGCACGGATGGAGTCATCCAGTGCCAGAATTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp AGCACCCTACAGGCCTGGGTGCTGCTGATAAGCGCAGTCTGCTCTTaGCTGCATTCTGATTGGAGAAGGTCAGGCTCTTCGTCTCTTTCC +
Preference number: 5 (lower is better)
Translates to: STLQAWVLLISAVCS*LHSDWRRSGSSSLS
Trigger: GGAAAGAGACGAAGAGCCTGACCTTCTCCAATCAGAATGCAGCCAAGAGCAGACTGCGCTTATCAGCAGCACCCAGGCCTGTAGGGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp TCTCTGTCTGCAGCAATACCCGACATGGTCCATGAGAGATCAAGATaGAGTTCAGAGCGACAACAAAGGCAGTGCTGGTGCCCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: SLSAAIPDMVHERSR*SSERQQRQCWCPGW
Trigger: CCACCCGGGGCACCAGCACTGCCTTTGTTGTCGCTCTGAACTTCATCTTGATCTCTCATGGACCATGTCGGGTATTGCTGCAGACAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp AGTGCAGTTACTGGTGTCATCCTTGATGTCCTTGCAGTAGGTCCCTaGGGGACACTGGAAGTCCCTGCAGTGGATGGTCCCTGTCACACA +
Preference number: 5 (lower is better)
Translates to: SAVTGVILDVLAVGP*GTLEVPAVDGPCHT
Trigger: TGTGTGACAGGGACCATCCACTGCAGGGACTTCCAGTGTCCCTCAGGGACCTACTGCAAGGACATCAAGGATGACACCAGTAACTGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp GGTGCAGTTACTGTTGCCGTCCTCGATGTCCTTGCAGTAAGTCTCTaGGGGACACTGAAATTTCTGGCACTGGATGGCCCCTCCCTTGCA +
Preference number: 5 (lower is better)
Translates to: GAVTVAVLDVLAVSL*GTLKFLALDGPSLA
Trigger: TGCAAGGGAGGGGCCATCCAGTGCCAGAAATTTCAGTGTCCCTCAGAGACTTACTGCAAGGACATCGAGGACGGCAACAGTAACTGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp TTACCTGCCGGTATGAGGGTACCCTGGGAGTCTTTGCAGCCACACTaGGTTCTGGGCACACACTTGTCCTTACTGAACACAAAGCCCGAG +
Preference number: 5 (lower is better)
Translates to: LPAGMRVPWESLQPH*VLGTHLSLLNTKPE
Trigger: CTCGGGCTTTGTGTTCAGTAAGGACAAGTGTGTGCCCAGAACTCAGTGTGGCTGCAAAGACTCCCAGGGTACCCTCATACCGGCAGGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp GGTCTCCTCAGAAGGGATGCTGACAGGAGGAATAGTGGTCACTTCTaGAGGGATGGTGGTCTCTTCAGGAGGGGTAGTGGTCACTTCTGT +
Preference number: 5 (lower is better)
Translates to: GLLRRDADRRNSGHF*RDGGLFRRGSGHFC
Trigger: ACAGAAGTGACCACTACCCCTCCTGAAGAGACCACCATCCCTGCAGAAGTGACCACTATTCCTCCTGTCAGCATCCCTTCTGAGGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp GCAAGAACAGCTCTGGGTGCAGCCCCTGTTGATCCAAGTCTTACCTaGCGGGATGAGAACACCCTGAGCATCTTTGCAGCCACACTCAAT +
Preference number: 5 (lower is better)
Translates to: ARTALGAAPVDPSLT*RDENTLSIFAATLN
Trigger: ATTGAGTGTGGCTGCAAAGATGCTCAGGGTGTTCTCATCCCGGCAGGTAAGACTTGGATCAACAGGGGCTGCACCCAGAGCTGTTCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp GCAGGTGCAGCTCTGAGTACAGCCTCTGTTGATCCAGGTCTTATCTaGAGGGATGAGGACACCCTGGGCATCTTTGCAGCCACACTCAAT +
Preference number: 5 (lower is better)
Translates to: AGAALSTASVDPGLI*RDEDTLGIFAATLN
Trigger: ATTGAGTGTGGCTGCAAAGATGCCCAGGGTGTCCTCATCCCTGCAGATAAGACCTGGATCAACAGAGGCTGTACTCAGAGCTGCACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp GATTCTGGCACAGTTACTGCTGCCATCTTCATTGTCCTTGCAGTATaGCCCAGGGGGACACTGGAAACTCAGGCACTGGATGCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: DSGTVTAAIFIVLAV*PRGTLETQALDASS
Trigger: GGAGGAAGCATCCAGTGCCTGAGTTTCCAGTGTCCCCCTGGGGCATACTGCAAGGACAATGAAGATGGCAGCAGTAACTGTGCCAGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp GGTCCAAGCAGGAAGGGAGACAGAAGGGAAGGCAGTCGGTGTAGTTaGTGTGGGTGGGGCACTGCAGAGTTATTTTGGCACAGTTACTGT +
Preference number: 5 (lower is better)
Translates to: GPSRKGDRREGSRCS*CGWGTAELFWHSYC
Trigger: ACAGTAACTGTGCCAAAATAACTCTGCAGTGCCCCACCCACAGCAACTACACCGACTGCCTTCCCTTCTGTCTCCCTTCCTGCTTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp AGATCCAGGTCTTGCCTGCCGGGACAAAGCCACCCTGGGCGTCTTTaGAGCCACAGTGAATTTGGAGCACACACTTGTGATTATGCACCA +
Preference number: 5 (lower is better)
Translates to: RSRSCLPGQSHPGRL*SHSEFGAHTCDYAP
Trigger: TGGTGCATAATCACAAGTGTGTGCTCCAAATTCACTGTGGCTGCAAAGACGCCCAGGGTGGCTTTGTCCCGGCAGGCAAGACCTGGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CTCCATGGGGAGCGTAGGAACAGTAGATTCAGAAGGGCCAGTAGGTaGAAGCAGAGGACTGGAAGGAATCTCTGTCTGCAGCAATACCCG +
Preference number: 5 (lower is better)
Translates to: LHGERRNSRFRRASR*KQRTGRNLCLQQYP
Trigger: CGGGTATTGCTGCAGACAGAGATTCCTTCCAGTCCTCTGCTTCCACCTACTGGCCCTTCTGAATCTACTGTTCCTACGCTCCCCATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp TTGTTGGCTGCACAGTCACTGCTGCCATCCTCGTTGTACTGGCAGTaGGACCCTGATGGGCAGACAAAATTCTGGCACTGGATGACTCCA +
Preference number: 5 (lower is better)
Translates to: LLAAQSLLPSSLYWQ*DPDGQTKFWHWMTP
Trigger: TGGAGTCATCCAGTGCCAGAATTTTGTCTGCCCATCAGGGTCCCACTGCCAGTACAACGAGGATGGCAGCAGTGACTGTGCAGCCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp TCCAGTTTGTTGGCTGCACAGTCACTGCTGCCATCCTCGTTGTACTaGCAGTGGGACCCTGATGGGCAGACAAAATTCTGGCACTGGATG +
Preference number: 5 (lower is better)
Translates to: SSLLAAQSLLPSSLY*QWDPDGQTKFWHWM
Trigger: CATCCAGTGCCAGAATTTTGTCTGCCCATCAGGGTCCCACTGCCAGTACAACGAGGATGGCAGCAGTGACTGTGCAGCCAACAAACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS-3UTR CAA 90 bp CAGGCACTTGTTGTTACTCAGCACGTAGCCAGATTGACAGATGCAGCCTTCCTTCAGCACGTAGCCAGATaGGCACACGCAGCCCTCCTT +
Preference number: 5 (lower is better)
Translates to: QALVVTQHVARLTDAAFLQHVAR*AHAALL
Trigger: AAGGAGGGCTGCGTGTGCCAATCTGGCTACGTGCTG...AAGGAAGGCTGCATCTGTCAATCTGGCTACGTGCTGAGTAACAACAAGTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
CDS TCA 90 bp TATCCCTTAGGGATGGTGACAGAGCTGTTCATCCAGCCAGAGCTCTaGGACCCAACACGGTTCCACAGAGGAATGGGAAAACTACCCGCA +
Preference number: 5 (lower is better)
Translates to: YPLGMVTELFIQPEL*DPTRFHRGMGKLPA
Trigger: TGCGGGTAGTTTTCCCATTCCTCTGTGGAACCGTGTTGGGTCTCAGAGCTCTGGCTGGATGAACAGCTCTGTCACCATCCCTAAGGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp GTGCTCCCCAAAGCAGCGTCACAAGATGGGGGATTCTTCTTCTTCTaGCACCTGGAAGAGACCCAATCCTTGTCCTCATCCTCTTCCACC +
Preference number: 5 (lower is better)
Translates to: VLPKAASQDGGFFFF*HLEETQSLSSSSST
Trigger: GGTGGAAGAGGATGAGGACAAGGATTGGGTCTCTTCCAGGTGTCAGAAGAAGAAGAATCCCCCATCTTGTGACGCTGCTTTGGGGAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp CAGCCCCTGTTGATCCAAGTCTTACCTGCCGGGATGAGAACACCCTaGGCATCTTTGCAGCCACACTCAATTCTGAGCACACACTTGTCG +
Preference number: 5 (lower is better)
Translates to: QPLLIQVLPAGMRTP*ASLQPHSILSTHLS
Trigger: CGACAAGTGTGTGCTCAGAATTGAGTGTGGCTGCAAAGATGCTCAGGGTGTTCTCATCCCGGCAGGTAAGACTTGGATCAACAGGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp GCCCGTCAGGGAGGGTCCAGTAGTCCGAATCCAGTCCCCATCATCTaGAGACATTTGAGACCAGTCACAGAAAGGTCTGGAATTGTCTTC +
Preference number: 5 (lower is better)
Translates to: ARQGGSSSPNPVPII*RHLRPVTERSGIVF
Trigger: GAAGACAATTCCAGACCTTTCTGTGACTGGTCTCAAATGTCTGCAGATGATGGGGACTGGATTCGGACTACTGGACCCTCCCTGACGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp CCTCATCGTGTGTCATCATGCCATCTGACTTCAGGTTGTCGTTGCTaGTGTCCCCGTCATAGTTCCCACAGAAACCACAGAGTTTGCCCG +
Preference number: 5 (lower is better)
Translates to: PHRVSSCHLTSGCRC*CPRHSSHRNHRVCP
Trigger: CGGGCAAACTCTGTGGTTTCTGTGGGAACTATGACGGGGACAGCAGCAACGACAACCTGAAGTCAGATGGCATGATGACACACGATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp GATGGCTATGATCATCAAAGCTCACGATCTGGGAATCCTCTGAGATaGGACACTCTCCCATCTCTGCAGCGCAGCGTAGCAGTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: DGYDHQSSRSGNPLR*DTLPSLQRSVAVLP
Trigger: AGGAAGGACTGCTACGCTGCGCTGCAGAGATGGGAGAGTGTCGCATCTCAGAGGATTCCCAGATCGTGAGCTTTGATGATCATAGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp GGAACAATGGGCCCAGGCAGGACCCTGAAGGGCAGTTTGGCAGTTTaGCTGGGCTTTCTCAAAGTCAATGGGCCTGCATTTTCCATTCAT +
Preference number: 5 (lower is better)
Translates to: GTMGPGRTLKGSLAV*LGFLKVNGPAFSIH
Trigger: ATGAATGGAAAATGCAGGCCCATTGACTTTGAGAAAGCCCAGGCAAACTGCCAAACTGCCCTTCAGGGTCCTGCCTGGGCCCATTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp GCAGGTACAGCTCTGGGTACAGTCTTCGGATATCCAAGTCTTGCCTaGCGGGATGAAGACACCCTGAGCATCTTTGCAGCCACAATGAGA +
Preference number: 5 (lower is better)
Translates to: AGTALGTVFGYPSLA*RDEDTLSIFAATMR
Trigger: TCTCATTGTGGCTGCAAAGATGCTCAGGGTGTCTTCATCCCGGCAGGCAAGACTTGGATATCCGAAGACTGTACCCAGAGCTGTACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp TCCCTGGGGGACACTGGAAATCCCAGCACCTCATGCTTCCTTTCATaGAGGTACAGCTCTGGGTACAGTCTTCGGATATCCAAGTCTTGC +
Preference number: 5 (lower is better)
Translates to: SLGDTGNPSTSCFLS*RYSSGYSLRISKSC
Trigger: GCAAGACTTGGATATCCGAAGACTGTACCCAGAGCTGTACCTGCATGAAAGGAAGCATGAGGTGCTGGGATTTCCAGTGTCCCCCAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp GATGGCTGTGGGCTGGGCACTGCAGAGCAATTTTGGTACAGTTACTaGCTCCATCAACACTGTCCTTGCATTCAGTCCCCAAGGGACACT +
Preference number: 5 (lower is better)
Translates to: DGCGLGTAEQFWYSY*LHQHCPCIQSPRDT
Trigger: AGTGTCCCTTGGGGACTGAATGCAAGGACAGTGTTGATGGAGGCAGTAACTGTACCAAAATTGCTCTGCAGTGCCCAGCCCACAGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CATTGGTCACTTCTGTGTGAACACCTGTCACTTCAGTGGGTACAGTaGGCACTTCTGTGTAGAGAGTGGTCTCTCCAGTGGGGAATGCGG +
Preference number: 5 (lower is better)
Translates to: HWSLLCEHLSLQWVQ*ALLCREWSLQWGMR
Trigger: CCGCATTCCCCACTGGAGAGACCACTCTCTACACAGAAGTGCCCACTGTACCCACTGAAGTGACAGGTGTTCACACAGAAGTGACCAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CCAAAGCAGCGTCACAAGATGGGGGATTCTTCTTCTTCTGACACCTaGAAGAGACCCAATCCTTGTCCTCATCCTCTTCCACCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: PKQRHKMGDSSSSDT*KRPNPCPHPLPPAS
Trigger: GCTGGCAGGTGGAAGAGGATGAGGACAAGGATTGGGTCTCTTCCAGGTGTCAGAAGAAGAAGAATCCCCCATCTTGTGACGCTGCTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CACATGTCAGTCACACAGTTATCCAGGAAGGATGAGGCCTTCAGGTaGAGCAGGCATGCCTCAAAGGGTCCACTTGGGTTGACAAGCTGT +
Preference number: 5 (lower is better)
Translates to: HMSVTQLSRKDEAFR*SRHASKGPLGLTSC
Trigger: ACAGCTTGTCAACCCAAGTGGACCCTTTGAGGCATGCCTGCTCCACCTGAAGGCCTCATCCTTCCTGGATAACTGTGTGACTGACATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CTGCTGCCATCATTGCTGTTCTTGCAGTATGTCCCTGGGGGACACTaGAAATCCCAGCACCTCATGCTTCCTTTCATGCAGGTACAGCTC +
Preference number: 5 (lower is better)
Translates to: LLPSLLFLQYVPGGH*KSQHLMLPFMQVQL
Trigger: GAGCTGTACCTGCATGAAAGGAAGCATGAGGTGCTGGGATTTCCAGTGTCCCCCAGGGACATACTGCAAGAACAGCAATGATGGCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CAGCCTCTGTTGATCCAGGTCTTATCTGCAGGGATGAGGACACCCTaGGTGTCTTTGCAGCCACACTCAATTCTGGGCACACACTTGTTG +
Preference number: 5 (lower is better)
Translates to: QPLLIQVLSAGMRTP*VSLQPHSILGTHLL
Trigger: CAACAAGTGTGTGCCCAGAATTGAGTGTGGCTGCAAAGACACCCAGGGTGTCCTCATCCCTGCAGATAAGACCTGGATCAACAGAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CAGCCTCTGTTGATCCAGGTCTTATCTGCAGGGATGAGGACACCCTaGGCATCTTTGCAGCCACACTCAATTCTGGGCACACACTTGTTG +
Preference number: 5 (lower is better)
Translates to: QPLLIQVLSAGMRTP*ASLQPHSILGTHLL
Trigger: CAACAAGTGTGTGCCCAGAATTGAGTGTGGCTGCAAAGATGCCCAGGGTGTCCTCATCCCTGCAGATAAGACCTGGATCAACAGAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp TTGAAATTTCTGCAGTGGATGGCTCCTGCTGAGCAGGTACAGGACTaGGTGCAGCCCCTGGAGATCCACGTCTTGTCTGCTGAGATGAAA +
Preference number: 5 (lower is better)
Translates to: LKFLQWMAPAEQVQD*VQPLEIHVLSAEMK
Trigger: TTTCATCTCAGCAGACAAGACGTGGATCTCCAGGGGCTGCACCCAGTCCTGTACCTGCTCAGCAGGAGCCATCCACTGCAGAAATTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp GGTGCAAGTACTGCTGCCTTCACTGTTGTCCTTGCAGTAGGTCTCTaGGGGACACTGGAAATTCTGGCACTGGATATTGCCTTCCACGCA +
Preference number: 5 (lower is better)
Translates to: GASTAAFTVVLAVGL*GTLEILALDIAFHA
Trigger: TGCGTGGAAGGCAATATCCAGTGCCAGAATTTCCAGTGTCCCCCAGAGACCTACTGCAAGGACAACAGTGAAGGCAGCAGTACTTGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CAGCCTGTGGAGAGCCATGTCTTGCCAGCCGGAATGACAGCGCCCTaGGTGTCTCTGCAGCCACACTCAATTTTAAGAATACACTTGTCT +
Preference number: 5 (lower is better)
Translates to: QPVESHVLPAGMTAP*VSLQPHSILRIHLS
Trigger: AGACAAGTGTATTCTTAAAATTGAGTGTGGCTGCAGAGACACCCAGGGCGCTGTCATTCCGGCTGGCAAGACATGGCTCTCCACAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp GGCAGTAGGTGTGATGGCTGTGGGCTGGGCACTGCAGAGCAATTTTaGTACAGTTACTGCCTCCATCAACACTGTCCTTGCATTCAGTCC +
Preference number: 5 (lower is better)
Translates to: GSRCDGCGLGTAEQF*YSYCLHQHCPCIQS
Trigger: GGACTGAATGCAAGGACAGTGTTGATGGAGGCAGTAACTGTACCAAAATTGCTCTGCAGTGCCCAGCCCACAGCCATCACACCTACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp CATCTTTACAGCCGCACTGTGTTCTGGGCACACATTTGTCCTCACTaGACACAAAGCCATGGTTGCAAAGACATCCCTCCCTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: HLYSRTVFWAHICPH*TQSHGCKDIPPCSW
Trigger: CCAGCTGCAGGGAGGGATGTCTTTGCAACCATGGCTTTGTGTTCAGTGAGGACAAATGTGTGCCCAGAACACAGTGCGGCTGTAAAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp TGTTGCCCTCATTATTGTCCAGGCAACGGGACCCTGTTGGGCAACTaGAGTCGTGACATTGAACAGTCCCTCCTTTGCAGGTGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: CCPHYCPGNGTLLGN*SRDIEQSLLCRCSS
Trigger: AGAACTGCACCTGCAAAGGAGGGACTGTTCAATGTCACGACTTCAGTTGCCCAACAGGGTCCCGTTGCCTGGACAATAATGAGGGCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp ATGCTGCGCCTTCACCTCCCAACTGTTGCCATAGACATGGACATTTaGGGTGAGTACTCCACTGGGCAGCATGAGTTCATTGGACTGGTC +
Preference number: 5 (lower is better)
Translates to: MLRLHLPTVAIDMDI*GEYSTGQHEFIGLV
Trigger: GACCAGTCCAATGAACTCATGCTGCCCAGTGGAGTACTCACCTCAAATGTCCATGTCTATGGCAACAGTTGGGAGGTGAAGGCGCAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp CCTCCTCATCGTGTGTCATCATGCCATCTGACTTCAGGTTGTCGTTaGTGCTGTCCCCGTCATAGTTCCCACAGAAACCACAGAGTTTGC +
Preference number: 5 (lower is better)
Translates to: PPHRVSSCHLTSGCR*CCPRHSSHRNHRVC
Trigger: GCAAACTCTGTGGTTTCTGTGGGAACTATGACGGGGACAGCAGCAACGACAACCTGAAGTCAGATGGCATGATGACACACGATGAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp TCTTGCAGTATGTCCCTGGGGGACACTGGAAATCCCAGCACCTCATaGTTCCTTTCATGCAGGTACAGCTCTGGGTACAGTCTTCGGATA +
Preference number: 5 (lower is better)
Translates to: SCSMSLGDTGNPSTS*FLSCRYSSGYSLRI
Trigger: TATCCGAAGACTGTACCCAGAGCTGTACCTGCATGAAAGGAAGCATGAGGTGCTGGGATTTCCAGTGTCCCCCAGGGACATACTGCAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp ACAGGCACAGGTTTGTGTGCAGCCTTTGTTGATCCAGATCTTGTCTaGAGGGATGAGGACACCCTGGGCATCTTTGCAGCCACACTCAAT +
Preference number: 5 (lower is better)
Translates to: TGTGLCAAFVDPDLV*RDEDTLGIFAATLN
Trigger: ATTGAGTGTGGCTGCAAAGATGCCCAGGGTGTCCTCATCCCTGCAGACAAGATCTGGATCAACAAAGGCTGCACACAAACCTGTGCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp GGACACGACATCGAAGTTCCTCTTCTTCTTTGGTCTTCCAGCCAGTaGACATATCCAACATACAGCGCTGCTCAAAGGGCTCTGGGGCTA +
Preference number: 5 (lower is better)
Translates to: GHDIEVPLLLWSSSQ*TYPTYSAAQRALGL
Trigger: TAGCCCCAGAGCCCTTTGAGCAGCGCTGTATGTTGGATATGTGCACTGGCTGGAAGACCAAAGAAGAAGAGGAACTTCGATGTCGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CAGGAGAGACATTGGTCACTTCTGTGTGAACACCTGTCACTTCAGTaGGTACAGTGGGCACTTCTGTGTAGAGAGTGGTCTCTCCAGTGG +
Preference number: 5 (lower is better)
Translates to: QERHWSLLCEHLSLQ*VQWALLCREWSLQW
Trigger: CCACTGGAGAGACCACTCTCTACACAGAAGTGCCCACTGTACCCACTGAAGTGACAGGTGTTCACACAGAAGTGACCAATGTCTCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CAGTGGTCTCTTCAGAAGCAATGGTGGTCTCTTCAGGAGGGACAGTaGTTTCCTCAGGAAAGATGCTGGCAGGAGGAACAGTGGTCACTT +
Preference number: 5 (lower is better)
Translates to: QWSLQKQWWSLQEGQ*FPQERCWQEEQWSL
Trigger: AAGTGACCACTGTTCCTCCTGCCAGCATCTTTCCTGAGGAAACCACTGTCCCTCCTGAAGAGACCACCATTGCTTCTGAAGAGACCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CAGCCTTTGTTGATCCAGATCTTGTCTGCAGGGATGAGGACACCCTaGGCATCTTTGCAGCCACACTCAATTCTGGGCACACACTTGTTG +
Preference number: 5 (lower is better)
Translates to: QPLLIQILSAGMRTP*ASLQPHSILGTHLL
Trigger: CAACAAGTGTGTGCCCAGAATTGAGTGTGGCTGCAAAGATGCCCAGGGTGTCCTCATCCCTGCAGACAAGATCTGGATCAACAAAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp TGGGTGCTGCTGATAAGCGCAGTCTGCTCTTGGCTGCATTCTGATTaGAGAAGGTCAGGCTCTTCGTCTCTTTCCTCTTCTTCTGGTAGG +
Preference number: 5 (lower is better)
Translates to: WVLLISAVCSWLHSD*RRSGSSSLSSSSGR
Trigger: CCTACCAGAAGAAGAGGAAAGAGACGAAGAGCCTGACCTTCTCCAATCAGAATGCAGCCAAGAGCAGACTGCGCTTATCAGCAGCACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp CTTCGAAGTCGCACTGGGGAAAGCTCTCTCCACAGGGAGCTATGCTaGTGGCATCCACAGCTATTGCTGGCTCTGGTATATTTCCAAACA +
Preference number: 5 (lower is better)
Translates to: LRSRTGESSLHRELC*WHPQLLLALVYFQT
Trigger: TGTTTGGAAATATACCAGAGCCAGCAATAGCTGTGGATGCCATCAGCATAGCTCCCTGTGGAGAGAGCTTTCCCCAGTGCGACTTCGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp ACAGAGGAATGGGAAAACTACCCGCAGGACTTCCCAACAGGAGCTTaGGTGTGGTACCTTTGCCAAGGCCGTACATGTGGTAAGCAAACT +
Preference number: 5 (lower is better)
Translates to: TEEWENYPQDFPTGA*VWYLCQGRTCGKQT
Trigger: AGTTTGCTTACCACATGTACGGCCTTGGCAAAGGTACCACACTCAAGCTCCTGTTGGGAAGTCCTGCGGGTAGTTTTCCCATTCCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp GTAGGGATGCTGGTCTCTTCAGGAAACACAGTGGTCACTTCTGTGTaGACACCTGTCATTTCTGTGGAGACAGTGGGCACTTCTGTGGGA +
Preference number: 5 (lower is better)
Translates to: VGMLVSSGNTVVTSV*TPVISVETVGTSVG
Trigger: TCCCACAGAAGTGCCCACTGTCTCCACAGAAATGACAGGTGTTCACACAGAAGTGACCACTGTGTTTCCTGAAGAGACCAGCATCCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp TCCTCTCATGCCTTCAAACATCAGCCAGCTTGGTATATCATGATCTaGTGGTACAGTGACAGTGGTGGGCATCCAAGAGGGACTCTGGGT +
Preference number: 5 (lower is better)
Translates to: SSHAFKHQPAWYIMI*WYSDSGGHPRGTLG
Trigger: ACCCAGAGTCCCTCTTGGATGCCCACCACTGTCACTGTACCAGCAGATCATGATATACCAAGCTGGCTGATGTTTGAAGGCATGAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp ATAGGTGGCTTGAGCCCCTGGTTCTGGCAGGCATCTTCAAAGGACTaGAGAGAATCACAAAGAGCACGGAAGAGCTCTCTGAATTCACAG +
Preference number: 5 (lower is better)
Translates to: IGGLSPWFWQASSKD*RESQRARKSSLNSQ
Trigger: CTGTGAATTCAGAGAGCTCTTCCGTGCTCTTTGTGATTCTCTGCAGTCCTTTGAAGATGCCTGCCAGAACCAGGGGCTCAAGCCACCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp CCTTATGGATTTTGGTGCAGTTGCTGCTGCCGTCACCACTGTCTTTaGAGTAAGTCCCCAAGGGACACTGGAAATTCTGGCACTGAACAG +
Preference number: 5 (lower is better)
Translates to: PYGFWCSCCCRHHCL*SKSPRDTGNSGTEQ
Trigger: CTGTTCAGTGCCAGAATTTCCAGTGTCCCTTGGGGACTTACTGCAAAGACAGTGGTGACGGCAGCAGCAACTGCACCAAAATCCATAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CAGGTAGGCGGTGTTTCCTCTCATGCCTTCAAACATCAGCCAGCTTaGTATATCATGATCTGCTGGTACAGTGACAGTGGTGGGCATCCA +
Preference number: 5 (lower is better)
Translates to: QVGGVSSHAFKHQPA*YIMICWYSDSGGHP
Trigger: TGGATGCCCACCACTGTCACTGTACCAGCAGATCATGATATACCAAGCTGGCTGATGTTTGAAGGCATGAGAGGAAACACCGCCTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CTGTGTGAACACCTGTCATTTCTGTGGAGACAGTGGGCACTTCTGTaGGAACAGTGGTCTCCCCAGTGGGAAAAGTGGTTACTTCTATGG +
Preference number: 5 (lower is better)
Translates to: LCEHLSFLWRQWALL*EQWSPQWEKWLLLW
Trigger: CCATAGAAGTAACCACTTTTCCCACTGGGGAGACCACTGTTCCCACAGAAGTGCCCACTGTCTCCACAGAAATGACAGGTGTTCACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CGGTTGGAACAAGAAGGCACACAGGAGGGAAGGCAGTCTGTGAATTaGCTGTTGGTTGGGCATTGTAGAGTGATTTCGGTGCAGTTAGAG +
Preference number: 5 (lower is better)
Translates to: RLEQEGTQEGRQSVN*LLVGHCRVISVQLE
Trigger: CTCTAACTGCACCGAAATCACTCTACAATGCCCAACCAACAGCCAATTCACAGACTGCCTTCCCTCCTGTGTGCCTTCTTGTTCCAACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp GGCAGTCGGTGTAGTTGCTGTGGGTGGGGCACTGCAGAGTTATTTTaGCACAGTTACTGTTGCCATCTTCATTGTCCTTGCAGTAAGTCC +
Preference number: 5 (lower is better)
Translates to: GSRCSCCGWGTAELF*HSYCCHLHCPCSKS
Trigger: GGACTTACTGCAAGGACAATGAAGATGGCAACAGTAACTGTGCCAAAATAACTCTGCAGTGCCCCACCCACAGCAACTACACCGACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp ACAGTTACTGTTGCCCTCATTATTGTCCAGGCAACGGGACCCTGTTaGGCAACTGAAGTCGTGACATTGAACAGTCCCTCCTTTGCAGGT +
Preference number: 5 (lower is better)
Translates to: TVTVALIIVQATGPC*ATEVVTLNSPSFAG
Trigger: ACCTGCAAAGGAGGGACTGTTCAATGTCACGACTTCAGTTGCCCAACAGGGTCCCGTTGCCTGGACAATAATGAGGGCAACAGTAACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp TCCTCCTCCCCATGGTTGTTCTTGTTGCCATGTAAACATACACTCTaGGCAGTAAGACAGGGACTAACACCATCACAAGCACTCCCGGCA +
Preference number: 5 (lower is better)
Translates to: SSSPWLFLLPCKHTL*AVRQGLTPSQALPA
Trigger: TGCCGGGAGTGCTTGTGATGGTGTTAGTCCCTGTCTTACTGCCCAGAGTGTATGTTTACATGGCAACAAGAACAACCATGGGGAGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp GTGTTTCCTCTCATGCCTTCAAACATCAGCCAGCTTGGTATATCATaGTCTGCTGGTACAGTGACAGTGGTGGGCATCCAAGAGGGACTC +
Preference number: 5 (lower is better)
Translates to: VFPLMPSNISQLGIS*SAGTVTVVGIQEGL
Trigger: GAGTCCCTCTTGGATGCCCACCACTGTCACTGTACCAGCAGATCATGATATACCAAGCTGGCTGATGTTTGAAGGCATGAGAGGAAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp GGCCACACGGGTAGCACCACCCTTTGGTTGTTCAGCACAACCTTTTaGCCTTTGAACATGGAGATTTTGAGGTCAAAGACCTGCACATGG +
Preference number: 5 (lower is better)
Translates to: GHTGSTTLWLFSTTF*PLNMEILRSKTCTW
Trigger: CCATGTGCAGGTCTTTGACCTCAAAATCTCCATGTTCAAAGGTCAAAAGGTTGTGCTGAACAACCAAAGGGTGGTGCTACCCGTGTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp TCTCATGCCTTCAAACATCAGCCAGCTTGGTATATCATGATCTGCTaGTACAGTGACAGTGGTGGGCATCCAAGAGGGACTCTGGGTGTT +
Preference number: 5 (lower is better)
Translates to: SHAFKHQPAWYIMIC*YSDSGGHPRGTLGV
Trigger: AACACCCAGAGTCCCTCTTGGATGCCCACCACTGTCACTGTACCAGCAGATCATGATATACCAAGCTGGCTGATGTTTGAAGGCATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp CTTCAAACATCAGCCAGCTTGGTATATCATGATCTGCTGGTACAGTaGCAGTGGTGGGCATCCAAGAGGGACTCTGGGTGTTCACATGTT +
Preference number: 5 (lower is better)
Translates to: LQTSASLVYHDLLVQ*QWWASKRDSGCSHV
Trigger: AACATGTGAACACCCAGAGTCCCTCTTGGATGCCCACCACTGTCACTGTACCAGCAGATCATGATATACCAAGCTGGCTGATGTTTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp CAGAGGCTTCAAGGATTTTCCAAGCAGCTCCCAGCAGAAGTGAGTTaGCTGCTGGCTTCATGTCTACACGCAAATTGTCATCCATACTGT +
Preference number: 5 (lower is better)
Translates to: QRLQGFSKQLPAEVS*LLASCLHANCHPYC
Trigger: ACAGTATGGATGACAATTTGCGTGTAGACATGAAGCCAGCAGGCAACTCACTTCTGCTGGGAGCTGCTTGGAAAATCCTTGAAGCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp TCAATGGGCCTGCATTTTCCATTCATGATCTCCTGCTGTTCCACTTaGAGGTTCTGCCCTTCGATTTTCTGGCAATTTGGGTCCATGCTC +
Preference number: 5 (lower is better)
Translates to: SMGLHFPFMISCCST*RFCPSIFWQFGSML
Trigger: GAGCATGGACCCAAATTGCCAGAAAATCGAAGGGCAGAACCTCCAAGTGGAACAGCAGGAGATCATGAATGGAAAATGCAGGCCCATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 90 bp TTGCCTGGGCTTTCTCAAAGTCAATGGGCCTGCATTTTCCATTCATaGTCTCCTGCTGTTCCACTTGGAGGTTCTGCCCTTCGATTTTCT +
Preference number: 5 (lower is better)
Translates to: LPGLSQSQWACIFHS*SPAVPLGGSALRFS
Trigger: AGAAAATCGAAGGGCAGAACCTCCAAGTGGAACAGCAGGAGATCATGAATGGAAAATGCAGGCCCATTGACTTTGAGAAAGCCCAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp CAATTTGGGTCCATGCTCTTATCTTTCCAGCTATTCATGAACTCCTaGTCATCCTCTGCTAGTTCACCACTGGGTGTCATGAGCTCATCC +
Preference number: 5 (lower is better)
Translates to: QFGSMLLSFQLFMNS*SSSASSPLGVMSSS
Trigger: GGATGAGCTCATGACACCCAGTGGTGAACTAGCAGAGGATGAGCAGGAGTTCATGAATAGCTGGAAAGATAAGAGCATGGACCCAAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp CTGCTGTTCCACTTGGAGGTTCTGCCCTTCGATTTTCTGGCAATTTaGGTCCATGCTCTTATCTTTCCAGCTATTCATGAACTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: LLFHLEVLPFDFLAI*VHALIFPAIHELLL
Trigger: GAGCAGGAGTTCATGAATAGCTGGAAAGATAAGAGCATGGACCCAAATTGCCAGAAAATCGAAGGGCAGAACCTCCAAGTGGAACAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS-3UTR CAA 90 bp GAGTTATTTTGGCGCAGTTACTGTTGCCATCTTCATTGTCCTTGCAGTAAGTCCTTAGGACTGATATCTTaGCAGAGGCCCTCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: ELFWRSYCCHLHCPCSKSLGLIS*QRPSGS
Trigger: GGACCCAGAGGGCCTCTGCAAAGATATCAGTCCTAA...GGACTTACTGCAAGGACAATGAAGATGGCAACAGTAACTGCGCCAAAATAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
CDS TCA 90 bp TGCCTCCATCAACACTGTCCTTGCATTCAGTCCCCAAGGGACACTTaGAATTCCAGCAATGAATGTTCCCTCCTTTGCAGGTACACTTTT +
Preference number: 5 (lower is better)
Translates to: CLHQHCPCIQSPRDT*NSSNECSLLCRYTF
Trigger: AAAAGTGTACCTGCAAAGGAGGGAACATTCATTGCTGGAATTTCAAGTGTCCCTTGGGGACTGAATGCAAGGACAGTGTTGATGGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 90 bp CATTCTTATAGCTACAGGCTTCCTGAGCCTTACATTTCCAGGGCTTaGAGAGAATATGGTTGTGGCTTTCACAAGTGCAGATCTCCTTGC +
Preference number: 5 (lower is better)
Translates to: HSYSYRLPEPYISRA*REYGCGFHKCRSPC
Trigger: GCAAGGAGATCTGCACTTGTGAAAGCCACAACCATATTCTCTGCAAGCCCTGGAAATGTAAGGCTCAGGAAGCCTGTAGCTATAAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 90 bp ATGATCTCCTGCTGTTCCACTTGGAGGTTCTGCCCTTCGATTTTCTaGCAATTTGGGTCCATGCTCTTATCTTTCCAGCTATTCATGAAC +
Preference number: 5 (lower is better)
Translates to: MISCCSTWRFCPSIF*QFGSMLLSFQLFMN
Trigger: GTTCATGAATAGCTGGAAAGATAAGAGCATGGACCCAAATTGCCAGAAAATCGAAGGGCAGAACCTCCAAGTGGAACAGCAGGAGATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CACAGCCCTCCTCGCAGGTGGAGGGGGCTTCGGGGCTaGTGCCCTCACAGTGGCCATCAGGGTCCGAGCAGG +
Preference number: 6 (lower is better)
Translates to: HSPPRRWRGLRG*CPHSGHQGPSR
Trigger: CCTGCTCGGACCCTGATGGCCACTGTGAGGGCACCAGCCCCGAAGCCCCCTCCACCTGCGAGGAGGGCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp AGCCCTCCTCGCAGGTGGAGGGGGCTTCGGGGCTGGTaGCCTCACAGTGGCCATCAGGGTCCGAGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: SPPRRWRGLRGW*PHSGHQGPSRK
Trigger: CTTCCTGCTCGGACCCTGATGGCCACTGTGAGGGCACCAGCCCCGAAGCCCCCTCCACCTGCGAGGAGGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CACAGACACAGCCCTCCTGGCAGGCGGAGGGGGCTTTaGTGGTGGAGCCCCCACAGTGGCCTTCTGGGTCCG +
Preference number: 6 (lower is better)
Translates to: HRHSPPGRRRGL*WWSPHSGLLGP
Trigger: CGGACCCAGAAGGCCACTGTGGGGGCTCCACCACCAAAGCCCCCTCCGCCTGCCAGGAGGGCTGTGTCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CGCAGCCCTCCTTGCAGGTGGAGGGGGCTTCGGGGCTaGTGCCTCTACAGAGGCCATCTGGGTCAGAGCAGG +
Preference number: 6 (lower is better)
Translates to: RSPPCRWRGLRG*CLYRGHLGQSR
Trigger: CCTGCTCTGACCCAGATGGCCTCTGTAGAGGCACCAGCCCCGAAGCCCCCTCCACCTGCAAGGAGGGCTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CCCCTCCCACGCAGGCACAGCTCTGGGTGCAGCCCCTaGAGATCCAGGTCTTGCCTGCCGGGACAAAGCCAC +
Preference number: 6 (lower is better)
Translates to: PLPRRHSSGCSP*RSRSCLPGQSH
Trigger: GTGGCTTTGTCCCGGCAGGCAAGACCTGGATCTCCAGGGGCTGCACCCAGAGCTGTGCCTGCGTGGGAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp AGCAGCCCTCCTTGCAGGTGGAGGGAACTTCAGGGCTaGTGCCCCCACAGAGGCCCTCTGGGTCCGAGCAGG +
Preference number: 6 (lower is better)
Translates to: SSPPCRWRELQG*CPHRGPLGPSR
Trigger: CCTGCTCGGACCCAGAGGGCCTCTGTGGGGGCACCAGCCCTGAAGTTCCCTCCACCTGCAAGGAGGGCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp TCACAGACACAGCCCTCCTGGCAGGCGGAGGGGGCTTaGGTGGTGGAGCCCCCACAGTGGCCTTCTGGGTCC +
Preference number: 6 (lower is better)
Translates to: SQTQPSWQAEGA*VVEPPQWPSGS
Trigger: GGACCCAGAAGGCCACTGTGGGGGCTCCACCACCAAAGCCCCCTCCGCCTGCCAGGAGGGCTGTGTCTGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GGGGGCTTTGGTGGTGGAGCCCCCACAGTGGCCTTCTaGGTCCGAGCAGGAAGGCTGACAGGGTGGAAGGCA +
Preference number: 6 (lower is better)
Translates to: GGFGGGAPTVAF*VRAGRLTGWKA
Trigger: TGCCTTCCACCCTGTCAGCCTTCCTGCTCGGACCCAGAAGGCCACTGTGGGGGCTCCACCACCAAAGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp TCGCAGACACAGCCCTCCTGGCAGGCGGAGGGGGCTTaGGTGGTGGAGCCCTCACAGTGGCCTTCTGAGTCC +
Preference number: 6 (lower is better)
Translates to: SQTQPSWQAEGA*VVEPSQWPSES
Trigger: GGACTCAGAAGGCCACTGTGAGGGCTCCACCACCAAAGCCCCCTCCGCCTGCCAGGAGGGCTGTGTCTGCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp AGCCCTCCTTGCAGGTGGAGGGGGCTTCGGGGCTGGTaGCTCTACAGAGGCCATCTGGGTCAGAGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: SPPCRWRGLRGW*LYRGHLGQSRK
Trigger: CTTCCTGCTCTGACCCAGATGGCCTCTGTAGAGGCACCAGCCCCGAAGCCCCCTCCACCTGCAAGGAGGGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GCTCTGGGTACAGCCTGGGGAGGTCCAGGTCTTGCCTaGCGGGATGAGAGCACCCTGGGCGTCTTTGCAGTC +
Preference number: 6 (lower is better)
Translates to: ALGTAWGGPGLA*RDESTLGVFAV
Trigger: GACTGCAAAGACGCCCAGGGTGCTCTCATCCCGGCAGGCAAGACCTGGACCTCCCCAGGCTGTACCCAGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp CACAGCTCTGGGTGCAGCCCCTGGAGATCCAGGTCTTaGCTGCCGGGACAAAGCCACCCTGGGCGTCTTTGC +
Preference number: 6 (lower is better)
Translates to: HSSGCSPWRSRS*LPGQSHPGRLC
Trigger: GCAAAGACGCCCAGGGTGGCTTTGTCCCGGCAGGCAAGACCTGGATCTCCAGGGGCTGCACCCAGAGCTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CAGATGCAGCCCTCCCTGCAGGTGGCGGGGACTTTGTaGCCAGAGCCCTCACAGCGGCTGTCTGGATCCAAG +
Preference number: 6 (lower is better)
Translates to: QMQPSLQVAGTL*PEPSQRLSGSK
Trigger: CTTGGATCCAGACAGCCGCTGTGAGGGCTCTGGCCACAAAGTCCCCGCCACCTGCAGGGAGGGCTGCATCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CATAGTCAGGTTGGCAGATGCAGCCCTCCCTGCAGGTaGCGGGGACTTTGTGGCCAGAGCCCTCACAGCGGC +
Preference number: 6 (lower is better)
Translates to: HSQVGRCSPPCR*RGLCGQSPHSG
Trigger: GCCGCTGTGAGGGCTCTGGCCACAAAGTCCCCGCCACCTGCAGGGAGGGCTGCATCTGCCAACCTGACTATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GAGGCCCTCGGGGTCCAAGCACGAGGGTGGACAGGATaGAAGGCAGTTGGTGTAGTGGCTATGGGCCGGGCA +
Preference number: 6 (lower is better)
Translates to: EALGVQARGWTG*KAVGVVAMGRA
Trigger: TGCCCGGCCCATAGCCACTACACCAACTGCCTTCCATCCTGTCCACCCTCGTGCTTGGACCCCGAGGGCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CAAGTGGAGGGGACTCTGGGGCCAGAGGCTTCACAGTaGCCCTCTGGGTCCGAGCAAGAAGGTGGACAGGGG +
Preference number: 6 (lower is better)
Translates to: QVEGTLGPEASQ*PSGSEQEGGQG
Trigger: CCCCTGTCCACCTTCTTGCTCGGACCCAGAGGGCCACTGTGAAGCCTCTGGCCCCAGAGTCCCCTCCACTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GCACAGCTCTGGGTACAGCCTGGGGAGGTCCAGGTCTaGCCTGCCGGGATGAGAGCACCCTGGGCGTCTTTG +
Preference number: 6 (lower is better)
Translates to: AQLWVQPGEVQV*PAGMRAPWASL
Trigger: CAAAGACGCCCAGGGTGCTCTCATCCCGGCAGGCAAGACCTGGACCTCCCCAGGCTGTACCCAGAGCTGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp CGAGCACAAAGCCAGGGTTGCAGAGGCAGCCTTCCCTaGAAGTGGAGGGGACTCTGGGGCCAGAGGCTTCAC +
Preference number: 6 (lower is better)
Translates to: RAQSQGCRGSLP*KWRGLWGQRLH
Trigger: GTGAAGCCTCTGGCCCCAGAGTCCCCTCCACTTGCAGGGAAGGCTGCCTCTGCAACCCTGGCTTTGTGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GGCCCCACACCCTGCTTCCCTGTTGGTCCCTTCTTCTaGGTCCACTTAGCCCCAGTGGCAGTTGGGACCCAG +
Preference number: 6 (lower is better)
Translates to: GPTPCFPVGPFF*VHLAPVAVGTQ
Trigger: CTGGGTCCCAACTGCCACTGGGGCTAAGTGGACCCAGAAGAAGGGACCAACAGGGAAGCAGGGTGTGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp TGTCTCCGTTGGTCTCACACTGGCCATACACACAACTaGAGAAGCTGGCCTGCGGGGGCACCGCCTCGTGGC +
Preference number: 6 (lower is better)
Translates to: CLRWSHTGHTHN*RSWPAGAPPRG
Trigger: GCCACGAGGCGGTGCCCCCGCAGGCCAGCTTCTCCAGTTGTGTGTATGGCCAGTGTGAGACCAACGGAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GGCAGCCCTCCTTGCAGGTGGAAGGGACTTTGGGGCTaGTCTGCTCACAGCTGCCATCCAGGTTGGCACAGG +
Preference number: 6 (lower is better)
Translates to: GSPPCRWKGLWG*SAHSCHPGWHR
Trigger: CCTGTGCCAACCTGGATGGCAGCTGTGAGCAGACCAGCCCCAAAGTCCCTTCCACCTGCAAGGAGGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CCCCAGGGGTACCCACTCACCGGGATGAGAGCACCCTaGGCGTCTTTGCAGTCACACTCAGCCCTGAGCACA +
Preference number: 6 (lower is better)
Translates to: PQGYPLTGMRAP*ASLQSHSALST
Trigger: TGTGCTCAGGGCTGAGTGTGACTGCAAAGACGCCCAGGGTGCTCTCATCCCGGTGAGTGGGTACCCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
CDS CAA 72 bp GCCCCTCCTGTGCAGGCACAGCTCTGGGTACAGTCCTaGGAGGTCCAGGTCTTGCCTGCCGGAACAAGGCCA +
Preference number: 6 (lower is better)
Translates to: APPVQAQLWVQS*EVQVLPAGTRP
Trigger: TGGCCTTGTTCCGGCAGGCAAGACCTGGACCTCCAAGGACTGTACCCAGAGCTGTGCCTGCACAGGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp GCGCAGCGTAGCAGTCCTTCCTGGCGCAAACACACGTGGTTGGCCTaGCAGGCCGTTGGGCTGCAGGTGATGTTGCTGTGGGCTGAGCAT +
Preference number: 6 (lower is better)
Translates to: AQRSSPSWRKHTWLA*QAVGLQVMLLWAEH
Trigger: ATGCTCAGCCCACAGCAACATCACCTGCAGCCCAACGGCCTGCAAGGCCAACCACGTGTGTTTGCGCCAGGAAGGACTGCTACGCTGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp CAGCCTTCCACGCAGGGGCCTTCACAGACCTTGGGGGTCACAAATTaGGCACAGGACGCCGGGCAGGGTGTCATGCAGCGCTGGTACACA +
Preference number: 6 (lower is better)
Translates to: QPSTQGPSQTLGVTN*AQDAGQGVMQRWYT
Trigger: TGTGTACCAGCGCTGCATGACACCCTGCCCGGCGTCCTGTGCCAAATTTGTGACCCCCAAGGTCTGTGAAGGCCCCTGCGTGGAAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp TACAGCCTGGGGAGGTCCAGGTCTTGCCTGCCGGGATaGGAGCACCCTGGGCGTCTTTGCAGTCACACTCAG +
Preference number: 6 (lower is better)
Translates to: YSLGRSRSCLPG*EHPGRLCSHTQ
Trigger: CTGAGTGTGACTGCAAAGACGCCCAGGGTGCTCTCATCCCGGCAGGCAAGACCTGGACCTCCCCAGGCTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GCACCACATAGCCAGGTTGACAGAGGCAGCCCTCCTTaGAGGGAGACGGGACTTTGGGACTGGTCCCCTCAC +
Preference number: 6 (lower is better)
Translates to: APHSQVDRGSPP*RETGLWDWSPH
Trigger: GTGAGGGGACCAGTCCCAAAGTCCCGTCTCCCTGCAAGGAGGGCTGCCTCTGTCAACCTGGCTATGTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GGTCCAAGCACGAGGGTGGACAGGATGGAAGGCAGTTaGTGTAGTGGCTATGGGCCGGGCACTGCAGAGGGA +
Preference number: 6 (lower is better)
Translates to: GPSTRVDRMEGS*CSGYGPGTAEG
Trigger: TCCCTCTGCAGTGCCCGGCCCATAGCCACTACACCAACTGCCTTCCATCCTGTCCACCCTCGTGCTTGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GCCCTCACAGAGGCCCTCGGGGTCCAAGCACGAGGGTaGACAGGATGGAAGGCAGTTGGTGTAGTGGCTATG +
Preference number: 6 (lower is better)
Translates to: ALTEALGVQARG*TGWKAVGVVAM
Trigger: CATAGCCACTACACCAACTGCCTTCCATCCTGTCCACCCTCGTGCTTGGACCCCGAGGGCCTCTGTGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GAGGTCCAGGTCTTGCCTGCCGGGATGAGAGCACCCTaGGCGTCTTTGCAGTCACACTCAGCCCTGAGCACA +
Preference number: 6 (lower is better)
Translates to: EVQVLPAGMRAP*ASLQSHSALST
Trigger: TGTGCTCAGGGCTGAGTGTGACTGCAAAGACGCCCAGGGTGCTCTCATCCCGGCAGGCAAGACCTGGACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GACAGAGGCAGCCCTCCTTGCAGGTGGAAGGGACTTTaGGGCTGGTCTGCTCACAGCTGCCATCCAGGTTGG +
Preference number: 6 (lower is better)
Translates to: DRGSPPCRWKGL*GWSAHSCHPGW
Trigger: CCAACCTGGATGGCAGCTGTGAGCAGACCAGCCCCAAAGTCCCTTCCACCTGCAAGGAGGGCTGCCTCTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GGCAGCCCTCCTTGCAGGGAGACGGGACTTTGGGACTaGTCCCCTCACAGTGGCCATCCAGATCAGTACAGG +
Preference number: 6 (lower is better)
Translates to: GSPPCRETGLWD*SPHSGHPDQYR
Trigger: CCTGTACTGATCTGGATGGCCACTGTGAGGGGACCAGTCCCAAAGTCCCGTCTCCCTGCAAGGAGGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GACAGAGGCAGCCCTCCTTGCAGGGAGACGGGACTTTaGGACTGGTCCCCTCACAGTGGCCATCCAGATCAG +
Preference number: 6 (lower is better)
Translates to: DRGSPPCRETGL*DWSPHSGHPDQ
Trigger: CTGATCTGGATGGCCACTGTGAGGGGACCAGTCCCAAAGTCCCGTCTCCCTGCAAGGAGGGCTGCCTCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp AAGGGTCCCTGGGGGTCCACAAGCACCCTACAGGCCTaGGTGCTGCTGATAAGCGCAGTCTGCTCTTGGCTG +
Preference number: 6 (lower is better)
Translates to: KGPWGSTSTLQA*VLLISAVCSWL
Trigger: CAGCCAAGAGCAGACTGCGCTTATCAGCAGCACCCAGGCCTGTAGGGTGCTTGTGGACCCCCAGGGACCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp CACTGGATATTGCCTTCCACGCAGGCACAGCTCTGGGTACAGCCTTaGGAGGTCCAGGTCTTGCCTGCCGGAATGATGGCACCCCGGGCA +
Preference number: 6 (lower is better)
Translates to: HWILPSTQAQLWVQP*EVQVLPAGMMAPRA
Trigger: TGCCCGGGGTGCCATCATTCCGGCAGGCAAGACCTGGACCTCCAAAGGCTGTACCCAGAGCTGTGCCTGCGTGGAAGGCAATATCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp CCTGTGCAGGCACAGCTCTGGGTACAGTCCTTGGAGGTCCAGGTCTaGCCTGCCGGAACAAGGCCACCCTCAGCATCTTTGCAGTCGCAG +
Preference number: 6 (lower is better)
Translates to: PVQAQLWVQSLEVQV*PAGTRPPSASLQSQ
Trigger: CTGCGACTGCAAAGATGCTGAGGGTGGCCTTGTTCCGGCAGGCAAGACCTGGACCTCCAAGGACTGTACCCAGAGCTGTGCCTGCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp GCACAGGACGCCGGGCAGGGTGTCATGCAGCGCTGGTACACAGTATaGGCAGGACATGTCATGGCACAGTGTGTGTGGTCCCGCCAACCA +
Preference number: 6 (lower is better)
Translates to: AQDAGQGVMQRWYTV*AGHVMAQCVWSRQP
Trigger: TGGTTGGCGGGACCACACACACTGTGCCATGACATGTCCTGCCAATACTGTGTACCAGCGCTGCATGACACCCTGCCCGGCGTCCTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp CCCCAGGGGTACCCACTCACCGGGATGAGAGCACCCTGGGCGTCTTaGCAGTCACACTCAGCCCTGAGCACACACTTGTCACTGTTCAGC +
Preference number: 6 (lower is better)
Translates to: PQGYPLTGMRAPWAS*QSHSALSTHLSLFS
Trigger: GCTGAACAGTGACAAGTGTGTGCTCAGGGCTGAGTGTGACTGCAAAGACGCCCAGGGTGCTCTCATCCCGGTGAGTGGGTACCCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
CDS TCA 72 bp GATAGGAGCCGTCCTGGTCACTGCAGCCACACTGTCTaGGGGGCACACAGGTGGTTCCACTCAGGATGTGGC +
Preference number: 6 (lower is better)
Translates to: DRSRPGHCSHTV*GAHRWFHSGCG
Trigger: GCCACATCCTGAGTGGAACCACCTGTGTGCCCCTCAGACAGTGTGGCTGCAGTGACCAGGACGGCTCCTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp GGTACCCGGGAGGAACAATGGGCCCAGGCAGGACCCTaGAGGGCAGTTTGGCAGTTTGCCTGGGCTTTCTCA +
Preference number: 6 (lower is better)
Translates to: GTREEQWAQAGP*RAVWQFAWAFS
Trigger: TGAGAAAGCCCAGGCAAACTGCCAAACTGCCCTTCAGGGTCCTGCCTGGGCCCATTGTTCCTCCCGGGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp GCTCTGGGTACAGCCTGGAGAGGTCCAGGTCTTGCCTaGCGGGATGAGAGCACCCTGTGCATCTTTGCAGCC +
Preference number: 6 (lower is better)
Translates to: ALGTAWRGPGLA*RDESTLCIFAA
Trigger: GGCTGCAAAGATGCACAGGGTGCTCTCATCCCGTCAGGCAAGACCTGGACCTCTCCAGGCTGTACCCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp ACTGTTGCCGTCCTCGATGTCCTGGCACTCGGCTCCTaGGGGGCACTGGAAGTCGTGGCACTGAACAAGTCC +
Preference number: 6 (lower is better)
Translates to: TVAVLDVLALGS*GALEVVALNKS
Trigger: GGACTTGTTCAGTGCCACGACTTCCAGTGCCCCTCAGGAGCCGAGTGCCAGGACATCGAGGACGGCAACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp CAGCGCTGCTCAAAGGGCTCTGGGGCTATGATCTGGTaGCATGCAGCAAAGGGTCCCTGGGGGTCCACAAGC +
Preference number: 6 (lower is better)
Translates to: QRCSKGSGAMIW*HAAKGPWGSTS
Trigger: GCTTGTGGACCCCCAGGGACCCTTTGCTGCATGTCACCAGATCATAGCCCCAGAGCCCTTTGAGCAGCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp TCAGCACATAGTCAGGTTCACAAACGCAGCCCTCCTTaGAGGTGGAGGGGGCTTCGGGGCTGGTGCCTCTAC +
Preference number: 6 (lower is better)
Translates to: SAHSQVHKRSPP*RWRGLRGWCLY
Trigger: GTAGAGGCACCAGCCCCGAAGCCCCCTCCACCTGCAAGGAGGGCTGCGTTTGTGAACCTGACTATGTGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp CCGGGCACTGGAGAGGAATACTGGTGCAGTTGCTGTTaGCGTCCTCCAGGTCCTGGCAGTAAGCCTCTGAGG +
Preference number: 6 (lower is better)
Translates to: PGTGEEYWCSCC*RPPGPGSKPLR
Trigger: CCTCAGAGGCTTACTGCCAGGACCTGGAGGACGGCAACAGCAACTGCACCAGTATTCCTCTCCAGTGCCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp TGTGGGCCGGGCACTGGAGAGGAATACTGGTGCAGTTaGTGTTGCCGTCCTCCAGGTCCTGGCAGTAAGCCT +
Preference number: 6 (lower is better)
Translates to: CGPGTGEEYWCS*CCRPPGPGSKP
Trigger: AGGCTTACTGCCAGGACCTGGAGGACGGCAACAGCAACTGCACCAGTATTCCTCTCCAGTGCCCGGCCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GCTCTGGGTACAGCCTTTGGAGGTCCAGGTCTTGCCTaGCGGAATGATGGCACCCCGGGCATCTTTACAGCC +
Preference number: 6 (lower is better)
Translates to: ALGTAFGGPGLA*RNDGTPGIFTA
Trigger: GGCTGTAAAGATGCCCGGGGTGCCATCATTCCGGCAGGCAAGACCTGGACCTCCAAAGGCTGTACCCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GACACTGGGAACTCTGGCACTGAACAACCCCTCCCATaGAGGCACAGCTCTGGGTACAGCCTGGAGAGGTCC +
Preference number: 6 (lower is better)
Translates to: DTGNSGTEQPLP*RHSSGYSLERS
Trigger: GGACCTCTCCAGGCTGTACCCAGAGCTGTGCCTGCATGGGAGGGGTTGTTCAGTGCCAGAGTTCCCAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp CCCTCCTTGCAGGTGGAAGGGACTTTGGGGCTGGTCTaGTCACAGCTGCCATCCAGGTTGGCACAGGAAGGT +
Preference number: 6 (lower is better)
Translates to: PSLQVEGTLGLV*SQLPSRLAQEG
Trigger: ACCTTCCTGTGCCAACCTGGATGGCAGCTGTGAGCAGACCAGCCCCAAAGTCCCTTCCACCTGCAAGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GCAGCACATAGCCAGATTGACAGAAGCAGCCCTCCTTaGAGGTGGAGGGAACTTCAGGGCTGGTGCCCCCAC +
Preference number: 6 (lower is better)
Translates to: AAHSQIDRSSPP*RWRELQGWCPH
Trigger: GTGGGGGCACCAGCCCTGAAGTTCCCTCCACCTGCAAGGAGGGCTGCTTCTGTCAATCTGGCTATGTGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GAAGTCTTCAGCAGGCCCCACACCCTGCTTCCCTGTTaGTCCCTTCTTCTGGGTCCACTTAGCCCCAGTGGC +
Preference number: 6 (lower is better)
Translates to: EVFSRPHTLLPC*SLLLGPLSPSG
Trigger: GCCACTGGGGCTAAGTGGACCCAGAAGAAGGGACCAACAGGGAAGCAGGGTGTGGGGCCTGCTGAAGACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CAACTGGAGAAGCTGGCCTGCGGGGGCACCGCCTCGTaGCAATTGGAGAAAGGCCCAAGAGGGTTCATCAAG +
Preference number: 6 (lower is better)
Translates to: QLEKLACGGTAS*QLEKGPRGFIK
Trigger: CTTGATGAACCCTCTTGGGCCTTTCTCCAATTGCCACGAGGCGGTGCCCCCGCAGGCCAGCTTCTCCAGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp TGGTCTCACACTGGCCATACACACAACTGGAGAAGCTaGCCTGCGGGGGCACCGCCTCGTGGCAATTGGAGA +
Preference number: 6 (lower is better)
Translates to: WSHTGHTHNWRS*PAGAPPRGNWR
Trigger: TCTCCAATTGCCACGAGGCGGTGCCCCCGCAGGCCAGCTTCTCCAGTTGTGTGTATGGCCAGTGTGAGACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CTGCAGTGGATGGCTCCTGCTGAGCAGGTACAGGACTaGGTGCAGCCCCTGGAGATCCACGTCTTGTCTGCT +
Preference number: 6 (lower is better)
Translates to: LQWMAPAEQVQD*VQPLEIHVLSA
Trigger: AGCAGACAAGACGTGGATCTCCAGGGGCTGCACCCAGTCCTGTACCTGCTCAGCAGGAGCCATCCACTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp AGTAGCCAGGTTGACAGAGGCAGCCCTCCTTGCAGGTaGAAGGGACTTTGGGGCTGGTCTGCTCACAGCTGC +
Preference number: 6 (lower is better)
Translates to: SSQVDRGSPPCR*KGLWGWSAHSC
Trigger: GCAGCTGTGAGCAGACCAGCCCCAAAGTCCCTTCCACCTGCAAGGAGGGCTGCCTCTGTCAACCTGGCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp TGGCAGAGGCAGCCTTCGATGCAGGTAGAGGGCCTCTaGAGGCTGGTGCTCTCACAGCGGTCATTCACGTTG +
Preference number: 6 (lower is better)
Translates to: WQRQPSMQVEGL*RLVLSQRSFTL
Trigger: CAACGTGAATGACCGCTGTGAGAGCACCAGCCTCCAGAGGCCCTCTACCTGCATCGAAGGCTGCCTCTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CATAGCCAGATTGACAGAAGCAGCCCTCCTTGCAGGTaGAGGGAACTTCAGGGCTGGTGCCCCCACAGAGGC +
Preference number: 6 (lower is better)
Translates to: HSQIDRSSPPCR*RELQGWCPHRG
Trigger: GCCTCTGTGGGGGCACCAGCCCTGAAGTTCCCTCCACCTGCAAGGAGGGCTGCTTCTGTCAATCTGGCTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GAGAAGCTGGCCTGCGGGGGCACCGCCTCGTGGCAATaGGAGAAAGGCCCAAGAGGGTTCATCAAGATGGCA +
Preference number: 6 (lower is better)
Translates to: EKLACGGTASWQ*EKGPRGFIKMA
Trigger: TGCCATCTTGATGAACCCTCTTGGGCCTTTCTCCAATTGCCACGAGGCGGTGCCCCCGCAGGCCAGCTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp GAGGTCCAGGTCTTGCCTGCCGGGATGAGAGCACCCTGGGCGTCTTaGCAGTCACACTCAGCCCTGAGCACACACTTGTCACTGTTCAGC +
Preference number: 6 (lower is better)
Translates to: EVQVLPAGMRAPWAS*QSHSALSTHLSLFS
Trigger: GCTGAACAGTGACAAGTGTGTGCTCAGGGCTGAGTGTGACTGCAAAGACGCCCAGGGTGCTCTCATCCCGGCAGGCAAGACCTGGACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp CCGGCATCCTGGCAGGTGGCCGTCATGGCTGACATGTaGGCACAGAGCTTCTGCTGGAGACCTTGGAAGCTA +
Preference number: 6 (lower is better)
Translates to: PASWQVAVMADM*AQSFCWRPWKL
Trigger: TAGCTTCCAAGGTCTCCAGCAGAAGCTCTGTGCTCACATGTCAGCCATGACGGCCACCTGCCAGGATGCCGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp GCTGTTGCCGTCCTCCAGGTCCTGGCAGTAAGCCTCTaGGGGACACTTGAAATTCTGGCACTGGATGGCCCC +
Preference number: 6 (lower is better)
Translates to: AVAVLQVLAVSL*GTLEILALDGP
Trigger: GGGGCCATCCAGTGCCAGAATTTCAAGTGTCCCTCAGAGGCTTACTGCCAGGACCTGGAGGACGGCAACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp CCCTCACAGTGGCCTTCTGAGTCCAAGCAGGAAGGCTaGCAGGGTGGAAGGCAGTTGGTGAAGTGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: PSQWPSESKQEG*QGGRQLVKWLW
Trigger: CCACAGCCACTTCACCAACTGCCTTCCACCCTGTCAGCCTTCCTGCTTGGACTCAGAAGGCCACTGTGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp TACAGCCTTTGGAGGTCCAGGTCTTGCCTGCCGGAATaGTGGCACCCCGGGCATCTTTACAGCCGCACTGTG +
Preference number: 6 (lower is better)
Translates to: YSLWRSRSCLPE*WHPGHLYSRTV
Trigger: CACAGTGCGGCTGTAAAGATGCCCGGGGTGCCATCATTCCGGCAGGCAAGACCTGGACCTCCAAAGGCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GGAAGGCAGTTGGTGAAGCTGCTGTGGGCGGGGCACTaGAGAGTGATATTGGCACAGTTGCTGGTGCCATCC +
Preference number: 6 (lower is better)
Translates to: GRQLVKLLWAGH*RVILAQLLVPS
Trigger: GGATGGCACCAGCAACTGTGCCAATATCACTCTGCAGTGCCCCGCCCACAGCAGCTTCACCAACTGCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp AGTGGATGGCTCCTGCTGAGCAGGTACAGGACTGGGTaGAGCCCCTGGAGATCCACGTCTTGTCTGCTGAGA +
Preference number: 6 (lower is better)
Translates to: SGWLLLSRYRTG*SPWRSTSCLLR
Trigger: TCTCAGCAGACAAGACGTGGATCTCCAGGGGCTGCACCCAGTCCTGTACCTGCTCAGCAGGAGCCATCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GACACTGGAAACTCAGGCACTGGATGCTTCCTCCTGTaGAGACACAGCTCTGGGTGCAGCCTCTGGAGACCC +
Preference number: 6 (lower is better)
Translates to: DTGNSGTGCFLL*RHSSGCSLWRP
Trigger: GGGTCTCCAGAGGCTGCACCCAGAGCTGTGTCTGCACAGGAGGAAGCATCCAGTGCCTGAGTTTCCAGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GCACACACTTGTCCCTATCGAGCACAAAGCCAGGGTTaGAGAGGCAGCCTTCCCTGCAAGTGGAGGGGACTC +
Preference number: 6 (lower is better)
Translates to: AHTCPYRAQSQG*RGSLPCKWRGL
Trigger: GAGTCCCCTCCACTTGCAGGGAAGGCTGCCTCTGCAACCCTGGCTTTGTGCTCGATAGGGACAAGTGTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GCTCTGGGTACAGTCCTTGGAGGTCCAGGTCTTGCCTaGCGGAACAAGGCCACCCTCAGCATCTTTGCAGTC +
Preference number: 6 (lower is better)
Translates to: ALGTVLGGPGLA*RNKATLSIFAV
Trigger: GACTGCAAAGATGCTGAGGGTGGCCTTGTTCCGGCAGGCAAGACCTGGACCTCCAAGGACTGTACCCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp CTGCTCAAAGGGCTCTGGGGCTATGATCTGGTGACATaGAGCAAAGGGTCCCTGGGGGTCCACAAGCACCCT +
Preference number: 6 (lower is better)
Translates to: LLKGLWGYDLVT*SKGSLGVHKHP
Trigger: AGGGTGCTTGTGGACCCCCAGGGACCCTTTGCTGCATGTCACCAGATCATAGCCCCAGAGCCCTTTGAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GGTGGTCTCTTCAGGAGGGGTAGTGGTCACTTCTGTTaGGGTGGTGGTCTCCTCAGGAGGAATGCTGGCAGG +
Preference number: 6 (lower is better)
Translates to: GGLFRRGSGHFC*GGGLLRRNAGR
Trigger: CCTGCCAGCATTCCTCCTGAGGAGACCACCACCCCAACAGAAGTGACCACTACCCCTCCTGAAGAGACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp TCCAGGGCTTCACAGGATAGCCGGCATCCTGGCAGGTaGCCGTCATGGCTGACATGTGAGCACAGAGCTTCT +
Preference number: 6 (lower is better)
Translates to: SRASQDSRHPGR*PSWLTCEHRAS
Trigger: AGAAGCTCTGTGCTCACATGTCAGCCATGACGGCCACCTGCCAGGATGCCGGCTATCCTGTGAAGCCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GCAGGAGTTGGCACATGGGTTGTAGCTGCTCCTAGGTaGGCACCTCATAGGGCAGAAGGTGCTGTTGCGCCA +
Preference number: 6 (lower is better)
Translates to: AGVGTWVVAAPR*APHRAEGAVAP
Trigger: TGGCGCAACAGCACCTTCTGCCCTATGAGGTGCCCACCTAGGAGCAGCTACAACCCATGTGCCAACTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp TGTCTGAGGGGCACACAGGTGGTTCCACTCAGGATGTaGCCACTCTGGCATTCACAGCCCTCTACACAGGGC +
Preference number: 6 (lower is better)
Translates to: CLRGTQVVPLRM*PLWHSQPSTQG
Trigger: GCCCTGTGTAGAGGGCTGTGAATGCCAGAGTGGCCACATCCTGAGTGGAACCACCTGTGTGCCCCTCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp AGGTCCCTGAGGGACACTGGAAGTCCCTGCAGTGGATaGTCCCTGTCACACAGGCACAGGTTTGTGTGCAGC +
Preference number: 6 (lower is better)
Translates to: RSLRDTGSPCSG*SLSHRHRFVCS
Trigger: GCTGCACACAAACCTGTGCCTGTGTGACAGGGACCATCCACTGCAGGGACTTCCAGTGTCCCTCAGGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp TGGCACTGGATATTGCCTTCCACGCAGGCACAGCTCTaGGTACAGCCTTTGGAGGTCCAGGTCTTGCCTGCC +
Preference number: 6 (lower is better)
Translates to: WHWILPSTQAQL*VQPLEVQVLPA
Trigger: GGCAGGCAAGACCTGGACCTCCAAAGGCTGTACCCAGAGCTGTGCCTGCGTGGAAGGCAATATCCAGTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CTGGGTGCAGCCTCTGGAGACCCAGGTCTTGTCTTCTaGGATGAGCGCACCGTGAGCATCTTTGCAGCCACA +
Preference number: 6 (lower is better)
Translates to: LGAASGDPGLVF*DERTVSIFAAT
Trigger: TGTGGCTGCAAAGATGCTCACGGTGCGCTCATCCCAGAAGACAAGACCTGGGTCTCCAGAGGCTGCACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp TGGCACTGGATGACTCCATCCGTGCAGGCACAGCTCTaGGTACAGTCACTGGAGATCCAGGTGTTGCCTGCC +
Preference number: 6 (lower is better)
Translates to: WHWMTPSVQAQL*VQSLEIQVLPA
Trigger: GGCAGGCAACACCTGGATCTCCAGTGACTGTACCCAGAGCTGTGCCTGCACGGATGGAGTCATCCAGTGCCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CCGGGCAGGGTGTCATGCAGCGCTGGTACACAGTATTaGCAGGACATGTCATGGCACAGTGTGTGTGGTCCC +
Preference number: 6 (lower is better)
Translates to: PGRVSCSAGTQY*QDMSWHSVCGP
Trigger: GGGACCACACACACTGTGCCATGACATGTCCTGCCAATACTGTGTACCAGCGCTGCATGACACCCTGCCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GCACAGCTCTGGGTACAGCCTTTGGAGGTCCAGGTCTaGCCTGCCGGAATGATGGCACCCCGGGCATCTTTA +
Preference number: 6 (lower is better)
Translates to: AQLWVQPLEVQV*PAGMMAPRASL
Trigger: TAAAGATGCCCGGGGTGCCATCATTCCGGCAGGCAAGACCTGGACCTCCAAAGGCTGTACCCAGAGCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GTCTTGCCTGCCGGGATGAGAGCACCCTGGGCGTCTTaGCAGTCACACTCAGCCCTGAGCACACACTTGTCA +
Preference number: 6 (lower is better)
Translates to: VLPAGMRAPWAS*QSHSALSTHLS
Trigger: TGACAAGTGTGTGCTCAGGGCTGAGTGTGACTGCAAAGACGCCCAGGGTGCTCTCATCCCGGCAGGCAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GCACAGCTCTGGGTACAGTCCTTGGAGGTCCAGGTCTaGCCTGCCGGAACAAGGCCACCCTCAGCATCTTTG +
Preference number: 6 (lower is better)
Translates to: AQLWVQSLEVQV*PAGTRPPSASL
Trigger: CAAAGATGCTGAGGGTGGCCTTGTTCCGGCAGGCAAGACCTGGACCTCCAAGGACTGTACCCAGAGCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GCCGGGCAGGGTGTCATGCAGCGCTGGTACACAGTATaGGCAGGACATGTCATGGCACAGTGTGTGTGGTCC +
Preference number: 6 (lower is better)
Translates to: AGQGVMQRWYTV*AGHVMAQCVWS
Trigger: GGACCACACACACTGTGCCATGACATGTCCTGCCAATACTGTGTACCAGCGCTGCATGACACCCTGCCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp AGACAAGGGCTGTCCTGGAAGCAGCCTCGAGTAAAGTaGGCCACCATGCAGGACTCCCCAGCTCTGCAGCCA +
Preference number: 6 (lower is better)
Translates to: RQGLSWKQPRVK*ATMQDSPALQP
Trigger: TGGCTGCAGAGCTGGGGAGTCCTGCATGGTGGCCAACTTTACTCGAGGCTGCTTCCAGGACAGCCCTTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp ACGCAGCCCTCCTTGCAGGTGGAGGGAACTTTAGGACTGATATCTTaGCAGAGGCCCTCTGGGTCCAAGCAGGAAGGCAGGCAGGAGGGA +
Preference number: 6 (lower is better)
Translates to: TQPSLQVEGTLGLIS*QRPSGSKQEGRQEG
Trigger: TCCCTCCTGCCTGCCTTCCTGCTTGGACCCAGAGGGCCTCTGCAAAGATATCAGTCCTAAAGTTCCCTCCACCTGCAAGGAGGGCTGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000117564.8
ENSMUST00000150470.2
ENSMUST00000164178.2
CDS CAA 90 bp GGCCATCCAGATCAGTACAGGAACGTGAACATGCGGGGAGGCAGTTaGTGTAGTGGCTGTGGGCGGGACACTGCAGAGGGATTTTGGCAC +
Preference number: 6 (lower is better)
Translates to: GHPDQYRNVNMRGGS*CSGCGRDTAEGFWH
Trigger: GTGCCAAAATCCCTCTGCAGTGTCCCGCCCACAGCCACTACACAAACTGCCTCCCCGCATGTTCACGTTCCTGTACTGATCTGGATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp CCTCCAGGTCCTGGCAGTAAGCCTCTGAGGGACACTTaGAATTCTGGCACTGGATGGCCCCTCCCATGCAAG +
Preference number: 6 (lower is better)
Translates to: PPGPGSKPLRDT*NSGTGWPLPCK
Trigger: CTTGCATGGGAGGGGCCATCCAGTGCCAGAATTTCAAGTGTCCCTCAGAGGCTTACTGCCAGGACCTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp CCAACATACAGCGCTGCTCAAAGGGCTCTGGGGCTATaGTCTGGTGACATGCAGCAAAGGGTCCCTGGGGGT +
Preference number: 6 (lower is better)
Translates to: PTYSAAQRALGL*SGDMQQRVPGG
Trigger: ACCCCCAGGGACCCTTTGCTGCATGTCACCAGATCATAGCCCCAGAGCCCTTTGAGCAGCGCTGTATGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp CCTTGCAGTAGGTCCCTGAGGGACACTGGAAGTCCCTaGAGTGGATGGTCCCTGTCACACAGGCACAGGTTT +
Preference number: 6 (lower is better)
Translates to: PCSRSLRDTGSP*SGWSLSHRHRF
Trigger: AAACCTGTGCCTGTGTGACAGGGACCATCCACTGCAGGGACTTCCAGTGTCCCTCAGGGACCTACTGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GGCAGGCAGCTGGTGAAGTTGCTGTTGGCTGGGCACTaGAGAGAGATTCTGGTGCAGTTACTGTTGCCGTCC +
Preference number: 6 (lower is better)
Translates to: GRQLVKLLLAGH*REILVQLLLPS
Trigger: GGACGGCAACAGTAACTGCACCAGAATCTCTCTGCAGTGCCCAGCCAACAGCAACTTCACCAGCTGCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GACACTGGAAATTCTGGCACTGAACAGCCCCTCCTGTaGAGGCACAGCTCTGGGTACAGTCCTTGGAGGTCC +
Preference number: 6 (lower is better)
Translates to: DTGNSGTEQPLL*RHSSGYSPWRS
Trigger: GGACCTCCAAGGACTGTACCCAGAGCTGTGCCTGCACAGGAGGGGCTGTTCAGTGCCAGAATTTCCAGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GCTCTTAGTACAGTCACTGGAGATCCAGGTCCTACCTaGGGGAATGAGGCCACCTTGGGTGTCCTTGCAGCC +
Preference number: 6 (lower is better)
Translates to: ALSTVTGDPGPT*GNEATLGVLAA
Trigger: GGCTGCAAGGACACCCAAGGTGGCCTCATTCCCGCAGGTAGGACCTGGATCTCCAGTGACTGTACTAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp TCTCACAGCGGTCATTCACGTTGGAGCAGGATGGGATaGAGGAGGGTAGGCAGTAGGTGTGATGGCTGTGGG +
Preference number: 6 (lower is better)
Translates to: SHSGHSRWSRMG*RRVGSRCDGCG
Trigger: CCCACAGCCATCACACCTACTGCCTACCCTCCTGCATCCCATCCTGCTCCAACGTGAATGACCGCTGTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GGAAGGCAGCTGGTGTACTGGGTGTGGGCCGGGCACTaGAGAGTGATTTTGGTGCAAGTACTGCTGCCTTCA +
Preference number: 6 (lower is better)
Translates to: GRQLVYWVWAGH*RVILVQVLLPS
Trigger: TGAAGGCAGCAGTACTTGCACCAAAATCACTCTCCAGTGCCCGGCCCACACCCAGTACACCAGCTGCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GGCACACACTTGTCCTTACTGAACACAAAGCCCGAGTaGCAGAGGCAGCCTTCGATGCAGGTAGAGGGCCTC +
Preference number: 6 (lower is better)
Translates to: GTHLSLLNTKPE*QRQPSMQVEGL
Trigger: GAGGCCCTCTACCTGCATCGAAGGCTGCCTCTGCCACTCGGGCTTTGTGTTCAGTAAGGACAAGTGTGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp ATAGATGCCATCGGCGGTGCAGCCGCAGTGTGTCACTaGGAGGCTCTGTGTGTCACTGTAAATGTAGCCGGG +
Preference number: 6 (lower is better)
Translates to: IDAIGGAAAVCH*EALCVTVNVAG
Trigger: CCCGGCTACATTTACAGTGACACACAGAGCCTCCCAGTGACACACTGCGGCTGCACCGCCGATGGCATCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GGGCCCAGGCAGGACCCTGAAGGGCAGTTTGGCAGTTaGCCTGGGCTTTCTCAAAGTCAATGGGCCTGCATT +
Preference number: 6 (lower is better)
Translates to: GPRQDPEGQFGS*PGLSQSQWACI
Trigger: AATGCAGGCCCATTGACTTTGAGAAAGCCCAGGCAAACTGCCAAACTGCCCTTCAGGGTCCTGCCTGGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GTGAAGCTGCTGTGGGCGGGGCACTGCAGAGTGATATaGGCACAGTTGCTGGTGCCATCCTCAATGTCCTGG +
Preference number: 6 (lower is better)
Translates to: VKLLWAGHCRVI*AQLLVPSSMSW
Trigger: CCAGGACATTGAGGATGGCACCAGCAACTGTGCCAATATCACTCTGCAGTGCCCCGCCCACAGCAGCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp CCTCCCATGCAAGAACAGCTCTGGGTGCAGCCCCTGTaGATCCAAGTCTTACCTGCCGGGATGAGAACACCC +
Preference number: 6 (lower is better)
Translates to: PPMQEQLWVQPL*IQVLPAGMRTP
Trigger: GGGTGTTCTCATCCCGGCAGGTAAGACTTGGATCAACAGGGGCTGCACCCAGAGCTGTTCTTGCATGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GCCGGGCACTGCACAGTGATTTCAACACAGTTACTGTaGCCGTCCTCGATGTCCTGGCACTCGGCTCCTGAG +
Preference number: 6 (lower is better)
Translates to: AGHCTVISTQLL*PSSMSWHSAPE
Trigger: CTCAGGAGCCGAGTGCCAGGACATCGAGGACGGCAACAGTAACTGTGTTGAAATCACTGTGCAGTGCCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp TACCCACTCACCGGGATGAGAGCACCCTGGGCGTCTTaGCAGTCACACTCAGCCCTGAGCACACACTTGTCA +
Preference number: 6 (lower is better)
Translates to: YPLTGMRAPWAS*QSHSALSTHLS
Trigger: TGACAAGTGTGTGCTCAGGGCTGAGTGTGACTGCAAAGACGCCCAGGGTGCTCTCATCCCGGTGAGTGGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150470.2
CDS CAA 90 bp TACCCGGGAGGAACAATGGGCCCAGGCAGGACCCTGAAGGGCAGTTaGGCAGTTTGCCTGGGCTTTCTCAAAGTCAATGGGCCTGCATTT +
Preference number: 6 (lower is better)
Translates to: YPGGTMGPGRTLKGS*AVCLGFLKVNGPAF
Trigger: AAATGCAGGCCCATTGACTTTGAGAAAGCCCAGGCAAACTGCCAAACTGCCCTTCAGGGTCCTGCCTGGGCCCATTGTTCCTCCCGGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp GGCTGTCTGGATCCAAGCAGGAAGGTGGACAGGAGGGAAGGCAGTTaGTATAGTGACTGTGAGCTGGACACTCCAGAGGGCAGAAGCTGC +
Preference number: 6 (lower is better)
Translates to: GCLDPSRKVDRREGS*YSDCELDTPEGRSC
Trigger: GCAGCTTCTGCCCTCTGGAGTGTCCAGCTCACAGTCACTATACAAACTGCCTTCCCTCCTGTCCACCTTCCTGCTTGGATCCAGACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp ATGAGATCTGAGCACACACTTGTCGTTAAGCAGCACATAGTCAGGTaGGCAGATGCAGCCCTCCCTGCAGGTGGCGGGGACTTTGTGGCC +
Preference number: 6 (lower is better)
Translates to: MRSEHTLVVKQHIVR*ADAALPAGGGDFVA
Trigger: GGCCACAAAGTCCCCGCCACCTGCAGGGAGGGCTGCATCTGCCAACCTGACTATGTGCTGCTTAACGACAAGTGTGTGCTCAGATCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp TCACTCTTCAGCTGGCATACCGTATGCGTCCCACACTaGGAGATCTGGCACTCCATCAGGCTACCCGGCAAG +
Preference number: 6 (lower is better)
Translates to: SLFSWHTVCVPH*EIWHSIRLPGK
Trigger: CTTGCCGGGTAGCCTGATGGAGTGCCAGATCTCTCAGTGTGGGACGCATACGGTATGCCAGCTGAAGAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp TGGCACTGGATGGCCCCTCCCTTGCAGGTGCAGCTCTaGGTACAGCCTCTGTTGATCCAGGTCTTATCTGCA +
Preference number: 6 (lower is better)
Translates to: WHWMAPPLQVQL*VQPLLIQVLSA
Trigger: TGCAGATAAGACCTGGATCAACAGAGGCTGTACTCAGAGCTGCACCTGCAAGGGAGGGGCCATCCAGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp CTGGGTGCAGCCCCTGGAGATCCACGTCTTGTCTGCTaGGATGAAAGCACCCTGGGTGTTTTTGCAGCCACA +
Preference number: 6 (lower is better)
Translates to: LGAAPGDPRLVC*DESTLGVFAAT
Trigger: TGTGGCTGCAAAAACACCCAGGGTGCTTTCATCTCAGCAGACAAGACGTGGATCTCCAGGGGCTGCACCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp GGGACACTTGAAATTTCTGCAGTGGATGGCTCCTGCTaGGCAGGTACAGGACTGGGTGCAGCCCCTGGAGAT +
Preference number: 6 (lower is better)
Translates to: GTLEISAVDGSC*AGTGLGAAPGD
Trigger: ATCTCCAGGGGCTGCACCCAGTCCTGTACCTGCTCAGCAGGAGCCATCCACTGCAGAAATTTCAAGTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp TGCAGCCTCTGGAGACCCAGGTCTTGTCTTCTGGGATaGGCGCACCGTGAGCATCTTTGCAGCCACAACGAT +
Preference number: 6 (lower is better)
Translates to: CSLWRPRSCLLG*AHREHLCSHND
Trigger: ATCGTTGTGGCTGCAAAGATGCTCACGGTGCGCTCATCCCAGAAGACAAGACCTGGGTCTCCAGAGGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp TACAGTCACTGGAGATCCAGGTCCTACCTGCGGGAATaGGGCCACCTTGGGTGTCCTTGCAGCCACACTGAA +
Preference number: 6 (lower is better)
Translates to: YSHWRSRSYLRE*GHLGCPCSHTE
Trigger: TTCAGTGTGGCTGCAAGGACACCCAAGGTGGCCTCATTCCCGCAGGTAGGACCTGGATCTCCAGTGACTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp CCCCTCACAGTGGCCATCCAGATCAGTACAGGAACGTaGACATGCGGGGAGGCAGTTTGTGTAGTGGCTGTG +
Preference number: 6 (lower is better)
Translates to: PLTVAIQISTGT*TCGEAVCVVAV
Trigger: CACAGCCACTACACAAACTGCCTCCCCGCATGTTCACGTTCCTGTACTGATCTGGATGGCCACTGTGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp TACATCCCCTGGAGACCCATGTCTTGCTTTCCGGGATaGGAACGCCATGGGCGTCTTTGCAGCCACACTCAC +
Preference number: 6 (lower is better)
Translates to: YIPWRPMSCFPG*ERHGRLCSHTH
Trigger: GTGAGTGTGGCTGCAAAGACGCCCATGGCGTTCTCATCCCGGAAAGCAAGACATGGGTCTCCAGGGGATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp GGGACCCTGATGGGCAGACAAAATTCTGGCACTGGATaGCTCCATCCGTGCAGGCACAGCTCTGGGTACAGT +
Preference number: 6 (lower is better)
Translates to: GTLMGRQNSGTG*LHPCRHSSGYS
Trigger: ACTGTACCCAGAGCTGTGCCTGCACGGATGGAGTCATCCAGTGCCAGAATTTTGTCTGCCCATCAGGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp TCACACTTGGAGAGAATGGAATCCTCCCTCGAAGTGTaGACCATCGGCCCCAGGTCTGGAGAGTTCGGTCTC +
Preference number: 6 (lower is better)
Translates to: SHLERMESSLEV*TIGPRSGEFGL
Trigger: GAGACCGAACTCTCCAGACCTGGGGCCGATGGTGCACACTTCGAGGGAGGATTCCATTCTCTCCAAGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp CCAGGGTTAGAGAAGTCTTCAGCAGGCCCCACACCCTaGTTCCCTGTTGGTCCCTTCTTCTGGGTCCACTTA +
Preference number: 6 (lower is better)
Translates to: PGLEKSSAGPTP*FPVGPFFWVHL
Trigger: TAAGTGGACCCAGAAGAAGGGACCAACAGGGAAGCAGGGTGTGGGGCCTGCTGAAGACTTCTCTAACCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GGCCCAGGCAGGACCCTGAAGGGCAGTTTGGCAGTTTaGCTGGGCTTTCTCAAAGTCAATGGGCCTGCATTT +
Preference number: 6 (lower is better)
Translates to: GPGRTLKGSLAV*LGFLKVNGPAF
Trigger: AAATGCAGGCCCATTGACTTTGAGAAAGCCCAGGCAAACTGCCAAACTGCCCTTCAGGGTCCTGCCTGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp CGGGACACTGCAGAGGGATTTTGGCACAGGTTCTGCTaGTATCGTTGCTCTCCTTGCAGTAAGTCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: RDTAEGFWHRFC*YRCSPCSKSLG
Trigger: CCCCAGGGACTTACTGCAAGGAGAGCAACGATAGCAGCAGAACCTGTGCCAAAATCCCTCTGCAGTGTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp ACCCTACAGGCCTGGGTGCTGCTGATAAGCGCAGTCTaGTCTTGGCTGCATTCTGATTGGAGAAGGTCAGGC +
Preference number: 6 (lower is better)
Translates to: TLQAWVLLISAV*SWLHSDWRRSG
Trigger: GCCTGACCTTCTCCAATCAGAATGCAGCCAAGAGCAGACTGCGCTTATCAGCAGCACCCAGGCCTGTAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp TGTAGTGGCTGTGGGCGGGACACTGCAGAGGGATTTTaGCACAGGTTCTGCTGCTATCGTTGCTCTCCTTGC +
Preference number: 6 (lower is better)
Translates to: CSGCGRDTAEGF*HRFCCYRCSPC
Trigger: GCAAGGAGAGCAACGATAGCAGCAGAACCTGTGCCAAAATCCCTCTGCAGTGTCCCGCCCACAGCCACTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GAGACCCATGTCTTGCTTTCCGGGATGAGAACGCCATaGGCGTCTTTGCAGCCACACTCACTGCTAGGCACA +
Preference number: 6 (lower is better)
Translates to: ETHVLLSGMRTP*ASLQPHSLLGT
Trigger: TGTGCCTAGCAGTGAGTGTGGCTGCAAAGACGCCCATGGCGTTCTCATCCCGGAAAGCAAGACATGGGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GCACAGTCACTGCTGCCATCCTCGTTGTACTGGCAGTaGGACCCTGATGGGCAGACAAAATTCTGGCACTGG +
Preference number: 6 (lower is better)
Translates to: AQSLLPSSLYWQ*DPDGQTKFWHW
Trigger: CCAGTGCCAGAATTTTGTCTGCCCATCAGGGTCCCACTGCCAGTACAACGAGGATGGCAGCAGTGACTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CAGGCCTGGGTGCTGCTGATAAGCGCAGTCTGCTCTTaGCTGCATTCTGATTGGAGAAGGTCAGGCTCTTCG +
Preference number: 6 (lower is better)
Translates to: QAWVLLISAVCS*LHSDWRRSGSS
Trigger: CGAAGAGCCTGACCTTCTCCAATCAGAATGCAGCCAAGAGCAGACTGCGCTTATCAGCAGCACCCAGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CACAGCAGGATCCCCTGGCTTGCACAGGTACAGTGCTaGGAGCAGTCGTTAGTTACAAAGCTGTCACCCAGC +
Preference number: 6 (lower is better)
Translates to: HSRIPWLAQVQC*EQSLVTKLSPS
Trigger: GCTGGGTGACAGCTTTGTAACTAACGACTGCTCCCAGCACTGTACCTGTGCAAGCCAGGGGATCCTGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GAACATGTGGAAAGCAAAATGGACGCAAAGGGGGCCTaGCTCCCATATGTCAGGGCTACGCAGGCGTGCCAC +
Preference number: 6 (lower is better)
Translates to: EHVESKMDAKGA*LPYVRATQACH
Trigger: GTGGCACGCCTGCGTAGCCCTGACATATGGGAGCAAGGCCCCCTTTGCGTCCATTTTGCTTTCCACATGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GGAACAATGGGCCCAGGCAGGACCCTGAAGGGCAGTTaGGCAGTTTGCCTGGGCTTTCTCAAAGTCAATGGG +
Preference number: 6 (lower is better)
Translates to: GTMGPGRTLKGS*AVCLGFLKVNG
Trigger: CCCATTGACTTTGAGAAAGCCCAGGCAAACTGCCAAACTGCCCTTCAGGGTCCTGCCTGGGCCCATTGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp AGAGGGCAGAAGCTGCTGTTCCTCCAGATAGGTGGCTaGAGCCCCTGGTTCTGGCAGGCATCTTCAAAGGAC +
Preference number: 6 (lower is better)
Translates to: RGQKLLFLQIGG*SPWFWQASSKD
Trigger: GTCCTTTGAAGATGCCTGCCAGAACCAGGGGCTCAAGCCACCTATCTGGAGGAACAGCAGCTTCTGCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GAGCACACACTTGTCGTTGCGCAGCACATAGCCAGGTaGACACACGCAGCCCTCTTTGCAGTTAGAGTGGGC +
Preference number: 6 (lower is better)
Translates to: EHTLVVAQHIAR*THAALFAVRVG
Trigger: GCCCACTCTAACTGCAAAGAGGGCTGCGTGTGTCAACCTGGCTATGTGCTGCGCAACGACAAGTGTGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GTCTCTGGGGGACACTGGAAATTCTGGCACTGGATATaGCCTTCCACGCAGGCACAGCTCTGGGTACAGCCT +
Preference number: 6 (lower is better)
Translates to: VSGGHWKFWHWI*PSTQAQLWVQP
Trigger: AGGCTGTACCCAGAGCTGTGCCTGCGTGGAAGGCAATATCCAGTGCCAGAATTTCCAGTGTCCCCCAGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp ATACAGCCCTTCTTGCAGACCGAGGGGGCTTTGAAGTaGGATTCCACGCAGCTGCCATCCAGGTTGGAGCAG +
Preference number: 6 (lower is better)
Translates to: IQPFLQTEGALK*DSTQLPSRLEQ
Trigger: CTGCTCCAACCTGGATGGCAGCTGCGTGGAATCCAACTTCAAAGCCCCCTCGGTCTGCAAGAAGGGCTGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GAGCACACACTTGTGATTATGCACCACATAGCCAGGTaGACAGAGGCAGCCCTCCTTGCAGGGAGACGGGAC +
Preference number: 6 (lower is better)
Translates to: EHTLVIMHHIAR*TEAALLAGRRD
Trigger: GTCCCGTCTCCCTGCAAGGAGGGCTGCCTCTGTCAACCTGGCTATGTGGTGCATAATCACAAGTGTGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GCTCTTCGTCTCTTTCCTCTTCTTCTGGTAGGGCCCTaGGGAAGCGGAAGAAGGCATGCTGCGCCTTCACCT +
Preference number: 6 (lower is better)
Translates to: ALRLFPLLLVGP*GSGRRHAAPSP
Trigger: AGGTGAAGGCGCAGCATGCCTTCTTCCGCTTCCCAAGGGCCCTACCAGAAGAAGAGGAAAGAGACGAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp ACACAACTGGAGAAGCTGGCCTGCGGGGGCACCGCCTCGTGGCAATaGGAGAAAGGCCCAAGAGGGTTCATCAAGATGGCACATTTCTTA +
Preference number: 6 (lower is better)
Translates to: TQLEKLACGGTASWQ*EKGPRGFIKMAHFL
Trigger: TAAGAAATGTGCCATCTTGATGAACCCTCTTGGGCCTTTCTCCAATTGCCACGAGGCGGTGCCCCCGCAGGCCAGCTTCTCCAGTTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp GGAAGTCCAGCTCTTGCCTGCAGGGATGAAACCACCCTGGGTATGTaGGCAGCCACACTCAATTCTGAGCACACACTTGTCGTTGCGCAG +
Preference number: 6 (lower is better)
Translates to: GSPALACRDETTLGM*AATLNSEHTLVVAQ
Trigger: CTGCGCAACGACAAGTGTGTGCTCAGAATTGAGTGTGGCTGCCAACATACCCAGGGTGGTTTCATCCCTGCAGGCAAGAGCTGGACTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp CAGTGGATGGTCCCTGTCACACAGGCACAGGTTTGTGTGCAGCCTTaGTTGATCCAGATCTTGTCTGCAGGGATGAGGACACCCTGGGCA +
Preference number: 6 (lower is better)
Translates to: QWMVPVTQAQVCVQP*LIQILSAGMRTPWA
Trigger: TGCCCAGGGTGTCCTCATCCCTGCAGACAAGATCTGGATCAACAAAGGCTGCACACAAACCTGTGCCTGTGTGACAGGGACCATCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp TGTGTTCTGGGCACACATTTGTCCTCACTGAACACAAAGCCATGGTaGCAAAGACATCCCTCCCTGCAGCTGGAGGGGACGCTTGGGCTG +
Preference number: 6 (lower is better)
Translates to: CVLGTHLSSLNTKPW*QRHPSLQLEGTLGL
Trigger: CAGCCCAAGCGTCCCCTCCAGCTGCAGGGAGGGATGTCTTTGCAACCATGGCTTTGTGTTCAGTGAGGACAAATGTGTGCCCAGAACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp TGCGGAGGGATTCTGGCACAGTTACTGCTGCCATCTTCATTGTCCTaGCAGTATGCCCCAGGGGGACACTGGAAACTCAGGCACTGGATG +
Preference number: 6 (lower is better)
Translates to: CGGILAQLLLPSSLS*QYAPGGHWKLRHWM
Trigger: CATCCAGTGCCTGAGTTTCCAGTGTCCCCCTGGGGCATACTGCAAGGACAATGAAGATGGCAGCAGTAACTGTGCCAGAATCCCTCCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp ACAGTCACTGGAGATCCAGGTCCTACCTGCGGGAATGAGGCCACCTaGGGTGTCCTTGCAGCCACACTGAATTCGGAGCACACACTTATC +
Preference number: 6 (lower is better)
Translates to: TVTGDPGPTCGNEAT*GVLAATLNSEHTLI
Trigger: GATAAGTGTGTGCTCCGAATTCAGTGTGGCTGCAAGGACACCCAAGGTGGCCTCATTCCCGCAGGTAGGACCTGGATCTCCAGTGACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp CACAGAAGCTGTTCATACACTTCAGCAAGAAGGGCTTaGTGGGTACCCGGGAGGAACAATGGGCCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: HRSCSYTSARRA*WVPGRNNGPRQ
Trigger: CTGCCTGGGCCCATTGTTCCTCCCGGGTACCCATCAAGCCCTTCTTGCTGAAGTGTATGAACAGCTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp AAGTCCCCGAGGGACACTGGAAATTCTGGCATCGAATaGCCCCTTCCATGCAGTCACAGCTCTGGGAACAGC +
Preference number: 6 (lower is better)
Translates to: KSPRDTGNSGIE*PLPCSHSSGNS
Trigger: GCTGTTCCCAGAGCTGTGACTGCATGGAAGGGGTCATTCGATGCCAGAATTTCCAGTGTCCCTCGGGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp CCCTCACAGTGGACATCCGTATTAGAGCAGGAGGGCTaGCAAGAAGGCAGGCAGCTGGTGAAGTTGCTGTTG +
Preference number: 6 (lower is better)
Translates to: PSQWTSVLEQEG*QEGRQLVKLLL
Trigger: CAACAGCAACTTCACCAGCTGCCTGCCTTCTTGTCAGCCCTCCTGCTCTAATACGGATGTCCACTGTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp AGCCACACTGAGTTCTGGGCACACACTTGTCCTTACTaGACACAAAGCCCGAGTGGCAGAGGCAGCCTTCGA +
Preference number: 6 (lower is better)
Translates to: SHTEFWAHTCPY*TQSPSGRGSLR
Trigger: TCGAAGGCTGCCTCTGCCACTCGGGCTTTGTGTTCAGTAAGGACAAGTGTGTGCCCAGAACTCAGTGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp AACATGTGGAAAGCAAAATGGACGCAAAGGGGGCCTTaGTCCCATATGTCAGGGCTACGCAGGCGTGCCACT +
Preference number: 6 (lower is better)
Translates to: NMWKAKWTQRGP*SHMSGLRRRAT
Trigger: AGTGGCACGCCTGCGTAGCCCTGACATATGGGAGCAAGGCCCCCTTTGCGTCCATTTTGCTTTCCACATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp AGAAGGGATGCTGACAGGAGGAACAGTGGTCACTTCTaGAGGGATGGTGGTCTCTTCAGGAGGGGTAGTGGT +
Preference number: 6 (lower is better)
Translates to: RRDADRRNSGHF*RDGGLFRRGSG
Trigger: ACCACTACCCCTCCTGAAGAGACCACCATCCCTGCAGAAGTGACCACTGTTCCTCCTGTCAGCATCCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp AGCTCAGCCTCAGCTCCTCCTCATCGTGTGTCATCATaGCATCTGACTTCAGGTTGTCGTTGCTGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: SSASAPPHRVSS*HLTSGCRCCCP
Trigger: GGGACAGCAGCAACGACAACCTGAAGTCAGATGGCATGATGACACACGATGAGGAGGAGCTGAGGCTGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp ACAAAGATGCCACTCAACCTAATGGTCACCCGTCCTTaGGAAGGCCACACGGGTAGCACCACCCTTTGGTTG +
Preference number: 6 (lower is better)
Translates to: TKMPLNLMVTRP*EGHTGSTTLWL
Trigger: CAACCAAAGGGTGGTGCTACCCGTGTGGCCTTCGCAAGGACGGGTGACCATTAGGTTGAGTGGCATCTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GCTCTGAGTACAGCCTCTGTTGATCCAGGTCTTATCTaGAGGGATGAGGACACCCTGGGTGTCTTTGCAGCC +
Preference number: 6 (lower is better)
Translates to: ALSTASVDPGLI*RDEDTLGVFAA
Trigger: GGCTGCAAAGACACCCAGGGTGTCCTCATCCCTGCAGATAAGACCTGGATCAACAGAGGCTGTACTCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GCTCTGAGTACAGCCTCTGTTGATCCAGGTCTTATCTaGAGGGATGAGGACACCCTGGGCATCTTTGCAGCC +
Preference number: 6 (lower is better)
Translates to: ALSTASVDPGLI*RDEDTLGIFAA
Trigger: GGCTGCAAAGATGCCCAGGGTGTCCTCATCCCTGCAGATAAGACCTGGATCAACAGAGGCTGTACTCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp TCTCTGGGGGACACTGGAAATTCTGGCACTGGATATTaGCTTCCACGCAGGCACAGCTCTGGGTACAGCCTT +
Preference number: 6 (lower is better)
Translates to: SLGDTGNSGTGY*LPRRHSSGYSL
Trigger: AAGGCTGTACCCAGAGCTGTGCCTGCGTGGAAGGCAATATCCAGTGCCAGAATTTCCAGTGTCCCCCAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp CTGGACATTGCGGAGGGATTCTGGCACAGTTACTGCTaGCATCTTCATTGTCCTTGCAGTATGCCCCAGGGG +
Preference number: 6 (lower is better)
Translates to: LDIAEGFWHSYC*HLHCPCSMPQG
Trigger: CCCCTGGGGCATACTGCAAGGACAATGAAGATGGCAGCAGTAACTGTGCCAGAATCCCTCCGCAATGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp AGGAAGGGAGACAGAAGGGAAGGCAGTCGGTGTAGTTaGTGTGGGTGGGGCACTGCAGAGTTATTTTGGCAC +
Preference number: 6 (lower is better)
Translates to: RKGDRREGSRCS*CGWGTAELFWH
Trigger: GTGCCAAAATAACTCTGCAGTGCCCCACCCACAGCAACTACACCGACTGCCTTCCCTTCTGTCTCCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GCAGAGGGATTTTGGCACAGGTTCTGCTGCTATCGTTaGTCTCCTTGCAGTAAGTCCCTGGGGGACACTGGA +
Preference number: 6 (lower is better)
Translates to: AEGFWHRFCCYR*SPCSKSLGDTG
Trigger: TCCAGTGTCCCCCAGGGACTTACTGCAAGGAGAGCAACGATAGCAGCAGAACCTGTGCCAAAATCCCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp TCTTGCCTGCCGGGACAAAGCCACCCTGGGCGTCTTTaGAGCCACAGTGAATTTGGAGCACACACTTGTGAT +
Preference number: 6 (lower is better)
Translates to: SCLPGQSHPGRL*SHSEFGAHTCD
Trigger: ATCACAAGTGTGTGCTCCAAATTCACTGTGGCTGCAAAGACGCCCAGGGTGGCTTTGTCCCGGCAGGCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GCTCTGGGTACAGTCACTGGAGATCCAGGTGTTGCCTaGCGGGATGATGTTGCCCCTGATATCTTTACAGCC +
Preference number: 6 (lower is better)
Translates to: ALGTVTGDPGVA*RDDVAPDIFTA
Trigger: GGCTGTAAAGATATCAGGGGCAACATCATCCCGGCAGGCAACACCTGGATCTCCAGTGACTGTACCCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp TCACAAATTTGGCACAGGACGCCGGGCAGGGTGTCATaGAGCGCTGGTACACAGTATTGGCAGGACATGTCA +
Preference number: 6 (lower is better)
Translates to: SQIWHRTPGRVS*SAGTQYWQDMS
Trigger: TGACATGTCCTGCCAATACTGTGTACCAGCGCTGCATGACACCCTGCCCGGCGTCCTGTGCCAAATTTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp TCACACAGCAGGATCCCCTGGCTTGCACAGGTACAGTaGTGGGAGCAGTCGTTAGTTACAAAGCTGTCACCC +
Preference number: 6 (lower is better)
Translates to: SHSRIPWLAQVQ*WEQSLVTKLSP
Trigger: GGGTGACAGCTTTGTAACTAACGACTGCTCCCAGCACTGTACCTGTGCAAGCCAGGGGATCCTGCTGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CTTCCCCAGCTCCAGTGTCCCATGTCTCCATACACCTaGTTCCAGTCGCAGAAAGGATGGACTCTGTCTTCG +
Preference number: 6 (lower is better)
Translates to: LPQLQCPMSPYT*FQSQKGWTLSS
Trigger: CGAAGACAGAGTCCATCCTTTCTGCGACTGGAACCAGGTGTATGGAGACATGGGACACTGGAGCTGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CAGAGCTCTGAGACCCAACACGGTTCCACAGAGGAATaGGAAAACTACCCGCAGGACTTCCCAACAGGAGCT +
Preference number: 6 (lower is better)
Translates to: QSSETQHGSTEE*ENYPQDFPTGA
Trigger: AGCTCCTGTTGGGAAGTCCTGCGGGTAGTTTTCCCATTCCTCTGTGGAACCGTGTTGGGTCTCAGAGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GTCACACAGTTATCCAGGAAGGATGAGGCCTTCAGGTaGAGCAGGCATGCCTCAAAGGGTCCACTTGGGTTG +
Preference number: 6 (lower is better)
Translates to: VTQLSRKDEAFR*SRHASKGPLGL
Trigger: CAACCCAAGTGGACCCTTTGAGGCATGCCTGCTCCACCTGAAGGCCTCATCCTTCCTGGATAACTGTGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp TCTTCATTGTCCTTGCAGTATGCCCCAGGGGGACACTaGAAACTCAGGCACTGGATGCTTCCTCCTGTGCAG +
Preference number: 6 (lower is better)
Translates to: SSLSLQYAPGGH*KLRHWMLPPVQ
Trigger: CTGCACAGGAGGAAGCATCCAGTGCCTGAGTTTCCAGTGTCCCCCTGGGGCATACTGCAAGGACAATGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp TCTGCTGCTATCGTTGCTCTCCTTGCAGTAAGTCCCTaGGGGACACTGGAAATCCCTGCACTGGATGATGCC +
Preference number: 6 (lower is better)
Translates to: SAAIVALLAVSP*GTLEIPALDDA
Trigger: GGCATCATCCAGTGCAGGGATTTCCAGTGTCCCCCAGGGACTTACTGCAAGGAGAGCAACGATAGCAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp TTGGCTGCACAGTCACTGCTGCCATCCTCGTTGTACTaGCAGTGGGACCCTGATGGGCAGACAAAATTCTGG +
Preference number: 6 (lower is better)
Translates to: LAAQSLLPSSLY*QWDPDGQTKFW
Trigger: CCAGAATTTTGTCTGCCCATCAGGGTCCCACTGCCAGTACAACGAGGATGGCAGCAGTGACTGTGCAGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GGCACACATTTGTCCTCACTGAACACAAAGCCATGGTaGCAAAGACATCCCTCCCTGCAGCTGGAGGGGACG +
Preference number: 6 (lower is better)
Translates to: GTHLSSLNTKPW*QRHPSLQLEGT
Trigger: CGTCCCCTCCAGCTGCAGGGAGGGATGTCTTTGCAACCATGGCTTTGTGTTCAGTGAGGACAAATGTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GTGTACTGGGTGTGGGCCGGGCACTGGAGAGTGATTTaGGTGCAAGTACTGCTGCCTTCACTGTTGTCCTTG +
Preference number: 6 (lower is better)
Translates to: VYWVWAGHWRVI*VQVLLPSLLSL
Trigger: CAAGGACAACAGTGAAGGCAGCAGTACTTGCACCAAAATCACTCTCCAGTGCCCGGCCCACACCCAGTACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp ATGAGCACACCGTCCCCCATGGCTCCCTTATGGATTTaGGTGCAGTTGCTGCTGCCGTCACCACTGTCTTTG +
Preference number: 6 (lower is better)
Translates to: MSTPSPMAPLWI*VQLLLPSPLSL
Trigger: CAAAGACAGTGGTGACGGCAGCAGCAACTGCACCAAAATCCATAAGGGAGCCATGGGGGACGGTGTGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GTCTTGCTTTCCGGGATGAGAACGCCATGGGCGTCTTaGCAGCCACACTCACTGCTAGGCACACACTTGTCA +
Preference number: 6 (lower is better)
Translates to: VLLSGMRTPWAS*QPHSLLGTHLS
Trigger: TGACAAGTGTGTGCCTAGCAGTGAGTGTGGCTGCAAAGACGCCCATGGCGTTCTCATCCCGGAAAGCAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp CCACTGAGGATGAAGCCAGGGTCACACTCGCAGCCTTCCACACACTaGTCTGAGCAGTGCTGGGTAGTAGATATAGGATGGCAGGTTTCC +
Preference number: 6 (lower is better)
Translates to: PLRMKPGSHSQPSTH*SEQCWVVDIGWQVS
Trigger: GGAAACCTGCCATCCTATATCTACTACCCAGCACTGCTCAGACAAGTGTGTGGAAGGCTGCGAGTGTGACCCTGGCTTCATCCTCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp TGGATGGTCCCTGTCACACAGGCACAGGTTTGTGTGCAGCCTTTGTaGATCCAGATCTTGTCTGCAGGGATGAGGACACCCTGGGCATCT +
Preference number: 6 (lower is better)
Translates to: WMVPVTQAQVCVQPL*IQILSAGMRTPWAS
Trigger: AGATGCCCAGGGTGTCCTCATCCCTGCAGACAAGATCTGGATCAACAAAGGCTGCACACAAACCTGTGCCTGTGTGACAGGGACCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp CTGGAAGTCCCTGCAGTGGATGGTCCCTGTCACACAGGCACAGGTTaGTGTGCAGCCTTTGTTGATCCAGATCTTGTCTGCAGGGATGAG +
Preference number: 6 (lower is better)
Translates to: LEVPAVDGPCHTGTG*CAAFVDPDLVCRDE
Trigger: CTCATCCCTGCAGACAAGATCTGGATCAACAAAGGCTGCACACAAACCTGTGCCTGTGTGACAGGGACCATCCACTGCAGGGACTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp GCACCCCGGGCATCTTTACAGCCGCACTGTGTTCTGGGCACACATTaGTCCTCACTGAACACAAAGCCATGGTTGCAAAGACATCCCTCC +
Preference number: 6 (lower is better)
Translates to: APRASLQPHCVLGTH*SSLNTKPWLQRHPS
Trigger: GGAGGGATGTCTTTGCAACCATGGCTTTGTGTTCAGTGAGGACAAATGTGTGCCCAGAACACAGTGCGGCTGTAAAGATGCCCGGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp GAGACCCATGTCTTGCTTTCCGGGATGAGAACGCCATGGGCGTCTTaGCAGCCACACTCACTGCTAGGCACACACTTGTCATTACTCAGC +
Preference number: 6 (lower is better)
Translates to: ETHVLLSGMRTPWAS*QPHSLLGTHLSLLS
Trigger: GCTGAGTAATGACAAGTGTGTGCCTAGCAGTGAGTGTGGCTGCAAAGACGCCCATGGCGTTCTCATCCCGGAAAGCAAGACATGGGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp AGAGTATCAAAGGTGCACATCTGGGACATGCAGACCTaGTTGCAGGTACCCCGCTGGATAGAGAGGCCATCC +
Preference number: 6 (lower is better)
Translates to: RVSKVHIWDMQT*LQVPRWIERPS
Trigger: GGATGGCCTCTCTATCCAGCGGGGTACCTGCAATCAGGTCTGCATGTCCCAGATGTGCACCTTTGATACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp CGCACTGGGGAAAGCTCTCTCCACAGGGAGCTATGCTaGTGGCATCCACAGCTATTGCTGGCTCTGGTATAT +
Preference number: 6 (lower is better)
Translates to: RTGESSLHRELC*WHPQLLLALVY
Trigger: ATATACCAGAGCCAGCAATAGCTGTGGATGCCATCAGCATAGCTCCCTGTGGAGAGAGCTTTCCCCAGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp TGGGAAAACTACCCGCAGGACTTCCCAACAGGAGCTTaGGTGTGGTACCTTTGCCAAGGCCGTACATGTGGT +
Preference number: 6 (lower is better)
Translates to: WENYPQDFPTGA*VWYLCQGRTCG
Trigger: ACCACATGTACGGCCTTGGCAAAGGTACCACACTCAAGCTCCTGTTGGGAAGTCCTGCGGGTAGTTTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp GGGATGGTGACAGAGCTGTTCATCCAGCCAGAGCTCTaGGACCCAACACGGTTCCACAGAGGAATGGGAAAA +
Preference number: 6 (lower is better)
Translates to: GMVTELFIQPEL*DPTRFHRGMGK
Trigger: TTTTCCCATTCCTCTGTGGAACCGTGTTGGGTCTCAGAGCTCTGGCTGGATGAACAGCTCTGTCACCATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp CCGGCAAGCAGCGGCACCGCTCTGTGCAATTGGGAGTaGACCATTCTTCCCCAGGCTTATAGTACTTGTTGT +
Preference number: 6 (lower is better)
Translates to: PASSGTALCNWE*TILPQAYSTCC
Trigger: ACAACAAGTACTATAAGCCTGGGGAAGAATGGTTCACTCCCAATTGCACAGAGCGGTGCCGCTGCTTGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp CCTCAGCTCCTCCTCATCGTGTGTCATCATGCCATCTaGCTTCAGGTTGTCGTTGCTGCTGTCCCCGTCATA +
Preference number: 6 (lower is better)
Translates to: PQLLLIVCHHAI*LQVVVAAVPVI
Trigger: TATGACGGGGACAGCAGCAACGACAACCTGAAGTCAGATGGCATGATGACACACGATGAGGAGGAGCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp GCTACACATGTCAGTCACACAGTTATCCAGGAAGGATaGGGCCTTCAGGTGGAGCAGGCATGCCTCAAAGGG +
Preference number: 6 (lower is better)
Translates to: ATHVSHTVIQEG*GLQVEQACLKG
Trigger: CCCTTTGAGGCATGCCTGCTCCACCTGAAGGCCTCATCCTTCCTGGATAACTGTGTGACTGACATGTGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp GCTATGATCATCAAAGCTCACGATCTGGGAATCCTCTaGGATGCGACACTCTCCCATCTCTGCAGCGCAGCG +
Preference number: 6 (lower is better)
Translates to: AMIIKAHDLGIL*DATLSHLCSAA
Trigger: CGCTGCGCTGCAGAGATGGGAGAGTGTCGCATCTCAGAGGATTCCCAGATCGTGAGCTTTGATGATCATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp AACCACCCTGGGTATGTTGGCAGCCACACTCAATTCTaGGCACACACTTGTCGTTGCGCAGCACATAGCCAG +
Preference number: 6 (lower is better)
Translates to: NHPGYVGSHTQF*AHTCRCAAHSQ
Trigger: CTGGCTATGTGCTGCGCAACGACAAGTGTGTGCTCAGAATTGAGTGTGGCTGCCAACATACCCAGGGTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp ACTGCTGTCATCCTCCATGTCCTTGCAGTAAGTCCCTaGGGAGCAGTGATATTTCTGGCACTGGATGGCCCC +
Preference number: 6 (lower is better)
Translates to: TAVILHVLAVSP*GAVIFLALDGP
Trigger: GGGGCCATCCAGTGCCAGAAATATCACTGCTCCTCAGGGACTTACTGCAAGGACATGGAGGATGACAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp TGCAGCCCCTGGAGATCCACGTCTTGTCTGCTGAGATaGAAGCACCCTGGGTGTTTTTGCAGCCACAGAAGA +
Preference number: 6 (lower is better)
Translates to: CSPWRSTSCLLR*KHPGCFCSHRR
Trigger: TCTTCTGTGGCTGCAAAAACACCCAGGGTGCTTTCATCTCAGCAGACAAGACGTGGATCTCCAGGGGCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp AGCCACACTGGTTTTTGTGCACACACGTGTCCTTATTaGGCAGGTAGCCAGGTTGACAGACACAGCCCTCCC +
Preference number: 6 (lower is better)
Translates to: SHTGFCAHTCPY*AGSQVDRHSPP
Trigger: GGGAGGGCTGTGTCTGTCAACCTGGCTACCTGCTCAATAAGGACACGTGTGTGCACAAAAACCAGTGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp AGAAGGGATGCTGACAGGAGGAATAGTGGTCACTTCTaGAGGGATGGTGGTCTCTTCAGGAGGGGTAGTGGT +
Preference number: 6 (lower is better)
Translates to: RRDADRRNSGHF*RDGGLFRRGSG
Trigger: ACCACTACCCCTCCTGAAGAGACCACCATCCCTGCAGAAGTGACCACTATTCCTCCTGTCAGCATCCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GATCATCAAAGCTCACGATCTGGGAATCCTCTGAGATaGGACACTCTCCCATCTCTGCAGCGCAGCGTAGCA +
Preference number: 6 (lower is better)
Translates to: DHQSSRSGNPLR*DTLPSLQRSVA
Trigger: TGCTACGCTGCGCTGCAGAGATGGGAGAGTGTCGCATCTCAGAGGATTCCCAGATCGTGAGCTTTGATGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp ATGTCCCTGGGGGACACTGGAAATCCCAGCACCTCATaGTTCCTTTCATGCAGGTACAGCTCTGGGTACAGT +
Preference number: 6 (lower is better)
Translates to: MSLGDTGNPSTS*FLSCRYSSGYS
Trigger: ACTGTACCCAGAGCTGTACCTGCATGAAAGGAAGCATGAGGTGCTGGGATTTCCAGTGTCCCCCAGGGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp CTGGGCACTGCAGAGAGATTCTGGTGCAGTTACTGTTaGCGTCCTCGATGTCCTTGCAGTAAGTCTCTGAGG +
Preference number: 6 (lower is better)
Translates to: LGTAERFWCSYC*RPRCPCSKSLR
Trigger: CCTCAGAGACTTACTGCAAGGACATCGAGGACGGCAACAGTAACTGCACCAGAATCTCTCTGCAGTGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp AGTTGCTGTTGGCTGGGCACTGCAGAGAGATTCTGGTaGAGTTACTGTTGCCGTCCTCGATGTCCTTGCAGT +
Preference number: 6 (lower is better)
Translates to: SCCWLGTAERFW*SYCCRPRCPCS
Trigger: ACTGCAAGGACATCGAGGACGGCAACAGTAACTGCACCAGAATCTCTCTGCAGTGCCCAGCCAACAGCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp TTCTGGCACAGTTACTGCTGCCATCTTCATTGTCCTTaGAGTATGCCCCAGGGGGACACTGGAAACTCAGGC +
Preference number: 6 (lower is better)
Translates to: FWHSYCCHLHCP*SMPQGDTGNSG
Trigger: GCCTGAGTTTCCAGTGTCCCCCTGGGGCATACTGCAAGGACAATGAAGATGGCAGCAGTAACTGTGCCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp CCATGGCTCCCTTATGGATTTTGGTGCAGTTGCTGCTaGCGTCACCACTGTCTTTGCAGTAAGTCCCCAAGG +
Preference number: 6 (lower is better)
Translates to: PWLPYGFWCSCC*RHHCLCSKSPR
Trigger: CCTTGGGGACTTACTGCAAAGACAGTGGTGACGGCAGCAGCAACTGCACCAAAATCCATAAGGGAGCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp TGGTACATCTTTCCAGTTTGTTGGCTGCACAGTCACTaGTGCCATCCTCGTTGTACTGGCAGTGGGACCCTG +
Preference number: 6 (lower is better)
Translates to: WYIFPVCWLHSH*CHPRCTGSGTL
Trigger: CAGGGTCCCACTGCCAGTACAACGAGGATGGCAGCAGTGACTGTGCAGCCAACAAACTGGAAAGATGTACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp TCGCAGAAAGGATGGACTCTGTCTTCGAAGTCGCACTaGGGAAAGCTCTCTCCACAGGGAGCTATGCTGATG +
Preference number: 6 (lower is better)
Translates to: SQKGWTLSSKSH*GKLSPQGAMLM
Trigger: CATCAGCATAGCTCCCTGTGGAGAGAGCTTTCCCCAGTGCGACTTCGAAGACAGAGTCCATCCTTTCTGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GAAGTCCAGCTCTTGCCTGCAGGGATGAAACCACCCTaGGTATGTTGGCAGCCACACTCAATTCTGAGCACA +
Preference number: 6 (lower is better)
Translates to: EVQLLPAGMKPP*VCWQPHSILST
Trigger: TGTGCTCAGAATTGAGTGTGGCTGCCAACATACCCAGGGTGGTTTCATCCCTGCAGGCAAGAGCTGGACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GTTGCCCTCATTATTGTCCAGGCAACGGGACCCTGTTaGGCAACTGAAGTCGTGACATTGAACAGTCCCTCC +
Preference number: 6 (lower is better)
Translates to: VALIIVQATGPC*ATEVVTLNSPS
Trigger: GGAGGGACTGTTCAATGTCACGACTTCAGTTGCCCAACAGGGTCCCGTTGCCTGGACAATAATGAGGGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GCACATATCCAACATACAGCGCTGCTCAAAGGGCTCTaGGGCTATGATCTGGTGACATGCAGCAAAGGGTCC +
Preference number: 6 (lower is better)
Translates to: AHIQHTALLKGL*GYDLVTCSKGS
Trigger: GGACCCTTTGCTGCATGTCACCAGATCATAGCCCCAGAGCCCTTTGAGCAGCGCTGTATGTTGGATATGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp ATGGGAAAACTACCCGCAGGACTTCCCAACAGGAGCTaGAGTGTGGTACCTTTGCCAAGGCCGTACATGTGG +
Preference number: 6 (lower is better)
Translates to: MGKLPAGLPNRS*SVVPLPRPYMW
Trigger: CCACATGTACGGCCTTGGCAAAGGTACCACACTCAAGCTCCTGTTGGGAAGTCCTGCGGGTAGTTTTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp AGGTGGAGCAGGCATGCCTCAAAGGGTCCACTTGGGTaGACAAGCTGTCCACATAACTTGGGTCCCGACATA +
Preference number: 6 (lower is better)
Translates to: RWSRHASKGPLG*TSCPHNLGPDI
Trigger: TATGTCGGGACCCAAGTTATGTGGACAGCTTGTCAACCCAAGTGGACCCTTTGAGGCATGCCTGCTCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp TCACAGAAGCTGTTCATACACTTCAGCAAGAAGGGCTaGATGGGTACCCGGGAGGAACAATGGGCCCAGGCA +
Preference number: 6 (lower is better)
Translates to: SQKLFIHFSKKG*MGTREEQWAQA
Trigger: TGCCTGGGCCCATTGTTCCTCCCGGGTACCCATCAAGCCCTTCTTGCTGAAGTGTATGAACAGCTTCTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GCTCTTGCCTGCAGGGATGAAACCACCCTGGGTATGTaGGCAGCCACACTCAATTCTGAGCACACACTTGTC +
Preference number: 6 (lower is better)
Translates to: ALACRDETTLGM*AATLNSEHTLV
Trigger: GACAAGTGTGTGCTCAGAATTGAGTGTGGCTGCCAACATACCCAGGGTGGTTTCATCCCTGCAGGCAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp CCTGTCACACAGGCACAGGTTTGTGTGCAGCCTTTGTaGATCCAGATCTTGTCTGCAGGGATGAGGACACCC +
Preference number: 6 (lower is better)
Translates to: PVTQAQVCVQPL*IQILSAGMRTP
Trigger: GGGTGTCCTCATCCCTGCAGACAAGATCTGGATCAACAAAGGCTGCACACAAACCTGTGCCTGTGTGACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp CCTGCAGTGGATGGTCCCTGTCACACAGGCACAGGTTaGTGTGCAGCCTTTGTTGATCCAGATCTTGTCTGC +
Preference number: 6 (lower is better)
Translates to: PAVDGPCHTGTG*CAAFVDPDLVC
Trigger: GCAGACAAGATCTGGATCAACAAAGGCTGCACACAAACCTGTGCCTGTGTGACAGGGACCATCCACTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GGAGGGATTCTGGCACAGTTACTGCTGCCATCTTCATaGTCCTTGCAGTATGCCCCAGGGGGACACTGGAAA +
Preference number: 6 (lower is better)
Translates to: GGILAQLLLPSS*SLQYAPGGHWK
Trigger: TTTCCAGTGTCCCCCTGGGGCATACTGCAAGGACAATGAAGATGGCAGCAGTAACTGTGCCAGAATCCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GAGCACACACTTGCCATTATTCAAGAAGTAGCCAGGTaGACAGAGGCAGCCCTCCTTGCAGGTGGAAGGGAC +
Preference number: 6 (lower is better)
Translates to: EHTLAIIQEVAR*TEAALLAGGRD
Trigger: GTCCCTTCCACCTGCAAGGAGGGCTGCCTCTGTCAACCTGGCTACTTCTTGAATAATGGCAAGTGTGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp AGTTTGTTGGCTGCACAGTCACTGCTGCCATCCTCGTaGTACTGGCAGTGGGACCCTGATGGGCAGACAAAA +
Preference number: 6 (lower is better)
Translates to: SLLAAQSLLPSS*YWQWDPDGQTK
Trigger: TTTTGTCTGCCCATCAGGGTCCCACTGCCAGTACAACGAGGATGGCAGCAGTGACTGTGCAGCCAACAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp AGGAACAATGGGCCCAGGCAGGACCCTGAAGGGCAGTTTGGCAGTTaGCCTGGGCTTTCTCAAAGTCAATGGGCCTGCATTTTCCATTCA +
Preference number: 6 (lower is better)
Translates to: RNNGPRQDPEGQFGS*PGLSQSQWACIFHS
Trigger: TGAATGGAAAATGCAGGCCCATTGACTTTGAGAAAGCCCAGGCAAACTGCCAAACTGCCCTTCAGGGTCCTGCCTGGGCCCATTGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp CTCAATTCTGAGCACACACTTGTCGTTGCGCAGCACATAGCCAGGTaGACACACGCAGCCCTCTTTGCAGTTAGAGTGGGCATTGGTGCT +
Preference number: 6 (lower is better)
Translates to: LNSEHTLVVAQHIAR*THAALFAVRVGIGA
Trigger: AGCACCAATGCCCACTCTAACTGCAAAGAGGGCTGCGTGTGTCAACCTGGCTATGTGCTGCGCAACGACAAGTGTGTGCTCAGAATTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp GTGAATTTGGAGCACACACTTGTGATTATGCACCACATAGCCAGGTaGACAGAGGCAGCCCTCCTTGCAGGGAGACGGGACTTTGGGACT +
Preference number: 6 (lower is better)
Translates to: VNLEHTLVIMHHIAR*TEAALLAGRRDFGT
Trigger: AGTCCCAAAGTCCCGTCTCCCTGCAAGGAGGGCTGCCTCTGTCAACCTGGCTATGTGGTGCATAATCACAAGTGTGTGCTCCAAATTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp TGCCGGGACAAAGCCACCCTGGGCGTCTTTGCAGCCACAGTGAATTaGGAGCACACACTTGTGATTATGCACCACATAGCCAGGTTGACA +
Preference number: 6 (lower is better)
Translates to: CRDKATLGVFAATVN*EHTLVIMHHIARLT
Trigger: TGTCAACCTGGCTATGTGGTGCATAATCACAAGTGTGTGCTCCAAATTCACTGTGGCTGCAAAGACGCCCAGGGTGGCTTTGTCCCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp ATTGTCCAGGCAACGGGACCCTGTTGGGCAACTGAAGTCGTGACATaGAACAGTCCCTCCTTTGCAGGTGCAGTTCTTGGTACATCCCCT +
Preference number: 6 (lower is better)
Translates to: IVQATGPCWATEVVT*NSPSFAGAVLGTSP
Trigger: AGGGGATGTACCAAGAACTGCACCTGCAAAGGAGGGACTGTTCAATGTCACGACTTCAGTTGCCCAACAGGGTCCCGTTGCCTGGACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp CATCTTTCCAGTTTGTTGGCTGCACAGTCACTGCTGCCATCCTCGTaGTACTGGCAGTGGGACCCTGATGGGCAGACAAAATTCTGGCAC +
Preference number: 6 (lower is better)
Translates to: HLSSLLAAQSLLPSS*YWQWDPDGQTKFWH
Trigger: GTGCCAGAATTTTGTCTGCCCATCAGGGTCCCACTGCCAGTACAACGAGGATGGCAGCAGTGACTGTGCAGCCAACAAACTGGAAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp GGTATGAGGGTACCCTGGGAGTCTTTGCAGCCACACTaGGTTCTGGGCACACACTTGTCCTTACTGAACACA +
Preference number: 6 (lower is better)
Translates to: GMRVPWESLQPH*VLGTHLSLLNT
Trigger: TGTGTTCAGTAAGGACAAGTGTGTGCCCAGAACTCAGTGTGGCTGCAAAGACTCCCAGGGTACCCTCATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp CATTATTGTCCAGGCAACGGGACCCTGTTGGGCAACTaGAGTCGTGACATTGAACAGTCCCTCCTTTGCAGG +
Preference number: 6 (lower is better)
Translates to: HYCPGNGTLLGN*SRDIEQSLLCR
Trigger: CCTGCAAAGGAGGGACTGTTCAATGTCACGACTTCAGTTGCCCAACAGGGTCCCGTTGCCTGGACAATAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp CGTGTGTCATCATGCCATCTGACTTCAGGTTGTCGTTaGTGCTGTCCCCGTCATAGTTCCCACAGAAACCAC +
Preference number: 6 (lower is better)
Translates to: RVSSCHLTSGCR*CCPRHSSHRNH
Trigger: GTGGTTTCTGTGGGAACTATGACGGGGACAGCAGCAACGACAACCTGAAGTCAGATGGCATGATGACACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp TTGAGCCCCTGGTTCTGGCAGGCATCTTCAAAGGACTaGAGAGAATCACAAAGAGCACGGAAGAGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: LSPWFWQASSKD*RESQRARKSSL
Trigger: CAGAGAGCTCTTCCGTGCTCTTTGTGATTCTCTGCAGTCCTTTGAAGATGCCTGCCAGAACCAGGGGCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GGAAGGCAGTCTGTGAACTTGCTGTGGGCTGGGCACTaGAGAGAGATTTTGACACAGTTACTGCTGCCATCA +
Preference number: 6 (lower is better)
Translates to: GRQSVNLLWAGH*REILTQLLLPS
Trigger: TGATGGCAGCAGTAACTGTGTCAAAATCTCTCTGCAGTGCCCAGCCCACAGCAAGTTCACAGACTGCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp ACAGTTACTGCTGCCATCTTCATTGTCCTTGCAGTATaGCCCAGGGGGACACTGGAAACTCAGGCACTGGAT +
Preference number: 6 (lower is better)
Translates to: TVTAAIFIVLAV*PRGTLETQALD
Trigger: ATCCAGTGCCTGAGTTTCCAGTGTCCCCCTGGGGCATACTGCAAGGACAATGAAGATGGCAGCAGTAACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp TTTTGGTGCAGTTGCTGCTGCCGTCACCACTGTCTTTaGAGTAAGTCCCCAAGGGACACTGGAAATTCTGGC +
Preference number: 6 (lower is better)
Translates to: FWCSCCCRHHCL*SKSPRDTGNSG
Trigger: GCCAGAATTTCCAGTGTCCCTTGGGGACTTACTGCAAAGACAGTGGTGACGGCAGCAGCAACTGCACCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GGGCTGGGCACTGCAGAGCAATTTTGGTACAGTTACTaGCTCCATCAACACTGTCCTTGCATTCAGTCCCCA +
Preference number: 6 (lower is better)
Translates to: GLGTAEQFWYSY*LHQHCPCIQSP
Trigger: TGGGGACTGAATGCAAGGACAGTGTTGATGGAGGCAGTAACTGTACCAAAATTGCTCTGCAGTGCCCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp TACATCTTTCCAGTTTGTTGGCTGCACAGTCACTGCTaGCATCCTCGTTGTACTGGCAGTGGGACCCTGATG +
Preference number: 6 (lower is better)
Translates to: YIFPVCWLHSHC*HPRCTGSGTLM
Trigger: CATCAGGGTCCCACTGCCAGTACAACGAGGATGGCAGCAGTGACTGTGCAGCCAACAAACTGGAAAGATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CTTCTGTGTGAACACCTGTCACTTCAGTGGGTACAGTaGGCACTTCTGTGTAGAGAGTGGTCTCTCCAGTGG +
Preference number: 6 (lower is better)
Translates to: LLCEHLSLQWVQ*ALLCREWSLQW
Trigger: CCACTGGAGAGACCACTCTCTACACAGAAGTGCCCACTGTACCCACTGAAGTGACAGGTGTTCACACAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CCTCAGTGGGGACACTGGTCTCTTCAGGAGAGACATTaGTCACTTCTGTGTGAACACCTGTCACTTCAGTGG +
Preference number: 6 (lower is better)
Translates to: PQWGHWSLQERH*SLLCEHLSLQW
Trigger: CCACTGAAGTGACAGGTGTTCACACAGAAGTGACCAATGTCTCTCCTGAAGAGACCAGTGTCCCCACTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CACCTGTCATTTCTGTGGAGACAGTGGGCACTTCTGTaGGAACAGTGGTCTCCCCAGTGGGAAAAGTGGTTA +
Preference number: 6 (lower is better)
Translates to: HLSFLWRQWALL*EQWSPQWEKWL
Trigger: TAACCACTTTTCCCACTGGGGAGACCACTGTTCCCACAGAAGTGCCCACTGTCTCCACAGAAATGACAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CTTCAGAAGCAATGGTGGTCTCTTCAGGAGGGACAGTaGTTTCCTCAGGAAAGATGCTGGCAGGAGGAACAG +
Preference number: 6 (lower is better)
Translates to: LQKQWWSLQEGQ*FPQERCWQEEQ
Trigger: CTGTTCCTCCTGCCAGCATCTTTCCTGAGGAAACCACTGTCCCTCCTGAAGAGACCACCATTGCTTCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp TCCCGACATAGTGCTCCCCAAAGCAGCGTCACAAGATaGGGGATTCTTCTTCTTCTGACACCTGGAAGAGAC +
Preference number: 6 (lower is better)
Translates to: SRHSAPQSSVTR*GILLLLTPGRD
Trigger: GTCTCTTCCAGGTGTCAGAAGAAGAAGAATCCCCCATCTTGTGACGCTGCTTTGGGGAGCACTATGTCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp TTGATCCAGATCTTGTCTGCAGGGATGAGGACACCCTaGGCATCTTTGCAGCCACACTCAATTCTGGGCACA +
Preference number: 6 (lower is better)
Translates to: LIQILSAGMRTP*ASLQPHSILGT
Trigger: TGTGCCCAGAATTGAGTGTGGCTGCAAAGATGCCCAGGGTGTCCTCATCCCTGCAGACAAGATCTGGATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp TTGATCCAGGTCTTATCTGCAGGGATGAGGACACCCTaGGTGTCTTTGCAGCCACACTCAATTCTGGGCACA +
Preference number: 6 (lower is better)
Translates to: LIQVLSAGMRTP*VSLQPHSILGT
Trigger: TGTGCCCAGAATTGAGTGTGGCTGCAAAGACACCCAGGGTGTCCTCATCCCTGCAGATAAGACCTGGATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp TTGATCCAGGTCTTATCTGCAGGGATGAGGACACCCTaGGCATCTTTGCAGCCACACTCAATTCTGGGCACA +
Preference number: 6 (lower is better)
Translates to: LIQVLSAGMRTP*ASLQPHSILGT
Trigger: TGTGCCCAGAATTGAGTGTGGCTGCAAAGATGCCCAGGGTGTCCTCATCCCTGCAGATAAGACCTGGATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp ACAAGAAGGCAGGCAGCTGGTGAAGTTGCTGTTGGCTaGGCACTGCAGAGAGATTCTGGTGCAGTTACTGTT +
Preference number: 6 (lower is better)
Translates to: TRRQAAGEVAVG*ALQRDSGAVTV
Trigger: AACAGTAACTGCACCAGAATCTCTCTGCAGTGCCCAGCCAACAGCAACTTCACCAGCTGCCTGCCTTCTTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp ACTGCTGCCTTCACTGTTGTCCTTGCAGTAGGTCTCTaGGGGACACTGGAAATTCTGGCACTGGATATTGCC +
Preference number: 6 (lower is better)
Translates to: TAAFTVVLAVGL*GTLEILALDIA
Trigger: GGCAATATCCAGTGCCAGAATTTCCAGTGTCCCCCAGAGACCTACTGCAAGGACAACAGTGAAGGCAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GAGAGCCATGTCTTGCCAGCCGGAATGACAGCGCCCTaGGTGTCTCTGCAGCCACACTCAATTTTAAGAATA +
Preference number: 6 (lower is better)
Translates to: ESHVLPAGMTAP*VSLQPHSILRI
Trigger: TATTCTTAAAATTGAGTGTGGCTGCAGAGACACCCAGGGCGCTGTCATTCCGGCTGGCAAGACATGGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp TGTGATGGCTGTGGGCTGGGCACTGCAGAGCAATTTTaGTACAGTTACTGCCTCCATCAACACTGTCCTTGC +
Preference number: 6 (lower is better)
Translates to: CDGCGLGTAEQF*YSYCLHQHCPC
Trigger: GCAAGGACAGTGTTGATGGAGGCAGTAACTGTACCAAAATTGCTCTGCAGTGCCCAGCCCACAGCCATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GACATTGAACAGTCCCTCCTTTGCAGGTGCAGTTCTTaGTACATCCCCTGGAGACCCATGTCTTGCTTTCCG +
Preference number: 6 (lower is better)
Translates to: DIEQSLLCRCSS*YIPWRPMSCFP
Trigger: CGGAAAGCAAGACATGGGTCTCCAGGGGATGTACCAAGAACTGCACCTGCAAAGGAGGGACTGTTCAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GCTGGTCACCATCCCATCTCACACGCAAACCAAATGTaGTCCTCAGCTCCACAAATCTCCCACTCAGACCCA +
Preference number: 6 (lower is better)
Translates to: AGHHPISHANQM*SSAPQISHSDP
Trigger: TGGGTCTGAGTGGGAGATTTGTGGAGCTGAGGACAACATTTGGTTTGCGTGTGAGATGGGATGGTGACCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp ATGAAGCCAGGGTCACACTCGCAGCCTTCCACACACTaGTCTGAGCAGTGCTGGGTAGTAGATATAGGATGG +
Preference number: 6 (lower is better)
Translates to: MKPGSHSQPSTH*SEQCWVVDIGW
Trigger: CCATCCTATATCTACTACCCAGCACTGCTCAGACAAGTGTGTGGAAGGCTGCGAGTGTGACCCTGGCTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp ATCTTGTCTGCAGGGATGAGGACACCCTGGGCATCTTaGCAGCCACACTCAATTCTGGGCACACACTTGTTG +
Preference number: 6 (lower is better)
Translates to: ILSAGMRTPWAS*QPHSILGTHLL
Trigger: CAACAAGTGTGTGCCCAGAATTGAGTGTGGCTGCAAAGATGCCCAGGGTGTCCTCATCCCTGCAGACAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GCACAGGTTTGTGTGCAGCCTTTGTTGATCCAGATCTaGTCTGCAGGGATGAGGACACCCTGGGCATCTTTG +
Preference number: 6 (lower is better)
Translates to: AQVCVQPLLIQI*SAGMRTPWASL
Trigger: CAAAGATGCCCAGGGTGTCCTCATCCCTGCAGACAAGATCTGGATCAACAAAGGCTGCACACAAACCTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GTCCCTGTCACACAGGCACAGGTTTGTGTGCAGCCTTaGTTGATCCAGATCTTGTCTGCAGGGATGAGGACA +
Preference number: 6 (lower is better)
Translates to: VPVTQAQVCVQP*LIQILSAGMRT
Trigger: TGTCCTCATCCCTGCAGACAAGATCTGGATCAACAAAGGCTGCACACAAACCTGTGCCTGTGTGACAGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GTCTTATCTGCAGGGATGAGGACACCCTGGGCATCTTaGCAGCCACACTCAATTCTGGGCACACACTTGTTG +
Preference number: 6 (lower is better)
Translates to: VLSAGMRTPWAS*QPHSILGTHLL
Trigger: CAACAAGTGTGTGCCCAGAATTGAGTGTGGCTGCAAAGATGCCCAGGGTGTCCTCATCCCTGCAGATAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp ATTCTGGCACAGTTACTGCTGCCATCTTCATTGTCCTaGCAGTATGCCCCAGGGGGACACTGGAAACTCAGG +
Preference number: 6 (lower is better)
Translates to: ILAQLLLPSSLS*QYAPGGHWKLR
Trigger: CCTGAGTTTCCAGTGTCCCCCTGGGGCATACTGCAAGGACAATGAAGATGGCAGCAGTAACTGTGCCAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp AAGAATACACTTGTCTTTATCCAGCACGTAGCCAGGTaGACAGACGCAGCCCTCCTTGCAAGTAGAGGGGCC +
Preference number: 6 (lower is better)
Translates to: KNTLVFIQHVAR*TDAALLASRGA
Trigger: GGCCCCTCTACTTGCAAGGAGGGCTGCGTCTGTCAACCTGGCTACGTGCTGGATAAAGACAAGTGTATTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp TCACCACTGGGTGTCATGAGCTCATCCTCTTCTTCGCCGTTGAAATaGCCACACACACCGCAGACCTTCCCATTAGAGGATGCAGGGATT +
Preference number: 6 (lower is better)
Translates to: SPLGVMSSSSSSPLK*PHTPQTFPLEDAGI
Trigger: AATCCCTGCATCCTCTAATGGGAAGGTCTGCGGTGTGTGTGGCAATTTCAACGGCGAAGAAGAGGATGAGCTCATGACACCCAGTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp GCTGGGCACTGCAGAGAGATTTTGACACAGTTACTGCTGCCATCATaGCTGTTCTTGCAGTATGTCCCTGGGGGACACTGGAAATCCCAG +
Preference number: 6 (lower is better)
Translates to: AGHCREILTQLLLPS*LFLQYVPGGHWKSQ
Trigger: CTGGGATTTCCAGTGTCCCCCAGGGACATACTGCAAGAACAGCAATGATGGCAGCAGTAACTGTGTCAAAATCTCTCTGCAGTGCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp TGGGTACAGTCACTGGAGATCCAGGTGTTGCCTGCCGGGATGATGTaGCCCCTGATATCTTTACAGCCACACTGGTTTTTGTGCACACAC +
Preference number: 6 (lower is better)
Translates to: WVQSLEIQVLPAGMM*PLISLQPHWFLCTH
Trigger: GTGTGTGCACAAAAACCAGTGTGGCTGTAAAGATATCAGGGGCAACATCATCCCGGCAGGCAACACCTGGATCTCCAGTGACTGTACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp TTGATCCAGGTCTTATCTGCAGGGATGAGGACACCCTGGGCATCTTaGCAGCCACACTCAATTCTGGGCACACACTTGTTGTTAAGCACC +
Preference number: 6 (lower is better)
Translates to: LIQVLSAGMRTPWAS*QPHSILGTHLLLST
Trigger: GGTGCTTAACAACAAGTGTGTGCCCAGAATTGAGTGTGGCTGCAAAGATGCCCAGGGTGTCCTCATCCCTGCAGATAAGACCTGGATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp CTGATTTCTGAGTATACACTTGTCATTATGCAACACGTAGCCAGATaGACAGACACAGCCCTCCCTGCAGGAGGAGAGAGCGTTGGGGCT +
Preference number: 6 (lower is better)
Translates to: LISEYTLVIMQHVAR*TDTALPAGGESVGA
Trigger: AGCCCCAACGCTCTCTCCTCCTGCAGGGAGGGCTGTGTCTGTCAATCTGGCTACGTGTTGCATAATGACAAGTGTATACTCAGAAATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp GAACAAGAAGGCACACAGGAGGGAAGGCAGTCTGTGAATTGGCTGTaGGTTGGGCATTGTAGAGTGATTTCGGTGCAGTTAGAGCTGCCA +
Preference number: 6 (lower is better)
Translates to: EQEGTQEGRQSVNWL*VGHCRVISVQLELP
Trigger: TGGCAGCTCTAACTGCACCGAAATCACTCTACAATGCCCAACCAACAGCCAATTCACAGACTGCCTTCCCTCCTGTGTGCCTTCTTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp ATGGTGGTCACTTCATGCAAGGTTGAACTCCCTTTGGGGGATATTTaGTTACGTCCCTCCATGATCAGGGGCTCAATCCCTCTTGGGAGC +
Preference number: 6 (lower is better)
Translates to: MVVTSCKVELPLGDI*LRPSMIRGSIPLGS
Trigger: GCTCCCAAGAGGGATTGAGCCCCTGATCATGGAGGGACGTAACAAAATATCCCCCAAAGGGAGTTCAACCTTGCATGAAGTGACCACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp GCAGCAATACCCGACATGGTCCATGAGAGATCAAGATaGAGTTCAGAGCGACAACAAAGGCAGTGCTGGTGC +
Preference number: 6 (lower is better)
Translates to: AAIPDMVHERSR*SSERQQRQCWC
Trigger: GCACCAGCACTGCCTTTGTTGTCGCTCTGAACTTCATCTTGATCTCTCATGGACCATGTCGGGTATTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp CTGGTCTCTTCAGGAGAGACATTGGTCACTTCTGTGTaGACACCTGTCACTTCAGTGGGTACAGTGGGCACT +
Preference number: 6 (lower is better)
Translates to: LVSSGETLVTSV*TPVTSVGTVGT
Trigger: AGTGCCCACTGTACCCACTGAAGTGACAGGTGTTCACACAGAAGTGACCAATGTCTCTCCTGAAGAGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp TACAGTCTTCGGATATCCAAGTCTTGCCTGCCGGGATaGAGACACCCTGAGCATCTTTGCAGCCACAATGAG +
Preference number: 6 (lower is better)
Translates to: YSLRISKSCLPG*RHPEHLCSHNE
Trigger: CTCATTGTGGCTGCAAAGATGCTCAGGGTGTCTTCATCCCGGCAGGCAAGACTTGGATATCCGAAGACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp ATTTGGAGTAGTGACTGTGGGCCGGGCACTGCACAGTaGTTTCAACACAGTTACTGTTGCCGTCCTCGATGT +
Preference number: 6 (lower is better)
Translates to: IWSSDCGPGTAQ*FQHSYCCRPRC
Trigger: ACATCGAGGACGGCAACAGTAACTGTGTTGAAATCACTGTGCAGTGCCCGGCCCACAGTCACTACTCCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp CAGGGGACTCAGAAGAACAGCTTTCTGTCCTGGCCTTaGATTCGTAGAGTCCAGGAGCATGTAGTAGCCATT +
Preference number: 6 (lower is better)
Translates to: QGTQKNSFLSWP*IRRVQEHVVAI
Trigger: AATGGCTACTACATGCTCCTGGACTCTACGAATGCAAGGCCAGGACAGAAAGCTGTTCTTCTGAGTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GTGTCATCATGCCATCTGACTTCAGGTTGTCGTTGCTaGTGTCCCCGTCATAGTTCCCACAGAAACCACAGA +
Preference number: 6 (lower is better)
Translates to: VSSCHLTSGCRC*CPRHSSHRNHR
Trigger: TCTGTGGTTTCTGTGGGAACTATGACGGGGACAGCAGCAACGACAACCTGAAGTCAGATGGCATGATGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GACACTGGAAATCCCAGCACCTCATGCTTCCTTTCATaGAGGTACAGCTCTGGGTACAGTCTTCGGATATCC +
Preference number: 6 (lower is better)
Translates to: DTGNPSTSCFLS*RYSSGYSLRIS
Trigger: GGATATCCGAAGACTGTACCCAGAGCTGTACCTGCATGAAAGGAAGCATGAGGTGCTGGGATTTCCAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp TTGTGGCACAGCTACTGCTGTCATCCTCCATGTCCTTaGAGTAAGTCCCTGAGGAGCAGTGATATTTCTGGC +
Preference number: 6 (lower is better)
Translates to: LWHSYCCHPPCP*SKSLRSSDISG
Trigger: GCCAGAAATATCACTGCTCCTCAGGGACTTACTGCAAGGACATGGAGGATGACAGCAGTAGCTGTGCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp TTTTGGTGCAAGTACTGCTGCCTTCACTGTTGTCCTTaGAGTAGGTCTCTGGGGGACACTGGAAATTCTGGC +
Preference number: 6 (lower is better)
Translates to: FWCKYCCLHCCP*SRSLGDTGNSG
Trigger: GCCAGAATTTCCAGTGTCCCCCAGAGACCTACTGCAAGGACAACAGTGAAGGCAGCAGTACTTGCACCAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GTCTGGAATTGTCTTCAAAGTCACACTTGGAGAGAATaGAATCCTCCCTCGAAGTGTGCACCATCGGCCCCA +
Preference number: 6 (lower is better)
Translates to: VWNCLQSHTWRE*NPPSKCAPSAP
Trigger: TGGGGCCGATGGTGCACACTTCGAGGGAGGATTCCATTCTCTCCAAGTGTGACTTTGAAGACAATTCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CAGTGGTCACTTCTGTGTGAACACCTGTCATTTCTGTaGAGACAGTGGGCACTTCTGTGGGAACAGTGGTCT +
Preference number: 6 (lower is better)
Translates to: QWSLLCEHLSFL*RQWALLWEQWS
Trigger: AGACCACTGTTCCCACAGAAGTGCCCACTGTCTCCACAGAAATGACAGGTGTTCACACAGAAGTGACCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CTTGAGTGGAGACAGTGGTCTCTTCAGAAGCAATGGTaGTCTCTTCAGGAGGGACAGTGGTTTCCTCAGGAA +
Preference number: 6 (lower is better)
Translates to: LEWRQWSLQKQW*SLQEGQWFPQE
Trigger: TTCCTGAGGAAACCACTGTCCCTCCTGAAGAGACCACCATTGCTTCTGAAGAGACCACTGTCTCCACTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp TCATTGCTGTTCTTGCAGTATGTCCCTGGGGGACACTaGAAATCCCAGCACCTCATGCTTCCTTTCATGCAG +
Preference number: 6 (lower is better)
Translates to: SLLFLQYVPGGH*KSQHLMLPFMQ
Trigger: CTGCATGAAAGGAAGCATGAGGTGCTGGGATTTCCAGTGTCCCCCAGGGACATACTGCAAGAACAGCAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp AAGTCTTCAAGGGACACTGAAAATTCTGGCACTGGATaGCCCCTCCTGTGCAGTTACAGCTCTGAGTACAGC +
Preference number: 6 (lower is better)
Translates to: KSSRDTENSGTG*PLLCSYSSEYS
Trigger: GCTGTACTCAGAGCTGTAACTGCACAGGAGGGGCCATCCAGTGCCAGAATTTTCAGTGTCCCTTGAAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp TTGAAAGGAGTGGTCCGATGGGCATTAGTGGAGGACTaGGACAGGGTGGTCTGCATGCTATGGATGTTTGAG +
Preference number: 6 (lower is better)
Translates to: LKGVVRWALVED*DRVVCMLWMFE
Trigger: CTCAAACATCCATAGCATGCAGACCACCCTGTCCAAGTCCTCCACTAATGCCCATCGGACCACTCCTTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GGTGTCATGAGCTCATCCTCTTCTTCGCCGTTGAAATaGCCACACACACCGCAGACCTTCCCATTAGAGGAT +
Preference number: 6 (lower is better)
Translates to: GVMSSSSSSPLK*PHTPQTFPLED
Trigger: ATCCTCTAATGGGAAGGTCTGCGGTGTGTGTGGCAATTTCAACGGCGAAGAAGAGGATGAGCTCATGACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GGCACACAGGAGGGAAGGCAGTCTGTGAATTGGCTGTaGGTTGGGCATTGTAGAGTGATTTCGGTGCAGTTA +
Preference number: 6 (lower is better)
Translates to: GTQEGRQSVNWL*VGHCRVISVQL
Trigger: TAACTGCACCGAAATCACTCTACAATGCCCAACCAACAGCCAATTCACAGACTGCCTTCCCTCCTGTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp CCAGCAATGAATGTTCCCTCCTTTGCAGGTACACTTTaGGGCACAGCCTCTGGTAAGCCAGGTCTTGTTTGC +
Preference number: 6 (lower is better)
Translates to: PAMNVPSFAGTL*GTASGKPGLVC
Trigger: GCAAACAAGACCTGGCTTACCAGAGGCTGTGCCCAAAAGTGTACCTGCAAAGGAGGGAACATTCATTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp TCACTGGAGATCCAGGTGTTGCCTGCCGGGATGATGTaGCCCCTGATATCTTTACAGCCACACTGGTTTTTG +
Preference number: 6 (lower is better)
Translates to: SLEIQVLPAGMM*PLISLQPHWFL
Trigger: CAAAAACCAGTGTGGCTGTAAAGATATCAGGGGCAACATCATCCCGGCAGGCAACACCTGGATCTCCAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp CAAAAAGCTGCTGGTCACCATCCCATCTCACACGCAAACCAAATGTaGTCCTCAGCTCCACAAATCTCCCACTCAGACCCACATAGGTGT +
Preference number: 6 (lower is better)
Translates to: QKAAGHHPISHANQM*SSAPQISHSDPHRC
Trigger: ACACCTATGTGGGTCTGAGTGGGAGATTTGTGGAGCTGAGGACAACATTTGGTTTGCGTGTGAGATGGGATGGTGACCAGCAGCTTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp GCCATCATGTATCTCGTTGGTGGCGCTCACGACGAAGTTGTTCTCTaGAGATTTAGACCAGCAAGGCTGGGTCAGTACATAAGTGCAGGT +
Preference number: 6 (lower is better)
Translates to: AIMYLVGGAHDEVVL*RFRPARLGQYISAG
Trigger: ACCTGCACTTATGTACTGACCCAGCCTTGCTGGTCTAAATCTCAAGAGAACAACTTCGTCGTGAGCGCCACCAACGAGATACATGATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp TTGATCCAGGTCTTATCTGCAGGGATGAGGACACCCTGGGTGTCTTaGCAGCCACACTCAATTCTGGGCACACACTTGTTGTTAAGCATC +
Preference number: 6 (lower is better)
Translates to: LIQVLSAGMRTPWVS*QPHSILGTHLLLSI
Trigger: GATGCTTAACAACAAGTGTGTGCCCAGAATTGAGTGTGGCTGCAAAGACACCCAGGGTGTCCTCATCCCTGCAGATAAGACCTGGATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp CTGGTCTCTTCAGGAAACACAGTGGTCACTTCTGTGTaGACACCTGTCATTTCTGTGGAGACAGTGGGCACT +
Preference number: 6 (lower is better)
Translates to: LVSSGNTVVTSV*TPVISVETVGT
Trigger: AGTGCCCACTGTCTCCACAGAAATGACAGGTGTTCACACAGAAGTGACCACTGTGTTTCCTGAAGAGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp AAAGCAGCGTCACAAGATGGGGGATTCTTCTTCTTCTaGCACCTGGAAGAGACCCAATCCTTGTCCTCATCC +
Preference number: 6 (lower is better)
Translates to: KAASQDGGFFFF*HLEETQSLSSS
Trigger: GGATGAGGACAAGGATTGGGTCTCTTCCAGGTGTCAGAAGAAGAAGAATCCCCCATCTTGTGACGCTGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp TTGATCCAAGTCTTACCTGCCGGGATGAGAACACCCTaGGCATCTTTGCAGCCACACTCAATTCTGAGCACA +
Preference number: 6 (lower is better)
Translates to: LIQVLPAGMRTP*ASLQPHSILST
Trigger: TGTGCTCAGAATTGAGTGTGGCTGCAAAGATGCTCAGGGTGTTCTCATCCCGGCAGGTAAGACTTGGATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp AGCTCCAGCCGCAGAGATCATTTAGAGTATCAAAGGTaGACATCTGGGACATGCAGACCTGATTGCAGGTAC +
Preference number: 6 (lower is better)
Translates to: SSSRRDHLEYQR*TSGTCRPDCRY
Trigger: GTACCTGCAATCAGGTCTGCATGTCCCAGATGTGCACCTTTGATACTCTAAATGATCTCTGCGGCTGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp TTGCCCGAGAAGGTACTGGACACAGTCACAAAAAGCTaGTGGTCACCATCCCATCTCACACGCAAACCAAAT +
Preference number: 6 (lower is better)
Translates to: LPEKVLDTVTKS*WSPSHLTRKPN
Trigger: ATTTGGTTTGCGTGTGAGATGGGATGGTGACCAGCAGCTTTTTGTGACTGTGTCCAGTACCTTCTCGGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp TGTCCCCGTCATAGTTCCCACAGAAACCACAGAGTTTaGCCGAGAAGGTACTGGACACAGTCACAAAAAGCT +
Preference number: 6 (lower is better)
Translates to: CPRHSSHRNHRV*PRRYWTQSQKA
Trigger: AGCTTTTTGTGACTGTGTCCAGTACCTTCTCGGGCAAACTCTGTGGTTTCTGTGGGAACTATGACGGGGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp CCATTCATGATCTCCTGCTGTTCCACTTGGAGGTTCTaGCCTTCGATTTTCTGGCAATTTGGGTCCATGCTC +
Preference number: 6 (lower is better)
Translates to: PFMISCCSTWRF*PSIFWQFGSML
Trigger: GAGCATGGACCCAAATTGCCAGAAAATCGAAGGGCAGAACCTCCAAGTGGAACAGCAGGAGATCATGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GGCATTTGTAACTCTGGCACTGAAAGAACCCTCCCTTaGATGTACAGATCTTGGAACACCCAGAGGAGATCC +
Preference number: 6 (lower is better)
Translates to: GICNSGTERTLP*MYRSWNTQRRS
Trigger: GGATCTCCTCTGGGTGTTCCAAGATCTGTACATGCAAGGGAGGGTTCTTTCAGTGCCAGAGTTACAAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp GAACTCGGTGGCTTTGAAGGTAGGCTCTGGAACATCTaGATCCTCCAGCCTAAGTCTACTTTGTCTCAACAG +
Preference number: 6 (lower is better)
Translates to: ELGGFEGRLWNI*ILQPKSTLSQQ
Trigger: CTGTTGAGACAAAGTAGACTTAGGCTGGAGGATGCAGATGTTCCAGAGCCTACCTTCAAAGCCACCGAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp ACTCAGACCCACATAGGTGTCATCAGAAAGTATGGCTaGGAGGGTGACTTCCTGATCCCCAATCAATGTGTG +
Preference number: 6 (lower is better)
Translates to: TQTHIGVIRKYG*EGDFLIPNQCV
Trigger: CACACATTGATTGGGGATCAGGAAGTCACCCTCCCAGCCATACTTTCTGATGACACCTATGTGGGTCTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp TGTCACCTCCACCAGGTGCCTTCCATCGTATCGAACTaGAAGCCCAAAGTTCGTGTAGAGCAGGACAAAGAT +
Preference number: 6 (lower is better)
Translates to: CHLHQVPSIVSN*KPKVRVEQDKD
Trigger: ATCTTTGTCCTGCTCTACACGAACTTTGGGCTTCAAGTTCGATACGATGGAAGGCACCTGGTGGAGGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GTGAACTTGCTGTGGGCTGGGCACTGCAGAGAGATTTaGACACAGTTACTGCTGCCATCATTGCTGTTCTTG +
Preference number: 6 (lower is better)
Translates to: VNLLWAGHCREI*TQLLLPSLLFL
Trigger: CAAGAACAGCAATGATGGCAGCAGTAACTGTGTCAAAATCTCTCTGCAGTGCCCAGCCCACAGCAAGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp GGATGTTTGAGTGACAGCAGATTGCTCTGTAAGGAGAGTGGTCTCTaGAGTGGAGACAGTGGTCTCTTCAGAAGCAATGGTGGTCTCTTC +
Preference number: 6 (lower is better)
Translates to: GCLSDSRLLCKESGL*SGDSGLFRSNGGLF
Trigger: GAAGAGACCACCATTGCTTCTGAAGAGACCACTGTCTCCACTCAAGAGACCACTCTCCTTACAGAGCAATCTGCTGTCACTCAAACATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp TCAGAGGCTTCAAGGATTTTCCAAGCAGCTCCCAGCAGAAGTGAGTaGCCTGCTGGCTTCATGTCTACACGCAAATTGTCATCCATACTG +
Preference number: 6 (lower is better)
Translates to: SEASRIFQAAPSRSE*PAGFMSTRKLSSIL
Trigger: CAGTATGGATGACAATTTGCGTGTAGACATGAAGCCAGCAGGCAACTCACTTCTGCTGGGAGCTGCTTGGAAAATCCTTGAAGCCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp GTCAATGGGCCTGCATTTTCCATTCATGATCTCCTGCTGTTCCACTaGGAGGTTCTGCCCTTCGATTTTCTGGCAATTTGGGTCCATGCT +
Preference number: 6 (lower is better)
Translates to: VNGPAFSIHDLLLFH*EVLPFDFLAIWVHA
Trigger: AGCATGGACCCAAATTGCCAGAAAATCGAAGGGCAGAACCTCCAAGTGGAACAGCAGGAGATCATGAATGGAAAATGCAGGCCCATTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp CTCAATTTTAAGAATACACTTGTCTTTATCCAGCACGTAGCCAGGTaGACAGACGCAGCCCTCCTTGCAAGTAGAGGGGCCTTTAGGGCT +
Preference number: 6 (lower is better)
Translates to: LNFKNTLVFIQHVAR*TDAALLASRGAFRA
Trigger: AGCCCTAAAGGCCCCTCTACTTGCAAGGAGGGCTGCGTCTGTCAACCTGGCTACGTGCTGGATAAAGACAAGTGTATTCTTAAAATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp CTCATGCCTTCAAACATCAGCCAGCTTGGTATATCATaGTCTGCTGGTACAGTGACAGTGGTGGGCATCCAA +
Preference number: 6 (lower is better)
Translates to: LMPSNISQLGIS*SAGTVTVVGIQ
Trigger: TTGGATGCCCACCACTGTCACTGTACCAGCAGATCATGATATACCAAGCTGGCTGATGTTTGAAGGCATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp GGGATGAGAGCACCCTGGGCATCTTTGCAGCCACACTaGTTTCTGAGTATACACTTGTCATTATGCAACACG +
Preference number: 6 (lower is better)
Translates to: GMRAPWASLQPH*FLSIHLSLCNT
Trigger: CGTGTTGCATAATGACAAGTGTATACTCAGAAATCAGTGTGGCTGCAAAGATGCCCAGGGTGCTCTCATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp GGAATGAGGCCACCTTGGGTGTCCTTGCAGCCACACTaGATTCGGAGCACACACTTATCGTTATTTAACAAG +
Preference number: 6 (lower is better)
Translates to: GMRPPWVSLQPH*IRSTHLSLFNK
Trigger: CTTGTTAAATAACGATAAGTGTGTGCTCCGAATTCAGTGTGGCTGCAAGGACACCCAAGGTGGCCTCATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp GCTCAATCCCTCTTGGGAGCTTGTCCACCGTCTTTATaGGATAGTAGTTCATACGACCCAGGAAGTGGTAAG +
Preference number: 6 (lower is better)
Translates to: AQSLLGACPPSL*DSSSYDPGSGK
Trigger: CTTACCACTTCCTGGGTCGTATGAACTACTATCTCATAAAGACGGTGGACAAGCTCCCAAGAGGGATTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp CTTCACCTCCCAACTGTTGCCATAGACATGGACATTTaGGGTGAGTACTCCACTGGGCAGCATGAGTTCATT +
Preference number: 6 (lower is better)
Translates to: LHLPTVAIDMDI*GEYSTGQHEFI
Trigger: AATGAACTCATGCTGCCCAGTGGAGTACTCACCTCAAATGTCCATGTCTATGGCAACAGTTGGGAGGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp TCCACAGGGAGCTATGCTGATGGCATCCACAGCTATTaGTGGCTCTGGTATATTTCCAAACATACCCACTAC +
Preference number: 6 (lower is better)
Translates to: STGSYADGIHSY*WLWYISKHTHY
Trigger: GTAGTGGGTATGTTTGGAAATATACCAGAGCCAGCAATAGCTGTGGATGCCATCAGCATAGCTCCCTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp CAAGGATTTTCCAAGCAGCTCCCAGCAGAAGTGAGTTaGCTGCTGGCTTCATGTCTACACGCAAATTGTCAT +
Preference number: 6 (lower is better)
Translates to: QGFSKQLPAEVS*LLASCLHANCH
Trigger: ATGACAATTTGCGTGTAGACATGAAGCCAGCAGGCAACTCACTTCTGCTGGGAGCTGCTTGGAAAATCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp ATCGAAGTTCCTCTTCTTCTTTGGTCTTCCAGCCAGTaGACATATCCAACATACAGCGCTGCTCAAAGGGCT +
Preference number: 6 (lower is better)
Translates to: IEVPLLLWSSSQ*TYPTYSAAQRA
Trigger: AGCCCTTTGAGCAGCGCTGTATGTTGGATATGTGCACTGGCTGGAAGACCAAAGAAGAAGAGGAACTTCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp TTCAAACATCAGCCAGCTTGGTATATCATGATCTGCTaGTACAGTGACAGTGGTGGGCATCCAAGAGGGACT +
Preference number: 6 (lower is better)
Translates to: FKHQPAWYIMIC*YSDSGGHPRGT
Trigger: AGTCCCTCTTGGATGCCCACCACTGTCACTGTACCAGCAGATCATGATATACCAAGCTGGCTGATGTTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CGTAGGAGACTTCCAAGTTGCCATCATGTATCTCGTTaGTGGCGCTCACGACGAAGTTGTTCTCTTGAGATT +
Preference number: 6 (lower is better)
Translates to: RRRLPSCHHVSR*WRSRRSCSLEI
Trigger: AATCTCAAGAGAACAACTTCGTCGTGAGCGCCACCAACGAGATACATGATGGCAACTTGGAAGTCTCCTACG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GGGATGATGTTGCCCCTGATATCTTTACAGCCACACTaGTTTTTGTGCACACACGTGTCCTTATTGAGCAGG +
Preference number: 6 (lower is better)
Translates to: GMMLPLISLQPH*FLCTHVSLLSR
Trigger: CCTGCTCAATAAGGACACGTGTGTGCACAAAAACCAGTGTGGCTGTAAAGATATCAGGGGCAACATCATCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CTTCTTGGAGCTGGATTTTATAGCCATAGACGATGGTaGTCACTTCATGCAAGGTTGAACTCCCTTTGGGGG +
Preference number: 6 (lower is better)
Translates to: LLGAGFYSHRRW*SLHARLNSLWG
Trigger: CCCCCAAAGGGAGTTCAACCTTGCATGAAGTGACCACCATCGTCTATGGCTATAAAATCCAGCTCCAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp TATCTCGTTGGTGGCGCTCACGACGAAGTTGTTCTCTaGAGATTTAGACCAGCAAGGCTGGGTCAGTACATA +
Preference number: 6 (lower is better)
Translates to: YLVGGAHDEVVL*RFRPARLGQYI
Trigger: TATGTACTGACCCAGCCTTGCTGGTCTAAATCTCAAGAGAACAACTTCGTCGTGAGCGCCACCAACGAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp TCAAGGATTTTCCAAGCAGCTCCCAGCAGAAGTGAGTaGCCTGCTGGCTTCATGTCTACACGCAAATTGTCA +
Preference number: 6 (lower is better)
Translates to: SRIFQAAPSRSE*PAGFMSTRKLS
Trigger: TGACAATTTGCGTGTAGACATGAAGCCAGCAGGCAACTCACTTCTGCTGGGAGCTGCTTGGAAAATCCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GCATCTTTACAGCCGCACTGTGTTCTGGGCACACATTaGTCCTCACTGAACACAAAGCCATGGTTGCAAAGA +
Preference number: 6 (lower is better)
Translates to: ASLQPHCVLGTH*SSLNTKPWLQR
Trigger: TCTTTGCAACCATGGCTTTGTGTTCAGTGAGGACAAATGTGTGCCCAGAACACAGTGCGGCTGTAAAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp ACTTCATGCAAGGTTGAACTCCCTTTGGGGGATATTTaGTTACGTCCCTCCATGATCAGGGGCTCAATCCCT +
Preference number: 6 (lower is better)
Translates to: TSCKVELPLGDI*LRPSMIRGSIP
Trigger: AGGGATTGAGCCCCTGATCATGGAGGGACGTAACAAAATATCCCCCAAAGGGAGTTCAACCTTGCATGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp CCACTGAGGACACGACATCGAAGTTCCTCTTCTTCTTaGGTCTTCCAGCCAGTGCACATATCCAACATACAG +
Preference number: 6 (lower is better)
Translates to: PLRTRHRSSSSS*VFQPVHISNIQ
Trigger: CTGTATGTTGGATATGTGCACTGGCTGGAAGACCAAAGAAGAAGAGGAACTTCGATGTCGTGTCCTCAGTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp CTTTCTCAAAGTCAATGGGCCTGCATTTTCCATTCATaGTCTCCTGCTGTTCCACTTGGAGGTTCTGCCCTT +
Preference number: 6 (lower is better)
Translates to: LSQSQWACIFHS*SPAVPLGGSAL
Trigger: AAGGGCAGAACCTCCAAGTGGAACAGCAGGAGATCATGAATGGAAAATGCAGGCCCATTGACTTTGAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp TCCATGCTCTTATCTTTCCAGCTATTCATGAACTCCTaGTCATCCTCTGCTAGTTCACCACTGGGTGTCATG +
Preference number: 6 (lower is better)
Translates to: SMLLSFQLFMNS*SSSASSPLGVM
Trigger: CATGACACCCAGTGGTGAACTAGCAGAGGATGAGCAGGAGTTCATGAATAGCTGGAAAGATAAGAGCATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS GCA 72 bp AAGTCAATGGGCCTGCATTTTCCATTCATGATCTCCTaGTGTTCCACTTGGAGGTTCTGCCCTTCGATTTTC +
Preference number: 6 (lower is better)
Translates to: KSMGLHFPFMIS*CSTWRFCPSIF
Trigger: GAAAATCGAAGGGCAGAACCTCCAAGTGGAACAGCAGGAGATCATGAATGGAAAATGCAGGCCCATTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp GGTGTTTCCTCTCATGCCTTCAAACATCAGCCAGCTTaGTATATCATGATCTGCTGGTACAGTGACAGTGGT +
Preference number: 6 (lower is better)
Translates to: GVSSHAFKHQPA*YIMICWYSDSG
Trigger: ACCACTGTCACTGTACCAGCAGATCATGATATACCAAGCTGGCTGATGTTTGAAGGCATGAGAGGAAACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp ACAGGGAGCTATGCTGATGGCATCCACAGCTATTGCTaGCTCTGGTATATTTCCAAACATACCCACTACCAT +
Preference number: 6 (lower is better)
Translates to: TGSYADGIHSYC*LWYISKHTHYH
Trigger: ATGGTAGTGGGTATGTTTGGAAATATACCAGAGCCAGCAATAGCTGTGGATGCCATCAGCATAGCTCCCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CCACGTTCTTCGGTGTTTGCTGTTATCCTAAAGAAGTaGTCTGTGGAGTTGCTGCAGGTTTGTGTCAAGATG +
Preference number: 6 (lower is better)
Translates to: PRSSVFAVILKK*SVELLQVCVKM
Trigger: CATCTTGACACAAACCTGCAGCAACTCCACAGACCACTTCTTTAGGATAACAGCAAACACCGAAGAACGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp TGCTGTTCCACTTGGAGGTTCTGCCCTTCGATTTTCTaGCAATTTGGGTCCATGCTCTTATCTTTCCAGCTA +
Preference number: 6 (lower is better)
Translates to: CCSTWRFCPSIF*QFGSMLLSFQL
Trigger: TAGCTGGAAAGATAAGAGCATGGACCCAAATTGCCAGAAAATCGAAGGGCAGAACCTCCAAGTGGAACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp CCTGCATTTTCCATTCATGATCTCCTGCTGTTCCACTaGGAGGTTCTGCCCTTCGATTTTCTGGCAATTTGG +
Preference number: 6 (lower is better)
Translates to: PAFSIHDLLLFH*EVLPFDFLAIW
Trigger: CCAAATTGCCAGAAAATCGAAGGGCAGAACCTCCAAGTGGAACAGCAGGAGATCATGAATGGAAAATGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 90 bp CGTGTTGGGGTGGCATACTTTGACCAAGATGTAAGTACATGTGTCTaGGATAGGATGGCTATGATCATCAAAGCTCACGATCTGGGAATC +
Preference number: 6 (lower is better)
Translates to: RVGVAYFDQDVSTCV*DRMAMIIKAHDLGI
Trigger: GATTCCCAGATCGTGAGCTTTGATGATCATAGCCATCCTATCCAAGACACATGTACTTACATCTTGGTCAAAGTATGCCACCCCAACACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp GGTAGCACCACCCTTTGGTTGTTCAGCACAACCTTTTaGCCTTTGAACATGGAGATTTTGAGGTCAAAGACC +
Preference number: 6 (lower is better)
Translates to: GSTTLWLFSTTF*PLNMEILRSKT
Trigger: GGTCTTTGACCTCAAAATCTCCATGTTCAAAGGTCAAAAGGTTGTGCTGAACAACCAAAGGGTGGTGCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CCA 72 bp CCATGGTTGTTCTTGTTGCCATGTAAACATACACTCTaGGCAGTAAGACAGGGACTAACACCATCACAAGCA +
Preference number: 6 (lower is better)
Translates to: PWLFLLPCKHTL*AVRQGLTPSQA
Trigger: TGCTTGTGATGGTGTTAGTCCCTGTCTTACTGCCCAGAGTGTATGTTTACATGGCAACAAGAACAACCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp AGAATATGGTTGTGGCTTTCACAAGTGCAGATCTCCTaGCAGTCTGGATTAAACCACTGCTCCTGTAGCTTG +
Preference number: 6 (lower is better)
Translates to: RIWLWLSQVQIS*QSGLNHCSCSL
Trigger: CAAGCTACAGGAGCAGTGGTTTAATCCAGACTGCAAGGAGATCTGCACTTGTGAAAGCCACAACCATATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp ATTTTGGTACAGTTACTGCCTCCATCAACACTGTCCTaGCATTCAGTCCCCAAGGGACACTTGAAATTCCAG +
Preference number: 6 (lower is better)
Translates to: ILVQLLPPSTLS*HSVPKGHLKFQ
Trigger: CTGGAATTTCAAGTGTCCCTTGGGGACTGAATGCAAGGACAGTGTTGATGGAGGCAGTAACTGTACCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS TCA 72 bp ACTGCAGAGAATCACAAAGAGCACGGAAGAGCTCTCTaGATTCACAGAAGCTGTTCATACACTTCAGCAAGA +
Preference number: 6 (lower is better)
Translates to: TAENHKEHGRAL*IHRSCSYTSAR
Trigger: TCTTGCTGAAGTGTATGAACAGCTTCTGTGAATTCAGAGAGCTCTTCCGTGCTCTTTGTGATTCTCTGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2
CDS CAA 72 bp GTGGCATACTTTGACCAAGATGTAAGTACATGTGTCTaGGATAGGATGGCTATGATCATCAAAGCTCACGAT +
Preference number: 6 (lower is better)
Translates to: VAYFDQDVSTCV*DRMAMIIKAHD
Trigger: ATCGTGAGCTTTGATGATCATAGCCATCCTATCCAAGACACATGTACTTACATCTTGGTCAAAGTATGCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000117564.8
ENSMUST00000164178.2